BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= M73028.2.3
(1601 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_189302.1| Oryza sativa (japonica cultivar-group), p... 274 1e-070
gb|AY872796.1|AY872796 01ET3_323_C_003_016_020F02 Oryza sat... 226 3e-056
dbj|AP002871.2| Oryza sativa (japonica cultivar-group) geno... 184 1e-043
dbj|AP002873.2| Oryza sativa (japonica cultivar-group) geno... 184 1e-043
gb|AACV01000840.1| Oryza sativa (japonica cultivar-group) c... 184 1e-043
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 184 1e-043
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 184 1e-043
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 184 1e-043
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 184 1e-043
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 184 1e-043
gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein... 135 8e-029
gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbar... 135 8e-029
gb|AACV01006437.1| Oryza sativa (japonica cultivar-group) c... 135 8e-029
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 135 8e-029
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 135 8e-029
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 135 8e-029
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 135 8e-029
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 135 8e-029
gb|C72644.1|C72644 C72644 Rice panicle at flowering stage O... 123 3e-025
gb|BP432988.1|BP432988 BP432988 Oryza sativa (japonica cult... 123 3e-025
gb|AY323484.1| Oryza sativa (japonica cultivar-group) myb-r... 123 3e-025
dbj|AK111798.1| Oryza sativa (japonica cultivar-group) cDNA... 123 3e-025
gb|AACV01010119.1| Oryza sativa (japonica cultivar-group) c... 123 3e-025
ref|XM_473184.1| Oryza sativa (japonica cultivar-group), p... 123 3e-025
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 123 3e-025
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 123 3e-025
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 123 3e-025
emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromoso... 123 3e-025
emb|Y11414.1|OSMYB1202 O.sativa mRNA for myb factor, 1202 bp 123 3e-025
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 123 3e-025
dbj|AK063027.1| Oryza sativa (japonica cultivar-group) cDNA... 111 1e-021
gb|AU183276.1|AU183276 AU183276 Rice cDNA from immature lea... 98 2e-017
dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA... 98 2e-017
ref|NM_190827.1| Oryza sativa (japonica cultivar-group), p... 98 2e-017
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 92 1e-015
gb|AACV01004769.1| Oryza sativa (japonica cultivar-group) c... 92 1e-015
ref|XM_472754.1| Oryza sativa (japonica cultivar-group), p... 92 1e-015
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 92 1e-015
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 92 1e-015
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 92 1e-015
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 92 1e-015
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 92 1e-015
dbj|AK111960.1| Oryza sativa (japonica cultivar-group) cDNA... 90 4e-015
gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone... 86 7e-014
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 86 7e-014
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 86 7e-014
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 86 7e-014
ref|NM_192243.1| Oryza sativa (japonica cultivar-group), p... 86 7e-014
ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA 86 7e-014
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 86 7e-014
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 86 7e-014
gb|AQ364476.2|AQ364476 nbxb0061G19f CUGI Rice BAC Library O... 84 3e-013
gb|CZ555484.1|CZ555484 M0027756 AS_TRIM_TDNA_B1 Oryza sativ... 84 3e-013
gb|CZ556549.1|CZ556549 M0031139 AS_TRIM_TDNA_B1 Oryza sativ... 84 3e-013
gb|CZ556783.1|CZ556783 M0032051 AS_TRIM_TDNA_B1 Oryza sativ... 84 3e-013
gb|CZ556789.1|CZ556789 M0032068 AS_TRIM_TDNA_B1 Oryza sativ... 84 3e-013
gb|CZ556801.1|CZ556801 M0032088 AS_TRIM_TDNA_B1 Oryza sativ... 84 3e-013
gb|AACV01010415.1| Oryza sativa (japonica cultivar-group) c... 84 3e-013
emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromoso... 84 3e-013
emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromoso... 84 3e-013
gb|CB653197.1|CB653197 OSJNEc04A04.f OSJNEc Oryza sativa (j... 82 1e-012
gb|AACV01016284.1| Oryza sativa (japonica cultivar-group) c... 82 1e-012
ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA 82 1e-012
ref|XM_483665.1| Oryza sativa (japonica cultivar-group), mRNA 82 1e-012
dbj|AP004259.2| Oryza sativa (japonica cultivar-group) geno... 82 1e-012
dbj|AP004006.5| Oryza sativa (japonica cultivar-group) geno... 82 1e-012
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 82 1e-012
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 82 1e-012
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 82 1e-012
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 82 1e-012
gb|C73695.1|C73695 C73695 Rice panicle (longer than 10cm) O... 80 4e-012
dbj|AK111808.1| Oryza sativa (japonica cultivar-group) cDNA... 78 2e-011
dbj|AK112117.1| Oryza sativa (japonica cultivar-group) cDNA... 78 2e-011
gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNB... 78 2e-011
gb|AACV01009913.1| Oryza sativa (japonica cultivar-group) c... 78 2e-011
gb|AACV01021797.1| Oryza sativa (japonica cultivar-group) c... 78 2e-011
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 78 2e-011
ref|XM_480122.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-011
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 78 2e-011
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 78 2e-011
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 78 2e-011
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 78 2e-011
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 78 2e-011
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 78 2e-011
gb|CZ555391.1|CZ555391 M0027416 AS_TRIM_TDNA_B1 Oryza sativ... 76 7e-011
gb|AU082155.1|AU082155 AU082155 Rice root Oryza sativa (jap... 76 7e-011
gb|AU082180.1|AU082180 AU082180 Rice shoot Oryza sativa (ja... 76 7e-011
gb|AU082322.1|AU082322 AU082322 Rice panicle (longer than 1... 76 7e-011
gb|AU082325.1|AU082325 AU082325 Rice panicle (longer than 1... 76 7e-011
gb|AU173093.1|AU173093 AU173093 Rice root Oryza sativa (jap... 76 7e-011
gb|AU184006.1|AU184006 AU184006 Rice root Oryza sativa (jap... 76 7e-011
dbj|AP003922.2| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 76 7e-011
dbj|AK104408.1| Oryza sativa (japonica cultivar-group) cDNA... 76 7e-011
dbj|AK104457.1| Oryza sativa (japonica cultivar-group) cDNA... 76 7e-011
dbj|AK111720.1| Oryza sativa (japonica cultivar-group) cDNA... 76 7e-011
dbj|AK111933.1| Oryza sativa (japonica cultivar-group) cDNA... 76 7e-011
dbj|AK111966.1| Oryza sativa (japonica cultivar-group) cDNA... 76 7e-011
dbj|AK112056.1| Oryza sativa (japonica cultivar-group) cDNA... 76 7e-011
gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone... 76 7e-011
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
dbj|AP006174.3| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
gb|AACV01002776.1| Oryza sativa (japonica cultivar-group) c... 76 7e-011
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 76 7e-011
gb|AACV01005216.1| Oryza sativa (japonica cultivar-group) c... 76 7e-011
gb|AACV01020458.1| Oryza sativa (japonica cultivar-group) c... 76 7e-011
ref|XM_466825.1| Oryza sativa (japonica cultivar-group), mRNA 76 7e-011
ref|XM_467269.1| Oryza sativa (japonica cultivar-group), mRNA 76 7e-011
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 76 7e-011
ref|XM_506902.1| PREDICTED Oryza sativa (japonica cultivar-... 76 7e-011
dbj|AP004786.3| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
dbj|AP005859.3| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 76 7e-011
dbj|AP004669.3| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
dbj|AP003297.3| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 76 7e-011
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 76 7e-011
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 76 7e-011
gb|AF474138.1| Oryza sativa typical P-type R2R3 Myb protein... 74 3e-010
dbj|AK109011.1| Oryza sativa (japonica cultivar-group) cDNA... 74 3e-010
gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone... 74 3e-010
dbj|AP003912.3| Oryza sativa (japonica cultivar-group) geno... 74 3e-010
gb|AACV01000388.1| Oryza sativa (japonica cultivar-group) c... 74 3e-010
ref|NM_197015.1| Oryza sativa (japonica cultivar-group) put... 74 3e-010
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 74 3e-010
emb|Y11350.1|OSMYB1084 O.sativa mRNA for myb factor, 1084 bp 74 3e-010
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 74 3e-010
gb|CZ556790.1|CZ556790 M0032070 AS_TRIM_TDNA_B1 Oryza sativ... 72 1e-009
gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 ... 72 1e-009
gb|AACV01006536.1| Oryza sativa (japonica cultivar-group) c... 72 1e-009
ref|XM_468625.1| Oryza sativa (japonica cultivar-group), mRNA 72 1e-009
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 72 1e-009
gb|CZ555392.1|CZ555392 M0027417 AS_TRIM_TDNA_B1 Oryza sativ... 70 4e-009
gb|CZ556778.1|CZ556778 M0032027 AS_TRIM_TDNA_B1 Oryza sativ... 70 4e-009
emb|X96750.1|OSMYB71 O.sativa myb7 gene, clone myb71 70 4e-009
emb|AL513006.1|CNS07EFL Oryza sativa (japonica cultivar-gro... 70 4e-009
dbj|AP004788.1| Oryza sativa (japonica cultivar-group) chro... 70 4e-009
gb|AF474140.1| Oryza sativa typical P-type R2R3 Myb protein... 70 4e-009
dbj|AP004567.1| Oryza sativa (japonica cultivar-group) chro... 70 4e-009
dbj|AK108259.1| Oryza sativa (japonica cultivar-group) cDNA... 70 4e-009
dbj|AK108621.1| Oryza sativa (japonica cultivar-group) cDNA... 70 4e-009
emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC O... 70 4e-009
gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone... 70 4e-009
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
dbj|AP004133.3| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
ref|NT_107157.1| Oryza sativa (japonica cultivar-group) 70 4e-009
gb|AACV01002155.1| Oryza sativa (japonica cultivar-group) c... 70 4e-009
gb|AACV01005009.1| Oryza sativa (japonica cultivar-group) c... 70 4e-009
gb|AACV01017273.1| Oryza sativa (japonica cultivar-group) c... 70 4e-009
gb|AACV01018553.1| Oryza sativa (japonica cultivar-group) c... 70 4e-009
ref|XM_463409.1| Oryza sativa (japonica cultivar-group), p... 70 4e-009
ref|XM_466994.1| Oryza sativa (japonica cultivar-group), mRNA 70 4e-009
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
emb|X96749.1|OSMYB72 O.sativa myb7 gene, clone myb72 70 4e-009
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
dbj|AK066834.1| Oryza sativa (japonica cultivar-group) cDNA... 68 2e-008
dbj|AK099108.1| Oryza sativa (japonica cultivar-group) cDNA... 68 2e-008
dbj|AK104053.1| Oryza sativa (japonica cultivar-group) cDNA... 68 2e-008
emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC O... 68 2e-008
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 68 2e-008
gb|AACV01010181.1| Oryza sativa (japonica cultivar-group) c... 68 2e-008
gb|AACV01025049.1| Oryza sativa (japonica cultivar-group) c... 68 2e-008
ref|XM_473295.1| Oryza sativa (japonica cultivar-group), p... 68 2e-008
ref|XM_475269.1| Oryza sativa (japonica cultivar-group), p... 68 2e-008
ref|XM_482584.1| Oryza sativa (japonica cultivar-group), mRNA 68 2e-008
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 68 2e-008
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 68 2e-008
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 68 2e-008
emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromoso... 68 2e-008
gb|AQ914539.1|AQ914539 nbeb0049K13r CUGI Rice BAC Library (... 66 6e-008
gb|AACV01002252.1| Oryza sativa (japonica cultivar-group) c... 66 6e-008
gb|AACV01021798.1| Oryza sativa (japonica cultivar-group) c... 66 6e-008
ref|NM_191815.1| Oryza sativa (japonica cultivar-group), p... 66 6e-008
dbj|AP003292.2| Oryza sativa (japonica cultivar-group) geno... 66 6e-008
dbj|AP003229.3| Oryza sativa (japonica cultivar-group) geno... 66 6e-008
gb|D47363.1|D47363 RICS12691A Rice green shoot Oryza sativa... 64 3e-007
gb|C73657.1|C73657 C73657 Rice panicle (longer than 10cm) O... 64 3e-007
gb|AU070855.2|AU070855 AU070855 Rice cDNA from young root O... 64 3e-007
gb|AF474134.1| Oryza sativa typical P-type R2R3 Myb protein... 64 3e-007
dbj|AK064679.1| Oryza sativa (japonica cultivar-group) cDNA... 64 3e-007
dbj|AK111782.1| Oryza sativa (japonica cultivar-group) cDNA... 64 3e-007
gb|AY459342.1| Oryza sativa (japonica cultivar-group) clone... 64 3e-007
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
dbj|AP005686.3| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
dbj|AP005747.3| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|AACV01002173.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
gb|AACV01012232.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
gb|AACV01019923.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
gb|AACV01020037.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 64 3e-007
ref|NM_192221.1| Oryza sativa (japonica cultivar-group), p... 64 3e-007
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 64 3e-007
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 64 3e-007
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 64 3e-007
gb|AC130600.3| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 64 3e-007
dbj|AP003245.4| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
emb|Y11351.1|OSMYB1402 O.sativa mRNA for myb factor, 1402 bp 64 3e-007
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|AQ325721.1|AQ325721 nbxb0020A23f CUGI Rice BAC Library O... 62 1e-006
gb|CB676151.1|CB676151 OSJNEe12E03.f OSJNEe Oryza sativa (j... 62 1e-006
emb|AL607104.1|OSJN01012 Oryza sativa (japonica cultivar-gr... 62 1e-006
dbj|AK103455.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK106039.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK111740.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK121023.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AP004090.3| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 ... 62 1e-006
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|AACV01003205.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01007164.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01017050.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01020446.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
ref|NM_193333.1| Oryza sativa (japonica cultivar-group), p... 62 1e-006
ref|NM_185512.2| Oryza sativa (japonica cultivar-group), mRNA 62 1e-006
ref|XM_463865.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-006
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 62 1e-006
dbj|AP004867.2| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
dbj|AP005092.3| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
dbj|AP003816.2| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 62 1e-006
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
emb|X89605.1|OSMYB7 O.sativa mRNA for myb 7 protein 62 1e-006
gb|CA755385.1|CA755385 BR030019000_PLATE_E12_93_098.ab1 OA ... 60 4e-006
gb|CB645413.1|CB645413 OSJNEb07B01.f OSJNEb Oryza sativa (j... 60 4e-006
gb|CB646439.1|CB646439 OSJNEb08O20.f OSJNEb Oryza sativa (j... 60 4e-006
gb|CB647549.1|CB647549 OSJNEb10I09.r OSJNEb Oryza sativa (j... 60 4e-006
gb|CB647551.1|CB647551 OSJNEb10I10.r OSJNEb Oryza sativa (j... 60 4e-006
gb|CB649485.1|CB649485 OSJNEb13H02.f OSJNEb Oryza sativa (j... 60 4e-006
gb|CB651228.1|CB651228 OSJNEb16B21.f OSJNEb Oryza sativa (j... 60 4e-006
gb|CB651229.1|CB651229 OSJNEb16B21.r OSJNEb Oryza sativa (j... 60 4e-006
gb|CB651480.1|CB651480 OSJNEb16H08.f OSJNEb Oryza sativa (j... 60 4e-006
gb|CB651481.1|CB651481 OSJNEb16H08.r OSJNEb Oryza sativa (j... 60 4e-006
gb|CB655152.1|CB655152 OSJNEc08E13.f OSJNEc Oryza sativa (j... 60 4e-006
gb|CB655153.1|CB655153 OSJNEc08E13.r OSJNEc Oryza sativa (j... 60 4e-006
gb|CB655500.1|CB655500 OSJNEc09A01.f OSJNEc Oryza sativa (j... 60 4e-006
gb|CB663811.1|CB663811 OSJNEd09C20.r OSJNEd Oryza sativa (j... 60 4e-006
gb|CB667792.1|CB667792 OSJNEd15E21.f OSJNEd Oryza sativa (j... 60 4e-006
gb|CF326047.1|CF326047 JMT1--04-P11.g1 AtJMT-overexpressing... 60 4e-006
gb|CV728451.1|CV728451 COLD--01-H09.b1 Cold treated rice le... 60 4e-006
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 60 4e-006
dbj|AP002912.2| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AK061823.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK066180.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK108452.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK110844.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone... 60 4e-006
gb|AC136956.4| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|AC093956.2| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
ref|NT_107095.1| Oryza sativa (japonica cultivar-group) chr... 60 4e-006
dbj|AP005652.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP005527.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP005619.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|AC118285.2| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|AC098833.2| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|AACV01000257.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01001493.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01003132.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01012646.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01012680.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01013245.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01013461.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01016563.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01018505.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01023384.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
dbj|AP003339.4| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AB111867.1| Oryza sativa (japonica cultivar-group) C ge... 60 4e-006
dbj|AB111868.1| Oryza sativa (japonica cultivar-group) C ge... 60 4e-006
dbj|AB111870.1| Oryza sativa (japonica cultivar-group) C ge... 60 4e-006
dbj|AB111871.1| Oryza sativa (japonica cultivar-group) C ge... 60 4e-006
ref|NM_189493.1| Oryza sativa (japonica cultivar-group), p... 60 4e-006
ref|XM_470673.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-006
ref|XM_475870.1| Oryza sativa (japonica cultivar-group), p... 60 4e-006
ref|XM_478689.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-006
ref|XM_482497.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-006
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 60 4e-006
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 60 4e-006
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 60 4e-006
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 60 4e-006
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 60 4e-006
ref|XM_462805.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-006
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 60 4e-006
dbj|AP005195.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP004231.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP004232.4| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|AY569615.1| Oryza sativa (japonica cultivar-group) MYB t... 60 4e-006
emb|Y11415.1|OSMYB1355 O.sativa mRNA for myb factor, 1355 bp 60 4e-006
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|AU082166.1|AU082166 AU082166 Rice cDNA from young root O... 58 2e-005
gb|CA758808.1|CA758808 BR030025000_PLATE_F07_54_061.ab1 OA ... 58 2e-005
gb|CB656158.1|CB656158 OSJNEc10C21.f OSJNEc Oryza sativa (j... 58 2e-005
gb|AF474137.1| Oryza sativa typical P-type R2R3 Myb protein... 58 2e-005
dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chro... 58 2e-005
gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 ... 58 2e-005
dbj|AP005636.2| Oryza sativa (japonica cultivar-group) geno... 58 2e-005
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 58 2e-005
gb|AACV01006769.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
gb|AACV01009955.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
gb|AACV01010414.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
gb|AACV01018749.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
gb|AACV01019979.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
gb|AACV01022477.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
ref|XM_470783.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-005
ref|XM_472825.1| Oryza sativa (japonica cultivar-group), p... 58 2e-005
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 58 2e-005
dbj|AP004376.3| Oryza sativa (japonica cultivar-group) geno... 58 2e-005
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromoso... 58 2e-005
gb|AC135794.3| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
gb|AC134044.4| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
gb|AQ688548.1|AQ688548 nbxb0077J20f CUGI Rice BAC Library O... 56 6e-005
gb|CZ555390.1|CZ555390 M0027415 AS_TRIM_TDNA_B1 Oryza sativ... 56 6e-005
gb|C72014.1|C72014 C72014 Rice panicle at flowering stage O... 56 6e-005
gb|C73814.1|C73814 C73814 Rice panicle (longer than 10cm) O... 56 6e-005
gb|D24724.1|D24724 RICR2443A Rice root Oryza sativa (japoni... 56 6e-005
gb|AU062529.1|AU062529 AU062529 Rice callus Oryza sativa (j... 56 6e-005
gb|CB646489.1|CB646489 OSJNEb09A06.f OSJNEb Oryza sativa (j... 56 6e-005
gb|CB647689.1|CB647689 OSJNEb10L13.f OSJNEb Oryza sativa (j... 56 6e-005
gb|CB648823.1|CB648823 OSJNEb12G15.f OSJNEb Oryza sativa (j... 56 6e-005
gb|CB651984.1|CB651984 OSJNEc01E16.f OSJNEc Oryza sativa (j... 56 6e-005
gb|CB660335.1|CB660335 OSJNEd01P11.f OSJNEd Oryza sativa (j... 56 6e-005
gb|CB661304.1|CB661304 OSJNEd03P13.f OSJNEd Oryza sativa (j... 56 6e-005
gb|CB679300.1|CB679300 OSJNEf02K08.f OSJNEf Oryza sativa (j... 56 6e-005
gb|CB682826.1|CB682826 OSJNEf10I12.f OSJNEf Oryza sativa (j... 56 6e-005
gb|CF323240.1|CF323240 HDN--03-F01.g1 OsHDAC1-overexpressin... 56 6e-005
gb|AC090973.1|AC090973 Oryza sativa (japonica cultivar-grou... 56 6e-005
gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein... 56 6e-005
dbj|AK063951.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK099223.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK102841.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK109125.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK111634.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK112018.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK119607.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 ... 56 6e-005
dbj|AP004768.3| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 ... 56 6e-005
dbj|AP003570.3| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
gb|AC108504.2| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|AACV01000343.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01002559.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01006722.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01008001.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01010768.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
dbj|AP003247.4| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
ref|NM_191052.1| Oryza sativa (japonica cultivar-group), p... 56 6e-005
ref|XM_466990.1| Oryza sativa (japonica cultivar-group), mRNA 56 6e-005
ref|XM_475091.1| Oryza sativa (japonica cultivar-group), p... 56 6e-005
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 56 6e-005
dbj|AP002743.1| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
dbj|AP002746.2| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
ref|NM_189671.1| Oryza sativa (japonica cultivar-group), p... 56 6e-005
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 56 6e-005
gb|AC093921.2| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|AU055948.1|AU055948 AU055948 Oryza sativa mature leaf Ni... 54 2e-004
gb|CA753778.1|CA753778 BR040002000_PLATE_B03_18_027.ab1 OA ... 54 2e-004
gb|CB676187.1|CB676187 OSJNEe12E23.f OSJNEe Oryza sativa (j... 54 2e-004
gb|CV152463.1|CV152463 LS331-S.SEQ Cold stressed rice cDNA ... 54 2e-004
dbj|AK066025.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK072361.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK107214.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK111697.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC O... 54 2e-004
gb|AC134230.2| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbar... 54 2e-004
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP003849.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP005465.5| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 54 2e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01005439.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01006480.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01014797.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01016207.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01024070.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01024071.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01025291.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|XM_467854.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_472292.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
emb|AJ495785.1|OSA495785 Oryza sativa (japonica cultivar-gr... 54 2e-004
emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromoso... 54 2e-004
gb|DQ075261.1| Oryza sativa (japonica cultivar-group) MYB t... 54 2e-004
gb|DQ075262.1| Oryza sativa (japonica cultivar-group) MYB t... 54 2e-004
gb|DQ075263.2| Oryza sativa (japonica cultivar-group) MYB t... 54 2e-004
gb|CZ557603.1|CZ557603 M0035221 AS_TRIM_TDNA_B1 Oryza sativ... 52 0.001
gb|AU082324.1|AU082324 AU082324 Rice panicle (longer than 1... 52 0.001
gb|CB639367.1|CB639367 OSJNEa10D24.f OSJNEa Oryza sativa (j... 52 0.001
gb|CB645414.1|CB645414 OSJNEb07B01.r OSJNEb Oryza sativa (j... 52 0.001
gb|CB645415.1|CB645415 OSJNEb07B02.f OSJNEb Oryza sativa (j... 52 0.001
gb|CB649345.1|CB649345 OSJNEb13D15.f OSJNEb Oryza sativa (j... 52 0.001
gb|CB669882.1|CB669882 OSJNEe02K23.r OSJNEe Oryza sativa (j... 52 0.001
gb|AF474136.1| Oryza sativa typical P-type R2R3 Myb protein... 52 0.001
dbj|AK069869.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK101674.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK107135.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK108709.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
gb|AY323480.1| Oryza sativa (japonica cultivar-group) putat... 52 0.001
dbj|AK119340.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC O... 52 0.001
emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC O... 52 0.001
gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone... 52 0.001
gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 ... 52 0.001
dbj|AP006265.2| Oryza sativa (japonica cultivar-group) geno... 52 0.001
dbj|AP004704.3| Oryza sativa (japonica cultivar-group) geno... 52 0.001
dbj|AP005319.3| Oryza sativa (japonica cultivar-group) geno... 52 0.001
ref|NT_107154.1| Oryza sativa (japonica cultivar-group) 52 0.001
gb|AACV01000256.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01005346.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01006165.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01006741.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01010177.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01013228.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01016837.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01018966.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
ref|XM_462803.1| Oryza sativa (japonica cultivar-group), p... 52 0.001
ref|XM_467636.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_470731.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_473291.1| Oryza sativa (japonica cultivar-group), p... 52 0.001
ref|XM_479227.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_483654.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_483655.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_507321.1| PREDICTED Oryza sativa (japonica cultivar-... 52 0.001
ref|XM_550262.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
dbj|AP004260.2| Oryza sativa (japonica cultivar-group) geno... 52 0.001
dbj|AP004306.3| Oryza sativa (japonica cultivar-group) geno... 52 0.001
emb|AJ237661.1|OSA237661 Oryza sativa mRNA for Myb factor p... 52 0.001
gb|AQ325627.1|AQ325627 nbxb0015P21f CUGI Rice BAC Library O... 50 0.004
gb|CG408359.1|CG408359 Ds49 Ds insertion lines Oryza sativa... 50 0.004
gb|C28158.1|C28158 C28158 Rice callus cDNA Oryza sativa (ja... 50 0.004
gb|C91733.1|C91733 C91733 Rice panicle shorter than 3cm Ory... 50 0.004
gb|CB658779.1|CB658779 OSJNEc15B08.f OSJNEc Oryza sativa (j... 50 0.004
gb|CB665378.1|CB665378 OSJNEd11L19.f OSJNEd Oryza sativa (j... 50 0.004
gb|CB665379.1|CB665379 OSJNEd11L19.r OSJNEd Oryza sativa (j... 50 0.004
gb|CB665403.1|CB665403 OSJNEd11M19.r OSJNEd Oryza sativa (j... 50 0.004
gb|AY026332.1| Oryza sativa Myb transcription factor JAMyb ... 50 0.004
dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK069082.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK072403.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK099283.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK107424.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK109620.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK110683.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK111807.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC O... 50 0.004
emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC O... 50 0.004
gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone... 50 0.004
gb|AC122149.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbar... 50 0.004
gb|AC123525.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
dbj|AP004057.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP004083.2| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP003980.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 50 0.004
dbj|AP004727.2| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|AC135190.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
dbj|AP003488.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP002860.1| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|AACV01000122.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01002127.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01004921.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01005548.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01005857.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01010086.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01013318.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01022281.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01023759.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01023895.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
>ref|NM_189302.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 954
Score = 274 bits (138), Expect = 1e-070
Identities = 291/342 (85%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 1 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 60
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 61 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 120
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 121 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 180
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 181 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 240
Query: 560 ctccacgccaccctcggcaacaggtggtccctgatcgccagccacctccccggccgaaca 619
||||||||||| ||||||||||||||||||||||||||| ||||| | ||||| || ||
Sbjct: 241 ctccacgccacactcggcaacaggtggtccctgatcgccggccacttgcccgggcggacg 300
Query: 620 gacaacgagatcaagaactactggaactcgcacctcagccgg 661
||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 301 gacaatgagatcaagaactactggaactcgcacctgagccgg 342
>gb|AY872796.1|AY872796 01ET3_323_C_003_016_020F02 Oryza sativa (japonica cultivar-group)
transposon insertional mutants Oryza sativa (japonica
cultivar-group) genomic clone
01ET3_323_C_003_016_020F02, DNA sequence
Length = 666
Score = 226 bits (114), Expect = 3e-056
Identities = 132/136 (97%), Gaps = 2/136 (1%)
Strand = Plus / Minus
Query: 451 aggcctgctcc-ggtgcggcaagagctgccgg-ctccggtggatcaactaccttcgggcg 508
||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 438 aggcctgctccnggtgnggcaagagctgccgggctccggtggatcaactancttcgggcg 379
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacgcc 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacgcc 319
Query: 569 accctcggcaacaggt 584
||||||||||||||||
Sbjct: 318 accctcggcaacaggt 303
>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0475H04
Length = 143337
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 136091 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 136150
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 136151 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 136210
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 136211 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 136270
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 136271 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 136330
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 136331 ctccacgccacactcggcaacaggt 136355
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 141411 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 141470
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 141471 ctggaactcgcacctgagccgg 141492
>dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0552C05
Length = 136586
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 62271 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 62330
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 62331 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 62390
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 62391 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 62450
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 62451 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 62510
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 62511 ctccacgccacactcggcaacaggt 62535
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 67591 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 67650
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 67651 ctggaactcgcacctgagccgg 67672
>gb|AACV01000840.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000840, whole
genome shotgun sequence
Length = 24665
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 1548 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 1607
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 1608 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 1667
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 1668 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 1727
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 1728 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 1787
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 1788 ctccacgccacactcggcaacaggt 1812
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 6868 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 6927
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 6928 ctggaactcgcacctgagccgg 6949
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 11346468 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 11346527
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 11346528 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 11346587
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 11346588 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 11346647
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 11346648 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 11346707
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 11346708 ctccacgccacactcggcaacaggt 11346732
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 11351788 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 11351847
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 11351848 ctggaactcgcacctgagccgg 11351869
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 25667029 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 25667088
Query: 638 tactgga 644
|||||||
Sbjct: 25667089 tactgga 25667095
Score = 75.8 bits (38), Expect = 7e-011
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 412 gcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaa 471
|||||||||||| | |||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 38006371 gcacggcgagggttgctggcggtcgctgcccaaggcggcggggctcctccgctgcggcaa 38006430
Query: 472 gagctgccggctccggtggatcaactacct 501
||||||||| ||||| ||||| ||||||||
Sbjct: 38006431 gagctgccgcctccgctggatgaactacct 38006460
Score = 69.9 bits (35), Expect = 4e-009
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacctcagc 658
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 28870911 gacaacgagatcaagaactactggaactcgcatctcagc 28870949
Score = 67.9 bits (34), Expect = 2e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 28870650 ggcctgctgcgctgcggcaagagctgccgcctccggtggatgaactacct 28870699
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 30191613 cggtgcggcaagagctgccgcctccggtggctcaactacct 30191653
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||||||||||||||
Sbjct: 29207303 ggtgcggcaagagctgcaggctgcggtggatcaactacct 29207264
Score = 60.0 bits (30), Expect = 4e-006
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 558 agctccacgccaccctcggcaacaggtggtccctgatcgccagccacctccccggccgaa 617
|||||||||||| ||||||||||||||||| | ||||||| | | || ||||| |
Sbjct: 43170086 agctccacgccaagctcggcaacaggtggtctcgcatcgccaagagcattcctggccgca 43170145
Query: 618 cagacaacgagatcaagaactactgg 643
| ||||||||||||||||||||||||
Sbjct: 43170146 ccgacaacgagatcaagaactactgg 43170171
Score = 60.0 bits (30), Expect = 4e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 608 cccggccgaacagacaacgagatcaagaactactggaactcg 649
|||||||| || ||||||||||||||||||| ||||||||||
Sbjct: 20316494 cccggccggacggacaacgagatcaagaacttctggaactcg 20316453
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 464 tgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| ||||||||||| ||||||||
Sbjct: 3529829 tgcggcaagagctgccgcctccggtggatgaactacct 3529866
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcac 652
||||||||||||||||||||||||||| |||||
Sbjct: 38006661 gacaacgagatcaagaactactggaacacgcac 38006693
Score = 56.0 bits (28), Expect = 6e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 459 tccggtgcggcaagagctgccggctccggtgg 490
|||||||||||||||||||||| |||||||||
Sbjct: 34583561 tccggtgcggcaagagctgccgcctccggtgg 34583592
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 4915650 ggtgcggcaagagctgcaggctgcggtggctcaactacct 4915611
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 605 ctccccggccgaacagacaacgagatcaagaactactggaac 646
||||||||||| || |||||||| |||||||||||||||||
Sbjct: 30191865 ctccccggccggacggacaacgacgtcaagaactactggaac 30191906
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaa 645
||||||||||||||||||||||||||
Sbjct: 3518071 gacaacgagatcaagaactactggaa 3518046
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaagg 347
|||||||||||||||||||||||| ||||
Sbjct: 28324077 gatggggagggcgccgtgctgcgacaagg 28324105
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 1547144 gacaacgagatcaagaactactgga 1547120
Score = 48.1 bits (24), Expect = 0.015
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactgg 643
||||||||||||||||||||||||
Sbjct: 10931173 gacaacgagatcaagaactactgg 10931196
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
||||||||||| ||||||||| ||||||||||
Sbjct: 10931023 aagagctgccgcctccggtggctcaactacct 10931054
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||| |||||||||||||||
Sbjct: 30196076 gacaacgagattaagaactactggaac 30196102
Score = 46.1 bits (23), Expect = 0.059
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||| |||| ||||||||||||||||
Sbjct: 29543904 ggcaagagctgcaggctgaggtggatcaactacct 29543938
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 29207024 gacaacgagatcaagaacttctggaac 29206998
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 3530093 gacaacgagatcaagaacttctggaac 3530119
Score = 44.1 bits (22), Expect = 0.23
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 318 cgatggggagggcgccgtgctgcgagaagg 347
||||||||||| ||||||||||||| ||||
Sbjct: 30191145 cgatggggaggtcgccgtgctgcgacaagg 30191174
>ref|NT_036323.3| Oryza sativa (japonica cultivar-group)
Length = 1440362
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 1296155 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 1296214
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 1296215 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 1296274
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 1296275 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 1296334
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 1296335 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 1296394
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 1296395 ctccacgccacactcggcaacaggt 1296419
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 1301475 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 1301534
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 1301535 ctggaactcgcacctgagccgg 1301556
Score = 48.1 bits (24), Expect = 0.015
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactgg 643
||||||||||||||||||||||||
Sbjct: 880860 gacaacgagatcaagaactactgg 880883
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
||||||||||| ||||||||| ||||||||||
Sbjct: 880710 aagagctgccgcctccggtggctcaactacct 880741
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 11493048 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 11493107
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 11493108 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 11493167
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 11493168 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 11493227
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 11493228 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 11493287
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 11493288 ctccacgccacactcggcaacaggt 11493312
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 11498368 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 11498427
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 11498428 ctggaactcgcacctgagccgg 11498449
Score = 73.8 bits (37), Expect = 3e-010
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 413 cacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaag 472
||||||||||| | |||| | ||||| |||||| || ||||| ||||| |||||||||
Sbjct: 5672626 cacggcgagggctgctggcgctcgctccccaaggccgccggcctcctccgctgcggcaag 5672567
Query: 473 agctgccggctccggtggatcaactacct 501
|||||||| ||||| ||||||||||||||
Sbjct: 5672566 agctgccgcctccgctggatcaactacct 5672538
Score = 60.0 bits (30), Expect = 4e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctcagccgg 661
||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 5672343 gacaacgagatcaagaactactggaacacgcacatccgccgg 5672302
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 464 tgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| ||||||||||| ||||||||
Sbjct: 3594904 tgcggcaagagctgccgcctccggtggatgaactacct 3594941
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 4924147 ggtgcggcaagagctgcaggctgcggtggctcaactacct 4924108
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 317 gcgatggggagggcgccgtgctgcgagaagg 347
|||||||||||| ||||||||||||||||||
Sbjct: 5672722 gcgatggggaggtcgccgtgctgcgagaagg 5672692
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaa 645
||||||||||||||||||||||||||
Sbjct: 3582480 gacaacgagatcaagaactactggaa 3582455
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 1573900 gacaacgagatcaagaactactgga 1573876
Score = 48.1 bits (24), Expect = 0.015
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactgg 643
||||||||||||||||||||||||
Sbjct: 11127264 gacaacgagatcaagaactactgg 11127287
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
||||||||||| ||||||||| ||||||||||
Sbjct: 11127114 aagagctgccgcctccggtggctcaactacct 11127145
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 3595168 gacaacgagatcaagaacttctggaac 3595194
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 11493048 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 11493107
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 11493108 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 11493167
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 11493168 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 11493227
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 11493228 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 11493287
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 11493288 ctccacgccacactcggcaacaggt 11493312
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 11498368 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 11498427
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 11498428 ctggaactcgcacctgagccgg 11498449
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 25335810 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 25335869
Query: 638 tactgga 644
|||||||
Sbjct: 25335870 tactgga 25335876
Score = 75.8 bits (38), Expect = 7e-011
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 412 gcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaa 471
|||||||||||| | |||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 37384847 gcacggcgagggttgctggcggtcgctgcccaaggcggcggggctcctccgctgcggcaa 37384906
Query: 472 gagctgccggctccggtggatcaactacct 501
||||||||| ||||| ||||| ||||||||
Sbjct: 37384907 gagctgccgcctccgctggatgaactacct 37384936
Score = 73.8 bits (37), Expect = 3e-010
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 413 cacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaag 472
||||||||||| | |||| | ||||| |||||| || ||||| ||||| |||||||||
Sbjct: 5672626 cacggcgagggctgctggcgctcgctccccaaggccgccggcctcctccgctgcggcaag 5672567
Query: 473 agctgccggctccggtggatcaactacct 501
|||||||| ||||| ||||||||||||||
Sbjct: 5672566 agctgccgcctccgctggatcaactacct 5672538
Score = 69.9 bits (35), Expect = 4e-009
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacctcagc 658
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 28459586 gacaacgagatcaagaactactggaactcgcatctcagc 28459624
Score = 67.9 bits (34), Expect = 2e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 28459325 ggcctgctgcgctgcggcaagagctgccgcctccggtggatgaactacct 28459374
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 29781980 cggtgcggcaagagctgccgcctccggtggctcaactacct 29782020
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||||||||||||||
Sbjct: 28780650 ggtgcggcaagagctgcaggctgcggtggatcaactacct 28780611
Score = 60.0 bits (30), Expect = 4e-006
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 558 agctccacgccaccctcggcaacaggtggtccctgatcgccagccacctccccggccgaa 617
|||||||||||| ||||||||||||||||| | ||||||| | | || ||||| |
Sbjct: 42443362 agctccacgccaagctcggcaacaggtggtctcgcatcgccaagagcattcctggccgca 42443421
Query: 618 cagacaacgagatcaagaactactgg 643
| ||||||||||||||||||||||||
Sbjct: 42443422 ccgacaacgagatcaagaactactgg 42443447
Score = 60.0 bits (30), Expect = 4e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 608 cccggccgaacagacaacgagatcaagaactactggaactcg 649
|||||||| || ||||||||||||||||||| ||||||||||
Sbjct: 19900358 cccggccggacggacaacgagatcaagaacttctggaactcg 19900317
Score = 60.0 bits (30), Expect = 4e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctcagccgg 661
||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 5672343 gacaacgagatcaagaactactggaacacgcacatccgccgg 5672302
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 464 tgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| ||||||||||| ||||||||
Sbjct: 3594904 tgcggcaagagctgccgcctccggtggatgaactacct 3594941
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcac 652
||||||||||||||||||||||||||| |||||
Sbjct: 37385137 gacaacgagatcaagaactactggaacacgcac 37385169
Score = 56.0 bits (28), Expect = 6e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 459 tccggtgcggcaagagctgccggctccggtgg 490
|||||||||||||||||||||| |||||||||
Sbjct: 34064253 tccggtgcggcaagagctgccgcctccggtgg 34064284
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 4924147 ggtgcggcaagagctgcaggctgcggtggctcaactacct 4924108
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 317 gcgatggggagggcgccgtgctgcgagaagg 347
|||||||||||| ||||||||||||||||||
Sbjct: 5672722 gcgatggggaggtcgccgtgctgcgagaagg 5672692
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 605 ctccccggccgaacagacaacgagatcaagaactactggaac 646
||||||||||| || |||||||| |||||||||||||||||
Sbjct: 29782232 ctccccggccggacggacaacgacgtcaagaactactggaac 29782273
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaa 645
||||||||||||||||||||||||||
Sbjct: 3582480 gacaacgagatcaagaactactggaa 3582455
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaagg 347
|||||||||||||||||||||||| ||||
Sbjct: 27906321 gatggggagggcgccgtgctgcgacaagg 27906349
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 1573900 gacaacgagatcaagaactactgga 1573876
Score = 48.1 bits (24), Expect = 0.015
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactgg 643
||||||||||||||||||||||||
Sbjct: 11127264 gacaacgagatcaagaactactgg 11127287
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
||||||||||| ||||||||| ||||||||||
Sbjct: 11127114 aagagctgccgcctccggtggctcaactacct 11127145
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||| |||||||||||||||
Sbjct: 29786445 gacaacgagattaagaactactggaac 29786471
Score = 46.1 bits (23), Expect = 0.059
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||| |||| ||||||||||||||||
Sbjct: 29103972 ggcaagagctgcaggctgaggtggatcaactacct 29104006
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 28780371 gacaacgagatcaagaacttctggaac 28780345
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 3595168 gacaacgagatcaagaacttctggaac 3595194
Score = 44.1 bits (22), Expect = 0.23
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 318 cgatggggagggcgccgtgctgcgagaagg 347
||||||||||| ||||||||||||| ||||
Sbjct: 29781512 cgatggggaggtcgccgtgctgcgacaagg 29781541
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 184 bits (93), Expect = 1e-043
Identities = 222/265 (83%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||||||||| | | | | |||||||||||| |||
Sbjct: 11348686 atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggag 11348745
Query: 380 gaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgctg 439
|||||| || || || | ||||| |||| |||| || ||| | ||||||||| ||
Sbjct: 11348746 gaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatg 11348805
Query: 440 cccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactac 499
||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||
Sbjct: 11348806 cccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactac 11348865
Query: 500 cttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaag 559
|| ||||| ||| ||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 11348866 ctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaac 11348925
Query: 560 ctccacgccaccctcggcaacaggt 584
||||||||||| |||||||||||||
Sbjct: 11348926 ctccacgccacactcggcaacaggt 11348950
Score = 99.6 bits (50), Expect = 5e-018
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 580 caggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaacta 639
||||||||||||||||||| ||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 11354006 caggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaacta 11354065
Query: 640 ctggaactcgcacctcagccgg 661
||||||||||||||| ||||||
Sbjct: 11354066 ctggaactcgcacctgagccgg 11354087
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 25586809 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 25586868
Query: 638 tactgga 644
|||||||
Sbjct: 25586869 tactgga 25586875
Score = 75.8 bits (38), Expect = 7e-011
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 412 gcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaa 471
|||||||||||| | |||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 37925701 gcacggcgagggttgctggcggtcgctgcccaaggcggcggggctcctccgctgcggcaa 37925760
Query: 472 gagctgccggctccggtggatcaactacct 501
||||||||| ||||| ||||| ||||||||
Sbjct: 37925761 gagctgccgcctccgctggatgaactacct 37925790
Score = 69.9 bits (35), Expect = 4e-009
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacctcagc 658
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 28790241 gacaacgagatcaagaactactggaactcgcatctcagc 28790279
Score = 67.9 bits (34), Expect = 2e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 28789980 ggcctgctgcgctgcggcaagagctgccgcctccggtggatgaactacct 28790029
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 30110943 cggtgcggcaagagctgccgcctccggtggctcaactacct 30110983
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||||||||||||||
Sbjct: 29126633 ggtgcggcaagagctgcaggctgcggtggatcaactacct 29126594
Score = 60.0 bits (30), Expect = 4e-006
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 558 agctccacgccaccctcggcaacaggtggtccctgatcgccagccacctccccggccgaa 617
|||||||||||| ||||||||||||||||| | ||||||| | | || ||||| |
Sbjct: 43089416 agctccacgccaagctcggcaacaggtggtctcgcatcgccaagagcattcctggccgca 43089475
Query: 618 cagacaacgagatcaagaactactgg 643
| ||||||||||||||||||||||||
Sbjct: 43089476 ccgacaacgagatcaagaactactgg 43089501
Score = 60.0 bits (30), Expect = 4e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 608 cccggccgaacagacaacgagatcaagaactactggaactcg 649
|||||||| || ||||||||||||||||||| ||||||||||
Sbjct: 20237777 cccggccggacggacaacgagatcaagaacttctggaactcg 20237736
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 464 tgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| ||||||||||| ||||||||
Sbjct: 3532027 tgcggcaagagctgccgcctccggtggatgaactacct 3532064
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcac 652
||||||||||||||||||||||||||| |||||
Sbjct: 37925991 gacaacgagatcaagaactactggaacacgcac 37926023
Score = 56.0 bits (28), Expect = 6e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 459 tccggtgcggcaagagctgccggctccggtgg 490
|||||||||||||||||||||| |||||||||
Sbjct: 34502891 tccggtgcggcaagagctgccgcctccggtgg 34502922
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 4917848 ggtgcggcaagagctgcaggctgcggtggctcaactacct 4917809
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 605 ctccccggccgaacagacaacgagatcaagaactactggaac 646
||||||||||| || |||||||| |||||||||||||||||
Sbjct: 30111195 ctccccggccggacggacaacgacgtcaagaactactggaac 30111236
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaa 645
||||||||||||||||||||||||||
Sbjct: 3520269 gacaacgagatcaagaactactggaa 3520244
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaagg 347
|||||||||||||||||||||||| ||||
Sbjct: 28243407 gatggggagggcgccgtgctgcgacaagg 28243435
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 1549342 gacaacgagatcaagaactactgga 1549318
Score = 48.1 bits (24), Expect = 0.015
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactgg 643
||||||||||||||||||||||||
Sbjct: 10933391 gacaacgagatcaagaactactgg 10933414
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
||||||||||| ||||||||| ||||||||||
Sbjct: 10933241 aagagctgccgcctccggtggctcaactacct 10933272
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||| |||||||||||||||
Sbjct: 30115406 gacaacgagattaagaactactggaac 30115432
Score = 46.1 bits (23), Expect = 0.059
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||| |||| ||||||||||||||||
Sbjct: 29463234 ggcaagagctgcaggctgaggtggatcaactacct 29463268
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 29126354 gacaacgagatcaagaacttctggaac 29126328
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 3532291 gacaacgagatcaagaacttctggaac 3532317
Score = 44.1 bits (22), Expect = 0.23
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 318 cgatggggagggcgccgtgctgcgagaagg 347
||||||||||| ||||||||||||| ||||
Sbjct: 30110475 cgatggggaggtcgccgtgctgcgacaagg 30110504
>gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein gene, complete cds
Length = 9589
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 5955 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 6014
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 6015 actggaactcgcacctgagcaggcagatccacacgtaccg 6054
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 875 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 934
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 935 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 994
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 995 gcccaagaatgcagg 1009
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Plus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 1326 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 1385
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 1386 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 1445
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 1446 ctaccctcgggaacaggt 1463
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 6514 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 6573
Query: 1173 cg 1174
||
Sbjct: 6574 cg 6575
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0032G21, from chromosome 3, complete sequence
Length = 187621
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 96835 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 96776
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 96775 actggaactcgcacctgagcaggcagatccacacgtaccg 96736
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 101915 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 101856
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 101855 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 101796
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 101795 gcccaagaatgcagg 101781
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 101464 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 101405
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 101404 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 101345
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 101344 ctaccctcgggaacaggt 101327
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 96276 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 96217
Query: 1173 cg 1174
||
Sbjct: 96216 cg 96215
>gb|AACV01006437.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006437, whole
genome shotgun sequence
Length = 32106
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 20003 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 19944
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 19943 actggaactcgcacctgagcaggcagatccacacgtaccg 19904
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 25083 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 25024
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 25023 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 24964
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 24963 gcccaagaatgcagg 24949
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 24632 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 24573
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 24572 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 24513
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 24512 ctaccctcgggaacaggt 24495
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 19444 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 19385
Query: 1173 cg 1174
||
Sbjct: 19384 cg 19383
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 2023838 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 2023779
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 2023778 actggaactcgcacctgagcaggcagatccacacgtaccg 2023739
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 2028918 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 2028859
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 2028858 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 2028799
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 2028798 gcccaagaatgcagg 2028784
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 2028467 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 2028408
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 2028407 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 2028348
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 2028347 ctaccctcgggaacaggt 2028330
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 2023279 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 2023220
Query: 1173 cg 1174
||
Sbjct: 2023219 cg 2023218
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||||||| | ||||||||
Sbjct: 2642741 ggcaagagctgccggctccggtggctgaactacct 2642707
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 602 cacctccccggccgaacagacaacgagatcaagaactactgg 643
|||||||| || || || ||||||||||||||||||||||||
Sbjct: 2642606 cacctcccgggacgcaccgacaacgagatcaagaactactgg 2642565
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 10766399 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 10766340
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 10766339 actggaactcgcacctgagcaggcagatccacacgtaccg 10766300
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 10771479 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 10771420
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 10771419 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 10771360
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 10771359 gcccaagaatgcagg 10771345
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 10771028 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 10770969
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 10770968 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 10770909
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 10770908 ctaccctcgggaacaggt 10770891
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 10765840 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 10765781
Query: 1173 cg 1174
||
Sbjct: 10765780 cg 10765779
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
|||||||| |||||||||||||| |||||| |||||||||| ||| ||| ||||||||
Sbjct: 12086482 cggtgcgggaagagctgccggctgcggtggctcaactacctgcggccggggatcaagagg 12086541
Query: 521 gggaacatctcc 532
|| |||||||||
Sbjct: 12086542 ggcaacatctcc 12086553
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||||||| | ||||||||
Sbjct: 11391686 ggcaagagctgccggctccggtggctgaactacct 11391652
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 602 cacctccccggccgaacagacaacgagatcaagaactactgg 643
|||||||| || || || ||||||||||||||||||||||||
Sbjct: 11391551 cacctcccgggacgcaccgacaacgagatcaagaactactgg 11391510
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 605 ctccccggccgaacagacaacgagatcaagaactactggaac 646
||||||||| |||| |||||||| ||||| ||||||||||||
Sbjct: 7196699 ctccccggcagaacggacaacgacatcaaaaactactggaac 7196740
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 614 cgaacagacaacgagatcaagaactactggaac 646
||||||||||| || ||||||||||||||||||
Sbjct: 12089357 cgaacagacaatgaaatcaagaactactggaac 12089389
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 2320395 gacaacgagatcaagaactactgga 2320371
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 10958761 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 10958702
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 10958701 actggaactcgcacctgagcaggcagatccacacgtaccg 10958662
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 10963841 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 10963782
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 10963781 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 10963722
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 10963721 gcccaagaatgcagg 10963707
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 10963390 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 10963331
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 10963330 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 10963271
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 10963270 ctaccctcgggaacaggt 10963253
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 10958202 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 10958143
Query: 1173 cg 1174
||
Sbjct: 10958142 cg 10958141
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
|||||||| |||||||||||||| |||||| |||||||||| ||| ||| ||||||||
Sbjct: 12278844 cggtgcgggaagagctgccggctgcggtggctcaactacctgcggccggggatcaagagg 12278903
Query: 521 gggaacatctcc 532
|| |||||||||
Sbjct: 12278904 ggcaacatctcc 12278915
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 455 ctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| ||||||||||||||||| |||||||||| |||| ||||
Sbjct: 21537353 ctgctccgctgcggcaagagctgccgcctccggtggaccaaccacct 21537399
Score = 58.0 bits (29), Expect = 2e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctca 656
||||||||||||||||||||||||||| ||| |||||
Sbjct: 15969580 gacaacgagatcaagaactactggaacacgcgcctca 15969544
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||||| ||||||||| | ||||||||
Sbjct: 32556433 ggtgcggcaagagctgccgcctccggtggctgaactacct 32556394
Score = 56.0 bits (28), Expect = 6e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 464 tgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagaggggg 523
||||||||||||||| || | ||||||| |||||||| || | ||| ||||||||||
Sbjct: 15096408 tgcggcaagagctgcaggttgaggtggataaactacctgaggccagacctcaagaggggc 15096349
Query: 524 aacatctccaaggaggaagaagacatcatcat 555
| | ||||| ||||||| |||||| |||||||
Sbjct: 15096348 accttctcccaggaggaggaagacctcatcat 15096317
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||||||||||||
Sbjct: 21537630 gacaacgagatcaagaactactggaac 21537656
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||||||| | ||||||||
Sbjct: 11584048 ggcaagagctgccggctccggtggctgaactacct 11584014
Score = 52.0 bits (26), Expect = 0.001
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
||||| ||||| ||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 15472834 ggcctcctccgctgcagcaagagctgccgcctccgctggaccaactacct 15472883
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 602 cacctccccggccgaacagacaacgagatcaagaactactgg 643
|||||||| || || || ||||||||||||||||||||||||
Sbjct: 11583913 cacctcccgggacgcaccgacaacgagatcaagaactactgg 11583872
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 605 ctccccggccgaacagacaacgagatcaagaactactggaac 646
||||||||| |||| |||||||| ||||| ||||||||||||
Sbjct: 7389061 ctccccggcagaacggacaacgacatcaaaaactactggaac 7389102
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 614 cgaacagacaacgagatcaagaactactggaac 646
||||||||||| || ||||||||||||||||||
Sbjct: 12281719 cgaacagacaatgaaatcaagaactactggaac 12281751
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 2512757 gacaacgagatcaagaactactgga 2512733
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 10678022 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 10677963
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 10677962 actggaactcgcacctgagcaggcagatccacacgtaccg 10677923
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 10683102 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 10683043
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 10683042 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 10682983
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 10682982 gcccaagaatgcagg 10682968
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 10682651 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 10682592
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 10682591 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 10682532
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 10682531 ctaccctcgggaacaggt 10682514
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 10677463 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 10677404
Query: 1173 cg 1174
||
Sbjct: 10677403 cg 10677402
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
|||||||| |||||||||||||| |||||| |||||||||| ||| ||| ||||||||
Sbjct: 16689220 cggtgcgggaagagctgccggctgcggtggctcaactacctgcggccggggatcaagagg 16689161
Query: 521 gggaacatctcc 532
|| |||||||||
Sbjct: 16689160 ggcaacatctcc 16689149
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 455 ctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| ||||||||||||||||| |||||||||| |||| ||||
Sbjct: 21014013 ctgctccgctgcggcaagagctgccgcctccggtggaccaaccacct 21014059
Score = 58.0 bits (29), Expect = 2e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctca 656
||||||||||||||||||||||||||| ||| |||||
Sbjct: 15345958 gacaacgagatcaagaactactggaacacgcgcctca 15345922
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||||| ||||||||| | ||||||||
Sbjct: 31740768 ggtgcggcaagagctgccgcctccggtggctgaactacct 31740729
Score = 56.0 bits (28), Expect = 6e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 464 tgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagaggggg 523
||||||||||||||| || | ||||||| |||||||| || | ||| ||||||||||
Sbjct: 14432379 tgcggcaagagctgcaggttgaggtggataaactacctgaggccagacctcaagaggggc 14432320
Query: 524 aacatctccaaggaggaagaagacatcatcat 555
| | ||||| ||||||| |||||| |||||||
Sbjct: 14432319 accttctcccaggaggaggaagacctcatcat 14432288
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||||||||||||
Sbjct: 21014289 gacaacgagatcaagaactactggaac 21014315
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||||||| | ||||||||
Sbjct: 11297244 ggcaagagctgccggctccggtggctgaactacct 11297210
Score = 52.0 bits (26), Expect = 0.001
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
||||| ||||| ||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 14800449 ggcctcctccgctgcagcaagagctgccgcctccgctggaccaactacct 14800498
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 602 cacctccccggccgaacagacaacgagatcaagaactactgg 643
|||||||| || || || ||||||||||||||||||||||||
Sbjct: 11297109 cacctcccgggacgcaccgacaacgagatcaagaactactgg 11297068
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 614 cgaacagacaacgagatcaagaactactggaac 646
||||||||||| || ||||||||||||||||||
Sbjct: 16686345 cgaacagacaatgaaatcaagaactactggaac 16686313
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 2324385 gacaacgagatcaagaactactgga 2324361
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 135 bits (68), Expect = 8e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||||||||||| ||||||||||| || | || |||||||||||||||||||
Sbjct: 10679921 acaggtggtccctgatcgcgagccacctcccggggaggacggacaacgagatcaagaact 10679862
Query: 639 actggaactcgcacctcagccggcagatccacacgtaccg 678
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 10679861 actggaactcgcacctgagcaggcagatccacacgtaccg 10679822
Score = 133 bits (67), Expect = 3e-028
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 319 gatggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcgga 378
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||
Sbjct: 10685001 gatggggagggcgccgtgctgcgagaaggttgggctgaagcgcgggaggtggacgacgga 10684942
Query: 379 agaggaccagttacttgccaactacattgcggagcacggcgaggggtcctggaggtcgct 438
|||||| || || ||| ||||||||| ||||||||||||| |||||| | |||||
Sbjct: 10684941 ggaggacgagaagctcgccggctacattgccaagcacggcgagggatcctggcgctcgct 10684882
Query: 439 gcccaagaatgcagg 453
|||||||||||||||
Sbjct: 10684881 gcccaagaatgcagg 10684867
Score = 123 bits (62), Expect = 3e-025
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||| | |
Sbjct: 10684550 atgcagggctgttgcggtgcggaaagagctgcaggctgcggtggatcaactacctgagag 10684491
Query: 507 cggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
| | ||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 10684490 ccggcgtgaagcgggggaacatctccaatcaggaagaggacgtcatcatcaagctccacg 10684431
Query: 567 ccaccctcggcaacaggt 584
| |||||||| |||||||
Sbjct: 10684430 ctaccctcgggaacaggt 10684413
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 1113 ggcccaggtggacgacctgttcgacatggactgggatggcttcgcggcccatctgtgggg 1172
|||||||| |||||||||| |||||||||||||||| |||||||||||| | ||||||||
Sbjct: 10679362 ggcccaggcggacgacctgctcgacatggactgggacggcttcgcggccgacctgtgggg 10679303
Query: 1173 cg 1174
||
Sbjct: 10679302 cg 10679301
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
|||||||| |||||||||||||| |||||| |||||||||| ||| ||| ||||||||
Sbjct: 16695587 cggtgcgggaagagctgccggctgcggtggctcaactacctgcggccggggatcaagagg 16695528
Query: 521 gggaacatctcc 532
|| |||||||||
Sbjct: 16695527 ggcaacatctcc 16695516
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 455 ctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| ||||||||||||||||| |||||||||| |||| ||||
Sbjct: 21020984 ctgctccgctgcggcaagagctgccgcctccggtggaccaaccacct 21021030
Score = 58.0 bits (29), Expect = 2e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctca 656
||||||||||||||||||||||||||| ||| |||||
Sbjct: 15351424 gacaacgagatcaagaactactggaacacgcgcctca 15351388
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||||| ||||||||| | ||||||||
Sbjct: 31650252 ggtgcggcaagagctgccgcctccggtggctgaactacct 31650213
Score = 56.0 bits (28), Expect = 6e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 464 tgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagaggggg 523
||||||||||||||| || | ||||||| |||||||| || | ||| ||||||||||
Sbjct: 14437404 tgcggcaagagctgcaggttgaggtggataaactacctgaggccagacctcaagaggggc 14437345
Query: 524 aacatctccaaggaggaagaagacatcatcat 555
| | ||||| ||||||| |||||| |||||||
Sbjct: 14437344 accttctcccaggaggaggaagacctcatcat 14437313
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||||||||||||
Sbjct: 21021260 gacaacgagatcaagaactactggaac 21021286
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||||||| | ||||||||
Sbjct: 11300481 ggcaagagctgccggctccggtggctgaactacct 11300447
Score = 52.0 bits (26), Expect = 0.001
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
||||| ||||| ||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 14805915 ggcctcctccgctgcagcaagagctgccgcctccgctggaccaactacct 14805964
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 602 cacctccccggccgaacagacaacgagatcaagaactactgg 643
|||||||| || || || ||||||||||||||||||||||||
Sbjct: 11300346 cacctcccgggacgcaccgacaacgagatcaagaactactgg 11300305
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 614 cgaacagacaacgagatcaagaactactggaac 646
||||||||||| || ||||||||||||||||||
Sbjct: 16692712 cgaacagacaatgaaatcaagaactactggaac 16692680
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 2324275 gacaacgagatcaagaactactgga 2324251
>gb|C72644.1|C72644 C72644 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1988_1A, mRNA sequence
Length = 460
Score = 123 bits (62), Expect = 3e-025
Identities = 113/130 (86%)
Strand = Plus / Plus
Query: 437 ctgcccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaac 496
||||||||| | || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 171 ctgcccaagcaagccgggctgctgcgttgcggcaagagctgccggctccggtggatcaac 230
Query: 497 taccttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatc 556
||||| ||| ||||| ||||| |||| ||| ||||||||||||| || |||| |||||||
Sbjct: 231 tacctgcggccggacatcaagcggggcaacttctccaaggaggaggaggacaccatcatc 290
Query: 557 aagctccacg 566
| |||||||
Sbjct: 291 catctccacg 300
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 54 atggggagggctccgtgctgcgagaagatggggctcaag 92
>gb|BP432988.1|BP432988 BP432988 Oryza sativa (japonica cultivar-group) whole plant
seedling Oryza sativa (japonica cultivar-group) cDNA
clone JRC1495, mRNA sequence
Length = 410
Score = 123 bits (62), Expect = 3e-025
Identities = 113/130 (86%)
Strand = Plus / Plus
Query: 437 ctgcccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaac 496
||||||||| | || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 204 ctgcccaagcaagccgggctgctgcgttgcggcaagagctgccggctccggtggatcaac 263
Query: 497 taccttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatc 556
||||| ||| ||||| ||||| |||| ||| ||||||||||||| || |||| |||||||
Sbjct: 264 tacctgcggccggacatcaagcggggcaacttctccaaggaggaggaggacaccatcatc 323
Query: 557 aagctccacg 566
| |||||||
Sbjct: 324 catctccacg 333
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 87 atggggagggctccgtgctgcgagaagatggggctcaag 125
>gb|AY323484.1| Oryza sativa (japonica cultivar-group) myb-related protein (LTR1)
mRNA, complete cds
Length = 1207
Score = 123 bits (62), Expect = 3e-025
Identities = 113/130 (86%)
Strand = Plus / Plus
Query: 437 ctgcccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaac 496
||||||||| | || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 206 ctgcccaagcaagccgggctgctgcgttgcggcaagagctgccggctccggtggatcaac 265
Query: 497 taccttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatc 556
||||| ||| ||||| ||||| |||| ||| ||||||||||||| || |||| |||||||
Sbjct: 266 tacctgcggccggacatcaagcggggcaacttctccaaggaggaggaggacaccatcatc 325
Query: 557 aagctccacg 566
| |||||||
Sbjct: 326 catctccacg 335
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 89 atggggagggctccgtgctgcgagaagatggggctcaag 127
>dbj|AK111798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H16, full
insert sequence
Length = 1836
Score = 123 bits (62), Expect = 3e-025
Identities = 104/118 (88%)
Strand = Plus / Plus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 314 gcagggctgctgcgttgcggcaagagctgccggctccggtggatcaactacctgcggccg 373
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
||| ||||| |||| ||| ||||||||||||| || |||| ||||||| | |||||||
Sbjct: 374 gacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccatctccacg 431
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 97 atggggagggctccgtgctgcgagaagatggggctcaag 135
>gb|AACV01010119.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010119, whole
genome shotgun sequence
Length = 21577
Score = 123 bits (62), Expect = 3e-025
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 20040 gcagggctgctgcgttgcggcaagagctgccggctccggtggatcaactacctgcggccg 19981
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
||| ||||| |||| ||| ||||||||||||| || |||| ||||||| | |||||||
Sbjct: 19980 gacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccatctccacg 19923
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 20257 atggggagggctccgtgctgcgagaagatggggctcaag 20219
>ref|XM_473184.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 774
Score = 123 bits (62), Expect = 3e-025
Identities = 113/130 (86%)
Strand = Plus / Plus
Query: 437 ctgcccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaac 496
||||||||| | || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 118 ctgcccaagcaagccgggctgctgcgttgcggcaagagctgccggctccggtggatcaac 177
Query: 497 taccttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatc 556
||||| ||| ||||| ||||| |||| ||| ||||||||||||| || |||| |||||||
Sbjct: 178 tacctgcggccggacatcaagcggggcaacttctccaaggaggaggaggacaccatcatc 237
Query: 557 aagctccacg 566
| |||||||
Sbjct: 238 catctccacg 247
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 1 atggggagggctccgtgctgcgagaagatggggctcaag 39
>ref|NT_079864.2| Oryza sativa (japonica cultivar-group)
Length = 1076642
Score = 123 bits (62), Expect = 3e-025
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 765520 gcagggctgctgcgttgcggcaagagctgccggctccggtggatcaactacctgcggccg 765461
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
||| ||||| |||| ||| ||||||||||||| || |||| ||||||| | |||||||
Sbjct: 765460 gacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccatctccacg 765403
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 765737 atggggagggctccgtgctgcgagaagatggggctcaag 765699
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 326892 gacaacgagatcaagaactactgga 326868
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 123 bits (62), Expect = 3e-025
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 3690631 gcagggctgctgcgttgcggcaagagctgccggctccggtggatcaactacctgcggccg 3690572
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
||| ||||| |||| ||| ||||||||||||| || |||| ||||||| | |||||||
Sbjct: 3690571 gacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccatctccacg 3690514
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 456 tgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtca 515
||||||||||||| ||||||||||| |||||||||||||||||||| ||| ||||| |||
Sbjct: 7791062 tgctccggtgcgggaagagctgccgactccggtggatcaactacctccggccggacctca 7791003
Query: 516 ag 517
||
Sbjct: 7791002 ag 7791001
Score = 77.8 bits (39), Expect = 2e-011
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 448 tgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggc 507
|||||| |||| |||||||||||||||||||| |||||||||| |||||||| ||| |
Sbjct: 874455 tgcagggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggcc 874514
Query: 508 ggacgtcaagagggg 522
|||| ||||||||||
Sbjct: 874515 ggacatcaagagggg 874529
Score = 67.9 bits (34), Expect = 2e-008
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 460 ccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaag 517
|||||||||||||||||||||||| ||||||| |||||||| ||| ||||| |||||
Sbjct: 4465749 ccggtgcggcaagagctgccggctgcggtggacgaactacctgcggccggacatcaag 4465806
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 3690848 atggggagggctccgtgctgcgagaagatggggctcaag 3690810
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcac 652
||||||||||||||||||||||||||| |||||
Sbjct: 7757114 gacaacgagatcaagaactactggaacacgcac 7757082
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 1383116 cggtgcgggaagagctgccggctgcggtggaccaactacct 1383076
Score = 52.0 bits (26), Expect = 0.001
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 464 tgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| ||||| |||| |||||||||
Sbjct: 7757454 tgcggcaagagctgccgcctccgctggaccaactacct 7757417
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 611 ggccgaacagacaacgagatcaagaactactggaactcgcacctca 656
||||| || ||||||||| | |||||||||||||||||| ||||||
Sbjct: 4444173 ggccggacggacaacgaggtgaagaactactggaactcgtacctca 4444218
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 317 gcgatggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 874180 gcgatggggcgatcgccgtgctgcgagaaggaggggctcaag 874221
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctca 656
|||||||||||||||||| ||||||| |||||||||
Sbjct: 7790794 gacaacgagatcaagaacgtctggaacacgcacctca 7790758
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 3260985 gacaacgagatcaagaactactgga 3260961
Score = 48.1 bits (24), Expect = 0.015
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||| |||||||| || || || || || || ||||||||||||||||| |
Sbjct: 4466230 acaggtggtccatgatcgccgcgcagctgcctggtcggacggacaacgagatcaagaatt 4466289
Query: 639 actggaac 646
||||||||
Sbjct: 4466290 actggaac 4466297
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 123 bits (62), Expect = 3e-025
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 22834730 gcagggctgctgcgttgcggcaagagctgccggctccggtggatcaactacctgcggccg 22834671
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
||| ||||| |||| ||| ||||||||||||| || |||| ||||||| | |||||||
Sbjct: 22834670 gacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccatctccacg 22834613
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 456 tgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtca 515
||||||||||||| ||||||||||| |||||||||||||||||||| ||| ||||| |||
Sbjct: 26935161 tgctccggtgcgggaagagctgccgactccggtggatcaactacctccggccggacctca 26935102
Query: 516 ag 517
||
Sbjct: 26935101 ag 26935100
Score = 77.8 bits (39), Expect = 2e-011
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 448 tgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggc 507
|||||| |||| |||||||||||||||||||| |||||||||| |||||||| ||| |
Sbjct: 20018554 tgcagggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggcc 20018613
Query: 508 ggacgtcaagagggg 522
|||| ||||||||||
Sbjct: 20018614 ggacatcaagagggg 20018628
Score = 67.9 bits (34), Expect = 2e-008
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 460 ccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaag 517
|||||||||||||||||||||||| ||||||| |||||||| ||| ||||| |||||
Sbjct: 23609848 ccggtgcggcaagagctgccggctgcggtggacgaactacctgcggccggacatcaag 23609905
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 22834947 atggggagggctccgtgctgcgagaagatggggctcaag 22834909
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcac 652
||||||||||||||||||||||||||| |||||
Sbjct: 26901213 gacaacgagatcaagaactactggaacacgcac 26901181
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 20527215 cggtgcgggaagagctgccggctgcggtggaccaactacct 20527175
Score = 52.0 bits (26), Expect = 0.001
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 464 tgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| ||||| |||| |||||||||
Sbjct: 26901553 tgcggcaagagctgccgcctccgctggaccaactacct 26901516
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 611 ggccgaacagacaacgagatcaagaactactggaactcgcacctca 656
||||| || ||||||||| | |||||||||||||||||| ||||||
Sbjct: 23588272 ggccggacggacaacgaggtgaagaactactggaactcgtacctca 23588317
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 317 gcgatggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 20018279 gcgatggggcgatcgccgtgctgcgagaaggaggggctcaag 20018320
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctca 656
|||||||||||||||||| ||||||| |||||||||
Sbjct: 26934893 gacaacgagatcaagaacgtctggaacacgcacctca 26934857
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 22405084 gacaacgagatcaagaactactgga 22405060
Score = 48.1 bits (24), Expect = 0.015
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||| |||||||| || || || || || || ||||||||||||||||| |
Sbjct: 23610329 acaggtggtccatgatcgccgcgcagctgcctggtcggacggacaacgagatcaagaatt 23610388
Query: 639 actggaac 646
||||||||
Sbjct: 23610389 actggaac 23610396
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
complete sequence
Length = 139080
Score = 123 bits (62), Expect = 3e-025
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 35408 gcagggctgctgcgttgcggcaagagctgccggctccggtggatcaactacctgcggccg 35349
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
||| ||||| |||| ||| ||||||||||||| || |||| ||||||| | |||||||
Sbjct: 35348 gacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccatctccacg 35291
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 35625 atggggagggctccgtgctgcgagaagatggggctcaag 35587
>emb|Y11414.1|OSMYB1202 O.sativa mRNA for myb factor, 1202 bp
Length = 1202
Score = 123 bits (62), Expect = 3e-025
Identities = 113/130 (86%)
Strand = Plus / Plus
Query: 437 ctgcccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaac 496
||||||||| | || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 196 ctgcccaagcaagccgggctgctgcgttgcggcaagagctgccggctccggtggatcaac 255
Query: 497 taccttcgggcggacgtcaagagggggaacatctccaaggaggaagaagacatcatcatc 556
||||| ||| ||||| ||||| |||| ||| ||||||||||||| || |||| |||||||
Sbjct: 256 tacctgcggccggacatcaagcggggcaacttctccaaggaggaggaggacaccatcatc 315
Query: 557 aagctccacg 566
| |||||||
Sbjct: 316 catctccacg 325
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 79 atggggagggctccgtgctgcgagaagatggggctcaag 117
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 123 bits (62), Expect = 3e-025
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 25817998 gcagggctgctgcgttgcggcaagagctgccggctccggtggatcaactacctgcggccg 25817939
Query: 509 gacgtcaagagggggaacatctccaaggaggaagaagacatcatcatcaagctccacg 566
||| ||||| |||| ||| ||||||||||||| || |||| ||||||| | |||||||
Sbjct: 25817938 gacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccatctccacg 25817881
Score = 83.8 bits (42), Expect = 3e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 456 tgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtca 515
||||||||||||| ||||||||||| |||||||||||||||||||| ||| ||||| |||
Sbjct: 30003510 tgctccggtgcgggaagagctgccgactccggtggatcaactacctccggccggacctca 30003451
Query: 516 ag 517
||
Sbjct: 30003450 ag 30003449
Score = 77.8 bits (39), Expect = 2e-011
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 448 tgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggc 507
|||||| |||| |||||||||||||||||||| |||||||||| |||||||| ||| |
Sbjct: 22999213 tgcagggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggcc 22999272
Query: 508 ggacgtcaagagggg 522
|||| ||||||||||
Sbjct: 22999273 ggacatcaagagggg 22999287
Score = 67.9 bits (34), Expect = 2e-008
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 460 ccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaag 517
|||||||||||||||||||||||| ||||||| |||||||| ||| ||||| |||||
Sbjct: 26633718 ccggtgcggcaagagctgccggctgcggtggacgaactacctgcggccggacatcaag 26633775
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 25818215 atggggagggctccgtgctgcgagaagatggggctcaag 25818177
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacct 654
||||||||||||||||||||||||||| |||||||
Sbjct: 23000294 gacaacgagatcaagaactactggaacacgcacct 23000328
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcac 652
||||||||||||||||||||||||||| |||||
Sbjct: 29969875 gacaacgagatcaagaactactggaacacgcac 29969843
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 23487054 cggtgcgggaagagctgccggctgcggtggaccaactacct 23487014
Score = 54.0 bits (27), Expect = 2e-004
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 468 gcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagggggaac 526
|||||||||||||||||||||||| |||||||| ||| ||| ||||| ||||||||
Sbjct: 19170002 gcaagagctgccggctccggtggacgaactacctccggccggggatcaagcgggggaac 19170060
Score = 52.0 bits (26), Expect = 0.001
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 464 tgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| ||||| |||| |||||||||
Sbjct: 29970215 tgcggcaagagctgccgcctccgctggaccaactacct 29970178
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 611 ggccgaacagacaacgagatcaagaactactggaactcgcacctca 656
||||| || ||||||||| | |||||||||||||||||| ||||||
Sbjct: 26613271 ggccggacggacaacgaggtgaagaactactggaactcgtacctca 26613316
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 317 gcgatggggagggcgccgtgctgcgagaaggtggggctcaag 358
||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 22998938 gcgatggggcgatcgccgtgctgcgagaaggaggggctcaag 22998979
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaactcgcacctca 656
|||||||||||||||||| ||||||| |||||||||
Sbjct: 30003242 gacaacgagatcaagaacgtctggaacacgcacctca 30003206
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 25379372 gacaacgagatcaagaactactgga 25379348
Score = 48.1 bits (24), Expect = 0.015
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 579 acaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaact 638
||||||||||| |||||||| || || || || || || ||||||||||||||||| |
Sbjct: 26634199 acaggtggtccatgatcgccgcgcagctgcctggtcggacggacaacgagatcaagaatt 26634258
Query: 639 actggaac 646
||||||||
Sbjct: 26634259 actggaac 26634266
Score = 44.1 bits (22), Expect = 0.23
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaaggt 348
|||||||||| ||||||||||||| |||||
Sbjct: 19169763 gatggggaggccgccgtgctgcgacaaggt 19169792
>dbj|AK063027.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-B12, full
insert sequence
Length = 1027
Score = 111 bits (56), Expect = 1e-021
Identities = 191/236 (80%)
Strand = Plus / Plus
Query: 411 agcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggca 470
||||||||||||| | |||||||||||| |||||| || || |||| || ||||| |
Sbjct: 149 agcacggcgagggctgctggaggtcgctccccaaggccgccgggttgctgcgttgcggga 208
Query: 471 agagctgccggctccggtggatcaactaccttcgggcggacgtcaagagggggaacatct 530
|||||||||| |||||||||||||||||||| || | ||| ||||| | || ||| ||
Sbjct: 209 agagctgccgcctccggtggatcaactacctccgccccgacctcaagcgcggcaacttca 268
Query: 531 ccaaggaggaagaagacatcatcatcaagctccacgccaccctcggcaacaggtggtccc 590
|| | |||||||| || |||||||||||||||||| ||||||||||| |||||| |
Sbjct: 269 ccgacgaggaagacgagctcatcatcaagctccacgagctcctcggcaacaagtggtcgc 328
Query: 591 tgatcgccagccacctccccggccgaacagacaacgagatcaagaactactggaac 646
|||||||| | || || || | || |||||||||||||||||||||||||||
Sbjct: 329 tgatcgccgggaggctgccggggaggacggacaacgagatcaagaactactggaac 384
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 317 gcgatggggagggcgccgtgctgcgagaagg 347
|||||||||||| ||||||||||||||||||
Sbjct: 55 gcgatggggaggtcgccgtgctgcgagaagg 85
>gb|AU183276.1|AU183276 AU183276 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60862, mRNA sequence
Length = 451
Score = 97.6 bits (49), Expect = 2e-017
Identities = 193/241 (80%)
Strand = Plus / Plus
Query: 412 gcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaa 471
|||||||||||| | |||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 163 gcacggcgagggttgctggcggtcgctgcccaaggcggcggggctcctccgctgcggcaa 222
Query: 472 gagctgccggctccggtggatcaactaccttcgggcggacgtcaagagggggaacatctc 531
||||||||| ||||| ||||| |||||||| || | ||| ||||| | || ||| || |
Sbjct: 223 gagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggcaacttcac 282
Query: 532 caaggaggaagaagacatcatcatcaagctccacgccaccctcggcaacaggtggtccct 591
| | || || || || |||||||||||||||||||| |||||||||| |||||| |
Sbjct: 283 cgacgacgacgacgagctcatcatcaagctccacgcccttctcggcaacaagtggtcgtt 342
Query: 592 gatcgccagccacctccccggccgaacagacaacgagatcaagaactactggaactcgca 651
||| || | || || || || | || ||||||||||||||||||||||||||| ||||
Sbjct: 343 gattgcggggcagctgccggggaggacggacaacgagatcaagaactactggaacacgca 402
Query: 652 c 652
|
Sbjct: 403 c 403
>dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F12, full
insert sequence
Length = 1037
Score = 97.6 bits (49), Expect = 2e-017
Identities = 193/241 (80%)
Strand = Plus / Plus
Query: 412 gcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaa 471
|||||||||||| | |||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 189 gcacggcgagggttgctggcggtcgctgcccaaggcggcggggctcctccgctgcggcaa 248
Query: 472 gagctgccggctccggtggatcaactaccttcgggcggacgtcaagagggggaacatctc 531
||||||||| ||||| ||||| |||||||| || | ||| ||||| | || ||| || |
Sbjct: 249 gagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggcaacttcac 308
Query: 532 caaggaggaagaagacatcatcatcaagctccacgccaccctcggcaacaggtggtccct 591
| | || || || || |||||||||||||||||||| |||||||||| |||||| |
Sbjct: 309 cgacgacgacgacgagctcatcatcaagctccacgcccttctcggcaacaagtggtcgtt 368
Query: 592 gatcgccagccacctccccggccgaacagacaacgagatcaagaactactggaactcgca 651
||| || | || || || || | || ||||||||||||||||||||||||||| ||||
Sbjct: 369 gattgcggggcagctgccggggaggacggacaacgagatcaagaactactggaacacgca 428
Query: 652 c 652
|
Sbjct: 429 c 429
>ref|NM_190827.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 864
Score = 97.6 bits (49), Expect = 2e-017
Identities = 193/241 (80%)
Strand = Plus / Plus
Query: 412 gcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaa 471
|||||||||||| | |||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 93 gcacggcgagggttgctggcggtcgctgcccaaggcggcggggctcctccgctgcggcaa 152
Query: 472 gagctgccggctccggtggatcaactaccttcgggcggacgtcaagagggggaacatctc 531
||||||||| ||||| ||||| |||||||| || | ||| ||||| | || ||| || |
Sbjct: 153 gagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggcaacttcac 212
Query: 532 caaggaggaagaagacatcatcatcaagctccacgccaccctcggcaacaggtggtccct 591
| | || || || || |||||||||||||||||||| |||||||||| |||||| |
Sbjct: 213 cgacgacgacgacgagctcatcatcaagctccacgcccttctcggcaacaagtggtcgtt 272
Query: 592 gatcgccagccacctccccggccgaacagacaacgagatcaagaactactggaactcgca 651
||| || | || || || || | || ||||||||||||||||||||||||||| ||||
Sbjct: 273 gattgcggggcagctgccggggaggacggacaacgagatcaagaactactggaacacgca 332
Query: 652 c 652
|
Sbjct: 333 c 333
>dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone B1079H01,
*** SEQUENCING IN PROGRESS ***
Length = 167258
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 9135 cggtgcggcaagagctgccggctccggtggacgaactaccttcggccggacatcaagagg 9194
Query: 521 gg 522
||
Sbjct: 9195 gg 9196
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacct 654
||||||||||||||||||||||||||| |||||||
Sbjct: 10196 gacaacgagatcaagaactactggaacacgcacct 10230
>gb|AACV01004769.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004769, whole
genome shotgun sequence
Length = 13776
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 1074 cggtgcggcaagagctgccggctccggtggacgaactaccttcggccggacatcaagagg 1015
Query: 521 gg 522
||
Sbjct: 1014 gg 1013
>ref|XM_472754.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1038
Score = 91.7 bits (46), Expect = 1e-015
Identities = 157/194 (80%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
|||||||||||||||||||| |||||||||| |||||||| ||| ||||| ||||||||
Sbjct: 142 cggtgcggcaagagctgccgactccggtggacgaactacctccggccggacatcaagagg 201
Query: 521 gggaacatctccaaggaggaagaagacatcatcatcaagctccacgccaccctcggcaac 580
|| || || | | |||| || | | ||||||| ||||||||||| |||||||||
Sbjct: 202 ggcaagttcagcctgcaggaggagcagaccatcatccagctccacgcccttctcggcaac 261
Query: 581 aggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaactac 640
|||||||| |||||| | ||||| || || || |||||||||||||||||||||
Sbjct: 262 aggtggtcggcgatcgcgacgcacctgccgaagcgcacggacaacgagatcaagaactac 321
Query: 641 tggaactcgcacct 654
|||||| |||||||
Sbjct: 322 tggaacacgcacct 335
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 330 cgccgtgctgcgagaaggtggggctcaag 358
|||||||||||||||||| ||||||||||
Sbjct: 11 cgccgtgctgcgagaaggaggggctcaag 39
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1267B06
Length = 156989
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 46225 cggtgcggcaagagctgccggctccggtggacgaactaccttcggccggacatcaagagg 46284
Query: 521 gg 522
||
Sbjct: 46285 gg 46286
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacct 654
||||||||||||||||||||||||||| |||||||
Sbjct: 47286 gacaacgagatcaagaactactggaacacgcacct 47320
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 3471823 cggtgcggcaagagctgccggctccggtggacgaactaccttcggccggacatcaagagg 3471882
Query: 521 gg 522
||
Sbjct: 3471883 gg 3471884
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacct 654
||||||||||||||||||||||||||| |||||||
Sbjct: 3472884 gacaacgagatcaagaactactggaacacgcacct 3472918
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 5785044 gacaacgagatcaagaactactgga 5785020
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 8630631 cggtgcggcaagagctgccggctccggtggacgaactaccttcggccggacatcaagagg 8630690
Query: 521 gg 522
||
Sbjct: 8630691 gg 8630692
Score = 75.8 bits (38), Expect = 7e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 456 tgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 15007772 tgctgcggtgcggcaagagctgccgcctccggtggatcaactacct 15007727
Score = 75.8 bits (38), Expect = 7e-011
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||| ||||||| ||| | ||| ||||||||||||
Sbjct: 11224668 atggggagggcgccgtgctgcgagaagatggggctgaagagggggccgtggacggcggag 11224609
Query: 380 gaggac 385
||||||
Sbjct: 11224608 gaggac 11224603
Score = 75.8 bits (38), Expect = 7e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 11224536 ggccttctccgctgcggcaagagctgccgcctccggtggatcaactacct 11224487
Score = 69.9 bits (35), Expect = 4e-009
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| |||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 12157734 atgcagggctgaaccggtgcggcaagagctgccggctgcggtggacgaactacctccggc 12157793
Query: 507 cggacgtcaag 517
||||| |||||
Sbjct: 12157794 cggacatcaag 12157804
Score = 58.0 bits (29), Expect = 2e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 608 cccggccgaacagacaacgagatcaagaactactggaactcgcacctca 656
|||||||| || |||||||||||||||||||| |||||| | |||||||
Sbjct: 12158672 cccggccggaccgacaacgagatcaagaactattggaacactcacctca 12158720
Score = 56.0 bits (28), Expect = 6e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
|||||||||||||| |||||||||||||||||
Sbjct: 12139330 aagagctgccggctgcggtggatcaactacct 12139361
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||||||||||||
Sbjct: 18307762 gacaacgagatcaagaactactggaac 18307736
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| |||||| |||| || |||||||||||||| |||||| |||||||| ||| |
Sbjct: 17056558 gcagggctgctcaggtgtgggaagagctgccggctgaggtggacgaactacctgcggccc 17056499
Query: 509 gacgtcaagagggg 522
||| ||||||||||
Sbjct: 17056498 gacctcaagagggg 17056485
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 313 gcgcgcgatggggagggcgccgtgctgcgagaaggtggggctcaag 358
|||||| ||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 12157095 gcgcgccatggggagggcgccgtgttgcgacaagaaggggctcaag 12157140
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaagg 347
|||||||||||||||||||||||| ||||
Sbjct: 20067736 gatggggagggcgccgtgctgcgacaagg 20067764
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 10926541 gacaacgagatcaagaactactgga 10926517
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 615 gaacagacaacgagatcaagaactactggaac 646
|||| |||||||| ||||||||||||||||||
Sbjct: 20070294 gaacggacaacgacatcaagaactactggaac 20070325
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||| ||||||||
Sbjct: 17056292 gacaacgagatcaagaaccactggaac 17056266
Score = 46.1 bits (23), Expect = 0.059
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 615 gaacagacaacgagatcaagaactactggaa 645
|||||||||||||| | ||||||||||||||
Sbjct: 12140864 gaacagacaacgaggtgaagaactactggaa 12140894
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 22083695 cggtgcggcaagagctgccggctccggtggacgaactaccttcggccggacatcaagagg 22083754
Query: 521 gg 522
||
Sbjct: 22083755 gg 22083756
Score = 75.8 bits (38), Expect = 7e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 456 tgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28460836 tgctgcggtgcggcaagagctgccgcctccggtggatcaactacct 28460791
Score = 75.8 bits (38), Expect = 7e-011
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||| ||||||| ||| | ||| ||||||||||||
Sbjct: 24677732 atggggagggcgccgtgctgcgagaagatggggctgaagagggggccgtggacggcggag 24677673
Query: 380 gaggac 385
||||||
Sbjct: 24677672 gaggac 24677667
Score = 75.8 bits (38), Expect = 7e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 24677600 ggccttctccgctgcggcaagagctgccgcctccggtggatcaactacct 24677551
Score = 69.9 bits (35), Expect = 4e-009
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| |||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 25610798 atgcagggctgaaccggtgcggcaagagctgccggctgcggtggacgaactacctccggc 25610857
Query: 507 cggacgtcaag 517
||||| |||||
Sbjct: 25610858 cggacatcaag 25610868
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 467 ggcaagagctgccggctccggtggatcaactaccttcgg 505
||||||||||||||||| || ||||||||||||||||||
Sbjct: 803185 ggcaagagctgccggctgcgttggatcaactaccttcgg 803147
Score = 58.0 bits (29), Expect = 2e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 608 cccggccgaacagacaacgagatcaagaactactggaactcgcacctca 656
|||||||| || |||||||||||||||||||| |||||| | |||||||
Sbjct: 25611736 cccggccggaccgacaacgagatcaagaactattggaacactcacctca 25611784
Score = 56.0 bits (28), Expect = 6e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
|||||||||||||| |||||||||||||||||
Sbjct: 25592394 aagagctgccggctgcggtggatcaactacct 25592425
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||||||||||||
Sbjct: 31760826 gacaacgagatcaagaactactggaac 31760800
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| |||||| |||| || |||||||||||||| |||||| |||||||| ||| |
Sbjct: 30509622 gcagggctgctcaggtgtgggaagagctgccggctgaggtggacgaactacctgcggccc 30509563
Query: 509 gacgtcaagagggg 522
||| ||||||||||
Sbjct: 30509562 gacctcaagagggg 30509549
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 313 gcgcgcgatggggagggcgccgtgctgcgagaaggtggggctcaag 358
|||||| ||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 25610159 gcgcgccatggggagggcgccgtgttgcgacaagaaggggctcaag 25610204
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaagg 347
|||||||||||||||||||||||| ||||
Sbjct: 33520800 gatggggagggcgccgtgctgcgacaagg 33520828
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 24379605 gacaacgagatcaagaactactgga 24379581
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 615 gaacagacaacgagatcaagaactactggaac 646
|||| |||||||| ||||||||||||||||||
Sbjct: 33523358 gaacggacaacgacatcaagaactactggaac 33523389
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||| ||||||||
Sbjct: 30509356 gacaacgagatcaagaaccactggaac 30509330
Score = 46.1 bits (23), Expect = 0.059
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 615 gaacagacaacgagatcaagaactactggaa 645
|||||||||||||| | ||||||||||||||
Sbjct: 25593928 gaacagacaacgaggtgaagaactactggaa 25593958
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagagg 520
||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 22287581 cggtgcggcaagagctgccggctccggtggacgaactaccttcggccggacatcaagagg 22287640
Query: 521 gg 522
||
Sbjct: 22287641 gg 22287642
Score = 75.8 bits (38), Expect = 7e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 456 tgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28578204 tgctgcggtgcggcaagagctgccgcctccggtggatcaactacct 28578159
Score = 75.8 bits (38), Expect = 7e-011
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 320 atggggagggcgccgtgctgcgagaaggtggggctcaagcgagggaggtggacggcggaa 379
||||||||||||||||||||||||||| ||||||| ||| | ||| ||||||||||||
Sbjct: 24898303 atggggagggcgccgtgctgcgagaagatggggctgaagagggggccgtggacggcggag 24898244
Query: 380 gaggac 385
||||||
Sbjct: 24898243 gaggac 24898238
Score = 75.8 bits (38), Expect = 7e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 24898171 ggccttctccgctgcggcaagagctgccgcctccggtggatcaactacct 24898122
Score = 69.9 bits (35), Expect = 4e-009
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 447 atgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcggg 506
||||||| ||| |||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 25797360 atgcagggctgaaccggtgcggcaagagctgccggctgcggtggacgaactacctccggc 25797419
Query: 507 cggacgtcaag 517
||||| |||||
Sbjct: 25797420 cggacatcaag 25797430
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacct 654
||||||||||||||||||||||||||| |||||||
Sbjct: 22288642 gacaacgagatcaagaactactggaacacgcacct 22288676
Score = 61.9 bits (31), Expect = 1e-006
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 467 ggcaagagctgccggctccggtggatcaactaccttcgg 505
||||||||||||||||| || ||||||||||||||||||
Sbjct: 790556 ggcaagagctgccggctgcgttggatcaactaccttcgg 790518
Score = 58.0 bits (29), Expect = 2e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 608 cccggccgaacagacaacgagatcaagaactactggaactcgcacctca 656
|||||||| || |||||||||||||||||||| |||||| | |||||||
Sbjct: 25798298 cccggccggaccgacaacgagatcaagaactattggaacactcacctca 25798346
Score = 56.0 bits (28), Expect = 6e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 470 aagagctgccggctccggtggatcaactacct 501
|||||||||||||| |||||||||||||||||
Sbjct: 25778957 aagagctgccggctgcggtggatcaactacct 25778988
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||||||||||||
Sbjct: 31744146 gacaacgagatcaagaactactggaac 31744120
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 449 gcaggcctgctccggtgcggcaagagctgccggctccggtggatcaactaccttcgggcg 508
||||| |||||| |||| || |||||||||||||| |||||| |||||||| ||| |
Sbjct: 30559256 gcagggctgctcaggtgtgggaagagctgccggctgaggtggacgaactacctgcggccc 30559197
Query: 509 gacgtcaagagggg 522
||| ||||||||||
Sbjct: 30559196 gacctcaagagggg 30559183
Score = 52.0 bits (26), Expect = 0.001
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 313 gcgcgcgatggggagggcgccgtgctgcgagaaggtggggctcaag 358
|||||| ||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 25796718 gcgcgccatggggagggcgccgtgttgcgacaagaaggggctcaag 25796763
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaagg 347
|||||||||||||||||||||||| ||||
Sbjct: 33418978 gatggggagggcgccgtgctgcgacaagg 33419006
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactgga 644
|||||||||||||||||||||||||
Sbjct: 24600802 gacaacgagatcaagaactactgga 24600778
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 615 gaacagacaacgagatcaagaactactggaac 646
|||| |||||||| ||||||||||||||||||
Sbjct: 33420544 gaacggacaacgacatcaagaactactggaac 33420575
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
|||||||||||||||||| ||||||||
Sbjct: 30558990 gacaacgagatcaagaaccactggaac 30558964
Score = 46.1 bits (23), Expect = 0.059
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 615 gaacagacaacgagatcaagaactactggaa 645
|||||||||||||| | ||||||||||||||
Sbjct: 25780491 gaacagacaacgaggtgaagaactactggaa 25780521
>dbj|AK111960.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-D02, full
insert sequence
Length = 1637
Score = 89.7 bits (45), Expect = 4e-015
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 437 ctgcccaagaatgcaggcctgctccggtgcggcaagagctgccggctccggtggatcaac 496
||||||||| | ||||| ||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 251 ctgcccaagcaagcaggtttgctccggtgcgggaagagctgccgactccggtggatcaac 310
Query: 497 taccttcgggcggacgtcaag 517
||||| ||| ||||| |||||
Sbjct: 311 tacctccggccggacctcaag 331
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacctca 656
|||||||||||||||||| ||||||| |||||||||
Sbjct: 434 gacaacgagatcaagaacgtctggaacacgcacctca 470
>gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone CL029396.2 R2R3-MYB gene
region
Length = 16710
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 11963 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 11904
Query: 638 tactgga 644
|||||||
Sbjct: 11903 tactgga 11897
>gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001928, whole
genome shotgun sequence
Length = 16252
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 12282 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 12223
Query: 638 tactgga 644
|||||||
Sbjct: 12222 tactgga 12216
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0004A09
Length = 158826
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 33615 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 33674
Query: 638 tactgga 644
|||||||
Sbjct: 33675 tactgga 33681
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0696E01
Length = 194056
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 114412 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 114471
Query: 638 tactgga 644
|||||||
Sbjct: 114472 tactgga 114478
>ref|NM_192243.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 675
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 253 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 312
Query: 638 tactgga 644
|||||||
Sbjct: 313 tactgga 319
>ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1074
Score = 85.7 bits (43), Expect = 7e-014
Identities = 157/195 (80%)
Strand = Plus / Plus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactaccttcgggcggacgtcaagaggg 521
|||| |||||||||||| |||| ||||||| |||||||| || ||||| |||||||||
Sbjct: 143 ggtgtggcaagagctgcaggctgcggtggacgaactacctgaggccggacatcaagaggg 202
Query: 522 ggaacatctccaaggaggaagaagacatcatcatcaagctccacgccaccctcggcaaca 581
| || ||||| ||||||| || | | |||| || | |||||| ||| |||||||||||
Sbjct: 203 gcaagttctcccaggaggaggagcagaccatcctccacctccactccatcctcggcaaca 262
Query: 582 ggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaactact 641
|||||| |||||| | ||||| || || | || ||||||||||||||||||| ||
Sbjct: 263 agtggtcggcgatcgcgacgcacctgccggggaggacggacaacgagatcaagaacttct 322
Query: 642 ggaactcgcacctca 656
||||| |||||||||
Sbjct: 323 ggaacacgcacctca 337
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 85.7 bits (43), Expect = 7e-014
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 578 aacaggtggtccctgatcgccagccacctccccggccgaacagacaacgagatcaagaac 637
|||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 114412 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 114471
Query: 638 tactgga 644
|||||||
Sbjct: 114472 tactgga 114478
Score = 75.8 bits (38), Expect = 7e-011
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 412 gcacggcgaggggtcctggaggtcgctgcccaagaatgcaggcctgctccggtgcggcaa 471
|||||||||||| | |||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 12453754 gcacggcgagggttgctggcggtcgctgcccaaggcggcggggctcctccgctgcggcaa 12453813
Query: 472 gagctgccggctccggtggatcaactacct 501
||||||||| ||||| ||||| ||||||||
Sbjct: 12453814 gagctgccgcctccgctggatgaactacct 12453843
Score = 69.9 bits (35), Expect = 4e-009
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcacctcagc 658
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 3318294 gacaacgagatcaagaactactggaactcgcatctcagc 3318332
Score = 67.9 bits (34), Expect = 2e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 452 ggcctgctccggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 3318033 ggcctgctgcgctgcggcaagagctgccgcctccggtggatgaactacct 3318082
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 461 cggtgcggcaagagctgccggctccggtggatcaactacct 501
|||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 4638996 cggtgcggcaagagctgccgcctccggtggctcaactacct 4639036
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 462 ggtgcggcaagagctgccggctccggtggatcaactacct 501
||||||||||||||||| |||| |||||||||||||||||
Sbjct: 3654686 ggtgcggcaagagctgcaggctgcggtggatcaactacct 3654647
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaactcgcac 652
||||||||||||||||||||||||||| |||||
Sbjct: 12454044 gacaacgagatcaagaactactggaacacgcac 12454076
Score = 56.0 bits (28), Expect = 6e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 459 tccggtgcggcaagagctgccggctccggtgg 490
|||||||||||||||||||||| |||||||||
Sbjct: 9030944 tccggtgcggcaagagctgccgcctccggtgg 9030975
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 605 ctccccggccgaacagacaacgagatcaagaactactggaac 646
||||||||||| || |||||||| |||||||||||||||||
Sbjct: 4639248 ctccccggccggacggacaacgacgtcaagaactactggaac 4639289
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 319 gatggggagggcgccgtgctgcgagaagg 347
|||||||||||||||||||||||| ||||
Sbjct: 2771460 gatggggagggcgccgtgctgcgacaagg 2771488
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||| |||||||||||||||
Sbjct: 4643459 gacaacgagattaagaactactggaac 4643485
Score = 46.1 bits (23), Expect = 0.059
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 467 ggcaagagctgccggctccggtggatcaactacct 501
|||||||||||| |||| ||||||||||||||||
Sbjct: 3991287 ggcaagagctgcaggctgaggtggatcaactacct 3991321
Score = 46.1 bits (23), Expect = 0.059
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 620 gacaacgagatcaagaactactggaac 646
||||||||||||||||||| |||||||
Sbjct: 3654407 gacaacgagatcaagaacttctggaac 3654381
Score = 44.1 bits (22), Expect = 0.23
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 318 cgatggggagggcgccgtgctgcgagaagg 347
||||||||||| ||||||||||||| ||||
Sbjct: 4638528 cgatggggaggtcgccgtgctgcgacaagg 4638557
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,736,098
Number of Sequences: 438736
Number of extensions: 2736098
Number of successful extensions: 32981
Number of sequences better than 0.5: 569
Number of HSP's better than 0.5 without gapping: 670
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 21780
Number of HSP's gapped (non-prelim): 11118
length of query: 1601
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1579
effective length of database: 2,790,767,724
effective search space: 4406622236196
effective search space used: 4406622236196
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)