BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAD15f02.sg.3.2
(2357 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA... 729 0.0
gb|CB661504.1|CB661504 OSJNEd04H14.f OSJNEd Oryza sativa (j... 541 e-151
dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA... 507 e-141
gb|CF305161.1|CF305161 ABF1--06-P06.g1 ABF3-overexpressing ... 420 e-114
gb|CB645895.1|CB645895 OSJNEb07P08.f OSJNEb Oryza sativa (j... 379 e-102
gb|CB665684.1|CB665684 OSJNEd12D23.f OSJNEd Oryza sativa (j... 355 7e-095
dbj|AK066793.1| Oryza sativa (japonica cultivar-group) cDNA... 351 1e-093
gb|CB641617.1|CB641617 OSJNEb01F18.f OSJNEb Oryza sativa (j... 323 2e-085
ref|NM_192214.1| Oryza sativa (japonica cultivar-group), p... 250 3e-063
gb|CB640060.1|CB640060 OSJNEa13B23.f OSJNEa Oryza sativa (j... 240 3e-060
gb|CF305082.1|CF305082 ABF1--06-L20.g1 ABF3-overexpressing ... 230 3e-057
gb|CB636065.1|CB636065 OSJNEa01C08.f OSJNEa Oryza sativa (j... 228 1e-056
gb|CB641232.1|CB641232 OSJNEa18F23.f OSJNEa Oryza sativa (j... 228 1e-056
gb|CF304950.1|CF304950 ABF1--06-G01.g1 ABF3-overexpressing ... 228 1e-056
gb|CA754354.1|CA754354 BR040015000_PLATE_B05_34_043.ab1 OA ... 224 2e-055
gb|CF303307.1|CF303307 ABF1--01-O12.g1 ABF3-overexpressing ... 210 3e-051
gb|C74892.1|C74892 C74892 Rice cDNA from immature leaf incl... 208 1e-050
gb|AU031049.1|AU031049 AU031049 Rice cDNA from immature lea... 198 1e-047
gb|CF280407.1|CF280407 14ETL--07-B04.b1 Rice etiolated leaf... 192 6e-046
gb|CB661505.1|CB661505 OSJNEd04H14.r OSJNEd Oryza sativa (j... 188 9e-045
gb|CF281977.1|CF281977 14ETL--09-E10.b1 Rice etiolated leaf... 188 9e-045
gb|CA754616.1|CA754616 BR030003000_PLATE_A11_81_084.ab1 OA ... 178 9e-042
gb|CB645896.1|CB645896 OSJNEb07P08.r OSJNEb Oryza sativa (j... 172 6e-040
gb|CF307385.1|CF307385 HDA1--06-I23.g1 OsHDAC1-overexpressi... 172 6e-040
gb|CB636066.1|CB636066 OSJNEa01C08.r OSJNEa Oryza sativa (j... 163 5e-037
gb|AACV01002170.1| Oryza sativa (japonica cultivar-group) c... 163 5e-037
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 163 5e-037
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 163 5e-037
dbj|AP003378.4| Oryza sativa (japonica cultivar-group) geno... 163 5e-037
dbj|AP003245.4| Oryza sativa (japonica cultivar-group) geno... 163 5e-037
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 163 5e-037
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 163 5e-037
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 163 5e-037
dbj|AG208326.1| Oryza sativa (japonica cultivar-group) DNA,... 159 8e-036
dbj|AG209130.1| Oryza sativa (japonica cultivar-group) DNA,... 159 8e-036
dbj|AG210950.1| Oryza sativa (japonica cultivar-group) DNA,... 159 8e-036
dbj|AG024334.1| Oryza sativa (japonica cultivar-group) DNA,... 159 8e-036
gb|CO436077.1|CO436077 OsMR999 5MT resistant rice mutant cD... 159 8e-036
gb|AC118285.2| Oryza sativa (japonica cultivar-group) chrom... 159 8e-036
gb|AC098833.2| Oryza sativa (japonica cultivar-group) chrom... 159 8e-036
gb|AACV01012651.1| Oryza sativa (japonica cultivar-group) c... 159 8e-036
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 159 8e-036
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 159 8e-036
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 159 8e-036
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 159 8e-036
dbj|AG212353.1| Oryza sativa (japonica cultivar-group) DNA,... 157 3e-035
gb|CB665685.1|CB665685 OSJNEd12D23.r OSJNEd Oryza sativa (j... 157 3e-035
gb|CF281978.1|CF281978 14ETL--09-E10.g1 Rice etiolated leaf... 155 1e-034
dbj|AG207730.1| Oryza sativa (japonica cultivar-group) DNA,... 153 5e-034
gb|CB640397.1|CB640397 OSJNEa14K15.f OSJNEa Oryza sativa (j... 153 5e-034
gb|CB640979.1|CB640979 OSJNEa17E23.f OSJNEa Oryza sativa (j... 141 2e-030
gb|CB659916.1|CB659916 OSJNEd01E04.f OSJNEd Oryza sativa (j... 139 8e-030
dbj|AB155284.1| Oryza sativa (japonica cultivar-group) DNA,... 127 3e-026
gb|CB651810.1|CB651810 OSJNEb16O20.f OSJNEb Oryza sativa (j... 121 2e-024
gb|AU032353.1|AU032353 AU032353 Rice root Oryza sativa (jap... 117 3e-023
gb|CF280408.1|CF280408 14ETL--07-B04.g1 Rice etiolated leaf... 117 3e-023
gb|AU065459.1|AU065459 AU065459 Rice root Oryza sativa (jap... 109 7e-021
gb|AU162551.1|AU162551 AU162551 Rice root Oryza sativa (jap... 107 3e-020
dbj|AG208942.1| Oryza sativa (japonica cultivar-group) DNA,... 86 1e-013
gb|CF303417.1|CF303417 ABF1--02-D06.g1 ABF3-overexpressing ... 86 1e-013
dbj|AG021071.1| Oryza sativa (japonica cultivar-group) DNA,... 82 2e-012
dbj|AG205191.1| Oryza sativa (japonica cultivar-group) DNA,... 82 2e-012
dbj|AG021305.1| Oryza sativa (japonica cultivar-group) DNA,... 78 2e-011
dbj|AG023337.1| Oryza sativa (japonica cultivar-group) DNA,... 78 2e-011
dbj|AB155689.1| Oryza sativa (japonica cultivar-group) DNA,... 64 4e-007
gb|CF303487.1|CF303487 ABF1--02-G09.g1 ABF3-overexpressing ... 62 1e-006
dbj|AG206183.1| Oryza sativa (japonica cultivar-group) DNA,... 56 9e-005
gb|CF303038.1|CF303038 ABF1--01-C16.g1 ABF3-overexpressing ... 54 4e-004
dbj|AG205266.2| Oryza sativa (japonica cultivar-group) DNA,... 52 0.001
dbj|AK072646.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK100898.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
ref|XM_464027.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_506708.1| PREDICTED Oryza sativa (japonica cultivar-... 52 0.001
gb|AQ914645.1|AQ914645 nbeb0049G20f CUGI Rice BAC Library (... 44 0.34
gb|CB651111.1|CB651111 OSJNEb15P07.r OSJNEb Oryza sativa (j... 44 0.34
gb|AC087839.9| Oryza sativa (japonica cultivar-group) chrom... 44 0.34
dbj|AK108426.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.34
dbj|AK111334.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.34
gb|AACV01016570.1| Oryza sativa (japonica cultivar-group) c... 44 0.34
ref|XM_464026.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
ref|XM_478718.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
dbj|AP004270.3| Oryza sativa (japonica cultivar-group) geno... 44 0.34
dbj|AP005195.3| Oryza sativa (japonica cultivar-group) geno... 44 0.34
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.34
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.34
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.34
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.34
>dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052B04, full
insert sequence
Length = 2363
Score = 729 bits (368), Expect = 0.0
Identities = 925/1111 (83%), Gaps = 6/1111 (0%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 380 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 439
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 440 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 499
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 500 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 559
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 560 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 619
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 620 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 679
Query: 665 tagtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaa 724
|| |||||||||||||||| || |||||||| ||||| || || |||| || ||||| |
Sbjct: 680 taataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtga 739
Query: 725 aataccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattg 784
|||| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||
Sbjct: 740 aatatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattg 799
Query: 785 ctgctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgggtttca 844
|||| |||| || ||||||||| || ||||||||| |||| ||||||||||||||||| |
Sbjct: 800 ctgcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgggtttaa 859
Query: 845 agaacttctcgaaatctgccagagaattaatcacacgattacagaagatcgacagtgata 904
|||||||||| ||| |||| || || ||||||||||| | ||||||||||||| ||| |
Sbjct: 860 agaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcgacaatgaca 919
Query: 905 actacccagagacactgtgccggatgtatataattaatgctggccaaggcttcaagatgt 964
||||||||||||| || |||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 920 actacccagagacgttgcgccgcatgtatattattaatgccggccaaggcttcaagatgt 979
Query: 965 tatggagcacaataaaatcattcctcgatccaaaaactgcttccaagatccatgttcttg 1024
|||||||||| ||||||| ||||| ||||| ||||||||||| ||||| |||||||| |
Sbjct: 980 tatggagcactgtaaaatctttcctagatcctaaaactgcttcaaagattcatgttctag 1039
Query: 1025 ggaataagtatcaacataagttgctcgaaataattgacgagtgtgaactgccagaatttc 1084
| | ||||| ||| ||||||| || ||||||||||| ||| |||| ||||||| |||
Sbjct: 1040 gaagcaagtaccaaaataagttacttgaaataattgatgagaatgaattgccagagtttt 1099
Query: 1085 ttggtggcaaatgcaattg------tattgaaggttgccaaagatctgacaaaggtcctt 1138
||||||| |||||||| || ||| ||||||| ||| ||| || ||||||||||
Sbjct: 1100 ttggtggaaaatgcaagtgcgaggcatttggaggttgcaaaaaatcagataaaggtcctt 1159
Query: 1139 ggaaggatcccaacataataaagagagtcctcaatgacgaggcaaactacggcagacaaa 1198
|||||||||| |||||||||||||| ||||| |||| ||| ||||| || || || ||||
Sbjct: 1160 ggaaggatcctaacataataaagagggtcctgaatggcgaagcaaattatgggaggcaaa 1219
Query: 1199 ttgtgaccatatccagcattgatggaaaaataatacgttatgctaggccagatcacccaa 1258
||||||||||||| |||| ||||||||||||||| ||||||||| ||||| | ||||||
Sbjct: 1220 ttgtgaccatatcaagcactgatggaaaaataattcgttatgctgggccacaatacccaa 1279
Query: 1259 ctagaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctc 1318
| |||||||| ||||||| || || |||||||| |||||||||||||||| | || |
Sbjct: 1280 caagaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcac 1339
Query: 1319 ctactgcatcaaggaacctgattacacatcctattttgacccctgttcacgaagagtcaa 1378
||| ||||||||||||||||| ||| |||| |||||||||||||||| || |||||||
Sbjct: 1340 ctatggcatcaaggaacctgataacaaatccccttttgacccctgttcatgaggagtcaa 1399
Query: 1379 aattgtcgccacatggttccacatttgttgctcatgcttctattgaagaaaacattcctg 1438
||||| | ||||||| | |||| || | | | | | ||||||||||| ||||||||
Sbjct: 1400 aattggcagcacatggatttacatctgcttccccttccattattgaagaaagcattcctg 1459
Query: 1439 ttgtagacaaggttgtggatgatggatgggg 1469
|||| ||||||||||||||||||||||||||
Sbjct: 1460 ttgttgacaaggttgtggatgatggatgggg 1490
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 160 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 219
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 220 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 279
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 280 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 339
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 340 agaagaagc 348
Score = 188 bits (95), Expect = 9e-045
Identities = 254/307 (82%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 1697 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 1756
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 1757 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 1816
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 1817 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 1876
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| || || || || |||||||| ||||
Sbjct: 1877 cattagaagccgagttaatctctacaaagaaggctctctatgaagccctgatgcggcagg 1936
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaaagaagttct 1996
| |||||||| ||||||||||||| ||| || |||||||||| ||||||||||| ||||
Sbjct: 1937 acgagctgcttgcgtacattgacaagcaagatatgatcaagtttcgtaaaaagaaattct 1996
Query: 1997 gcttcta 2003
|||||||
Sbjct: 1997 gcttcta 2003
>gb|CB661504.1|CB661504 OSJNEd04H14.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd04H14 5', mRNA sequence
Length = 860
Score = 541 bits (273), Expect = e-151
Identities = 713/860 (82%), Gaps = 6/860 (0%)
Strand = Plus / Plus
Query: 374 gggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattgatgaggatt 433
|||| ||| |||| ||||||| |||||| |||| |||||||| ||| ||||||||||
Sbjct: 1 gggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttgatgaggacc 60
Query: 434 tgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaagcacggaaat 493
|| |||| | |||||| ||||||||||||| ||| | |||||||| |||||||||||||
Sbjct: 61 tgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaagcacggaaat 120
Query: 494 ttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggaggaaggaattcg 553
|||| ||||||||||| ||||||||||||||||| ||| | || ||||| |||||||| |
Sbjct: 121 ttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaaaggaatttg 180
Query: 554 gagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacagagtattacc 613
| | ||||| |||||||| ||||||||||||||| ||||| || | | ||||| |
Sbjct: 181 gggctgacaatatagaggagtttgactacaccgaggcggatgaggttatgaaatattatc 240
Query: 614 cacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtaggaa 673
|||||||||| |||||||| |||||||| ||||| ||| | |||||||| ||| ||||||
Sbjct: 241 cacaattttaccatggagtggataaagaaggaaggcctatctacatagagttaataggaa 300
Query: 674 aagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatg 733
|||||||||| || |||||||| ||||| || || |||| || ||||| ||||| ||||
Sbjct: 301 aagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaatatcatg 360
Query: 734 tcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaa 793
| || || ||||||| |||||||| |||| |||||| || ||| | |||||||| ||||
Sbjct: 361 tgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgctgcaaaaa 420
Query: 794 agcacatagattcgtccactactattttggatgtgcaaggcgtgggtttcaagaacttct 853
|| ||||||||| || ||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 421 ggcccatagattcatctactactattctggacgtgcaaggcgtgggtttaaagaacttct 480
Query: 854 cgaaatctgccagagaattaatcacacgattacagaagatcgacagtgataactacccag 913
| ||| |||| || || ||||||||||| | ||||||||||||| ||| ||||||||||
Sbjct: 481 caaaagctgcaagggatctaatcacacgactgcagaagatcgacaatgacaactacccag 540
Query: 914 agacactgtgccggatgtatataattaatgctggccaaggcttcaagatgttatggagca 973
|||| || |||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 541 agacgttgcgccgcatgtatattattaatgccggccaaggcttcaagatgttatggagca 600
Query: 974 caataaaatcattcctcgatccaaaaactgcttccaagatccatgttcttgggaataagt 1033
| ||||||| ||||| ||||| ||||||||||| |||| |||||||| || | ||||
Sbjct: 601 ctgtaaaatctttcctagatcctaaaactgcttcaaagactcatgttctaggaagcaagt 660
Query: 1034 atcaacataagttgctcgaaataattgacgagtgtgaactgccagaatttcttggtggca 1093
| ||| ||||||| || ||||||||||| ||| |||| ||||||| ||| ||||||| |
Sbjct: 661 accaaaataagttacttgaaataattgatgagaatgaattgccagagttttttggtggaa 720
Query: 1094 aatgcaattg------tattgaaggttgccaaagatctgacaaaggtccttggaaggatc 1147
||||||| || ||| ||||||| ||| ||| || |||||||||||||||||||
Sbjct: 721 aatgcaagtgcgaggcatttggaggttgcaaaaaatcagataaaggtccttggaaggatc 780
Query: 1148 ccaacataataaagagagtcctcaatgacgaggcaaactacggcagacaaattgtgacca 1207
| |||||||||||||| ||||| |||| ||| ||||| || || || |||||||||||
Sbjct: 781 ctaacataataaagagggtcctgaatggcgaagcaaattatgggagggcaattgtgacca 840
Query: 1208 tatccagcattgatggaaaa 1227
|||| |||| ||||||||||
Sbjct: 841 tatcaagcactgatggaaaa 860
>dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F02, full
insert sequence
Length = 1673
Score = 507 bits (256), Expect = e-141
Identities = 663/799 (82%), Gaps = 6/799 (0%)
Strand = Plus / Plus
Query: 677 ttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtca 736
||||||| || |||||||| ||||| || || |||| || ||||| ||||| ||||| |
Sbjct: 1 ttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaatatcatgtga 60
Query: 737 aagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaaagc 796
| || ||||||| |||||||| |||| |||||| || ||| | |||||||| |||| ||
Sbjct: 61 aggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgctgcaaaaaggc 120
Query: 797 acatagattcgtccactactattttggatgtgcaaggcgtgggtttcaagaacttctcga 856
||||||||| || ||||||||| |||| ||||||||||||||||| ||||||||||| |
Sbjct: 121 ccatagattcatctactactattctggacgtgcaaggcgtgggtttaaagaacttctcaa 180
Query: 857 aatctgccagagaattaatcacacgattacagaagatcgacagtgataactacccagaga 916
|| |||| || || ||||||||||| | ||||||||||||| ||| |||||||||||||
Sbjct: 181 aagctgcaagggatctaatcacacgactgcagaagatcgacaatgacaactacccagaga 240
Query: 917 cactgtgccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaa 976
| || |||| |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 241 cgttgcgccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactg 300
Query: 977 taaaatcattcctcgatccaaaaactgcttccaagatccatgttcttgggaataagtatc 1036
||||||| ||||| ||||| ||||||||||| ||||| |||||||| || | ||||| |
Sbjct: 301 taaaatctttcctagatcctaaaactgcttcaaagattcatgttctaggaagcaagtacc 360
Query: 1037 aacataagttgctcgaaataattgacgagtgtgaactgccagaatttcttggtggcaaat 1096
|| ||||||| || ||||||||||| ||| |||| ||||||| ||| ||||||| ||||
Sbjct: 361 aaaataagttacttgaaataattgatgagaatgaattgccagagttttttggtggaaaat 420
Query: 1097 gcaattg------tattgaaggttgccaaagatctgacaaaggtccttggaaggatccca 1150
|||| || ||| ||||||| ||| ||| || |||||||||||||||||||| |
Sbjct: 421 gcaagtgcgaggcatttggaggttgcaaaaaatcagataaaggtccttggaaggatccta 480
Query: 1151 acataataaagagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatat 1210
||||||||||||| ||||| |||| ||| ||||| || || || ||||||||||||||||
Sbjct: 481 acataataaagagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatat 540
Query: 1211 ccagcattgatggaaaaataatacgttatgctaggccagatcacccaactagaaaaggga 1270
| |||| ||||||||||||||| ||||||||| ||||| | ||||||| |||||||| |
Sbjct: 541 caagcactgatggaaaaataattcgttatgctgggccacaatacccaacaagaaaaggaa 600
Query: 1271 gtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcctactgcatcaa 1330
|||||| || || |||||||| |||||||||||||||| | || |||| |||||||
Sbjct: 601 gtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacctatggcatcaa 660
Query: 1331 ggaacctgattacacatcctattttgacccctgttcacgaagagtcaaaattgtcgccac 1390
|||||||||| || |||| |||||||||||||||| || |||||||||||| | |||
Sbjct: 661 ggaacctgataacgaatccccttttgacccctgttcatgaggagtcaaaattggcagcac 720
Query: 1391 atggttccacatttgttgctcatgcttctattgaagaaaacattcctgttgtagacaagg 1450
|||| | |||| || | | | | | ||||||||||| |||||||||||| |||||||
Sbjct: 721 atggatttacatctgcttccccttccattattgaagaaagcattcctgttgttgacaagg 780
Query: 1451 ttgtggatgatggatgggg 1469
|||||||||||||||||||
Sbjct: 781 ttgtggatgatggatgggg 799
Score = 188 bits (95), Expect = 9e-045
Identities = 254/307 (82%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 1007 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 1066
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 1067 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 1126
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 1127 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 1186
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| || || || || |||||||| ||||
Sbjct: 1187 cattagaagccgagttaatctctacaaagaaggctctctatgaagccctgatgcggcagg 1246
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaaagaagttct 1996
| |||||||| ||||||||||||| ||| || |||||||||| ||||||||||| ||||
Sbjct: 1247 acgagctgcttgcgtacattgacaagcaagatatgatcaagtttcgtaaaaagaaattct 1306
Query: 1997 gcttcta 2003
|||||||
Sbjct: 1307 gcttcta 1313
>gb|CF305161.1|CF305161 ABF1--06-P06.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--06-P06, mRNA sequence
Length = 605
Score = 420 bits (212), Expect = e-114
Identities = 497/592 (83%)
Strand = Plus / Plus
Query: 383 aagagcttcaagatgttgagacattccgacaatgcttaattgatgaggatttgctgccac 442
|||| ||||||| |||||| |||| |||||||| ||| |||||||||| || |||| |
Sbjct: 13 aagatcttcaagctgttgatgcatttcgacaatgtttagttgatgaggacctgttgccgc 72
Query: 443 cacagcacgatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttg 502
|||||| ||||||||||||| ||| | |||||||| ||||||||||||||||| ||||
Sbjct: 73 aacagcatgatgattatcacacaatgcttaggttcctcaaagcacggaaatttgatgttg 132
Query: 503 agaaagctaagagtatgtggtcagacatgatcaattggaggaaggaattcggagtcgaca 562
||||||| ||||||||||||||||| ||| | || ||||| |||||||| || | ||||
Sbjct: 133 agaaagcaaagagtatgtggtcagatatgcttaaatggagaaaggaatttggggctgaca 192
Query: 563 aaatagaggaatttgactacaccgagttagatgaagtgacagagtattacccacaatttt 622
| |||||||| ||||||||||||||| ||||| || | | ||||| ||||||||||
Sbjct: 193 atatagaggagtttgactacaccgaggcggatgaggttatgaaatattatccacaatttt 252
Query: 623 atcatggagtagataaagagggaagacctgtatacatagaattagtaggaaaagttgatg 682
| |||||||| |||||||| ||||| ||| | |||||||| ||| |||||||||||||||
Sbjct: 253 accatggagtggataaagaaggaaggcctatctacatagagttaataggaaaagttgatg 312
Query: 683 caaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaagaat 742
| || |||||||| ||||| || || |||| || ||||| ||||| ||||| || || |
Sbjct: 313 cgaataagctaatgcaagtaactactatagagcgatatgtgaaatatcatgtgaaggagt 372
Query: 743 ttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaaagcacatag 802
|||||| |||||||| |||| |||||| || ||| | |||||||| |||| || |||||
Sbjct: 373 ttgagagatgcttccaaatgagatttcctgcctgctcgattgctgcaaaaaggcccatag 432
Query: 803 attcgtccactactattttggatgtgcaaggcgtgggtttcaagaacttctcgaaatctg 862
|||| || ||||||||| |||| ||||||||||||||||| ||||||||||| ||| |||
Sbjct: 433 attcatctactactattctggacgtgcaaggcgtgggtttaaagaacttctcaaaagctg 492
Query: 863 ccagagaattaatcacacgattacagaagatcgacagtgataactacccagagacactgt 922
| || || ||||||||||| | ||||||||||||| ||| |||||||||||||| ||
Sbjct: 493 caagggatctaatcacacgactgcagaagatcgacaatgacaactacccagagacgttgc 552
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcac 974
|||| |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 553 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcac 604
>gb|CB645895.1|CB645895 OSJNEb07P08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07P08 5', mRNA sequence
Length = 840
Score = 379 bits (191), Expect = e-102
Identities = 476/571 (83%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 269 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 328
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 329 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 388
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 389 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 448
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 449 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 508
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 509 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 568
Query: 665 tagtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaa 724
|| |||||||||||||||| || |||||||| ||||| || || |||| || ||||| |
Sbjct: 569 taataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtga 628
Query: 725 aataccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattg 784
|||| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||
Sbjct: 629 aatatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattg 688
Query: 785 ctgctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgggtttca 844
|||| |||| || ||||||||| || ||||||||| |||| ||||||||||||||||| |
Sbjct: 689 ctgcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgggtttaa 748
Query: 845 agaacttctcgaaatctgccagagaattaatcacacgattacagaagatcgacagtgata 904
|||||||||| ||| |||| || || ||||||||||| | ||||||||||||| ||| |
Sbjct: 749 agaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcgacaatgaca 808
Query: 905 actacccagagacactgtgccggatgtatat 935
||||||||||||| || |||| ||||||||
Sbjct: 809 actacccagagacgttgcgccgcatgtatat 839
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 49 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 108
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 109 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 168
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 169 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 228
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 229 agaagaagc 237
>gb|CB665684.1|CB665684 OSJNEd12D23.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12D23 5', mRNA sequence
Length = 849
Score = 355 bits (179), Expect = 7e-095
Identities = 452/543 (83%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 307 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 366
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 367 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 426
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 427 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 486
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 487 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 546
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 547 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 606
Query: 665 tagtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaa 724
|| |||||||||||||||| || |||||||| ||||| || || |||| || ||||| |
Sbjct: 607 taataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtga 666
Query: 725 aataccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattg 784
|||| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||
Sbjct: 667 aatatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattg 726
Query: 785 ctgctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgggtttca 844
|||| |||| || ||||||||| || ||||||||| |||| ||||||||||||||||| |
Sbjct: 727 ctgcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgggtttaa 786
Query: 845 agaacttctcgaaatctgccagagaattaatcacacgattacagaagatcgacagtgata 904
|||||||||| ||| |||| || || ||||||||||| | ||||||||||||| ||| |
Sbjct: 787 agaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcgacaatgaca 846
Query: 905 act 907
|||
Sbjct: 847 act 849
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 87 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 146
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 147 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 206
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 207 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 266
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 267 agaagaagc 275
>dbj|AK066793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084O22, full
insert sequence
Length = 2201
Score = 351 bits (177), Expect = 1e-093
Identities = 531/649 (81%)
Strand = Plus / Plus
Query: 451 gatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaagct 510
|||||||||||| ||||||| |||||||| ||||| || |||||||| |||| |||||
Sbjct: 552 gatgattatcacgtgatgttgaggttcctgaaagcgcgaaaatttgatattgataaagca 611
Query: 511 aagagtatgtggtcagacatgatcaattggaggaaggaattcggagtcgacaaaatagag 570
|| ||||||||| || ||| | | ||||||||||| ||||| | ||||| ||||||
Sbjct: 612 aaacatatgtggtcggaaatgcttagatggaggaaggagttcggggctgacaacatagag 671
Query: 571 gaatttgactacaccgagttagatgaagtgacagagtattacccacaattttatcatgga 630
||||||||||| | ||| |||||||| || |||| || ||||||||||| |||||
Sbjct: 672 gaatttgactatagcgaattagatgatgttctggagtgctatccacaattttaccatggt 731
Query: 631 gtagataaagagggaagacctgtatacatagaattagtaggaaaagttgatgcaaacaag 690
|| |||||||||||||| ||||| ||||||||| || | |||||||||||| | |||||
Sbjct: 732 gtggataaagagggaaggcctgtctacatagaactaattggaaaagttgatcccaacaaa 791
Query: 691 ctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaagaatttgagaag 750
|| ||||||| ||||| | || | |||||||| || |||||||| || | ||||||
Sbjct: 792 ttagtacaagtcacaactattgacagatatgtaaagtatcatgtcaaggagtccgagaag 851
Query: 751 tgcttccagatgaaatttccagcttgcaccattgctgctaaaaagcacatagattcgtcc 810
||||| ||||||| |||||||||||| |||||||||| |||| |||||||||||||| |
Sbjct: 852 tgcttgcagatgaggtttccagcttgctccattgctgcaaaaaggcacatagattcgtgc 911
Query: 811 actactattttggatgtgcaaggcgtgggtttcaagaacttctcgaaatctgccagagaa 870
| |||||| |||||||||||||| |||||||| ||||||||||| ||| ||| |||||
Sbjct: 912 agtactatcttggatgtgcaaggagtgggtttgaagaacttctcaaaagatgcaagagag 971
Query: 871 ttaatcacacgattacagaagatcgacagtgataactacccagagacactgtgccggatg 930
|||||| ||| | ||||||||| ||| ||| ||||| |||||||| || ||| ||
Sbjct: 972 ctaatcatgcgacttcagaagatcaacaatgacaactatccagagaccttgcaccgattg 1031
Query: 931 tatataattaatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctc 990
|| || || |||||||||||||||||||||||||||||| | |||||||||||||| ||
Sbjct: 1032 tacattataaatgctggccaaggcttcaagatgttatggggtacaataaaatcatttctt 1091
Query: 991 gatccaaaaactgcttccaagatccatgttcttgggaataagtatcaacataagttgctc 1050
|||||| |||||||||| ||||| ||||| ||||| | || || ||| ||||| | ||
Sbjct: 1092 gatccacaaactgcttcgaagattcatgtccttggaagcaaataccaaaataagctactt 1151
Query: 1051 gaaataattgacgagtgtgaactgccagaatttcttggtggcaaatgca 1099
|||| ||||| ||| ||||||| ||||| ||||| |||||||||||||
Sbjct: 1152 gaaactattgatgagagtgaacttccagattttctgggtggcaaatgca 1200
Score = 67.9 bits (34), Expect = 2e-008
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaagagagtcct 1169
||||||| |||||| || |||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1217 aggttgcataagatcagataaaggtccttggaaggatcctgacataataaagagggtcct 1276
Query: 1170 caatgacgaggcaaacta 1187
|||| || ||||||||
Sbjct: 1277 taatggtgaagcaaacta 1294
>gb|CB641617.1|CB641617 OSJNEb01F18.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01F18 5', mRNA sequence
Length = 810
Score = 323 bits (163), Expect = 2e-085
Identities = 406/487 (83%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 288 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 347
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 348 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 407
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 408 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 467
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 468 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 527
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 528 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 587
Query: 665 tagtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaa 724
|| |||||||||||||||| || |||||||| ||||| || || |||| || ||||| |
Sbjct: 588 taataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtga 647
Query: 725 aataccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattg 784
|||| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||
Sbjct: 648 aatatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattg 707
Query: 785 ctgctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgggtttca 844
|||| |||| || ||||||||| || ||||||||| |||| ||||||||||||||||| |
Sbjct: 708 ctgcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgggtttaa 767
Query: 845 agaactt 851
|||||||
Sbjct: 768 agaactt 774
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 68 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 127
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 128 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 187
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 188 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 247
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 248 agaagaagc 256
>ref|NM_192214.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1479
Score = 250 bits (126), Expect = 3e-063
Identities = 381/466 (81%)
Strand = Plus / Plus
Query: 451 gatgattatcacatgatgttaaggttcctaaaagcacggaaatttgaagttgagaaagct 510
|||||||||||| ||||||| |||||||| ||||| || |||||||| |||| |||||
Sbjct: 421 gatgattatcacgtgatgttgaggttcctgaaagcgcgaaaatttgatattgataaagca 480
Query: 511 aagagtatgtggtcagacatgatcaattggaggaaggaattcggagtcgacaaaatagag 570
|| ||||||||| || ||| | | ||||||||||| ||||| | ||||| ||||||
Sbjct: 481 aaacatatgtggtcggaaatgcttagatggaggaaggagttcggggctgacaacatagag 540
Query: 571 gaatttgactacaccgagttagatgaagtgacagagtattacccacaattttatcatgga 630
||||||||||| | ||| |||||||| || |||| || ||||||||||| |||||
Sbjct: 541 gaatttgactatagcgaattagatgatgttctggagtgctatccacaattttaccatggt 600
Query: 631 gtagataaagagggaagacctgtatacatagaattagtaggaaaagttgatgcaaacaag 690
|| |||||||||||||| ||||| ||||||||| || | |||||||||||| | |||||
Sbjct: 601 gtggataaagagggaaggcctgtctacatagaactaattggaaaagttgatcccaacaaa 660
Query: 691 ctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaaagaatttgagaag 750
|| ||||||| ||||| | || | |||||||| || |||||||| || | ||||||
Sbjct: 661 ttagtacaagtcacaactattgacagatatgtaaagtatcatgtcaaggagtccgagaag 720
Query: 751 tgcttccagatgaaatttccagcttgcaccattgctgctaaaaagcacatagattcgtcc 810
||||| ||||||| |||||||||||| |||||||||| |||| |||||||||||||| |
Sbjct: 721 tgcttgcagatgaggtttccagcttgctccattgctgcaaaaaggcacatagattcgtgc 780
Query: 811 actactattttggatgtgcaaggcgtgggtttcaagaacttctcgaaatctgccagagaa 870
| |||||| |||||||||||||| |||||||| ||||||||||| ||| ||| |||||
Sbjct: 781 agtactatcttggatgtgcaaggagtgggtttgaagaacttctcaaaagatgcaagagag 840
Query: 871 ttaatcacacgattacagaagatcgacagtgataactacccagaga 916
|||||| ||| | ||||||||| ||| ||| ||||| |||||||
Sbjct: 841 ctaatcatgcgacttcagaagatcaacaatgacaactatccagaga 886
Score = 127 bits (64), Expect = 3e-026
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 973 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 1032
Query: 1000 actgcttccaagatccatgttcttgggaataagtatcaacataagttgctcgaaataatt 1059
|||||||| ||||| ||||| ||||| | || || ||| ||||| | || |||| |||
Sbjct: 1033 actgcttcgaagattcatgtccttggaagcaaataccaaaataagctacttgaaactatt 1092
Query: 1060 gacgagtgtgaactgccagaatttcttggtggcaaatgca 1099
|| ||| ||||||| ||||| ||||| |||||||||||||
Sbjct: 1093 gatgagagtgaacttccagattttctgggtggcaaatgca 1132
>gb|CB640060.1|CB640060 OSJNEa13B23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13B23 5', mRNA sequence
Length = 628
Score = 240 bits (121), Expect = 3e-060
Identities = 283/337 (83%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 276 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 335
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 336 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 395
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 396 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 455
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 456 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 515
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 516 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 575
Query: 665 tagtaggaaaagttgatgcaaacaagctaatacaagt 701
|| |||||||||||||||| || |||||||| |||||
Sbjct: 576 taataggaaaagttgatgcgaataagctaatgcaagt 612
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 56 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 115
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 116 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 175
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 176 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 235
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 236 agaagaagc 244
>gb|CF305082.1|CF305082 ABF1--06-L20.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--06-L20, mRNA sequence
Length = 527
Score = 230 bits (116), Expect = 3e-057
Identities = 368/452 (81%)
Strand = Plus / Plus
Query: 464 tgatgttaaggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggt 523
||||||| |||||||| ||||| || |||||||| |||| ||||| || ||||||||
Sbjct: 13 tgatgttgaggttcctgaaagcgcgaaaatttgatattgataaagcaaaacatatgtggt 72
Query: 524 cagacatgatcaattggaggaaggaattcggagtcgacaaaatagaggaatttgactaca 583
| || ||| | | ||||||||||| ||||| | ||||| ||||||||||||||||| |
Sbjct: 73 cggaaatgcttagatggaggaaggagttcggggctgacaacatagaggaatttgactata 132
Query: 584 ccgagttagatgaagtgacagagtattacccacaattttatcatggagtagataaagagg 643
||| |||||||| || |||| || ||||||||||| ||||| || ||||||||||
Sbjct: 133 gcgaattagatgatgttctggagtgctatccacaattttaccatggtgtggataaagagg 192
Query: 644 gaagacctgtatacatagaattagtaggaaaagttgatgcaaacaagctaatacaagtga 703
|||| ||||| ||||||||| || | |||||||||||| | ||||| || ||||||| |
Sbjct: 193 gaaggcctgtctacatagaactaattggaaaagttgatcccaacaaattagtacaagtca 252
Query: 704 caaccctagatcggtatgtaaaataccatgtcaaagaatttgagaagtgcttccagatga 763
|||| | || | |||||||| || |||||||| || | ||||||||||| |||||||
Sbjct: 253 caactattgacagatatgtaaagtatcatgtcaaggagtccgagaagtgcttgcagatga 312
Query: 764 aatttccagcttgcaccattgctgctaaaaagcacatagattcgtccactactattttgg 823
|||||||||||| |||||||||| |||| |||||||||||||| || |||||| ||||
Sbjct: 313 ggtttccagcttgctccattgctgcaaaaaggcacatagattcgtgcagtactatcttgg 372
Query: 824 atgtgcaaggcgtgggtttcaagaacttctcgaaatctgccagagaattaatcacacgat 883
|||||||||| |||||||| ||||||||||| ||| ||| ||||| |||||| |||
Sbjct: 373 atgtgcaaggagtgggtttgaagaacttctcaaaagatgcaagagagctaatcatgcgac 432
Query: 884 tacagaagatcgacagtgataactacccagag 915
| ||||||||| ||| ||| ||||| ||||||
Sbjct: 433 ttcagaagatcaacaatgacaactatccagag 464
Score = 56.0 bits (28), Expect = 9e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 940 aatgctggccaaggcttcaagatgttat 967
||||||||||||||||||||||||||||
Sbjct: 500 aatgctggccaaggcttcaagatgttat 527
>gb|CB636065.1|CB636065 OSJNEa01C08.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01C08 5', mRNA sequence
Length = 591
Score = 228 bits (115), Expect = 1e-056
Identities = 268/319 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 268 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 327
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 328 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 387
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 388 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 447
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 448 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 507
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 508 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 567
Query: 665 tagtaggaaaagttgatgc 683
|| ||||||||||||||||
Sbjct: 568 taataggaaaagttgatgc 586
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 48 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 107
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 108 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 167
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 168 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 227
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 228 agaagaagc 236
>gb|CB641232.1|CB641232 OSJNEa18F23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa18F23 5', mRNA sequence
Length = 594
Score = 228 bits (115), Expect = 1e-056
Identities = 268/319 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 275 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 334
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 335 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 394
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 395 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 454
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 455 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 514
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 515 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 574
Query: 665 tagtaggaaaagttgatgc 683
|| ||||||||||||||||
Sbjct: 575 taataggaaaagttgatgc 593
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 55 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 114
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 115 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 174
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 175 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 234
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 235 agaagaagc 243
>gb|CF304950.1|CF304950 ABF1--06-G01.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--06-G01, mRNA sequence
Length = 404
Score = 228 bits (115), Expect = 1e-056
Identities = 268/319 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 86 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 145
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 146 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 205
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 206 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 265
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 266 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 325
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
| ||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 326 aatattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 385
Query: 665 tagtaggaaaagttgatgc 683
|| ||||||||||||||||
Sbjct: 386 taataggaaaagttgatgc 404
Score = 58.0 bits (29), Expect = 2e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 289 attaatgcggggaacaaattcaggcattccttgagaaggagaagc 333
|||||||| ||||||||||||||||||||| |||| || ||||||
Sbjct: 10 attaatgccgggaacaaattcaggcattccctgaggagaagaagc 54
>gb|CA754354.1|CA754354 BR040015000_PLATE_B05_34_043.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040015000_PLATE_B05_34_043.ab1 similar to putative
SEC14 - like protein [Oryza sativa (japonica
cultivar-group)] gi|20804586|dbj|BAB92277.1| (AP003245)
putative SEC14 - like protein [Oryza sativa (japonica
cultivar-group)], mRNA sequence
Length = 628
Score = 224 bits (113), Expect = 2e-055
Identities = 276/331 (83%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 276 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 335
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 336 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 395
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
|||||| |||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 396 cacgganatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 455
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||||||||||| ||||| || |
Sbjct: 456 aggaatttggggctgacaatatagaggagtttgactacaccgaggcggatgaggttatga 515
Query: 605 agtattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaat 664
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |
Sbjct: 516 natattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagt 575
Query: 665 tagtaggaaaagttgatgcaaacaagctaat 695
|| |||||||||||||||| || ||||||||
Sbjct: 576 taataggaaaagttgatgcgaataagctaat 606
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 56 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 115
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 116 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 175
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 176 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 235
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 236 agaagaagc 244
>gb|CF303307.1|CF303307 ABF1--01-O12.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--01-O12, mRNA sequence
Length = 660
Score = 210 bits (106), Expect = 3e-051
Identities = 282/338 (83%), Gaps = 2/338 (0%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 292 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 351
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||||| ||||
Sbjct: 352 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcctcaaag 411
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| ||| | || ||||| |
Sbjct: 412 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatggagaa 471
Query: 545 aggaattcggagtcgacaaaatagaggaatttgactacaccgagttagatgaagtgacag 604
||||||| || | ||||| |||||||| ||||||| ||||||| ||||| || |
Sbjct: 472 aggaatttggggctgacaatatagaggagtttgact-caccgaggcggatgaggttatga 530
Query: 605 agtattacccacaattt-tatcatggagtagataaagagggaagacctgtatacatagaa 663
| ||||| ||||||||| || |||||||| |||||||| ||||| ||| | ||||||||
Sbjct: 531 aatattatccacaatttntaccatggagtggataaagaaggaaggcctatctacatagag 590
Query: 664 ttagtaggaaaagttgatgcaaacaagctaatacaagt 701
||| |||||||||||||||| || |||||||| |||||
Sbjct: 591 ttaataggaaaagttgatgcgaataagctaatgcaagt 628
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 72 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 131
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 132 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 191
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 192 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 251
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 252 agaagaagc 260
>gb|C74892.1|C74892 C74892 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E60667_1A,
mRNA sequence
Length = 400
Score = 208 bits (105), Expect = 1e-050
Identities = 295/355 (83%), Gaps = 3/355 (0%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaagagagtcct 1169
||||||| ||| ||| || |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 46 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaagagggtcct 105
Query: 1170 caatgacgaggcaaactacggcagacaaattgtgaccatatccagcattgatggaaaaat 1229
|||| ||| |||| || || || ||||||||||||||||| |||| ||||||||||||
Sbjct: 106 gaatggcgaa-caaattatgggaggcaaattgtgaccatatcaagcactgatggaaaaat 164
Query: 1230 aatacgttatgctaggccagatcacccaactagaaaagggagtgatgcatctgccgagtc 1289
||| ||||||||| ||||| | ||||||| |||||||| ||||||| || || |||||
Sbjct: 165 aattcgttatgctgggccacaatacccaacaagaaaaggaagtgatggctcagcggagtc 224
Query: 1290 tggatctgaagtggaagatgtaacatctcctactgcatcaaggaacctgattacacatcc 1349
||| |||||||||||||||| | || |||| ||||||||||||||||| ||| ||||
Sbjct: 225 tgggtctgaagtggaagatggcgcgtcacctatggcatcaaggaacctgataacaaatcc 284
Query: 1350 tattttgacccctgttcacgaagagtcaaaattgtcgccacatggttccacatttg-ttg 1408
|||||||||||||||| | |||||||||||| | ||||||| | |||| || ||
Sbjct: 285 ccttttgacccctgttcatnaggagtcaaaattggcagcacatggatttacatctgcttc 344
Query: 1409 ctcatgcttctattga-agaaaacattcctgttgtagacaaggttgtggatgatg 1462
| | | | | |||||| ||||| ||||||||| || |||||||||||||||||||
Sbjct: 345 cccttccatttattgaaagaaagcattcctgtngttgacaaggttgtggatgatg 399
>gb|AU031049.1|AU031049 AU031049 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E60684_5A,
mRNA sequence
Length = 384
Score = 198 bits (100), Expect = 1e-047
Identities = 217/255 (85%), Gaps = 1/255 (0%)
Strand = Plus / Plus
Query: 1129 aaaggtccttggaaggatcccaacataataaagagagtcctcaatgacgaggcaaactac 1188
|||||||||||||||||||| |||||||||||||| ||||| |||| ||| |||| ||
Sbjct: 66 aaaggtccttggaaggatcctaacataataaagagggtcctgaatggcgaa-caaattat 124
Query: 1189 ggcagacaaattgtgaccatatccagcattgatggaaaaataatacgttatgctaggcca 1248
|| | ||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||
Sbjct: 125 gggangcaaattgtgaccatatcaagcactgatggaaaaataattcgttatgctgggcca 184
Query: 1249 gatcacccaactagaaaagggagtgatgcatctgccgagtctggatctgaagtggaagat 1308
| ||||||| |||||||| ||||||| || || |||||||| |||||||||||||||
Sbjct: 185 caatacccaacaagaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagat 244
Query: 1309 gtaacatctcctactgcatcaaggaacctgattacacatcctattttgacccctgttcac 1368
| | || |||| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 245 ggcgcgtcacctatggcatcaaggaacctgataacaaatccccttttgacccctgttcat 304
Query: 1369 gaagagtcaaaattg 1383
|| ||||||||||||
Sbjct: 305 gaggagtcaaaattg 319
>gb|CF280407.1|CF280407 14ETL--07-B04.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-B04, mRNA sequence
Length = 506
Score = 192 bits (97), Expect = 6e-046
Identities = 166/189 (87%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatgctttgaagggtttgtacataac 204
||||||||||| || ||||| |||||||| |||||||| |||||||| ||| |||||
Sbjct: 87 gggatgtcaggaccactcgatcgatttgccaggccatgttttgaaggttttacgcataat 146
Query: 205 gatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaagactaag 264
||||||| |||||||| ||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 147 gatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaagactaaa 206
Query: 265 attgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattccttgaga 324
||||| |||||||||||||| || |||||||| ||||||||||||||||||||| ||||
Sbjct: 207 attggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattccctgagg 266
Query: 325 aggagaagc 333
|| ||||||
Sbjct: 267 agaagaagc 275
Score = 101 bits (51), Expect = 2e-018
Identities = 160/191 (83%), Gaps = 4/191 (2%)
Strand = Plus / Plus
Query: 365 aggacataaggg-acgttaaagagcttcaagatgttgagacattccgacaatgcttaatt 423
|||||||||||| | ||| |||| ||||||| |||||| |||| |||||||| ||| ||
Sbjct: 308 aggacataaggggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagtt 367
Query: 424 gatgaggatttgctgccaccacagcacgatgattatcacatgat-gttaaggttcctaaa 482
|||||||| || |||| | |||||| ||||||||||||| || | | |||||||| ||
Sbjct: 368 gatgaggacctgttgccgcaacagcatgatgattatcacacaatggcttaggttcctcaa 427
Query: 483 agcacggaaa-tttgaagttgagaaagctaagagta-tgtggtcagacatgatcaattgg 540
|||||||||| ||||| ||||||||||| ||||||| |||||||||| ||| | || |||
Sbjct: 428 agcacggaaattttgatgttgagaaagcaaagagtattgtggtcagatatgcttaaatgg 487
Query: 541 aggaaggaatt 551
|| ||||||||
Sbjct: 488 agaaaggaatt 498
>gb|CB661505.1|CB661505 OSJNEd04H14.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd04H14 3', mRNA sequence
Length = 828
Score = 188 bits (95), Expect = 9e-045
Identities = 254/307 (82%)
Strand = Plus / Minus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 597 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 538
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 537 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 478
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 477 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 418
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| || || || || |||||||| ||||
Sbjct: 417 cattagaagccgagttaatctctacaaagaaggctctctatgaagccctgatgcggcagg 358
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaaagaagttct 1996
| |||||||| ||||||||||||| ||| || |||||||||| ||||||||||| ||||
Sbjct: 357 acgagctgcttgcgtacattgacaagcaagatatgatcaagtttcgtaaaaagaaattct 298
Query: 1997 gcttcta 2003
|||||||
Sbjct: 297 gcttcta 291
Score = 50.1 bits (25), Expect = 0.006
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1445 acaaggttgtggatgatggatgggg 1469
|||||||||||||||||||||||||
Sbjct: 828 acaaggttgtggatgatggatgggg 804
>gb|CF281977.1|CF281977 14ETL--09-E10.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-E10, mRNA sequence
Length = 642
Score = 188 bits (95), Expect = 9e-045
Identities = 254/307 (82%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 164 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 223
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 224 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 283
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 284 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 343
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| || || || || |||||||| ||||
Sbjct: 344 cattagaagccgagttaatctctacaaagaaggctctctatgaagccctgatgcggcagg 403
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaaagaagttct 1996
| |||||||| ||||||||||||| ||| || |||||||||| ||||||||||| ||||
Sbjct: 404 acgagctgcttgcgtacattgacaagcaagatatgatcaagtttcgtaaaaagaaattct 463
Query: 1997 gcttcta 2003
|||||||
Sbjct: 464 gcttcta 470
>gb|CA754616.1|CA754616 BR030003000_PLATE_A11_81_084.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030003000_PLATE_A11_81_084.ab1 similar to (AF367433)
phosphatidylinositol transfer-like protein III [Lotus,
mRNA sequence
Length = 651
Score = 178 bits (90), Expect = 9e-042
Identities = 252/307 (82%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 238 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 297
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 298 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 357
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 358 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 417
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| || || || || |||||||| ||||
Sbjct: 418 cattagaagccgagttaatctctacnaagaaggctctctatgaagccctgatgcggcagg 477
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaaagaagttct 1996
| |||||||| |||||||||||| ||| || ||||| |||| ||||||||||| ||||
Sbjct: 478 acgagctgcttgcgtacattgacnagcaagatatgatcnagtttcgtaaaaagaaattct 537
Query: 1997 gcttcta 2003
|||||||
Sbjct: 538 gcttcta 544
Score = 54.0 bits (27), Expect = 4e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1439 ttgtagacaaggttgtggatgatggatgggg 1469
|||| ||||||||||||||||||||||||||
Sbjct: 1 ttgttgacaaggttgtggatgatggatgggg 31
>gb|CB645896.1|CB645896 OSJNEb07P08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07P08 3', mRNA sequence
Length = 745
Score = 172 bits (87), Expect = 6e-040
Identities = 252/307 (82%)
Strand = Plus / Minus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||| ||| ||||| || || || ||||| || ||||
Sbjct: 648 acaaggaagaattccggccaccgtctcatgctccgtcttatactgaaaaggatgtcctct 589
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 588 catctatggtaagacgcctaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 529
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| |||||| |||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 528 catccgaggtgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 469
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| || || || || |||||||| ||||
Sbjct: 468 cattagaagccgagttaatctctacaaagaaggctctctatgaagccctgatgcggcagg 409
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaaagaagttct 1996
| |||||||| ||||||||||||| ||| || |||||||||| ||||||||||| ||||
Sbjct: 408 acgagctgcttgcgtacattgacaagcaagatatgatcaagtttcgtaaaaagaaattct 349
Query: 1997 gcttcta 2003
|||||||
Sbjct: 348 gcttcta 342
>gb|CF307385.1|CF307385 HDA1--06-I23.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-I23, mRNA sequence
Length = 648
Score = 172 bits (87), Expect = 6e-040
Identities = 159/183 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 452 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 511
Query: 897 cagtgataactacccagagacactgtgccggatgtatataattaatgctggccaaggctt 956
|| ||| |||||||||||||| || |||| |||||||| |||||||| |||||||||||
Sbjct: 512 caatgacaactacccagagacgttgcgccgcatgtatattattaatgccggccaaggctt 571
Query: 957 caagatgttatggagcacaataaaatcattcctcgatccaaaaactgcttccaagatcca 1016
|||||||||||||||||| ||||||| ||||| ||||| ||||||||||| ||||| ||
Sbjct: 572 caagatgttatggagcactgtaaaatctttcctagatcctaaaactgcttcaaagattca 631
Query: 1017 tgt 1019
|||
Sbjct: 632 tgt 634
Score = 153 bits (77), Expect = 5e-034
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 618 attttatcatggagtagataaagagggaagacctgtatacatagaattagtaggaaaagt 677
||||||||||||||| |||||||| ||||| ||| | |||||||| ||| ||||||||||
Sbjct: 146 attttatcatggagtggataaagaaggaaggcctatctacatagagttaataggaaaagt 205
Query: 678 tgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccatgtcaa 737
|||||| || |||||||| ||||| || || |||| || ||||| ||||| ||||| ||
Sbjct: 206 tgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaatatcatgtgaa 265
Query: 738 agaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaaaagca 797
|| ||||||| |||||||| |||| |||||| || ||| | |||||||| |||| ||
Sbjct: 266 ggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgctgcaaaaaggcc 325
Query: 798 catagattcgtccactactattttggatgtgcaaggcgtgg 838
||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 326 catagattcatctactactattctggacgtgcaaggcgtgg 366
Score = 99.6 bits (50), Expect = 7e-018
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 481 aaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattgg 540
||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | || |||
Sbjct: 12 aaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatgcttaaatgg 71
Query: 541 aggaaggaattcggagtcgacaaaatagaggaatttgactac 582
|| |||||||| || | ||||| |||||||| |||||||||
Sbjct: 72 agaaaggaatttggggctgacaatatagaggagtttgactac 113
>gb|CB636066.1|CB636066 OSJNEa01C08.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01C08 3', mRNA sequence
Length = 625
Score = 163 bits (82), Expect = 5e-037
Identities = 178/210 (84%)
Strand = Plus / Minus
Query: 1794 ggtgcaggtgctcgagacgaagccgtccgagatgccgtttgagaaggaggagctgctcaa 1853
|||||||| |||||| |||||||| ||||||||||| ||||| |||||||| |||| ||
Sbjct: 570 ggtgcaggcgctcgaaacgaagccatccgagatgccatttgaaaaggaggaattgctgaa 511
Query: 1854 cgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggccct 1913
|||||||||||||| ||||| || | ||||||||| | ||||| || |||||||| ||
Sbjct: 510 tgcagccgtccgccgtgtggatgcattagaagccgagttaatctctacaaagaaggctct 451
Query: 1914 ttacgatgctctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgat 1973
|| || || |||||||| ||||| |||||||| ||||||||||||| ||| || ||||
Sbjct: 450 ctatgaagccctgatgcggcaggacgagctgcttgcgtacattgacaagcaagatatgat 391
Query: 1974 caagttccgtaaaaagaagttctgcttcta 2003
|||||| ||||||||||| |||||||||||
Sbjct: 390 caagtttcgtaaaaagaaattctgcttcta 361
>gb|AACV01002170.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002170, whole
genome shotgun sequence
Length = 42378
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Plus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 10365 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 10424
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 10425 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 10484
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 10485 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 10544
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 10545 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 10590
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 10916 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 10975
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 10976 actgcttcgaagattcatgt 10995
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 11267 aaaggtccttggaaggatcctgacataataaag 11299
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 29144759 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 29144700
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 29144699 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 29144640
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 29144639 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 29144580
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 29144579 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 29144534
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 29144208 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 29144149
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 29144148 actgcttcgaagattcatgt 29144129
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 29143857 aaaggtccttggaaggatcctgacataataaag 29143825
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 3592142 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 3592083
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 3592082 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 3592023
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 3592022 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 3591963
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 3591962 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 3591917
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 3591591 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 3591532
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 3591531 actgcttcgaagattcatgt 3591512
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 3591240 aaaggtccttggaaggatcctgacataataaag 3591208
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0047E11
Length = 148109
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 108447 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 108388
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 108387 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 108328
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 108327 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 108268
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 108267 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 108222
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 107896 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 107837
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 107836 actgcttcgaagattcatgt 107817
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 107545 aaaggtccttggaaggatcctgacataataaag 107513
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0421H07
Length = 158126
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 24455 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 24396
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 24395 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 24336
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 24335 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 24276
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 24275 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 24230
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 23904 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 23845
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 23844 actgcttcgaagattcatgt 23825
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 23553 aaaggtccttggaaggatcctgacataataaag 23521
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 3524234 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 3524175
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 3524174 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 3524115
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 3524114 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 3524055
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 3524054 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 3524009
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 3523683 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 3523624
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 3523623 actgcttcgaagattcatgt 3523604
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 3523332 aaaggtccttggaaggatcctgacataataaag 3523300
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 28725955 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 28725896
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 28725895 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 28725836
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 28725835 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 28725776
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 28725775 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 28725730
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 28725404 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 28725345
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 28725344 actgcttcgaagattcatgt 28725325
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 28725053 aaaggtccttggaaggatcctgacataataaag 28725021
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 163 bits (82), Expect = 5e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 613 ccacaattttatcatggagtagataaagagggaagacctgtatacatagaattagtagga 672
||||||||||| ||||| || |||||||||||||| ||||| ||||||||| || | |||
Sbjct: 29064089 ccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattgga 29064030
Query: 673 aaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaataccat 732
||||||||| | ||||| || ||||||| ||||| | || | |||||||| || |||
Sbjct: 29064029 aaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcat 29063970
Query: 733 gtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgctgctaaa 792
||||| || | ||||||||||| ||||||| |||||||||||| |||||||||| |||
Sbjct: 29063969 gtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaa 29063910
Query: 793 aagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
| |||||||||||||| || |||||| |||||||||||||| ||||
Sbjct: 29063909 aggcacatagattcgtgcagtactatcttggatgtgcaaggagtgg 29063864
Score = 103 bits (52), Expect = 4e-019
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 940 aatgctggccaaggcttcaagatgttatggagcacaataaaatcattcctcgatccaaaa 999
|||||||||||||||||||||||||||||| | |||||||||||||| || |||||| ||
Sbjct: 29063538 aatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaa 29063479
Query: 1000 actgcttccaagatccatgt 1019
|||||||| ||||| |||||
Sbjct: 29063478 actgcttcgaagattcatgt 29063459
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1129 aaaggtccttggaaggatcccaacataataaag 1161
|||||||||||||||||||| |||||||||||
Sbjct: 29063187 aaaggtccttggaaggatcctgacataataaag 29063155
>dbj|AG208326.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE5040_0_102_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE5040, genomic survey sequence
Length = 732
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Minus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 387 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 328
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 327 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 268
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 267 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 208
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 207 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 156
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 600 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 541
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 540 cttaaatggagaaaggaatt 521
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 70 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 11
Query: 897 ca 898
||
Sbjct: 10 ca 9
>dbj|AG209130.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE5020_0_104_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE5020, genomic survey sequence
Length = 465
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Minus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 387 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 328
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 327 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 268
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 267 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 208
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 207 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 156
>dbj|AG210950.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2788_0_735_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2788, genomic survey sequence
Length = 591
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Minus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 404 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 345
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 344 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 285
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 284 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 225
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 224 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 173
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 87 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 28
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 27 caatgacaactacccagag 9
Score = 44.1 bits (22), Expect = 0.34
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 506 aagctaagagtatgtggtcagacatgatcaattggaggaaggaatt 551
|||| ||||||||||||||||| ||| | || ||||| ||||||||
Sbjct: 583 aagcgaagagtatgtggtcagatatgcttaaatggagaaaggaatt 538
>dbj|AG024334.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND4030_0_504_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND4030, genomic survey sequence
Length = 675
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Minus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 356 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 297
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 296 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 237
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 236 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 177
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 176 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 125
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 569 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 510
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 509 cttaaatggagaaaggaatt 490
>gb|CO436077.1|CO436077 OsMR999 5MT resistant rice mutant cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 903
Score = 159 bits (80), Expect = 8e-036
Identities = 238/291 (81%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 341 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 400
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 401 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 460
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 461 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 520
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| || || || || |||||||| ||||
Sbjct: 521 cattagaagccgagttaatctctacaaagaaggctctctatgaagccctgatgcggcagg 580
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaa 1987
| |||||||| ||||||||||||| ||| || |||||| ||| |||||||
Sbjct: 581 acgagctgcttgcgtacattgacaagcaagatatgatcangtttcgtaaaa 631
Score = 85.7 bits (43), Expect = 1e-013
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1419 tattgaagaaaacattcctgttgtagacaaggttgtggatgatggatgggg 1469
||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 84 tattgaagaaagcattcctgttgttgacaaggttgtggatgatggatgggg 134
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08,
complete sequence
Length = 115026
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 76754 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 76813
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 76814 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 76873
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 76874 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 76933
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 76934 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 76985
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 75951 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 76010
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 76011 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 76070
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 76071 ctgaggagaagaagc 76085
Score = 113 bits (57), Expect = 4e-022
Identities = 174/213 (81%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 79084 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 79143
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 79144 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 79203
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 79204 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 79263
Query: 1877 cgctggaagccgagctgatctccacgaagaagg 1909
| | ||||||||| | ||||| || |||||||
Sbjct: 79264 cattagaagccgagttaatctctacaaagaagg 79296
Score = 113 bits (57), Expect = 4e-022
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaataaaat 982
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 77266 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactgtaaaat 77325
Query: 983 cattcctcgatccaaaaactgcttccaagatccatgt 1019
| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 77326 ctttcctagatcctaaaactgcttcaaagattcatgt 77362
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 76541 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 76600
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 76601 cttaaatggagaaaggaatt 76620
Score = 85.7 bits (43), Expect = 1e-013
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1419 tattgaagaaaacattcctgttgtagacaaggttgtggatgatggatgggg 1469
||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 78603 tattgaagaaagcattcctgttgttgacaaggttgtggatgatggatgggg 78653
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1160 agagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatatccagcattg 1219
|||| ||||| |||| ||| ||||| || || || ||||||||||||||||| |||| ||
Sbjct: 77883 agagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatatcaagcactg 77942
Query: 1220 atggaaaaataatacgttatgctaggcca 1248
||||||||||||| ||||||||| |||||
Sbjct: 77943 atggaaaaataattcgttatgctgggcca 77971
Score = 77.8 bits (39), Expect = 2e-011
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1261 agaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcct 1320
|||||||| ||||||| || || |||||||| |||||||||||||||| | || |||
Sbjct: 78080 agaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacct 78139
Query: 1321 actgcatcaaggaacctgattacacatcctattttgacccctgttca 1367
| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 78140 atggcatcaaggaacctgataacaaatccccttttgacccctgttca 78186
Score = 77.8 bits (39), Expect = 2e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 76117 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 76176
Query: 425 atgaggatttgctgccaccacagcacgatgattatcaca 463
||||||| || |||| | |||||| |||||||||||||
Sbjct: 76177 atgaggacctgttgccgcaacagcatgatgattatcaca 76215
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 77071 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 77130
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 77131 caatgacaactacccagag 77149
Score = 63.9 bits (32), Expect = 4e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaag 1161
||||||| ||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 77671 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaag 77722
Score = 56.0 bits (28), Expect = 9e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1924 ctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgatcaagtt 1979
|||||||| ||||| |||||||| ||||||||||||| ||| || ||||||||||
Sbjct: 79461 ctgatgcggcaggacgagctgcttgcgtacattgacaagcaagatatgatcaagtt 79516
Score = 44.1 bits (22), Expect = 0.34
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatg 182
||||||||||| || ||||| |||||||| ||||||||
Sbjct: 75076 gggatgtcaggaccactcgatcgatttgccaggccatg 75113
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07,
complete sequence
Length = 122120
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 120453 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 120512
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 120513 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 120572
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 120573 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 120632
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 120633 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 120684
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 119650 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 119709
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 119710 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 119769
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 119770 ctgaggagaagaagc 119784
Score = 113 bits (57), Expect = 4e-022
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaataaaat 982
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 120965 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactgtaaaat 121024
Query: 983 cattcctcgatccaaaaactgcttccaagatccatgt 1019
| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 121025 ctttcctagatcctaaaactgcttcaaagattcatgt 121061
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 120240 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 120299
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 120300 cttaaatggagaaaggaatt 120319
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1160 agagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatatccagcattg 1219
|||| ||||| |||| ||| ||||| || || || ||||||||||||||||| |||| ||
Sbjct: 121582 agagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatatcaagcactg 121641
Query: 1220 atggaaaaataatacgttatgctaggcca 1248
||||||||||||| ||||||||| |||||
Sbjct: 121642 atggaaaaataattcgttatgctgggcca 121670
Score = 77.8 bits (39), Expect = 2e-011
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1261 agaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcct 1320
|||||||| ||||||| || || |||||||| |||||||||||||||| | || |||
Sbjct: 121779 agaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacct 121838
Query: 1321 actgcatcaaggaacctgattacacatcctattttgacccctgttca 1367
| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 121839 atggcatcaaggaacctgataacaaatccccttttgacccctgttca 121885
Score = 77.8 bits (39), Expect = 2e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 119816 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 119875
Query: 425 atgaggatttgctgccaccacagcacgatgattatcaca 463
||||||| || |||| | |||||| |||||||||||||
Sbjct: 119876 atgaggacctgttgccgcaacagcatgatgattatcaca 119914
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 120770 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 120829
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 120830 caatgacaactacccagag 120848
Score = 63.9 bits (32), Expect = 4e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaag 1161
||||||| ||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 121370 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaag 121421
Score = 44.1 bits (22), Expect = 0.34
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatg 182
||||||||||| || ||||| |||||||| ||||||||
Sbjct: 118775 gggatgtcaggaccactcgatcgatttgccaggccatg 118812
>gb|AACV01012651.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012651, whole
genome shotgun sequence
Length = 43498
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 9162 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 9221
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 9222 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 9281
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 9282 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 9341
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 9342 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 9393
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 8359 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 8418
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 8419 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 8478
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 8479 ctgaggagaagaagc 8493
Score = 113 bits (57), Expect = 4e-022
Identities = 174/213 (81%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 11492 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 11551
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 11552 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 11611
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 11612 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 11671
Query: 1877 cgctggaagccgagctgatctccacgaagaagg 1909
| | ||||||||| | ||||| || |||||||
Sbjct: 11672 cattagaagccgagttaatctctacaaagaagg 11704
Score = 113 bits (57), Expect = 4e-022
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaataaaat 982
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 9674 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactgtaaaat 9733
Query: 983 cattcctcgatccaaaaactgcttccaagatccatgt 1019
| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 9734 ctttcctagatcctaaaactgcttcaaagattcatgt 9770
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 8949 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 9008
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 9009 cttaaatggagaaaggaatt 9028
Score = 85.7 bits (43), Expect = 1e-013
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1419 tattgaagaaaacattcctgttgtagacaaggttgtggatgatggatgggg 1469
||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 11011 tattgaagaaagcattcctgttgttgacaaggttgtggatgatggatgggg 11061
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1160 agagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatatccagcattg 1219
|||| ||||| |||| ||| ||||| || || || ||||||||||||||||| |||| ||
Sbjct: 10291 agagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatatcaagcactg 10350
Query: 1220 atggaaaaataatacgttatgctaggcca 1248
||||||||||||| ||||||||| |||||
Sbjct: 10351 atggaaaaataattcgttatgctgggcca 10379
Score = 77.8 bits (39), Expect = 2e-011
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1261 agaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcct 1320
|||||||| ||||||| || || |||||||| |||||||||||||||| | || |||
Sbjct: 10488 agaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacct 10547
Query: 1321 actgcatcaaggaacctgattacacatcctattttgacccctgttca 1367
| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 10548 atggcatcaaggaacctgataacaaatccccttttgacccctgttca 10594
Score = 77.8 bits (39), Expect = 2e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 8525 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 8584
Query: 425 atgaggatttgctgccaccacagcacgatgattatcaca 463
||||||| || |||| | |||||| |||||||||||||
Sbjct: 8585 atgaggacctgttgccgcaacagcatgatgattatcaca 8623
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 9479 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 9538
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 9539 caatgacaactacccagag 9557
Score = 63.9 bits (32), Expect = 4e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaag 1161
||||||| ||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 10079 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaag 10130
Score = 56.0 bits (28), Expect = 9e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1924 ctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgatcaagtt 1979
|||||||| ||||| |||||||| ||||||||||||| ||| || ||||||||||
Sbjct: 11869 ctgatgcggcaggacgagctgcttgcgtacattgacaagcaagatatgatcaagtt 11924
Score = 44.1 bits (22), Expect = 0.34
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatg 182
||||||||||| || ||||| |||||||| ||||||||
Sbjct: 7484 gggatgtcaggaccactcgatcgatttgccaggccatg 7521
>ref|NT_107219.1| Oryza sativa (japonica cultivar-group)
Length = 612170
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 483207 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 483266
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 483267 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 483326
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 483327 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 483386
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 483387 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 483438
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 482404 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 482463
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 482464 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 482523
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 482524 ctgaggagaagaagc 482538
Score = 113 bits (57), Expect = 4e-022
Identities = 174/213 (81%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 485537 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 485596
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 485597 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 485656
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 485657 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 485716
Query: 1877 cgctggaagccgagctgatctccacgaagaagg 1909
| | ||||||||| | ||||| || |||||||
Sbjct: 485717 cattagaagccgagttaatctctacaaagaagg 485749
Score = 113 bits (57), Expect = 4e-022
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaataaaat 982
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 483719 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactgtaaaat 483778
Query: 983 cattcctcgatccaaaaactgcttccaagatccatgt 1019
| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 483779 ctttcctagatcctaaaactgcttcaaagattcatgt 483815
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 482994 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 483053
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 483054 cttaaatggagaaaggaatt 483073
Score = 85.7 bits (43), Expect = 1e-013
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1419 tattgaagaaaacattcctgttgtagacaaggttgtggatgatggatgggg 1469
||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 485056 tattgaagaaagcattcctgttgttgacaaggttgtggatgatggatgggg 485106
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1160 agagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatatccagcattg 1219
|||| ||||| |||| ||| ||||| || || || ||||||||||||||||| |||| ||
Sbjct: 484336 agagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatatcaagcactg 484395
Query: 1220 atggaaaaataatacgttatgctaggcca 1248
||||||||||||| ||||||||| |||||
Sbjct: 484396 atggaaaaataattcgttatgctgggcca 484424
Score = 77.8 bits (39), Expect = 2e-011
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1261 agaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcct 1320
|||||||| ||||||| || || |||||||| |||||||||||||||| | || |||
Sbjct: 484533 agaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacct 484592
Query: 1321 actgcatcaaggaacctgattacacatcctattttgacccctgttca 1367
| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 484593 atggcatcaaggaacctgataacaaatccccttttgacccctgttca 484639
Score = 77.8 bits (39), Expect = 2e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 482570 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 482629
Query: 425 atgaggatttgctgccaccacagcacgatgattatcaca 463
||||||| || |||| | |||||| |||||||||||||
Sbjct: 482630 atgaggacctgttgccgcaacagcatgatgattatcaca 482668
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 483524 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 483583
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 483584 caatgacaactacccagag 483602
Score = 63.9 bits (32), Expect = 4e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaag 1161
||||||| ||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 484124 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaag 484175
Score = 56.0 bits (28), Expect = 9e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1924 ctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgatcaagtt 1979
|||||||| ||||| |||||||| ||||||||||||| ||| || ||||||||||
Sbjct: 485914 ctgatgcggcaggacgagctgcttgcgtacattgacaagcaagatatgatcaagtt 485969
Score = 44.1 bits (22), Expect = 0.34
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatg 182
||||||||||| || ||||| |||||||| ||||||||
Sbjct: 481529 gggatgtcaggaccactcgatcgatttgccaggccatg 481566
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 9253525 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 9253584
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 9253585 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 9253644
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 9253645 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 9253704
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 9253705 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 9253756
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 9252722 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 9252781
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 9252782 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 9252841
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 9252842 ctgaggagaagaagc 9252856
Score = 113 bits (57), Expect = 4e-022
Identities = 174/213 (81%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 9255855 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 9255914
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 9255915 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 9255974
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 9255975 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 9256034
Query: 1877 cgctggaagccgagctgatctccacgaagaagg 1909
| | ||||||||| | ||||| || |||||||
Sbjct: 9256035 cattagaagccgagttaatctctacaaagaagg 9256067
Score = 113 bits (57), Expect = 4e-022
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaataaaat 982
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 9254037 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactgtaaaat 9254096
Query: 983 cattcctcgatccaaaaactgcttccaagatccatgt 1019
| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 9254097 ctttcctagatcctaaaactgcttcaaagattcatgt 9254133
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 9253312 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 9253371
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 9253372 cttaaatggagaaaggaatt 9253391
Score = 85.7 bits (43), Expect = 1e-013
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1419 tattgaagaaaacattcctgttgtagacaaggttgtggatgatggatgggg 1469
||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 9255374 tattgaagaaagcattcctgttgttgacaaggttgtggatgatggatgggg 9255424
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1160 agagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatatccagcattg 1219
|||| ||||| |||| ||| ||||| || || || ||||||||||||||||| |||| ||
Sbjct: 9254654 agagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatatcaagcactg 9254713
Query: 1220 atggaaaaataatacgttatgctaggcca 1248
||||||||||||| ||||||||| |||||
Sbjct: 9254714 atggaaaaataattcgttatgctgggcca 9254742
Score = 77.8 bits (39), Expect = 2e-011
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1261 agaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcct 1320
|||||||| ||||||| || || |||||||| |||||||||||||||| | || |||
Sbjct: 9254851 agaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacct 9254910
Query: 1321 actgcatcaaggaacctgattacacatcctattttgacccctgttca 1367
| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 9254911 atggcatcaaggaacctgataacaaatccccttttgacccctgttca 9254957
Score = 77.8 bits (39), Expect = 2e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 9252888 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 9252947
Query: 425 atgaggatttgctgccaccacagcacgatgattatcaca 463
||||||| || |||| | |||||| |||||||||||||
Sbjct: 9252948 atgaggacctgttgccgcaacagcatgatgattatcaca 9252986
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 9253842 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 9253901
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 9253902 caatgacaactacccagag 9253920
Score = 63.9 bits (32), Expect = 4e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaag 1161
||||||| ||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 9254442 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaag 9254493
Score = 56.0 bits (28), Expect = 9e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1924 ctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgatcaagtt 1979
|||||||| ||||| |||||||| ||||||||||||| ||| || ||||||||||
Sbjct: 9256232 ctgatgcggcaggacgagctgcttgcgtacattgacaagcaagatatgatcaagtt 9256287
Score = 44.1 bits (22), Expect = 0.34
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatg 182
||||||||||| || ||||| |||||||| ||||||||
Sbjct: 9251847 gggatgtcaggaccactcgatcgatttgccaggccatg 9251884
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 26553838 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 26553897
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 26553898 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 26553957
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 26553958 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 26554017
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 26554018 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 26554069
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 26553035 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 26553094
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 26553095 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 26553154
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 26553155 ctgaggagaagaagc 26553169
Score = 113 bits (57), Expect = 4e-022
Identities = 174/213 (81%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 26556168 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 26556227
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 26556228 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 26556287
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 26556288 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 26556347
Query: 1877 cgctggaagccgagctgatctccacgaagaagg 1909
| | ||||||||| | ||||| || |||||||
Sbjct: 26556348 cattagaagccgagttaatctctacaaagaagg 26556380
Score = 113 bits (57), Expect = 4e-022
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaataaaat 982
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 26554350 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactgtaaaat 26554409
Query: 983 cattcctcgatccaaaaactgcttccaagatccatgt 1019
| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 26554410 ctttcctagatcctaaaactgcttcaaagattcatgt 26554446
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 26553625 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 26553684
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 26553685 cttaaatggagaaaggaatt 26553704
Score = 85.7 bits (43), Expect = 1e-013
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1419 tattgaagaaaacattcctgttgtagacaaggttgtggatgatggatgggg 1469
||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 26555687 tattgaagaaagcattcctgttgttgacaaggttgtggatgatggatgggg 26555737
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1160 agagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatatccagcattg 1219
|||| ||||| |||| ||| ||||| || || || ||||||||||||||||| |||| ||
Sbjct: 26554967 agagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatatcaagcactg 26555026
Query: 1220 atggaaaaataatacgttatgctaggcca 1248
||||||||||||| ||||||||| |||||
Sbjct: 26555027 atggaaaaataattcgttatgctgggcca 26555055
Score = 77.8 bits (39), Expect = 2e-011
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1261 agaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcct 1320
|||||||| ||||||| || || |||||||| |||||||||||||||| | || |||
Sbjct: 26555164 agaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacct 26555223
Query: 1321 actgcatcaaggaacctgattacacatcctattttgacccctgttca 1367
| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 26555224 atggcatcaaggaacctgataacaaatccccttttgacccctgttca 26555270
Score = 77.8 bits (39), Expect = 2e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 26553201 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 26553260
Query: 425 atgaggatttgctgccaccacagcacgatgattatcaca 463
||||||| || |||| | |||||| |||||||||||||
Sbjct: 26553261 atgaggacctgttgccgcaacagcatgatgattatcaca 26553299
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 26554155 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 26554214
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 26554215 caatgacaactacccagag 26554233
Score = 63.9 bits (32), Expect = 4e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaag 1161
||||||| ||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 26554755 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaag 26554806
Score = 56.0 bits (28), Expect = 9e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1924 ctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgatcaagtt 1979
|||||||| ||||| |||||||| ||||||||||||| ||| || ||||||||||
Sbjct: 26556545 ctgatgcggcaggacgagctgcttgcgtacattgacaagcaagatatgatcaagtt 26556600
Score = 44.1 bits (22), Expect = 0.34
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatg 182
||||||||||| || ||||| |||||||| ||||||||
Sbjct: 26552160 gggatgtcaggaccactcgatcgatttgccaggccatg 26552197
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 159 bits (80), Expect = 8e-036
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 607 tattacccacaattttatcatggagtagataaagagggaagacctgtatacatagaatta 666
||||| ||||||||||| |||||||| |||||||| ||||| ||| | |||||||| |||
Sbjct: 26838514 tattatccacaattttaccatggagtggataaagaaggaaggcctatctacatagagtta 26838573
Query: 667 gtaggaaaagttgatgcaaacaagctaatacaagtgacaaccctagatcggtatgtaaaa 726
|||||||||||||||| || |||||||| ||||| || || |||| || ||||| |||
Sbjct: 26838574 ataggaaaagttgatgcgaataagctaatgcaagtaactactatagagcgatatgtgaaa 26838633
Query: 727 taccatgtcaaagaatttgagaagtgcttccagatgaaatttccagcttgcaccattgct 786
|| ||||| || || ||||||| |||||||| |||| |||||| || ||| | ||||||
Sbjct: 26838634 tatcatgtgaaggagtttgagagatgcttccaaatgagatttcctgcctgctcgattgct 26838693
Query: 787 gctaaaaagcacatagattcgtccactactattttggatgtgcaaggcgtgg 838
|| |||| || ||||||||| || ||||||||| |||| |||||||||||||
Sbjct: 26838694 gcaaaaaggcccatagattcatctactactattctggacgtgcaaggcgtgg 26838745
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 26837711 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 26837770
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 26837771 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 26837830
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 26837831 ctgaggagaagaagc 26837845
Score = 113 bits (57), Expect = 4e-022
Identities = 174/213 (81%)
Strand = Plus / Plus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| ||||| || || || ||||| || ||||
Sbjct: 26840844 acaaggaagaattccggccaccgtctcctgctccgtcttatactgaaaaggatgtcctct 26840903
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 26840904 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 26840963
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||| |
Sbjct: 26840964 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtccgccgtgtggatg 26841023
Query: 1877 cgctggaagccgagctgatctccacgaagaagg 1909
| | ||||||||| | ||||| || |||||||
Sbjct: 26841024 cattagaagccgagttaatctctacaaagaagg 26841056
Score = 113 bits (57), Expect = 4e-022
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 923 gccggatgtatataattaatgctggccaaggcttcaagatgttatggagcacaataaaat 982
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 26839026 gccgcatgtatattattaatgccggccaaggcttcaagatgttatggagcactgtaaaat 26839085
Query: 983 cattcctcgatccaaaaactgcttccaagatccatgt 1019
| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 26839086 ctttcctagatcctaaaactgcttcaaagattcatgt 26839122
Score = 95.6 bits (48), Expect = 1e-016
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 472 aggttcctaaaagcacggaaatttgaagttgagaaagctaagagtatgtggtcagacatg 531
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 26838301 aggttcctcaaagcacggaaatttgatgttgagaaagcaaagagtatgtggtcagatatg 26838360
Query: 532 atcaattggaggaaggaatt 551
| || ||||| ||||||||
Sbjct: 26838361 cttaaatggagaaaggaatt 26838380
Score = 85.7 bits (43), Expect = 1e-013
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1419 tattgaagaaaacattcctgttgtagacaaggttgtggatgatggatgggg 1469
||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 26840363 tattgaagaaagcattcctgttgttgacaaggttgtggatgatggatgggg 26840413
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1160 agagagtcctcaatgacgaggcaaactacggcagacaaattgtgaccatatccagcattg 1219
|||| ||||| |||| ||| ||||| || || || ||||||||||||||||| |||| ||
Sbjct: 26839643 agagggtcctgaatggcgaagcaaattatgggaggcaaattgtgaccatatcaagcactg 26839702
Query: 1220 atggaaaaataatacgttatgctaggcca 1248
||||||||||||| ||||||||| |||||
Sbjct: 26839703 atggaaaaataattcgttatgctgggcca 26839731
Score = 77.8 bits (39), Expect = 2e-011
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1261 agaaaagggagtgatgcatctgccgagtctggatctgaagtggaagatgtaacatctcct 1320
|||||||| ||||||| || || |||||||| |||||||||||||||| | || |||
Sbjct: 26839840 agaaaaggaagtgatggctcagcggagtctgggtctgaagtggaagatggcgcgtcacct 26839899
Query: 1321 actgcatcaaggaacctgattacacatcctattttgacccctgttca 1367
| ||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 26839900 atggcatcaaggaacctgataacaaatccccttttgacccctgttca 26839946
Score = 77.8 bits (39), Expect = 2e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 26837877 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 26837936
Query: 425 atgaggatttgctgccaccacagcacgatgattatcaca 463
||||||| || |||| | |||||| |||||||||||||
Sbjct: 26837937 atgaggacctgttgccgcaacagcatgatgattatcaca 26837975
Score = 69.9 bits (35), Expect = 6e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 837 gggtttcaagaacttctcgaaatctgccagagaattaatcacacgattacagaagatcga 896
|||||| ||||||||||| ||| |||| || || ||||||||||| | |||||||||||
Sbjct: 26838831 gggtttaaagaacttctcaaaagctgcaagggatctaatcacacgactgcagaagatcga 26838890
Query: 897 cagtgataactacccagag 915
|| ||| ||||||||||||
Sbjct: 26838891 caatgacaactacccagag 26838909
Score = 63.9 bits (32), Expect = 4e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1110 aggttgccaaagatctgacaaaggtccttggaaggatcccaacataataaag 1161
||||||| ||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 26839431 aggttgcaaaaaatcagataaaggtccttggaaggatcctaacataataaag 26839482
Score = 56.0 bits (28), Expect = 9e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1924 ctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgatcaagtt 1979
|||||||| ||||| |||||||| ||||||||||||| ||| || ||||||||||
Sbjct: 26841221 ctgatgcggcaggacgagctgcttgcgtacattgacaagcaagatatgatcaagtt 26841276
Score = 44.1 bits (22), Expect = 0.34
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 gggatgtcaggccctctcgaccgatttgctaggccatg 182
||||||||||| || ||||| |||||||| ||||||||
Sbjct: 26836836 gggatgtcaggaccactcgatcgatttgccaggccatg 26836873
>dbj|AG212353.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF7783_0_402_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF7783, genomic survey sequence
Length = 460
Score = 157 bits (79), Expect = 3e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 148 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 89
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 88 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 29
Query: 319 ttgagaaggagaagc 333
|||| || ||||||
Sbjct: 28 ctgaggagaagaagc 14
>gb|CB665685.1|CB665685 OSJNEd12D23.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12D23 3', mRNA sequence
Length = 797
Score = 157 bits (79), Expect = 3e-035
Identities = 250/307 (81%)
Strand = Plus / Minus
Query: 1697 acaaggaggagttccggcctccgtctcctgccccgtcctacacggagaaggacgtgctct 1756
||||||| || |||||||| ||||||||||| |||| || || || ||||| || ||||
Sbjct: 714 acaaggaagaattccggcccccgtctcctgctccgttttatactgaaaaggatgtcctct 655
Query: 1757 cgtcgatgctgagacggctcggtgagctggagggcagggtgcaggtgctcgagacgaagc 1816
| || ||| | ||||| || || ||| |||||| | |||||||| |||||| |||||||
Sbjct: 654 catctatggtaagacgactaggcgagttggaggagaaggtgcaggcgctcgaaacgaagc 595
Query: 1817 cgtccgagatgccgtttgagaaggaggagctgctcaacgcagccgtccgccgcgtggacg 1876
| ||||||||||| ||||| |||||||| |||| || |||||||||| ||| ||||| |
Sbjct: 594 catccgagatgccatttgaaaaggaggaattgctgaatgcagccgtcccccgtgtggatg 535
Query: 1877 cgctggaagccgagctgatctccacgaagaaggccctttacgatgctctgatgcgacagg 1936
| | ||||||||| | ||||| || |||||||| ||||| || || |||||||| ||||
Sbjct: 534 cattagaagccgagttaatctctacaaagaaggctctttatgaagccctgatgcggcagg 475
Query: 1937 atgagctgctcgcgtacattgacaggcaggagctgatcaagttccgtaaaaagaagttct 1996
| |||||||| |||| ||||| || ||| || |||||||||| ||||||||||| || |
Sbjct: 474 acgagctgcttgcgtccattgccaagcaagatatgatcaagtttcgtaaaaagaaatttt 415
Query: 1997 gcttcta 2003
|||||||
Sbjct: 414 gcttcta 408
>gb|CF281978.1|CF281978 14ETL--09-E10.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-E10, mRNA sequence
Length = 565
Score = 155 bits (78), Expect = 1e-034
Identities = 177/210 (84%)
Strand = Plus / Minus
Query: 1794 ggtgcaggtgctcgagacgaagccgtccgagatgccgtttgagaaggaggagctgctcaa 1853
|||||||| |||||| |||||||| ||||||||||| ||||| |||||||| |||| ||
Sbjct: 564 ggtgcaggcgctcgaaacgaagccatccgagatgccatttgaaaaggaggaattgctgaa 505
Query: 1854 cgcagccgtccgccgcgtggacgcgctggaagccgagctgatctccacgaagaaggccct 1913
|||||||||||||| ||||| || | ||||||||| | ||||| || |||||||| ||
Sbjct: 504 tgcagccgtccgccgtgtggatgcattagaagccgagttaatctctacaaagaaggctct 445
Query: 1914 ttacgatgctctgatgcgacaggatgagctgctcgcgtacattgacaggcaggagctgat 1973
|| || || |||||||| ||||| |||||||| |||||||||| || ||| || ||||
Sbjct: 444 ctatgaagccctgatgcggcaggacgagctgcttgcgtacattggcaagcaagatatgat 385
Query: 1974 caagttccgtaaaaagaagttctgcttcta 2003
|||||| ||||||||||| |||||||||||
Sbjct: 384 caagtttcgtaaaaagaaattctgcttcta 355
>dbj|AG207730.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND9057_0_403_2A,
3' flanking sequence of Tos17 insertion in rice strain
ND9057, genomic survey sequence
Length = 216
Score = 153 bits (77), Expect = 5e-034
Identities = 113/125 (90%)
Strand = Plus / Minus
Query: 199 cataacgatgaaaggaaagagagcagatctgatgcagacaactcagaaggagataagaag 258
||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 128 cataatgatgaaaagaaagagatcagatctgacgcagacaactccgaaggagagaagaag 69
Query: 259 actaagattgggtctttcaagaaaaaagcaattaatgcggggaacaaattcaggcattcc 318
||||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 68 actaaaattggttctttcaagaaaaaggcgattaatgccgggaacaaattcaggcattcc 9
Query: 319 ttgag 323
||||
Sbjct: 8 ctgag 4
>gb|CB640397.1|CB640397 OSJNEa14K15.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa14K15 5', mRNA sequence
Length = 293
Score = 153 bits (77), Expect = 5e-034
Identities = 182/217 (83%)
Strand = Plus / Plus
Query: 365 aggacataagggacgttaaagagcttcaagatgttgagacattccgacaatgcttaattg 424
||||||||||||| ||| |||| ||||||| |||||| |||| |||||||| ||| |||
Sbjct: 77 aggacataagggatgttcaagatcttcaagctgttgatgcatttcgacaatgtttagttg 136
Query: 425 atgaggatttgctgccaccacagcacgatgattatcacatgatgttaaggttcctaaaag 484
||||||| || |||| | |||||| ||||||||||||| ||| | |||||| | ||||
Sbjct: 137 atgaggacctgttgccgcaacagcatgatgattatcacacaatgcttaggttcttcaaag 196
Query: 485 cacggaaatttgaagttgagaaagctaagagtatgtggtcagacatgatcaattggagga 544
||||||||||||| ||||||||||| ||||||||||||||||| || | || ||||| |
Sbjct: 197 cacggaaatttgatgttgagaaagcaaagagtatgtggtcagatctgcttaaatggagaa 256
Query: 545 aggaattcggagtcgacaaaatagaggaatttgacta 581
||||||| || | ||||| |||||||| ||||||||
Sbjct: 257 aggaatttggggctgacaatatagaggagtttgacta 293
Score = 58.0 bits (29), Expect = 2e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 289 attaatgcggggaacaaattcaggcattccttgagaaggagaagc 333
|||||||| ||||||||||||||||||||| |||| || ||||||
Sbjct: 1 attaatgccgggaacaaattcaggcattccctgaggagaagaagc 45
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,663,536
Number of Sequences: 438736
Number of extensions: 3663536
Number of successful extensions: 29505
Number of sequences better than 0.5: 87
Number of HSP's better than 0.5 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28595
Number of HSP's gapped (non-prelim): 872
length of query: 2357
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2335
effective length of database: 2,790,767,724
effective search space: 6516442635540
effective search space used: 6516442635540
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)