BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= C4H2
(1794 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AACV01012893.1| Oryza sativa (japonica cultivar-group) c... 673 0.0
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 673 0.0
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 673 0.0
dbj|AP003446.3| Oryza sativa (japonica cultivar-group) geno... 673 0.0
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 673 0.0
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 673 0.0
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 673 0.0
dbj|AP003302.2| Oryza sativa (japonica cultivar-group) geno... 557 e-156
gb|CA754722.1|CA754722 BR030005000_PLATE_G07_55_055.ab1 OA ... 351 7e-094
dbj|AK100598.1| Oryza sativa (japonica cultivar-group) cDNA... 351 7e-094
dbj|AK104994.2| Oryza sativa (japonica cultivar-group) cDNA... 351 7e-094
gb|AACV01011747.1| Oryza sativa (japonica cultivar-group) c... 351 7e-094
gb|AC136224.2| Oryza sativa (japonica cultivar-group) chrom... 351 7e-094
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 351 7e-094
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 351 7e-094
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 351 7e-094
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 351 7e-094
dbj|AP004859.1| Oryza sativa (japonica cultivar-group) chro... 159 6e-036
dbj|AK072588.1| Oryza sativa (japonica cultivar-group) cDNA... 159 6e-036
dbj|AP004850.3| Oryza sativa (japonica cultivar-group) geno... 159 6e-036
gb|AACV01004242.1| Oryza sativa (japonica cultivar-group) c... 159 6e-036
ref|XM_465538.1| Oryza sativa (japonica cultivar-group), mRNA 159 6e-036
ref|XM_465542.1| Oryza sativa (japonica cultivar-group), mRNA 159 6e-036
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 159 6e-036
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 159 6e-036
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 159 6e-036
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 159 6e-036
gb|AACV01004243.1| Oryza sativa (japonica cultivar-group) c... 153 4e-034
gb|AACV01004244.1| Oryza sativa (japonica cultivar-group) c... 74 3e-010
gb|AQ576280.1|AQ576280 nbxb0088L20r CUGI Rice BAC Library O... 70 4e-009
gb|AQ256364.1|AQ256364 nbxb0016O01r CUGI Rice BAC Library O... 68 2e-008
gb|AQ289078.1|AQ289078 nbxb0034K09r CUGI Rice BAC Library O... 68 2e-008
gb|AU058037.1|AU058037 AU058037 Rice callus Oryza sativa (j... 62 1e-006
dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
gb|AACV01001578.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
ref|NM_193526.1| Oryza sativa (japonica cultivar-group), p... 62 1e-006
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 62 1e-006
dbj|AP003267.3| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
emb|AL607097.1|OSJN01006 Oryza sativa (japonica cultivar-gr... 54 3e-004
dbj|AK099468.1| Oryza sativa (japonica cultivar-group) cDNA... 54 3e-004
dbj|AK105993.1| Oryza sativa (japonica cultivar-group) cDNA... 54 3e-004
dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA... 54 3e-004
dbj|AP005621.2| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
dbj|AP005308.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
dbj|AP005575.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
gb|AACV01020124.1| Oryza sativa (japonica cultivar-group) c... 54 3e-004
dbj|AP002842.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 54 3e-004
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 54 3e-004
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 48 0.016
dbj|AP003711.3| Oryza sativa (japonica cultivar-group) geno... 48 0.016
gb|AACV01014544.1| Oryza sativa (japonica cultivar-group) c... 48 0.016
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.016
gb|AU093333.1|AU093333 AU093333 Rice callus Oryza sativa (j... 46 0.065
dbj|AK072715.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.26
dbj|AK103567.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.26
dbj|AK119264.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.26
dbj|AP005464.3| Oryza sativa (japonica cultivar-group) geno... 44 0.26
dbj|AB096259.1| Oryza sativa (japonica cultivar-group) PLA1... 44 0.26
gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbar... 44 0.26
dbj|AP006265.2| Oryza sativa (japonica cultivar-group) geno... 44 0.26
dbj|AP004704.3| Oryza sativa (japonica cultivar-group) geno... 44 0.26
dbj|AP004878.3| Oryza sativa (japonica cultivar-group) geno... 44 0.26
gb|AACV01002167.1| Oryza sativa (japonica cultivar-group) c... 44 0.26
gb|AACV01005659.1| Oryza sativa (japonica cultivar-group) c... 44 0.26
gb|AACV01018966.1| Oryza sativa (japonica cultivar-group) c... 44 0.26
gb|AACV01025745.1| Oryza sativa (japonica cultivar-group) C... 44 0.26
gb|AACV01026671.1| Oryza sativa (japonica cultivar-group) C... 44 0.26
ref|NM_192202.1| Oryza sativa (japonica cultivar-group), p... 44 0.26
ref|NM_196400.1| Oryza sativa (japonica cultivar-group) put... 44 0.26
ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chr... 44 0.26
ref|XM_468445.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.26
ref|XM_481957.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.26
ref|XM_483653.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.26
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 44 0.26
dbj|AP004020.3| Oryza sativa (japonica cultivar-group) geno... 44 0.26
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 44 0.26
dbj|AP003254.3| Oryza sativa (japonica cultivar-group) geno... 44 0.26
dbj|AP003378.4| Oryza sativa (japonica cultivar-group) geno... 44 0.26
gb|CH401311.1| Oryza sativa (japonica cultivar-group) scaff... 44 0.26
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.26
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.26
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.26
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 44 0.26
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.26
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.26
dbj|AP004142.1| Oryza sativa (japonica cultivar-group) chro... 42 1.0
dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA... 42 1.0
dbj|AP004617.2| Oryza sativa (japonica cultivar-group) geno... 42 1.0
dbj|AP003909.3| Oryza sativa (japonica cultivar-group) geno... 42 1.0
dbj|AP005570.3| Oryza sativa (japonica cultivar-group) geno... 42 1.0
dbj|AP003523.3| Oryza sativa (japonica cultivar-group) geno... 42 1.0
dbj|AP002069.2| Oryza sativa (japonica cultivar-group) geno... 42 1.0
gb|AACV01014662.1| Oryza sativa (japonica cultivar-group) c... 42 1.0
gb|AACV01017031.1| Oryza sativa (japonica cultivar-group) c... 42 1.0
gb|AACV01017100.1| Oryza sativa (japonica cultivar-group) c... 42 1.0
gb|AACV01018515.1| Oryza sativa (japonica cultivar-group) c... 42 1.0
gb|AACV01020088.1| Oryza sativa (japonica cultivar-group) c... 42 1.0
ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.0
ref|XM_479689.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.0
ref|XM_482511.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.0
dbj|AP003019.1| Oryza sativa (japonica cultivar-group) geno... 42 1.0
ref|NM_185689.1| Oryza sativa (japonica cultivar-group), Oz... 42 1.0
ref|NM_185699.1| Oryza sativa (japonica cultivar-group), Oz... 42 1.0
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 42 1.0
dbj|AP005099.2| Oryza sativa (japonica cultivar-group) geno... 42 1.0
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 42 1.0
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 42 1.0
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 42 1.0
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 42 1.0
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 42 1.0
gb|AQ328148.1|AQ328148 nbxb0042D19f CUGI Rice BAC Library O... 40 4.0
gb|AQ862180.1|AQ862180 nbeb0018K08f CUGI Rice BAC Library (... 40 4.0
gb|AZ126077.1|AZ126077 OSJNBb0072F16r CUGI Rice BAC Library... 40 4.0
gb|C73224.1|C73224 C73224 Rice panicle at flowering stage O... 40 4.0
gb|AU070205.1|AU070205 AU070205 Rice root Oryza sativa (jap... 40 4.0
gb|CB654836.1|CB654836 OSJNEc07K13.f OSJNEc Oryza sativa (j... 40 4.0
dbj|AP002912.2| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP005975.1| Oryza sativa (japonica cultivar-group) chro... 40 4.0
dbj|AK068281.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.0
dbj|AK103707.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.0
dbj|AK110189.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.0
dbj|AK120073.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.0
gb|AC092749.1| Genomic sequence for Oryza sativa (japonica ... 40 4.0
gb|AC087543.3| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromoso... 40 4.0
dbj|AP005845.2| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP006451.3| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP005604.3| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP003835.4| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP005309.5| Oryza sativa (japonica cultivar-group) geno... 40 4.0
gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 ... 40 4.0
ref|NT_079876.2| Oryza sativa (japonica cultivar-group) 40 4.0
dbj|AP005833.2| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP003574.3| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP004732.3| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP006850.2| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP003571.4| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP003406.3| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP002521.1| Oryza sativa (japonica cultivar-group) geno... 40 4.0
gb|AACV01000243.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01000254.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01000448.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01002465.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01004491.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01013890.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01014651.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01014656.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01015296.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01020062.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01021311.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01021691.1| Oryza sativa (japonica cultivar-group) c... 40 4.0
gb|AACV01031567.1| Oryza sativa (japonica cultivar-group) C... 40 4.0
dbj|AP003301.3| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP003339.4| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP003209.3| Oryza sativa (japonica cultivar-group) geno... 40 4.0
ref|NM_195945.1| Oryza sativa (japonica cultivar-group) put... 40 4.0
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 40 4.0
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 40 4.0
ref|XM_465978.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
ref|XM_476462.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
ref|XM_476478.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
ref|XM_476885.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 40 4.0
ref|NT_107204.1| Oryza sativa (japonica cultivar-group) 40 4.0
ref|NM_184481.2| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
ref|NM_184524.2| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 40 4.0
dbj|AP001633.2| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP003861.2| Oryza sativa (japonica cultivar-group) geno... 40 4.0
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 40 4.0
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 40 4.0
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 40 4.0
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 40 4.0
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.0
>gb|AACV01012893.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg012893, whole
genome shotgun sequence
Length = 103032
Score = 673 bits (339), Expect = 0.0
Identities = 521/582 (89%), Gaps = 2/582 (0%)
Strand = Plus / Plus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 15302 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 15361
Query: 1051 ccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggcca 1110
|||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||| |
Sbjct: 15362 ccacggggagatccaggagaagctgcgccgggagctggacacggtgctcggcccggggcg 15421
Query: 1111 ccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagac 1170
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 15422 tcagatcacggagccggacacgcacaggctcccctacctgcaggccgtggtcaaggagac 15481
Query: 1171 gctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaa 1230
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 15482 gctccggctgcgcatggccatcccgctgctggtgccgcacatgaacctccgcgacgccga 15541
Query: 1231 gctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgc 1290
||||| ||| |||| ||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 15542 gctcgccgggtacggcatccccgccgagagcaaggtgctcgtcaacgcgtggtacctcgc 15601
Query: 1291 caacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgagga 1350
|||| |||||| | ||| ||||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 15602 caacgaccccgggcggtggcggcggccggaggagttccggccggagaggttcctcgagga 15661
Query: 1351 ggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccg 1410
||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||| ||
Sbjct: 15662 ggagaggaacgtcgaggccaacggcaacgacttcaggtacctgccgtccggcgccgggcg 15721
Query: 1411 caggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcct 1470
||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 15722 gcggagctgccccggcatcgtcctcgcgctgcccatcctcggcgtcaccatcggccgcct 15781
Query: 1471 cgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaa 1530
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 15782 cgtccagaacttcgagctgctgccgccgcccgggaaggacagggtcgacaccaccgagaa 15841
Query: 1531 gggaggccagttcagtctccacatcttgaagcattccaccat 1572
||| || |||||||| ||||||||| ||||||| ||||||||
Sbjct: 15842 gggtgggcagttcagcctccacatcctgaagcactccaccat 15883
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Plus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 14235 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 14294
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 14295 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 14354
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14355 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 14414
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 14415 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 14474
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 14475 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 14534
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 14535 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 14594
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 14595 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 14654
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 14655 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 14711
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Plus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 14738 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 14797
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 14798 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 14857
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 14858 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 14917
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 14918 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 14977
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 14978 ggacttcttcctcgaggagaggaag 15002
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 15098 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 15157
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 15158 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 15217
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 15218 catcaatgttgc 15229
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 673 bits (339), Expect = 0.0
Identities = 521/582 (89%), Gaps = 2/582 (0%)
Strand = Plus / Minus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 35036511 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 35036452
Query: 1051 ccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggcca 1110
|||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||| |
Sbjct: 35036451 ccacggggagatccaggagaagctgcgccgggagctggacacggtgctcggcccggggcg 35036392
Query: 1111 ccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagac 1170
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 35036391 tcagatcacggagccggacacgcacaggctcccctacctgcaggccgtggtcaaggagac 35036332
Query: 1171 gctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaa 1230
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 35036331 gctccggctgcgcatggccatcccgctgctggtgccgcacatgaacctccgcgacgccga 35036272
Query: 1231 gctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgc 1290
||||| ||| |||| ||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 35036271 gctcgccgggtacggcatccccgccgagagcaaggtgctcgtcaacgcgtggtacctcgc 35036212
Query: 1291 caacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgagga 1350
|||| |||||| | ||| ||||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 35036211 caacgaccccgggcggtggcggcggccggaggagttccggccggagaggttcctcgagga 35036152
Query: 1351 ggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccg 1410
||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||| ||
Sbjct: 35036151 ggagaggaacgtcgaggccaacggcaacgacttcaggtacctgccgtccggcgccgggcg 35036092
Query: 1411 caggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcct 1470
||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 35036091 gcggagctgccccggcatcgtcctcgcgctgcccatcctcggcgtcaccatcggccgcct 35036032
Query: 1471 cgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaa 1530
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 35036031 cgtccagaacttcgagctgctgccgccgcccgggaaggacagggtcgacaccaccgagaa 35035972
Query: 1531 gggaggccagttcagtctccacatcttgaagcattccaccat 1572
||| || |||||||| ||||||||| ||||||| ||||||||
Sbjct: 35035971 gggtgggcagttcagcctccacatcctgaagcactccaccat 35035930
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Minus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 35037578 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 35037519
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 35037518 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 35037459
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 35037458 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 35037399
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 35037398 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 35037339
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 35037338 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 35037279
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 35037278 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 35037219
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 35037218 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 35037159
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 35037158 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 35037102
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Minus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 35037075 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 35037016
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 35037015 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 35036956
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 35036955 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 35036896
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 35036895 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 35036836
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 35036835 ggacttcttcctcgaggagaggaag 35036811
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Minus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 35036715 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 35036656
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 35036655 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 35036596
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 35036595 catcaatgttgc 35036584
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 21417672 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 21417630
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 29066357 ggtgatcaaggagacgctccggctgc 29066382
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 33311126 acaactacggcgacttcatc 33311145
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 6339934 tgcaggcggtgatcaaggag 6339953
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3442295 acaactacggcgacttcatc 3442314
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3187001 acaactacggcgacttcatc 3186982
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 673 bits (339), Expect = 0.0
Identities = 521/582 (89%), Gaps = 2/582 (0%)
Strand = Plus / Minus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 9483894 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 9483835
Query: 1051 ccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggcca 1110
|||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||| |
Sbjct: 9483834 ccacggggagatccaggagaagctgcgccgggagctggacacggtgctcggcccggggcg 9483775
Query: 1111 ccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagac 1170
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 9483774 tcagatcacggagccggacacgcacaggctcccctacctgcaggccgtggtcaaggagac 9483715
Query: 1171 gctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaa 1230
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 9483714 gctccggctgcgcatggccatcccgctgctggtgccgcacatgaacctccgcgacgccga 9483655
Query: 1231 gctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgc 1290
||||| ||| |||| ||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 9483654 gctcgccgggtacggcatccccgccgagagcaaggtgctcgtcaacgcgtggtacctcgc 9483595
Query: 1291 caacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgagga 1350
|||| |||||| | ||| ||||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 9483594 caacgaccccgggcggtggcggcggccggaggagttccggccggagaggttcctcgagga 9483535
Query: 1351 ggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccg 1410
||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||| ||
Sbjct: 9483534 ggagaggaacgtcgaggccaacggcaacgacttcaggtacctgccgtccggcgccgggcg 9483475
Query: 1411 caggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcct 1470
||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 9483474 gcggagctgccccggcatcgtcctcgcgctgcccatcctcggcgtcaccatcggccgcct 9483415
Query: 1471 cgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaa 1530
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 9483414 cgtccagaacttcgagctgctgccgccgcccgggaaggacagggtcgacaccaccgagaa 9483355
Query: 1531 gggaggccagttcagtctccacatcttgaagcattccaccat 1572
||| || |||||||| ||||||||| ||||||| ||||||||
Sbjct: 9483354 gggtgggcagttcagcctccacatcctgaagcactccaccat 9483313
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Minus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 9484961 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 9484902
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 9484901 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 9484842
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9484841 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 9484782
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 9484781 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 9484722
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 9484721 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 9484662
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 9484661 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 9484602
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 9484601 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 9484542
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 9484541 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 9484485
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Minus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 9484458 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 9484399
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 9484398 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 9484339
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 9484338 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 9484279
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9484278 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 9484219
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 9484218 ggacttcttcctcgaggagaggaag 9484194
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Minus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 9484098 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 9484039
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 9484038 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 9483979
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 9483978 catcaatgttgc 9483967
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 3513740 ggtgatcaaggagacgctccggctgc 3513765
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 7758509 acaactacggcgacttcatc 7758528
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1529_G03
Length = 100635
Score = 673 bits (339), Expect = 0.0
Identities = 521/582 (89%), Gaps = 2/582 (0%)
Strand = Plus / Minus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 85205 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 85146
Query: 1051 ccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggcca 1110
|||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||| |
Sbjct: 85145 ccacggggagatccaggagaagctgcgccgggagctggacacggtgctcggcccggggcg 85086
Query: 1111 ccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagac 1170
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 85085 tcagatcacggagccggacacgcacaggctcccctacctgcaggccgtggtcaaggagac 85026
Query: 1171 gctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaa 1230
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 85025 gctccggctgcgcatggccatcccgctgctggtgccgcacatgaacctccgcgacgccga 84966
Query: 1231 gctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgc 1290
||||| ||| |||| ||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 84965 gctcgccgggtacggcatccccgccgagagcaaggtgctcgtcaacgcgtggtacctcgc 84906
Query: 1291 caacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgagga 1350
|||| |||||| | ||| ||||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 84905 caacgaccccgggcggtggcggcggccggaggagttccggccggagaggttcctcgagga 84846
Query: 1351 ggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccg 1410
||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||| ||
Sbjct: 84845 ggagaggaacgtcgaggccaacggcaacgacttcaggtacctgccgtccggcgccgggcg 84786
Query: 1411 caggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcct 1470
||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 84785 gcggagctgccccggcatcgtcctcgcgctgcccatcctcggcgtcaccatcggccgcct 84726
Query: 1471 cgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaa 1530
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 84725 cgtccagaacttcgagctgctgccgccgcccgggaaggacagggtcgacaccaccgagaa 84666
Query: 1531 gggaggccagttcagtctccacatcttgaagcattccaccat 1572
||| || |||||||| ||||||||| ||||||| ||||||||
Sbjct: 84665 gggtgggcagttcagcctccacatcctgaagcactccaccat 84624
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Minus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 86272 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 86213
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 86212 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 86153
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 86152 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 86093
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 86092 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 86033
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 86032 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 85973
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 85972 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 85913
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 85912 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 85853
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 85852 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 85796
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Minus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 85769 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 85710
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 85709 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 85650
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 85649 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 85590
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 85589 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 85530
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 85529 ggacttcttcctcgaggagaggaag 85505
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Minus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 85409 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 85350
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 85349 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 85290
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 85289 catcaatgttgc 85278
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046
genomic scaffold, whole genome shotgun sequence
Length = 8607552
Score = 673 bits (339), Expect = 0.0
Identities = 521/582 (89%), Gaps = 2/582 (0%)
Strand = Plus / Plus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 773812 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 773871
Query: 1051 ccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggcca 1110
|||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||| |
Sbjct: 773872 ccacggggagatccaggagaagctgcgccgggagctggacacggtgctcggcccggggcg 773931
Query: 1111 ccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagac 1170
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 773932 tcagatcacggagccggacacgcacaggctcccctacctgcaggccgtggtcaaggagac 773991
Query: 1171 gctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaa 1230
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 773992 gctccggctgcgcatggccatcccgctgctggtgccgcacatgaacctccgcgacgccga 774051
Query: 1231 gctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgc 1290
||||| ||| |||| ||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 774052 gctcgccgggtacggcatccccgccgagagcaaggtgctcgtcaacgcgtggtacctcgc 774111
Query: 1291 caacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgagga 1350
|||| |||||| | ||| ||||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 774112 caacgaccccgggcggtggcggcggccggaggagttccggccggagaggttcctcgagga 774171
Query: 1351 ggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccg 1410
||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||| ||
Sbjct: 774172 ggagaggaacgtcgaggccaacggcaacgacttcaggtacctgccgtccggcgccgggcg 774231
Query: 1411 caggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcct 1470
||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 774232 gcggagctgccccggcatcgtcctcgcgctgcccatcctcggcgtcaccatcggccgcct 774291
Query: 1471 cgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaa 1530
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 774292 cgtccagaacttcgagctgctgccgccgcccgggaaggacagggtcgacaccaccgagaa 774351
Query: 1531 gggaggccagttcagtctccacatcttgaagcattccaccat 1572
||| || |||||||| ||||||||| ||||||| ||||||||
Sbjct: 774352 gggtgggcagttcagcctccacatcctgaagcactccaccat 774393
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Plus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 772745 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 772804
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 772805 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 772864
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 772865 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 772924
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 772925 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 772984
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 772985 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 773044
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 773045 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 773104
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 773105 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 773164
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 773165 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 773221
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Plus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 773248 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 773307
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 773308 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 773367
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 773368 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 773427
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 773428 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 773487
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 773488 ggacttcttcctcgaggagaggaag 773512
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 773608 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 773667
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 773668 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 773727
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 773728 catcaatgttgc 773739
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 673 bits (339), Expect = 0.0
Identities = 521/582 (89%), Gaps = 2/582 (0%)
Strand = Plus / Plus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 773812 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 773871
Query: 1051 ccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggcca 1110
|||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||| |
Sbjct: 773872 ccacggggagatccaggagaagctgcgccgggagctggacacggtgctcggcccggggcg 773931
Query: 1111 ccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagac 1170
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 773932 tcagatcacggagccggacacgcacaggctcccctacctgcaggccgtggtcaaggagac 773991
Query: 1171 gctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaa 1230
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 773992 gctccggctgcgcatggccatcccgctgctggtgccgcacatgaacctccgcgacgccga 774051
Query: 1231 gctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgc 1290
||||| ||| |||| ||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 774052 gctcgccgggtacggcatccccgccgagagcaaggtgctcgtcaacgcgtggtacctcgc 774111
Query: 1291 caacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgagga 1350
|||| |||||| | ||| ||||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 774112 caacgaccccgggcggtggcggcggccggaggagttccggccggagaggttcctcgagga 774171
Query: 1351 ggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccg 1410
||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||| ||
Sbjct: 774172 ggagaggaacgtcgaggccaacggcaacgacttcaggtacctgccgtccggcgccgggcg 774231
Query: 1411 caggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcct 1470
||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 774232 gcggagctgccccggcatcgtcctcgcgctgcccatcctcggcgtcaccatcggccgcct 774291
Query: 1471 cgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaa 1530
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 774292 cgtccagaacttcgagctgctgccgccgcccgggaaggacagggtcgacaccaccgagaa 774351
Query: 1531 gggaggccagttcagtctccacatcttgaagcattccaccat 1572
||| || |||||||| ||||||||| ||||||| ||||||||
Sbjct: 774352 gggtgggcagttcagcctccacatcctgaagcactccaccat 774393
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Plus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 772745 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 772804
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 772805 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 772864
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 772865 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 772924
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 772925 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 772984
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 772985 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 773044
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 773045 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 773104
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 773105 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 773164
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 773165 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 773221
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Plus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 773248 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 773307
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 773308 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 773367
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 773368 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 773427
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 773428 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 773487
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 773488 ggacttcttcctcgaggagaggaag 773512
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 773608 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 773667
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 773668 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 773727
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 773728 catcaatgttgc 773739
Score = 48.1 bits (24), Expect = 0.016
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 23183876 cctcccgtacctgcaggccgtggcgaaggagacgctgcggctgc 23183833
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 530 gaggccgaggccgccgccgtcgtcg 554
|||||||||||||||||| ||||||
Sbjct: 24816276 gaggccgaggccgccgccctcgtcg 24816252
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 24739030 gcccgaggagttccggccagagcg 24739053
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 24697080 gcccgaggagttccggccggagcg 24697103
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||||||||||||||| |||||
Sbjct: 14120122 tccggctgcctcccggcctcgtcc 14120145
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 673 bits (339), Expect = 0.0
Identities = 521/582 (89%), Gaps = 2/582 (0%)
Strand = Plus / Minus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 34955841 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 34955782
Query: 1051 ccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggcca 1110
|||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||| |
Sbjct: 34955781 ccacggggagatccaggagaagctgcgccgggagctggacacggtgctcggcccggggcg 34955722
Query: 1111 ccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagac 1170
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 34955721 tcagatcacggagccggacacgcacaggctcccctacctgcaggccgtggtcaaggagac 34955662
Query: 1171 gctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaa 1230
||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 34955661 gctccggctgcgcatggccatcccgctgctggtgccgcacatgaacctccgcgacgccga 34955602
Query: 1231 gctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgc 1290
||||| ||| |||| ||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 34955601 gctcgccgggtacggcatccccgccgagagcaaggtgctcgtcaacgcgtggtacctcgc 34955542
Query: 1291 caacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgagga 1350
|||| |||||| | ||| ||||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 34955541 caacgaccccgggcggtggcggcggccggaggagttccggccggagaggttcctcgagga 34955482
Query: 1351 ggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccg 1410
||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||| ||
Sbjct: 34955481 ggagaggaacgtcgaggccaacggcaacgacttcaggtacctgccgtccggcgccgggcg 34955422
Query: 1411 caggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcct 1470
||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 34955421 gcggagctgccccggcatcgtcctcgcgctgcccatcctcggcgtcaccatcggccgcct 34955362
Query: 1471 cgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaa 1530
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 34955361 cgtccagaacttcgagctgctgccgccgcccgggaaggacagggtcgacaccaccgagaa 34955302
Query: 1531 gggaggccagttcagtctccacatcttgaagcattccaccat 1572
||| || |||||||| ||||||||| ||||||| ||||||||
Sbjct: 34955301 gggtgggcagttcagcctccacatcctgaagcactccaccat 34955260
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Minus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 34956908 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 34956849
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 34956848 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 34956789
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 34956788 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 34956729
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 34956728 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 34956669
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 34956668 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 34956609
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 34956608 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 34956549
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 34956548 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 34956489
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 34956488 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 34956432
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Minus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 34956405 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 34956346
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 34956345 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 34956286
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 34956285 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 34956226
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 34956225 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 34956166
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 34956165 ggacttcttcctcgaggagaggaag 34956141
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Minus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 34956045 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 34955986
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 34955985 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 34955926
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 34955925 catcaatgttgc 34955914
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 21338955 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 21338913
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 28985687 ggtgatcaaggagacgctccggctgc 28985712
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 33230456 acaactacggcgacttcatc 33230475
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 6342152 tgcaggcggtgatcaaggag 6342171
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3444493 acaactacggcgacttcatc 3444512
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3189199 acaactacggcgacttcatc 3189180
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0703B11
Length = 144074
Score = 557 bits (281), Expect = e-156
Identities = 428/477 (89%)
Strand = Plus / Minus
Query: 73 cgtcgccatggtccttctcttcgtggagaagctcctggtcggcctcttggcgtccgtcat 132
||||||||||| ||| ||||||||||||| |||||| ||||||||| | || ||| | |
Sbjct: 1136 cgtcgccatggacctcctcttcgtggagaggctcctcgtcggcctcctcgcagccgccgt 1077
Query: 133 ggtcgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgt 192
|||||| ||||| ||||||||| |||| ||||| |||||||| ||||| |||||||||
Sbjct: 1076 ggtcgcgatcgccgtgtccaagctccgcggccggaagctccgcctgccacccggccccac 1017
Query: 193 ccccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 cccggtgcccgtcttcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 957
Query: 253 cgccgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacct 312
|| |||||| | || | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 956 ggcggcgctggcgcggaggttcggcgacatcttcctcctccggatggggcagcgcaacct 897
Query: 313 ggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagtt 372
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 896 ggtggtggtctcctcgccgccgctggcgcgggaggtgctccacacgcagggggtggagtt 837
Query: 373 cggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggt 432
||| || ||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 836 cgggtcgcgcacccgcaacgtggtgttcgacatcttcaccggcaaggggcaggacatggt 777
Query: 433 gttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttctt 492
||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 776 gttcaccgtgtacggcgaccactggcgaaagatgcggcggatcatgacggtgccgttctt 717
Query: 493 caccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgt 549
|||| |||||| ||||||| | ||||| ||| ||||||||||||||||| |||||
Sbjct: 716 caccggcaaggtggtgcagcggcaccgcgccgggtgggaggccgaggccgcggccgt 660
Score = 407 bits (205), Expect = e-110
Identities = 250/265 (94%)
Strand = Plus / Minus
Query: 601 ccgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcg 660
|||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 633 ccgccgccgcctgcagctcatgatgtacagcaacgtgtaccgcatcatgttcgaccgccg 574
Query: 661 cttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcag 720
||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 573 gttcgagagcgcggacgacccgctgttcctccgcctcaaggcgctcaacggcgagcgcag 514
Query: 721 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgtt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 513 ccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgcccctt 454
Query: 781 cctccgcggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaa 840
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 453 cctccgcggctacctcaggatctgcgaggaggtcaaggagacccgcctcaagctcttcaa 394
Query: 841 ggatttcttcctcgaggagaggaag 865
||| |||||||||||||||||||||
Sbjct: 393 ggacttcttcctcgaggagaggaag 369
Score = 159 bits (80), Expect = 6e-036
Identities = 119/132 (90%)
Strand = Plus / Minus
Query: 865 gaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcacat 924
|||||| |||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 273 gaagctagcgagcaccaaggccatggacaacaatgggctcaaatgcgccattgatcacat 214
Query: 925 actggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaa 984
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 213 cctggaggcgcagcagaagggggagatcaacgaggacaacgtgctctacattgtcgagaa 154
Query: 985 cattaacgttgc 996
||| || |||||
Sbjct: 153 catcaatgttgc 142
Score = 73.9 bits (37), Expect = 3e-010
Identities = 58/64 (90%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagct--ggtgaa 1050
|||||||||||||||| |||||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 69 ttgcagcgatcgagacgacgctgtggtcgatggagtgggcgatcgcggagctagggtgaa 10
Query: 1051 ccac 1054
||||
Sbjct: 9 ccac 6
>gb|CA754722.1|CA754722 BR030005000_PLATE_G07_55_055.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030005000_PLATE_G07_55_055.ab1 similar to cinnamic acid
4-hydroxylase [Sorghum bicolor], mRNA sequence
Length = 626
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 111 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 170
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 171 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 230
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 231 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 290
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 291 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 350
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 351 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 410
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 411 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 470
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 471 atggacaaggtggacaccaccgagaagcccggccagttcag 511
>dbj|AK100598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C01, full
insert sequence
Length = 1838
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 1128 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 1187
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 1188 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 1247
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 1248 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 1307
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 1308 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 1367
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 1368 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 1427
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1428 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 1487
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 1488 atggacaaggtggacaccaccgagaagcccggccagttcag 1528
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 341 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 400
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 460
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 461 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 502
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Plus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 610 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 669
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 670 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 729
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 730 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 789
Query: 792 acctc 796
|||||
Sbjct: 790 acctc 794
Score = 125 bits (63), Expect = 8e-026
Identities = 129/151 (85%)
Strand = Plus / Plus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 893 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 952
Query: 967 gctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcga 1026
|||| ||||||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 953 cctctacatcgtcgagaacatcaacgttgctgctatcgagacgacgctgtggtcgatcga 1012
Query: 1027 gtgggcggtcgctgagctggtgaaccacccg 1057
|||| |||| ||||||||||||||||||
Sbjct: 1013 atggggaatcgcggagctggtgaaccacccg 1043
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 167 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 226
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 227 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 286
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 287 cctccgcatgggcgtccgcaacctggtggtggt 319
>dbj|AK104994.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H11, full
insert sequence
Length = 1796
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 1130 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 1189
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 1190 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 1249
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 1250 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 1309
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 1310 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 1369
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 1370 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 1429
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1430 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 1489
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 1490 atggacaaggtggacaccaccgagaagcccggccagttcag 1530
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 343 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 402
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 463 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 504
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Plus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 612 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 671
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 672 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 731
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 732 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 791
Query: 792 acctc 796
|||||
Sbjct: 792 acctc 796
Score = 125 bits (63), Expect = 8e-026
Identities = 129/151 (85%)
Strand = Plus / Plus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 895 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 954
Query: 967 gctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcga 1026
|||| ||||||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 955 cctctacatcgtcgagaacatcaacgttgctgctatcgagacgacgctgtggtcgatcga 1014
Query: 1027 gtgggcggtcgctgagctggtgaaccacccg 1057
|||| |||| ||||||||||||||||||
Sbjct: 1015 atggggaatcgcggagctggtgaaccacccg 1045
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 169 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 228
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 229 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 288
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 289 cctccgcatgggcgtccgcaacctggtggtggt 321
>gb|AACV01011747.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011747, whole
genome shotgun sequence
Length = 14985
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 14374 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 14433
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 14434 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 14493
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 14494 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 14553
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 14554 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 14613
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 14614 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 14673
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 14674 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 14733
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 14734 atggacaaggtggacaccaccgagaagcccggccagttcag 14774
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 10866 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 10925
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10926 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 10985
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 10986 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 11027
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Plus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 11135 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 11194
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 11195 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 11254
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 11255 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 11314
Query: 792 acctc 796
|||||
Sbjct: 11315 acctc 11319
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 10692 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 10751
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 10752 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 10811
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 10812 cctccgcatgggcgtccgcaacctggtggtggt 10844
Score = 71.9 bits (36), Expect = 1e-009
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 14226 tgcagctatcgagacgacgctgtggtcgatcgaatggggaatcgcggagctggtgaacca 14285
Query: 1054 cccg 1057
||||
Sbjct: 14286 cccg 14289
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 13054 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 13113
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 13114 cctctacatcgtcgagaacatcaacgttgc 13143
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22,
complete sequence
Length = 166052
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 102658 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 102599
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 102598 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 102539
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 102538 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 102479
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 102478 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 102419
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 102418 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 102359
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 102358 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 102299
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 102298 atggacaaggtggacaccaccgagaagcccggccagttcag 102258
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 106166 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 106107
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106106 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 106047
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 106046 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 106005
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Minus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 105897 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 105838
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 105837 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 105778
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 105777 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 105718
Query: 792 acctc 796
|||||
Sbjct: 105717 acctc 105713
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Minus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 106340 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 106281
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 106280 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 106221
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 106220 cctccgcatgggcgtccgcaacctggtggtggt 106188
Score = 71.9 bits (36), Expect = 1e-009
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 102806 tgcagctatcgagacgacgctgtggtcgatcgaatggggaatcgcggagctggtgaacca 102747
Query: 1054 cccg 1057
||||
Sbjct: 102746 cccg 102743
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 103978 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 103919
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 103918 cctctacatcgtcgagaacatcaacgttgc 103889
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 2300399 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 2300340
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 2300339 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 2300280
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 2300279 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 2300220
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2300219 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 2300160
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 2300159 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 2300100
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 2300099 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 2300040
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 2300039 atggacaaggtggacaccaccgagaagcccggccagttcag 2299999
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 2303907 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 2303848
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303847 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 2303788
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 2303787 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 2303746
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Minus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 2303638 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 2303579
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 2303578 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 2303519
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 2303518 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 2303459
Query: 792 acctc 796
|||||
Sbjct: 2303458 acctc 2303454
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Minus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 2304081 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 2304022
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 2304021 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 2303962
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 2303961 cctccgcatgggcgtccgcaacctggtggtggt 2303929
Score = 71.9 bits (36), Expect = 1e-009
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 2300547 tgcagctatcgagacgacgctgtggtcgatcgaatggggaatcgcggagctggtgaacca 2300488
Query: 1054 cccg 1057
||||
Sbjct: 2300487 cccg 2300484
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 2301719 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 2301660
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 2301659 cctctacatcgtcgagaacatcaacgttgc 2301630
>gb|CH401204.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000041 genomic
scaffold, whole genome shotgun sequence
Length = 2540762
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 2244978 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 2244919
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 2244918 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 2244859
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 2244858 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 2244799
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2244798 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 2244739
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 2244738 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 2244679
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 2244678 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 2244619
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 2244618 atggacaaggtggacaccaccgagaagcccggccagttcag 2244578
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 2248486 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 2248427
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248426 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 2248367
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 2248366 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 2248325
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Minus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 2248217 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 2248158
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 2248157 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 2248098
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 2248097 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 2248038
Query: 792 acctc 796
|||||
Sbjct: 2248037 acctc 2248033
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Minus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 2248660 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 2248601
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 2248600 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 2248541
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 2248540 cctccgcatgggcgtccgcaacctggtggtggt 2248508
Score = 71.9 bits (36), Expect = 1e-009
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 2245126 tgcagctatcgagacgacgctgtggtcgatcgaatggggaatcgcggagctggtgaacca 2245067
Query: 1054 cccg 1057
||||
Sbjct: 2245066 cccg 2245063
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 2246298 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 2246239
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 2246238 cctctacatcgtcgagaacatcaacgttgc 2246209
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 14510378 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 14510319
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 14510318 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 14510259
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 14510258 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 14510199
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 14510198 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 14510139
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 14510138 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 14510079
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 14510078 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 14510019
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 14510018 atggacaaggtggacaccaccgagaagcccggccagttcag 14509978
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 14513886 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 14513827
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14513826 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 14513767
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 14513766 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 14513725
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Minus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 14513617 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 14513558
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 14513557 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 14513498
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 14513497 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 14513438
Query: 792 acctc 796
|||||
Sbjct: 14513437 acctc 14513433
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Minus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 14514060 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 14514001
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 14514000 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 14513941
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 14513940 cctccgcatgggcgtccgcaacctggtggtggt 14513908
Score = 71.9 bits (36), Expect = 1e-009
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 14510526 tgcagctatcgagacgacgctgtggtcgatcgaatggggaatcgcggagctggtgaacca 14510467
Query: 1054 cccg 1057
||||
Sbjct: 14510466 cccg 14510463
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 14511698 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 14511639
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 14511638 cctctacatcgtcgagaacatcaacgttgc 14511609
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 351 bits (177), Expect = 7e-094
Identities = 344/401 (85%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 14767244 tacctgcaggcggtggtgaaggagacgctgcggttgcgcatggcgatcccgctgctggtg 14767185
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
||||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 14767184 ccgcacatgaacctcgccgacggcaagctcgccggctacgacatccccgccgagtccaag 14767125
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggag 1324
||||| || ||||| |||| |||||||||| ||||| | | ||| ||| ||||| |||
Sbjct: 14767124 atcctggtgaacgcgtggttcctcgccaacgaccccaagcggtgggtgcgccccgacgag 14767065
Query: 1325 ttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttc 1384
|| |||| ||| | ||| | |||||||||||| ||| ||||| ||||||||||||||
Sbjct: 14767064 tttaggccggagaggttcctggaggaggagaaggccgtggaggcgcacggcaacgacttc 14767005
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgccc 1444
| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 14767004 cgcttcgtgcccttcggcgtcggccgccgcagctgccccgggatcatcctcgcgctgccc 14766945
Query: 1445 atcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccggg 1504
||| |||| ||||| |||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 14766944 atcatcgggatcacgctcggccgcctcgtccagagcttcgacctgctgccgccgcccggg 14766885
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||||||| ||||||||||||||| |||||||||||
Sbjct: 14766884 atggacaaggtggacaccaccgagaagcccggccagttcag 14766844
Score = 250 bits (126), Expect = 2e-063
Identities = 153/162 (94%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 14770752 ggaggtgctccacacccagggcgtcgagttcggctcccgcacccgcaacgtggtgttcga 14770693
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14770692 catcttcaccgggaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 14770633
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 14770632 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 14770591
Score = 161 bits (81), Expect = 1e-036
Identities = 159/185 (85%)
Strand = Plus / Minus
Query: 612 tgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagca 671
||||||| |||||||||||| || | | ||| |||||||||||||| || ||||| |||
Sbjct: 14770483 tgcagctgatgatgtacaacgacatgttccgcatcatgttcgaccgccgtttcgacagcg 14770424
Query: 672 tggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgc 731
||||||||||||||||| | |||| ||| |||||| ||||||||||||||| |||
Sbjct: 14770423 tggacgacccgctcttcaacaagctcaaggccttcaacgcggagcgcagccgcctctcgc 14770364
Query: 732 agagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggct 791
|||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||
Sbjct: 14770363 agagcttcgagtacaactacggtgacttcatccccgtcctccgccccttcctccgccgct 14770304
Query: 792 acctc 796
|||||
Sbjct: 14770303 acctc 14770299
Score = 89.8 bits (45), Expect = 5e-015
Identities = 126/153 (82%)
Strand = Plus / Minus
Query: 169 gctccggctgcctcccggccccgtccccgtgcccgtcttcgggaactggctgcaggtcgg 228
|||||| || || |||||||||| | || |||| || |||| |||||||| ||||||||
Sbjct: 14770926 gctccgcctcccgcccggccccgccggcgcgcccatcgtcggcaactggctccaggtcgg 14770867
Query: 229 cgacgacctcaaccaccgcaacctcgccgcgctgtcccgcaagttcggcgacgtcttcct 288
|||||||||||||||||||||||| |||||| | || |||||||||| || ||||
Sbjct: 14770866 cgacgacctcaaccaccgcaacctgatggcgctggcgcggcggttcggcgacatcctcct 14770807
Query: 289 cctccggatggggcagcgcaacctggtggtggt 321
|||||| ||||| |||||||||||||||||
Sbjct: 14770806 cctccgcatgggcgtccgcaacctggtggtggt 14770774
Score = 71.9 bits (36), Expect = 1e-009
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 14767392 tgcagctatcgagacgacgctgtggtcgatcgaatggggaatcgcggagctggtgaacca 14767333
Query: 1054 cccg 1057
||||
Sbjct: 14767332 cccg 14767329
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 14768564 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 14768505
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 14768504 cctctacatcgtcgagaacatcaacgttgc 14768475
>dbj|AP004859.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone OJ1756_B04,
*** SEQUENCING IN PROGRESS ***
Length = 122864
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 90079 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 90138
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 90139 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 90198
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 90199 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 90258
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 90259 gccgttcttcac 90270
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 73313 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 73254
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 73253 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 73194
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 73193 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 73134
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 73133 gccgttcttcac 73122
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90487 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 90546
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 90547 ccgtcccttcttgcggggctacctca 90572
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72905 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 72846
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 72845 ccgtcccttcttgcggggctacctca 72820
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 91036 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 91095
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 91096 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 91143
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 72459 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 72400
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 72399 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 72352
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 91279 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 91338
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 91339 ctgcccatcct 91349
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 72216 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 72157
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 72156 ctgcccatcct 72146
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 90853 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 90912
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 90913 atcgagtgggcgctggccgaggtcgtcaaccacccgg 90949
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 73422 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 73371
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 90386 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 90430
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 73006 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 72962
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 91207 cccgaggagttccggcctgagcggttcttggagaaggaga 91246
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 89970 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 90019
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 72288 cccgaggagttccggcctgagcggttcttggagaaggaga 72249
>dbj|AK072588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G16, full
insert sequence
Length = 1910
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 408 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 467
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 468 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 527
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 528 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 587
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 588 gccgttcttcac 599
Score = 131 bits (66), Expect = 1e-027
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 875
Query: 772 ccgtcc 777
||||||
Sbjct: 876 ccgtcc 881
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1247 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 1306
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 1307 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 1354
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 1490 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 1549
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 1550 ctgcccatcct 1560
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 1064 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 1123
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 1124 atcgagtgggcgctggccgaggtcgtcaaccacccgg 1160
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 299 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 350
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 715 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 759
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 1418 cccgaggagttccggcctgagcggttcttggagaaggaga 1457
>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1342_D02
Length = 125460
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 92956 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 93015
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 93016 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 93075
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 93076 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 93135
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 93136 gccgttcttcac 93147
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 76190 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 76131
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 76130 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 76071
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 76070 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 76011
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 76010 gccgttcttcac 75999
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93364 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 93423
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 93424 ccgtcccttcttgcggggctacctca 93449
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75782 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 75723
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 75722 ccgtcccttcttgcggggctacctca 75697
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 93913 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 93972
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 93973 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 94020
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 75233 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 75174
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 75173 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 75126
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 94156 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 94215
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 94216 ctgcccatcct 94226
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 74990 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 74931
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 74930 ctgcccatcct 74920
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 93730 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 93789
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 93790 atcgagtgggcgctggccgaggtcgtcaaccacccgg 93826
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 75416 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 75357
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 75356 atcgagtgggcgctggccgaggtcgtcaaccacccgg 75320
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 92847 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 92898
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 93263 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 93307
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 75883 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 75839
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 94084 cccgaggagttccggcctgagcggttcttggagaaggaga 94123
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 76299 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 76250
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 75062 cccgaggagttccggcctgagcggttcttggagaaggaga 75023
>gb|AACV01004242.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004242, whole
genome shotgun sequence
Length = 37707
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 27024 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 26965
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 26964 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 26905
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 26904 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 26845
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 26844 gccgttcttcac 26833
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26616 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 26557
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 26556 ccgtcccttcttgcggggctacctca 26531
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 26067 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 26008
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 26007 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 25960
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 25824 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 25765
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 25764 ctgcccatcct 25754
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 26250 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 26191
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 26190 atcgagtgggcgctggccgaggtcgtcaaccacccgg 26154
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 26717 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 26673
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 27133 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 27084
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 25896 cccgaggagttccggcctgagcggttcttggagaaggaga 25857
>ref|XM_465538.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1602
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 303 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 362
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 363 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 422
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 423 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 482
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 483 gccgttcttcac 494
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 770
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 771 ccgtcccttcttgcggggctacctca 796
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1141 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 1200
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 1201 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 1248
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 1384 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 1443
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 1444 ctgcccatcct 1454
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 958 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 1017
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 1018 atcgagtgggcgctggccgaggtcgtcaaccacccgg 1054
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 610 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 654
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 1312 cccgaggagttccggcctgagcggttcttggagaaggaga 1351
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 194 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 243
>ref|XM_465542.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1910
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 408 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 467
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 468 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 527
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 528 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 587
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 588 gccgttcttcac 599
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 875
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 876 ccgtcccttcttgcggggctacctca 901
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1246 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 1305
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 1306 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 1353
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 1489 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 1548
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 1549 ctgcccatcct 1559
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 1063 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 1122
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 1123 atcgagtgggcgctggccgaggtcgtcaaccacccgg 1159
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 299 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 350
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 715 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 759
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 1417 cccgaggagttccggcctgagcggttcttggagaaggaga 1456
>ref|NT_107179.1| Oryza sativa (japonica cultivar-group)
Length = 4877845
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 1897203 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 1897262
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 1897263 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 1897322
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 1897323 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 1897382
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 1897383 gccgttcttcac 1897394
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 1880437 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 1880378
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 1880377 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 1880318
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 1880317 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 1880258
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 1880257 gccgttcttcac 1880246
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897611 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 1897670
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 1897671 ccgtcccttcttgcggggctacctca 1897696
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1880029 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 1879970
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 1879969 ccgtcccttcttgcggggctacctca 1879944
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1898160 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 1898219
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 1898220 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 1898267
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1879480 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 1879421
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 1879420 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 1879373
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 1898403 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 1898462
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 1898463 ctgcccatcct 1898473
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 1879237 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 1879178
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 1879177 ctgcccatcct 1879167
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 1897977 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 1898036
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 1898037 atcgagtgggcgctggccgaggtcgtcaaccacccgg 1898073
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 1879663 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 1879604
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 1879603 atcgagtgggcgctggccgaggtcgtcaaccacccgg 1879567
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 1897094 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 1897145
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 1897510 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 1897554
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 1880130 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 1880086
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 1898331 cccgaggagttccggcctgagcggttcttggagaaggaga 1898370
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 1880546 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 1880497
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 1879309 cccgaggagttccggcctgagcggttcttggagaaggaga 1879270
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 2046563 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 2046504
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 2046503 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 2046444
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 2046443 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 2046384
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 2046383 gccgttcttcac 2046372
Score = 153 bits (77), Expect = 4e-034
Identities = 165/193 (85%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 2063324 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 2063383
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaa-ggggc 422
||||||||||||||||||| | |||||||| |||||||||||||||| | ||| || ||
Sbjct: 2063384 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaacgccaacggcgc 2063443
Query: 423 aggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccg 482
|||||||||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct: 2063444 ccgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgc 2063503
Query: 483 tgcccttcttcac 495
|||| ||||||||
Sbjct: 2063504 tgccgttcttcac 2063516
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046155 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 2046096
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 2046095 ccgtcccttcttgcggggctacctca 2046070
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 2045606 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 2045547
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 2045546 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 2045499
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 2045363 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 2045304
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 2045303 ctgcccatcct 2045293
Score = 73.9 bits (37), Expect = 3e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 2063629 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 2063688
Query: 1439 ctgcc 1443
|||||
Sbjct: 2063689 ctgcc 2063693
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 2045789 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 2045730
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 2045729 atcgagtgggcgctggccgaggtcgtcaaccacccgg 2045693
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 2063215 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 2063266
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 2046256 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 2046212
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 21910320 gccgccgccgtcgtcgacgacg 21910341
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 2046672 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 2046623
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 2045435 cccgaggagttccggcctgagcggttcttggagaaggaga 2045396
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 5165506 gccgccgccgtcgtcgacga 5165487
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 15499627 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 15499568
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 15499567 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 15499508
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 15499507 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 15499448
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 15499447 gccgttcttcac 15499436
Score = 153 bits (77), Expect = 4e-034
Identities = 165/193 (85%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 15516388 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 15516447
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaa-ggggc 422
||||||||||||||||||| | |||||||| |||||||||||||||| | ||| || ||
Sbjct: 15516448 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaacgccaacggcgc 15516507
Query: 423 aggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccg 482
|||||||||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct: 15516508 ccgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgc 15516567
Query: 483 tgcccttcttcac 495
|||| ||||||||
Sbjct: 15516568 tgccgttcttcac 15516580
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15499219 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 15499160
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 15499159 ccgtcccttcttgcggggctacctca 15499134
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 15498670 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 15498611
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 15498610 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 15498563
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 15498427 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 15498368
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 15498367 ctgcccatcct 15498357
Score = 73.9 bits (37), Expect = 3e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 15516693 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 15516752
Query: 1439 ctgcc 1443
|||||
Sbjct: 15516753 ctgcc 15516757
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 15498853 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 15498794
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 15498793 atcgagtgggcgctggccgaggtcgtcaaccacccgg 15498757
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 15516279 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 15516330
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 15499320 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 15499276
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 35363384 gccgccgccgtcgtcgacgacg 35363405
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 15499736 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 15499687
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 15498499 cccgaggagttccggcctgagcggttcttggagaaggaga 15498460
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 18618570 gccgccgccgtcgtcgacga 18618551
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 15835016 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 15835075
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 15835076 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 15835135
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 15835136 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 15835195
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 15835196 gccgttcttcac 15835207
Score = 159 bits (80), Expect = 6e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 15818250 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 15818191
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggca 423
||||||||||||||||||| | |||||||| ||||||||||||||||| | ||| ||
Sbjct: 15818190 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaccgccaacggcgc 15818131
Query: 424 ggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgt 483
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
Sbjct: 15818130 cgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgct 15818071
Query: 484 gcccttcttcac 495
||| ||||||||
Sbjct: 15818070 gccgttcttcac 15818059
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15835424 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 15835483
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 15835484 ccgtcccttcttgcggggctacctca 15835509
Score = 139 bits (70), Expect = 6e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 712 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15817842 cgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatccccatcct 15817783
Query: 772 ccgtccgttcctccgcggctacctca 797
|||||| ||| | || ||||||||||
Sbjct: 15817782 ccgtcccttcttgcggggctacctca 15817757
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 15835973 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 15836032
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 15836033 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 15836080
Score = 97.7 bits (49), Expect = 2e-017
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||||||||| ||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 15817293 tacctgcaggccgtgatcaaggagacgctgcggctgcactccccgatcccgctgctggtg 15817234
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
|||||||||||||| | || |||||||||||||| ||| |||||||
Sbjct: 15817233 ccgcacatgaacctggaggaggccaagctcggcgggtacaccatcccc 15817186
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 15836216 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 15836275
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 15836276 ctgcccatcct 15836286
Score = 85.8 bits (43), Expect = 7e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 15817050 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 15816991
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 15816990 ctgcccatcct 15816980
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 15835790 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 15835849
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 15835850 atcgagtgggcgctggccgaggtcgtcaaccacccgg 15835886
Score = 66.0 bits (33), Expect = 7e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 962 aacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcg 1021
|||||| ||| |||||| |||||||| ||||| || || |||||||| ||||| |||||
Sbjct: 15817476 aacgtgatctacatcgtggagaacatcaacgtggccgccatcgagacgacgctctggtcc 15817417
Query: 1022 atcgagtgggcggtcgctgagctggtgaaccacccgg 1058
|||||||||||| | || ||| | || ||||||||||
Sbjct: 15817416 atcgagtgggcgctggccgaggtcgtcaaccacccgg 15817380
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 15834907 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 15834958
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 15835323 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 15835367
Score = 50.1 bits (25), Expect = 0.004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgac 655
|||||||||||| ||||||||| | | |||||||| |||||||||
Sbjct: 15817943 ctgcagctcatgctgtacaacatcatgtaccggatgatgttcgac 15817899
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 35280073 gccgccgccgtcgtcgacgacg 35280094
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 15836144 cccgaggagttccggcctgagcggttcttggagaaggaga 15836183
Score = 44.1 bits (22), Expect = 0.26
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccac 244
||||||| || ||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 15818359 ccgtgccggtgttcggcaactggctgcacgtcgggaacgacctgaaccac 15818310
Score = 44.1 bits (22), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggaga 1355
||||||||||||||||| ||||| ||| | ||| ||||||
Sbjct: 15817122 cccgaggagttccggcctgagcggttcttggagaaggaga 15817083
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 18844745 gccgccgccgtcgtcgacga 18844726
>gb|AACV01004243.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004243, whole
genome shotgun sequence
Length = 6181
Score = 153 bits (77), Expect = 4e-034
Identities = 165/193 (85%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 304 gcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcaggg 363
|||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||
Sbjct: 5978 gcgcaacctggtggtggtgtcggacccgaagctggcgacggaggtgctgcacacgcaggg 6037
Query: 364 cgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaa-ggggc 422
||||||||||||||||||| | |||||||| |||||||||||||||| | ||| || ||
Sbjct: 6038 cgtggagttcggctcccgcccgcgcaacgtcgtcttcgacatcttcaacgccaacggcgc 6097
Query: 423 aggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccg 482
|||||||||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct: 6098 ccgacatggtgttcaccgagtacggcgaccactggcgacgcatgcgccgcgtcatgacgc 6157
Query: 483 tgcccttcttcac 495
|||| ||||||||
Sbjct: 6158 tgccgttcttcac 6170
Score = 56.0 bits (28), Expect = 7e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||||||||||||| ||| ||||||| ||||||||
Sbjct: 5869 ccgtgccggtgttcggcaactggctgcaggtgggcaacgacctgaaccaccg 5920
>gb|AACV01004244.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004244, whole
genome shotgun sequence
Length = 19713
Score = 73.9 bits (37), Expect = 3e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||||||| ||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 2 gacttcaggttcctgcccttcggcgtgggccgccgcagctgcccggggatcatcctggcg 61
Query: 1439 ctgcc 1443
|||||
Sbjct: 62 ctgcc 66
>gb|AQ576280.1|AQ576280 nbxb0088L20r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0088L20r, DNA sequence
Length = 830
Score = 69.9 bits (35), Expect = 4e-009
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 549 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 608
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 609 nctctacatcgtcgagaacatcaacgttgc 638
>gb|AQ256364.1|AQ256364 nbxb0016O01r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0016O01r, DNA sequence
Length = 607
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 87 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 146
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 147 cctctacatcgtcgagaacatcaacgttgc 176
>gb|AQ289078.1|AQ289078 nbxb0034K09r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0034K09r, DNA sequence
Length = 855
Score = 67.9 bits (34), Expect = 2e-008
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
||||||||| || ||||| || ||||| || |||||| ||||||||| | ||||||||
Sbjct: 87 gtgcgccatggaccacatcctcgaggccgagaggaagggcgagatcaaccacgacaacgt 146
Query: 967 gctcttcatcgtcgagaacattaacgttgc 996
|||| ||||||||||||||| ||||||||
Sbjct: 147 cctctacatcgtcgagaacatcaacgttgc 176
>gb|AU058037.1|AU058037 AU058037 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62026_6Z, mRNA sequence
Length = 464
Score = 62.0 bits (31), Expect = 1e-006
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccggg-atcatcctcgc 1437
|||||||||| |||| |||| ||||| |||||| | ||||| |||||| |||||||| ||
Sbjct: 50 gacttcaggttcctgnccttnggcgtgggccgccgcagctgncccggggatcatcctggc 109
Query: 1438 cctgcccatcct 1449
|||||||||||
Sbjct: 110 gctgcccatcct 121
>dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F12, full
insert sequence
Length = 1939
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 1223 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 1265
>gb|AACV01001578.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001578, whole
genome shotgun sequence
Length = 30876
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 3351 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 3309
>ref|NM_193526.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1575
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 1108 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 1150
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 4335904 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 4335862
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0496H05
Length = 147817
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 60893 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 60851
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 4250063 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 4250021
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 62.0 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 20875186 ctcccctacctgcaggcggtgctcaaggagtcgatgcggctgc 20875144
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 28657879 ggtgatcaaggagacgctccggctgc 28657904
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 32896674 acaactacggcgacttcatc 32896693
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 6407049 tgcaggcggtgatcaaggag 6407068
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3506795 acaactacggcgacttcatc 3506814
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3256928 acaactacggcgacttcatc 3256909
>emb|AL607097.1|OSJN01006 Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0082A03,
*** SEQUENCING IN PROGRESS ***
Length = 155150
Score = 54.1 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcg 1176
|||||||||||||||||| ||||||||||| ||||
Sbjct: 119755 ccctacctgcaggcggtgctcaaggagacgttgcg 119789
>dbj|AK099468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023N04, full
insert sequence
Length = 1933
Score = 54.1 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcg 1176
|||||||||||||||||| ||||||||||| ||||
Sbjct: 1121 ccctacctgcaggcggtgctcaaggagacgttgcg 1155
>dbj|AK105993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H03, full
insert sequence
Length = 1728
Score = 54.1 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcg 1176
|||||||||||||||||| ||||||||||| ||||
Sbjct: 1121 ccctacctgcaggcggtgctcaaggagacgttgcg 1155
>dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-D04, full
insert sequence
Length = 1862
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 1058 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 1100
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0681G01, complete sequence
Length = 184118
Score = 54.1 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcg 1176
|||||||||||||||||| ||||||||||| ||||
Sbjct: 57034 ccctacctgcaggcggtgctcaaggagacgttgcg 57000
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0047B10
Length = 158798
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 13480 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 13438
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1596_C06
Length = 124721
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 72925 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 72883
>gb|AACV01020124.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020124, whole
genome shotgun sequence
Length = 34569
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 16561 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 16603
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0075G19
Length = 163558
Score = 54.1 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcg 1176
|||||||||||||||||| ||||||||||| ||||
Sbjct: 28404 ccctacctgcaggcggtgctcaaggagacgttgcg 28438
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 2356589 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 2356547
Score = 42.2 bits (21), Expect = 1.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1233 tcggcggntacgacatccccgccg 1256
||||||| ||||||||||||||||
Sbjct: 1999079 tcggcggctacgacatccccgccg 1999056
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 tggtggtggtctcgtcgccgccgc 335
||||||||||||||| ||||||||
Sbjct: 1740486 tggtggtggtctcgtggccgccgc 1740509
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 54.1 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcg 1176
|||||||||||||||||| ||||||||||| ||||
Sbjct: 127085 ccctacctgcaggcggtgctcaaggagacgttgcg 127119
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 6007864 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 6007822
Score = 42.2 bits (21), Expect = 1.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1233 tcggcggntacgacatccccgccg 1256
||||||| ||||||||||||||||
Sbjct: 5619871 tcggcggctacgacatccccgccg 5619848
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 tggtggtggtctcgtcgccgccgc 335
||||||||||||||| ||||||||
Sbjct: 5361646 tggtggtggtctcgtggccgccgc 5361669
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 15481675 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 15481633
Score = 42.2 bits (21), Expect = 1.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1233 tcggcggntacgacatccccgccg 1256
||||||| ||||||||||||||||
Sbjct: 15093682 tcggcggctacgacatccccgccg 15093659
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 tggtggtggtctcgtcgccgccgc 335
||||||||||||||| ||||||||
Sbjct: 14835457 tggtggtggtctcgtggccgccgc 14835480
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
complete sequence
Length = 30731886
Score = 54.1 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcg 1176
|||||||||||||||||| ||||||||||| ||||
Sbjct: 163508 ccctacctgcaggcggtgctcaaggagacgttgcg 163542
Score = 48.1 bits (24), Expect = 0.016
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 24148917 cctcccgtacctgcaggccgtggcgaaggagacgctgcggctgc 24148874
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 530 gaggccgaggccgccgccgtcgtcg 554
|||||||||||||||||| ||||||
Sbjct: 25777335 gaggccgaggccgccgccctcgtcg 25777311
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 3895223 cgccgccgtcgtcgacgacgt 3895203
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 3883400 cgccgccgtcgtcgacgacgt 3883380
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 3845344 cgccgccgtcgtcgacgacgt 3845324
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 25703130 gcccgaggagttccggccagagcg 25703153
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 25681402 gcccgaggagttccggccggagcg 25681425
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||||||||||||||| |||||
Sbjct: 14412380 tccggctgcctcccggcctcgtcc 14412403
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 54.1 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
||||||||||| | || |||||||||||||||||||||||||
Sbjct: 16664786 ctcccctacctcaacgccgtgatcaaggagacgctgcggctgc 16664744
Score = 42.2 bits (21), Expect = 1.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1233 tcggcggntacgacatccccgccg 1256
||||||| ||||||||||||||||
Sbjct: 16307276 tcggcggctacgacatccccgccg 16307253
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 tggtggtggtctcgtcgccgccgc 335
||||||||||||||| ||||||||
Sbjct: 16048683 tggtggtggtctcgtggccgccgc 16048706
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 48.1 bits (24), Expect = 0.016
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 1614402 cctcccgtacctgcaggccgtggcgaaggagacgctgcggctgc 1614359
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 530 gaggccgaggccgccgccgtcgtcg 554
|||||||||||||||||| ||||||
Sbjct: 3242820 gaggccgaggccgccgccctcgtcg 3242796
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 3168615 gcccgaggagttccggccagagcg 3168638
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 3146887 gcccgaggagttccggccggagcg 3146910
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0417G12
Length = 163568
Score = 48.1 bits (24), Expect = 0.016
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 82375 cctcccgtacctgcaggccgtggcgaaggagacgctgcggctgc 82332
>gb|AACV01014544.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014544, whole
genome shotgun sequence
Length = 22890
Score = 48.1 bits (24), Expect = 0.016
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 4266 cctcccgtacctgcaggccgtggcgaaggagacgctgcggctgc 4309
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 48.1 bits (24), Expect = 0.016
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 5485139 cctcccgtacctgcaggccgtggcgaaggagacgctgcggctgc 5485096
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 530 gaggccgaggccgccgccgtcgtcg 554
|||||||||||||||||| ||||||
Sbjct: 7117539 gaggccgaggccgccgccctcgtcg 7117515
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 7040293 gcccgaggagttccggccagagcg 7040316
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 6998343 gcccgaggagttccggccggagcg 6998366
>gb|AU093333.1|AU093333 AU093333 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62026, mRNA sequence
Length = 342
Score = 46.1 bits (23), Expect = 0.065
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 195 ccgtgcccgtcttcgggaact-ggctgcaggtcggcgacgacctcaaccaccg 246
||||||| || ||||| |||| |||||||||| ||| ||||||| ||||||||
Sbjct: 242 ccgtgccggtnttcggcaacttggctgcaggtgggcaacgacctnaaccaccg 294
>dbj|AK072715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141G11, full
insert sequence
Length = 1678
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 825 ggtgatcaaggagacgctccggctgc 850
>dbj|AK103567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132M06, full
insert sequence
Length = 1918
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 207 tcgccggcgctggcgcgggaggtgct 232
>dbj|AK119264.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-A04, full
insert sequence
Length = 1065
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 572 ggtgatcaaggagacgctccggctgc 597
>dbj|AP005464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:B1027A11
Length = 169506
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 540 ccgccgccgtcgtcgacgacgt 561
||||||||||||||||||||||
Sbjct: 67890 ccgccgccgtcgtcgacgacgt 67911
>dbj|AB096259.1| Oryza sativa (japonica cultivar-group) PLA1 mRNA for cytochrome P450
78A11, complete cds
Length = 1668
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 1198 tacctgcaggcggtggtgaaggagacgctg 1227
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0044A10, from chromosome 10, complete sequence
Length = 169270
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 99474 tacctgcaggcggtggtgaaggagacgctg 99445
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1112_E06
Length = 95069
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 36862 tcgccggcgctggcgcgggaggtgct 36837
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0544G09
Length = 137481
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 100408 tcgccggcgctggcgcgggaggtgct 100383
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0474F11
Length = 139544
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 92123 gccgccgccgtcgtcgacgacg 92144
>gb|AACV01002167.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002167, whole
genome shotgun sequence
Length = 53266
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 48343 ggtgatcaaggagacgctccggctgc 48368
>gb|AACV01005659.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005659, whole
genome shotgun sequence
Length = 15634
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 10450 gccgccgccgtcgtcgacgacg 10471
>gb|AACV01018966.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018966, whole
genome shotgun sequence
Length = 28699
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 21762 tcgccggcgctggcgcgggaggtgct 21787
>gb|AACV01025745.1| Oryza sativa (japonica cultivar-group) Ctg025745, whole genome
shotgun sequence
Length = 15732
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 9262 tacctgcaggcggtggtgaaggagacgctg 9233
>gb|AACV01026671.1| Oryza sativa (japonica cultivar-group) Ctg026671, whole genome
shotgun sequence
Length = 11239
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 540 ccgccgccgtcgtcgacgacgt 561
||||||||||||||||||||||
Sbjct: 4541 ccgccgccgtcgtcgacgacgt 4562
>ref|NM_192202.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1530
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 1071 ggtgatcaaggagacgctccggctgc 1096
>ref|NM_196400.1| Oryza sativa (japonica cultivar-group) putative cytochrome 450
(OSJNBa0044A10.17), mRNA
Length = 1668
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 1198 tacctgcaggcggtggtgaaggagacgctg 1227
>ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1531814
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 1462018 tacctgcaggcggtggtgaaggagacgctg 1461989
>ref|XM_468445.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 588
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 266 gccgccgccgtcgtcgacgacg 245
>ref|XM_481957.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 513
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 540 ccgccgccgtcgtcgacgacgt 561
||||||||||||||||||||||
Sbjct: 421 ccgccgccgtcgtcgacgacgt 442
>ref|XM_483653.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1918
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 207 tcgccggcgctggcgcgggaggtgct 232
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
Length = 1785023
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 1115346 gccgccgccgtcgtcgacgacg 1115367
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1119_A01
Length = 108727
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacgacg 560
||||||||||||||||||||||
Sbjct: 30407 gccgccgccgtcgtcgacgacg 30428
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 27235526 tcgccggcgctggcgcgggaggtgct 27235501
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 540 ccgccgccgtcgtcgacgacgt 561
||||||||||||||||||||||
Sbjct: 16453893 ccgccgccgtcgtcgacgacgt 16453914
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 20516638 ggtgatcaacgagacgctgcggctg 20516614
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 53902 ccctacctaaaggcggtgatcaaggagac 53874
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 49309 ccctacctaaaggcggtgatcaaggagac 49281
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0454A11
Length = 152240
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 98310 ggtgatcaaggagacgctccggctgc 98335
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0047E11
Length = 148109
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 30045 ggtgatcaaggagacgctccggctgc 30070
>gb|CH401311.1| Oryza sativa (japonica cultivar-group) scaffold000150 genomic
scaffold, whole genome shotgun sequence
Length = 33448
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 9262 tacctgcaggcggtggtgaaggagacgctg 9233
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 18618677 tcgccggcgctggcgcgggaggtgct 18618652
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 11994609 ggtgatcaacgagacgctgcggctg 11994585
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||||||||||||||||| |||||||
Sbjct: 3456158 ggtgatcaaggagacgctccggctgc 3456183
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 7694953 acaactacggcgacttcatc 7694972
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 26220683 tcgccggcgctggcgcgggaggtgct 26220658
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 19596615 ggtgatcaacgagacgctgcggctg 19596591
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 292139 ccctacctaaaggcggtgatcaaggagac 292111
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 287546 ccctacctaaaggcggtgatcaaggagac 287518
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 44.1 bits (22), Expect = 0.26
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 326 tcgccgccgctggcgcgggaggtgct 351
|||||| |||||||||||||||||||
Sbjct: 27473613 tcgccggcgctggcgcgggaggtgct 27473588
Score = 44.1 bits (22), Expect = 0.26
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 540 ccgccgccgtcgtcgacgacgt 561
||||||||||||||||||||||
Sbjct: 16691980 ccgccgccgtcgtcgacgacgt 16692001
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 20754725 ggtgatcaacgagacgctgcggctg 20754701
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 287476 ccctacctaaaggcggtgatcaaggagac 287448
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 282883 ccctacctaaaggcggtgatcaaggagac 282855
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 13143955 tacctgcaggcggtggtgaaggagacgctg 13143926
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||| |||||||||||||||||
Sbjct: 15893036 tccggccgcctcccggccccgtcc 15893013
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 10147604 ccctacctccgggcagtcatcaaggagacgctccggctgc 10147565
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 44.1 bits (22), Expect = 0.26
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1145 tacctgcaggcggtgatcaaggagacgctg 1174
||||||||||||||| | ||||||||||||
Sbjct: 13151295 tacctgcaggcggtggtgaaggagacgctg 13151266
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||| |||||||||||||||||
Sbjct: 15901277 tccggccgcctcccggccccgtcc 15901254
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 10153643 ccctacctccgggcagtcatcaaggagacgctccggctgc 10153604
>dbj|AP004142.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1567_B05,
*** SEQUENCING IN PROGRESS ***
Length = 97656
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 65059 ggtgatcaacgagacgctgcggctg 65035
>dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E07, full
insert sequence
Length = 1865
Score = 42.2 bits (21), Expect = 1.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1233 tcggcggntacgacatccccgccg 1256
||||||| ||||||||||||||||
Sbjct: 1262 tcggcggctacgacatccccgccg 1285
>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0479C08
Length = 152460
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 127178 ggtgatcaacgagacgctgcggctg 127154
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1300_E01
Length = 103022
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 53902 ccctacctaaaggcggtgatcaaggagac 53874
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 49309 ccctacctaaaggcggtgatcaaggagac 49281
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1344_B01
Length = 170912
Score = 42.2 bits (21), Expect = 1.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1233 tcggcggntacgacatccccgccg 1256
||||||| ||||||||||||||||
Sbjct: 123792 tcggcggctacgacatccccgccg 123769
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0416A11
Length = 171519
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 530 gaggccgaggccgccgccgtcgtcg 554
|||||||||||||||||| ||||||
Sbjct: 59539 gaggccgaggccgccgccctcgtcg 59515
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0015E04
Length = 152046
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 141354 cgccgccgtcgtcgacgacgt 141334
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 103298 cgccgccgtcgtcgacgacgt 103278
>gb|AACV01014662.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014662, whole
genome shotgun sequence
Length = 16169
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 530 gaggccgaggccgccgccgtcgtcg 554
|||||||||||||||||| ||||||
Sbjct: 10944 gaggccgaggccgccgccctcgtcg 10920
>gb|AACV01017031.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg017031, whole
genome shotgun sequence
Length = 12438
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||| |||||||||||||||||
Sbjct: 1116 ggtgatccaggagacgctgcggctg 1092
>gb|AACV01017100.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017100, whole
genome shotgun sequence
Length = 26249
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 22191 ccctacctaaaggcggtgatcaaggagac 22163
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 17598 ccctacctaaaggcggtgatcaaggagac 17570
>gb|AACV01018515.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018515, whole
genome shotgun sequence
Length = 9847
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 5293 ggtgatcaacgagacgctgcggctg 5317
>gb|AACV01020088.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020088, whole
genome shotgun sequence
Length = 17961
Score = 42.2 bits (21), Expect = 1.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1233 tcggcggntacgacatccccgccg 1256
||||||| ||||||||||||||||
Sbjct: 12240 tcggcggctacgacatccccgccg 12263
>ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1581
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||| |||||||||||||||||
Sbjct: 1140 ggtgatccaggagacgctgcggctg 1164
>ref|XM_479689.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1605
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 1153 ccctacctaaaggcggtgatcaaggagac 1181
>ref|XM_482511.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1605
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||||| |||||||||||||||
Sbjct: 1173 ggtgatcaacgagacgctgcggctg 1197
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0035I03
Length = 153749
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 1099 cgccgccgtcgtcgacgacgt 1079
>ref|NM_185689.1| Oryza sativa (japonica cultivar-group), Ozsa8040 predicted mRNA
Length = 1137
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 217 cgccgccgtcgtcgacgacgt 197
>ref|NM_185699.1| Oryza sativa (japonica cultivar-group), Ozsa8050 predicted mRNA
Length = 1137
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 217 cgccgccgtcgtcgacgacgt 197
>ref|NT_079872.2| Oryza sativa (japonica cultivar-group)
Length = 1124013
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 971431 cgccgccgtcgtcgacgacgt 971411
Score = 42.2 bits (21), Expect = 1.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacgacgt 561
|||||||||||||||||||||
Sbjct: 933375 cgccgccgtcgtcgacgacgt 933355
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0008J01
Length = 159900
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||| |||||||||||||||||
Sbjct: 90005 ggtgatccaggagacgctgcggctg 90029
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||| |||||||||||||||||
Sbjct: 16445324 ggtgatccaggagacgctgcggctg 16445348
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065
genomic scaffold, whole genome shotgun sequence
Length = 5026603
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 292139 ccctacctaaaggcggtgatcaaggagac 292111
Score = 42.2 bits (21), Expect = 1.0
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagac 1170
|||||||| |||||||||||||||||||
Sbjct: 287546 ccctacctaaaggcggtgatcaaggagac 287518
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||| |||||||||||||||||
Sbjct: 14429261 ggtgatccaggagacgctgcggctg 14429285
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||| |||||||||||||||||
Sbjct: 27828700 ggtgatccaggagacgctgcggctg 27828724
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 4328861 gccgaggccgccgccgccgacgacgacg 4328834
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 42.2 bits (21), Expect = 1.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctg 1180
||||||| |||||||||||||||||
Sbjct: 28832319 ggtgatccaggagacgctgcggctg 28832343
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 4434006 gccgaggccgccgccgccgacgacgacg 4433979
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 1440459 ggccgccgccgccgtcgacgacgt 1440482
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 1407303 ggccgccgccgccgtcgacgacgt 1407326
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 1340999 ggccgccgccgccgtcgacgacgt 1341022
>gb|AQ328148.1|AQ328148 nbxb0042D19f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0042D19f, DNA sequence
Length = 762
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 393 gcccgaggagttccggccggagcg 370
>gb|AQ862180.1|AQ862180 nbeb0018K08f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0018K08f, DNA sequence
Length = 778
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 309 tgcaggcggtgatcaaggag 290
>gb|AZ126077.1|AZ126077 OSJNBb0072F16r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0072F16r, DNA
sequence
Length = 430
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 541 cgccgccgtcgtcgacgacg 560
||||||||||||||||||||
Sbjct: 333 cgccgccgtcgtcgacgacg 352
>gb|C73224.1|C73224 C73224 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3438_1A, mRNA sequence
Length = 341
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 114 acaactacggcgacttcatc 133
>gb|AU070205.1|AU070205 AU070205 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3657_1A, mRNA sequence
Length = 326
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 266 gccgccgccgtcgtcgacga 285
>gb|CB654836.1|CB654836 OSJNEc07K13.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07K13 5', mRNA sequence
Length = 702
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 567 gccgccgccgtcgtcgacga 586
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0028E10
Length = 140791
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 31253 acaactacggcgacttcatc 31272
>dbj|AP005975.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone
OSJNBa0060M02, *** SEQUENCING IN PROGRESS ***
Length = 109894
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 61897 ggccgccgccgccgtcgacgacgt 61920
>dbj|AK068281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J12, full
insert sequence
Length = 1512
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 724 gccgccgccgtcgtcgacga 743
>dbj|AK103707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136O07, full
insert sequence
Length = 1217
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 133 acaactacggcgacttcatc 152
>dbj|AK110189.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-A04, full
insert sequence
Length = 3387
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 555 acgacgtgcgcctcgaccccaagg 578
||||||||||| ||||||||||||
Sbjct: 2310 acgacgtgcgcttcgaccccaagg 2333
>dbj|AK120073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013006P20, full
insert sequence
Length = 1270
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 275 acaactacggcgacttcatc 294
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
Nipponbare clone OSJNBb0023M11, from chromosome 10,
complete sequence
Length = 138668
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 67825 ccctacctccgggcagtcatcaaggagacgctccggctgc 67786
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06,
complete sequence
Length = 174019
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||| |||||||||||||||||
Sbjct: 64560 tccggccgcctcccggccccgtcc 64537
>emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0045P24,
complete sequence
Length = 124420
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 50719 ggccgccgccgccgtcgacgacgt 50696
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0461D06
Length = 112895
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 8278 gccgccgccgtcgtcgacga 8259
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:B1249D05
Length = 132526
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 26048 ggccgccgccgccgtcgacgacgt 26071
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1212_C12
Length = 147782
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 80644 ggccgccgccgccgtcgacgacgt 80667
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 47488 ggccgccgccgccgtcgacgacgt 47511
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1506_G02
Length = 106742
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 73855 gccgaggccgccgccgccgacgacgacg 73828
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0474G09
Length = 169511
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 105834 ggccgccgccgccgtcgacgacgt 105857
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
sequence
Length = 139771
Score = 40.2 bits (20), Expect = 4.0
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1144 ctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||||| ||||||||||||||| || |||||
Sbjct: 30260 ctacctgcagctggtgatcaaggagaccctacggct 30225
>ref|NT_079876.2| Oryza sativa (japonica cultivar-group)
Length = 1376782
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||||||||||||||| |||||
Sbjct: 522783 tccggctgcctcccggcctcgtcc 522806
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1328_D07
Length = 155007
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 tggtggtggtctcgtcgccgccgc 335
||||||||||||||| ||||||||
Sbjct: 48896 tggtggtggtctcgtggccgccgc 48919
>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0526E12
Length = 150872
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||||||||||||||| |||||
Sbjct: 140255 tccggctgcctcccggcctcgtcc 140278
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0021M10
Length = 163416
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||||||||||||||| |||||
Sbjct: 5554 tccggctgcctcccggcctcgtcc 5577
>dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
fosmid clone:OSJNOa257A21
Length = 34833
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 28987 gccgccgccgtcgtcgacga 28968
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0458E02
Length = 154458
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 126575 gcccgaggagttccggccagagcg 126598
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 104847 gcccgaggagttccggccggagcg 104870
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1070A12
Length = 148449
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 23703 acaactacggcgacttcatc 23722
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0041E11
Length = 146335
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 132987 acaactacggcgacttcatc 132968
>gb|AACV01000243.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000243, whole
genome shotgun sequence
Length = 49008
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 34474 acaactacggcgacttcatc 34455
>gb|AACV01000254.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000254, whole
genome shotgun sequence
Length = 92445
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 51254 acaactacggcgacttcatc 51273
>gb|AACV01000448.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000448, whole
genome shotgun sequence
Length = 60034
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 30229 tgcaggcggtgatcaaggag 30210
>gb|AACV01002465.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002465,
whole genome shotgun sequence
Length = 57069
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 157 acaactacggcgacttcatc 176
>gb|AACV01004491.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004491, whole
genome shotgun sequence
Length = 6304
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 3476 gccgccgccgtcgtcgacga 3495
>gb|AACV01013890.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013890, whole
genome shotgun sequence
Length = 17106
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||||||||||||||| |||||
Sbjct: 14639 tccggctgcctcccggcctcgtcc 14616
>gb|AACV01014651.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014651, whole
genome shotgun sequence
Length = 21610
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 20512 gcccgaggagttccggccggagcg 20535
>gb|AACV01014656.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014656, whole
genome shotgun sequence
Length = 19030
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 8652 gcccgaggagttccggccagagcg 8629
>gb|AACV01015296.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015296, whole
genome shotgun sequence
Length = 46349
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 11474 gccgaggccgccgccgccgacgacgacg 11501
>gb|AACV01020062.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020062, whole
genome shotgun sequence
Length = 1781
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 312 tggtggtggtctcgtcgccgccgc 335
||||||||||||||| ||||||||
Sbjct: 1683 tggtggtggtctcgtggccgccgc 1660
>gb|AACV01021311.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021311, whole
genome shotgun sequence
Length = 53141
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 17772 ccctacctccgggcagtcatcaaggagacgctccggctgc 17733
>gb|AACV01021691.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021691, whole
genome shotgun sequence
Length = 5302
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||| |||||||||||||||||
Sbjct: 1408 tccggccgcctcccggccccgtcc 1385
>gb|AACV01031567.1| Oryza sativa (japonica cultivar-group) Ctg031567, whole genome
shotgun sequence
Length = 3044
Score = 40.2 bits (20), Expect = 4.0
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1144 ctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||||| ||||||||||||||| || |||||
Sbjct: 1752 ctacctgcagctggtgatcaaggagaccctacggct 1787
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0701D05
Length = 172161
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 122863 acaactacggcgacttcatc 122882
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1276_B06
Length = 175174
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 12561 acaactacggcgacttcatc 12580
>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1189A09
Length = 167761
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 6828 acaactacggcgacttcatc 6809
>ref|NM_195945.1| Oryza sativa (japonica cultivar-group) putative Cytochrome P450
(OSJNBb0023M11.14), mRNA
Length = 1557
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 1087 ccctacctccgggcagtcatcaaggagacgctccggctgc 1126
>ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 2206062
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 781088 ccctacctccgggcagtcatcaaggagacgctccggctgc 781049
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||| |||||||||||||||||
Sbjct: 2624667 tccggccgcctcccggccccgtcc 2624644
>ref|XM_465978.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1512
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 724 gccgccgccgtcgtcgacga 743
>ref|XM_476462.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 738
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 439 ggccgccgccgccgtcgacgacgt 416
>ref|XM_476478.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 948
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 618 ggccgccgccgccgtcgacgacgt 595
>ref|XM_476885.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2259
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 1152 gccgaggccgccgccgccgacgacgacg 1179
>ref|NT_107174.1| Oryza sativa (japonica cultivar-group)
Length = 4376475
Score = 40.2 bits (20), Expect = 4.0
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1144 ctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||||| ||||||||||||||| || |||||
Sbjct: 2445660 ctacctgcagctggtgatcaaggagaccctacggct 2445695
>ref|NT_107204.1| Oryza sativa (japonica cultivar-group)
Length = 592222
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 322884 ggccgccgccgccgtcgacgacgt 322861
>ref|NM_184481.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1217
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 133 acaactacggcgacttcatc 152
>ref|NM_184524.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1270
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 275 acaactacggcgacttcatc 294
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 6339774 tgcaggcggtgatcaaggag 6339793
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3442295 acaactacggcgacttcatc 3442314
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3187001 acaactacggcgacttcatc 3186982
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0515G01
Length = 175072
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 113218 tgcaggcggtgatcaaggag 113237
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1046_F10
Length = 118472
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 12725 gccgaggccgccgccgccgacgacgacg 12698
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 4390078 gccgaggccgccgccgccgacgacgacg 4390051
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 1401240 ggccgccgccgccgtcgacgacgt 1401263
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 1334936 ggccgccgccgccgtcgacgacgt 1334959
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 539 gccgccgccgtcgtcgacga 558
||||||||||||||||||||
Sbjct: 28987 gccgccgccgtcgtcgacga 28968
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||| |||||||||||||||||
Sbjct: 3826035 tccggccgcctcccggccccgtcc 3826012
>gb|CH401253.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000090 genomic
scaffold, whole genome shotgun sequence
Length = 2475376
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 1087341 ccctacctccgggcagtcatcaaggagacgctccggctgc 1087302
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057 genomic
scaffold, whole genome shotgun sequence
Length = 3236776
Score = 40.2 bits (20), Expect = 4.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 533 gccgaggccgccgccgtcgtcgacgacg 560
|||||||||||||||| || ||||||||
Sbjct: 1512112 gccgaggccgccgccgccgacgacgacg 1512085
>gb|CH401212.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000049 genomic
scaffold, whole genome shotgun sequence
Length = 3314418
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||||||||||||||| |||||
Sbjct: 2814001 tccggctgcctcccggcctcgtcc 2814024
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1149 tgcaggcggtgatcaaggag 1168
||||||||||||||||||||
Sbjct: 6407049 tgcaggcggtgatcaaggag 6407068
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3506795 acaactacggcgacttcatc 3506814
Score = 40.2 bits (20), Expect = 4.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 744 acaactacggcgacttcatc 763
||||||||||||||||||||
Sbjct: 3256928 acaactacggcgacttcatc 3256909
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 171 tccggctgcctcccggccccgtcc 194
|||||| |||||||||||||||||
Sbjct: 14691829 tccggccgcctcccggccccgtcc 14691806
Score = 40.2 bits (20), Expect = 4.0
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgc 1181
|||||||| | ||| || |||||||||||||| |||||||
Sbjct: 9477659 ccctacctccgggcagtcatcaaggagacgctccggctgc 9477620
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 40.2 bits (20), Expect = 4.0
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1144 ctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||||| ||||||||||||||| || |||||
Sbjct: 21850585 ctacctgcagctggtgatcaaggagaccctacggct 21850620
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 40.2 bits (20), Expect = 4.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 538 ggccgccgccgtcgtcgacgacgt 561
||||||||||| ||||||||||||
Sbjct: 8117187 ggccgccgccgccgtcgacgacgt 8117164
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 40.2 bits (20), Expect = 4.0
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1144 ctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||||| ||||||||||||||| || |||||
Sbjct: 21857556 ctacctgcagctggtgatcaaggagaccctacggct 21857591
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,024,594
Number of Sequences: 438736
Number of extensions: 3024594
Number of successful extensions: 36428
Number of sequences better than 10.0: 188
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 30352
Number of HSP's gapped (non-prelim): 6015
length of query: 1794
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1772
effective length of database: 2,790,767,724
effective search space: 4945240406928
effective search space used: 4945240406928
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 20 (40.2 bits)