BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 9009927.2.1
(404 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF474136.1| Oryza sativa typical P-type R2R3 Myb protein... 230 5e-058
gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 ... 230 5e-058
ref|XM_470731.1| Oryza sativa (japonica cultivar-group), mRNA 230 5e-058
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 230 5e-058
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 230 5e-058
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 230 5e-058
ref|XM_482584.1| Oryza sativa (japonica cultivar-group), mRNA 222 1e-055
gb|AACV01006741.1| Oryza sativa (japonica cultivar-group) c... 214 3e-053
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 214 3e-053
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 214 3e-053
gb|CB658779.1|CB658779 OSJNEc15B08.f OSJNEc Oryza sativa (j... 202 1e-049
dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA... 194 3e-047
emb|Y11352.1|OSMYB1308 O.sativa mRNA for myb factor, 1308 bp 194 3e-047
gb|AC123525.2| Oryza sativa (japonica cultivar-group) chrom... 172 9e-041
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 172 9e-041
gb|AACV01022281.1| Oryza sativa (japonica cultivar-group) c... 172 9e-041
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 172 9e-041
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 172 9e-041
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 172 9e-041
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 172 9e-041
dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA... 165 2e-038
emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC O... 165 2e-038
gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone... 165 2e-038
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 165 2e-038
gb|AACV01023895.1| Oryza sativa (japonica cultivar-group) c... 165 2e-038
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 165 2e-038
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 165 2e-038
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 165 2e-038
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 165 2e-038
dbj|AK110844.1| Oryza sativa (japonica cultivar-group) cDNA... 149 1e-033
gb|CB656158.1|CB656158 OSJNEc10C21.f OSJNEc Oryza sativa (j... 137 5e-030
gb|AACV01010414.1| Oryza sativa (japonica cultivar-group) c... 113 7e-023
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 113 7e-023
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 113 7e-023
emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromoso... 113 7e-023
emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromoso... 113 7e-023
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 113 7e-023
gb|CB669882.1|CB669882 OSJNEe02K23.r OSJNEe Oryza sativa (j... 111 3e-022
gb|CV152463.1|CV152463 LS331-S.SEQ Cold stressed rice cDNA ... 111 3e-022
dbj|AK072361.1| Oryza sativa (japonica cultivar-group) cDNA... 111 3e-022
ref|XM_472292.1| Oryza sativa (japonica cultivar-group), p... 111 3e-022
gb|CA753778.1|CA753778 BR040002000_PLATE_B03_18_027.ab1 OA ... 105 2e-020
gb|CB676187.1|CB676187 OSJNEe12E23.f OSJNEe Oryza sativa (j... 103 7e-020
dbj|AK066025.1| Oryza sativa (japonica cultivar-group) cDNA... 103 7e-020
gb|AF474137.1| Oryza sativa typical P-type R2R3 Myb protein... 101 3e-019
dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chro... 101 3e-019
dbj|AP005636.2| Oryza sativa (japonica cultivar-group) geno... 101 3e-019
gb|AACV01019979.1| Oryza sativa (japonica cultivar-group) c... 101 3e-019
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 101 3e-019
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 101 3e-019
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 101 3e-019
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 101 3e-019
gb|CB639367.1|CB639367 OSJNEa10D24.f OSJNEa Oryza sativa (j... 100 1e-018
gb|CB649345.1|CB649345 OSJNEb13D15.f OSJNEb Oryza sativa (j... 100 1e-018
dbj|AP004567.1| Oryza sativa (japonica cultivar-group) chro... 100 1e-018
dbj|AK101674.1| Oryza sativa (japonica cultivar-group) cDNA... 100 1e-018
gb|AY323480.1| Oryza sativa (japonica cultivar-group) putat... 100 1e-018
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 100 1e-018
gb|AACV01016837.1| Oryza sativa (japonica cultivar-group) c... 100 1e-018
ref|XM_479227.1| Oryza sativa (japonica cultivar-group), mRNA 100 1e-018
dbj|AP004260.2| Oryza sativa (japonica cultivar-group) geno... 100 1e-018
dbj|AP004306.3| Oryza sativa (japonica cultivar-group) geno... 100 1e-018
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 100 1e-018
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 100 1e-018
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 100 1e-018
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 100 1e-018
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 100 1e-018
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 100 1e-018
gb|CB653197.1|CB653197 OSJNEc04A04.f OSJNEc Oryza sativa (j... 98 4e-018
gb|AF474138.1| Oryza sativa typical P-type R2R3 Myb protein... 98 4e-018
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 98 4e-018
dbj|AK112056.1| Oryza sativa (japonica cultivar-group) cDNA... 98 4e-018
gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone... 98 4e-018
dbj|AP003912.3| Oryza sativa (japonica cultivar-group) geno... 98 4e-018
gb|AC136956.4| Oryza sativa (japonica cultivar-group) chrom... 98 4e-018
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 98 4e-018
ref|NT_107095.1| Oryza sativa (japonica cultivar-group) chr... 98 4e-018
gb|AACV01000388.1| Oryza sativa (japonica cultivar-group) c... 98 4e-018
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 98 4e-018
gb|AACV01023384.1| Oryza sativa (japonica cultivar-group) c... 98 4e-018
ref|XM_466825.1| Oryza sativa (japonica cultivar-group), mRNA 98 4e-018
ref|XM_483665.1| Oryza sativa (japonica cultivar-group), mRNA 98 4e-018
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 98 4e-018
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 98 4e-018
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 98 4e-018
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 98 4e-018
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 98 4e-018
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 98 4e-018
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 98 4e-018
gb|C73695.1|C73695 C73695 Rice panicle (longer than 10cm) O... 88 4e-015
gb|AU183276.1|AU183276 AU183276 Rice cDNA from immature lea... 88 4e-015
dbj|AP003922.2| Oryza sativa (japonica cultivar-group) geno... 88 4e-015
dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA... 88 4e-015
emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC O... 88 4e-015
emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC O... 88 4e-015
gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone... 88 4e-015
ref|NT_107154.1| Oryza sativa (japonica cultivar-group) 88 4e-015
gb|AACV01002776.1| Oryza sativa (japonica cultivar-group) c... 88 4e-015
gb|AACV01013228.1| Oryza sativa (japonica cultivar-group) c... 88 4e-015
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 88 4e-015
ref|NM_190827.1| Oryza sativa (japonica cultivar-group), p... 88 4e-015
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 88 4e-015
dbj|AP004669.3| Oryza sativa (japonica cultivar-group) geno... 88 4e-015
dbj|AP003297.3| Oryza sativa (japonica cultivar-group) geno... 88 4e-015
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 88 4e-015
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 88 4e-015
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 88 4e-015
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 88 4e-015
gb|AU070855.2|AU070855 AU070855 Rice cDNA from young root O... 86 2e-014
dbj|AK063456.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-014
dbj|AK066834.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-014
dbj|AK099108.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-014
dbj|AK104053.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-014
gb|AACV01012232.1| Oryza sativa (japonica cultivar-group) c... 86 2e-014
ref|XM_475269.1| Oryza sativa (japonica cultivar-group), p... 86 2e-014
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 86 2e-014
gb|AC130600.3| Oryza sativa (japonica cultivar-group) chrom... 86 2e-014
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 86 2e-014
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 86 2e-014
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 86 2e-014
dbj|AK108709.1| Oryza sativa (japonica cultivar-group) cDNA... 84 7e-014
dbj|AP005319.3| Oryza sativa (japonica cultivar-group) geno... 84 7e-014
gb|AACV01005346.1| Oryza sativa (japonica cultivar-group) c... 84 7e-014
ref|XM_467636.1| Oryza sativa (japonica cultivar-group), mRNA 84 7e-014
gb|AU082155.1|AU082155 AU082155 Rice root Oryza sativa (jap... 82 3e-013
gb|AU082180.1|AU082180 AU082180 Rice shoot Oryza sativa (ja... 82 3e-013
gb|CA756492.1|CA756492 BR030043000_PLATE_G05_39_038.ab1 OA ... 78 4e-012
emb|AL513006.1|CNS07EFL Oryza sativa (japonica cultivar-gro... 78 4e-012
gb|AF474134.1| Oryza sativa typical P-type R2R3 Myb protein... 78 4e-012
dbj|AK063027.1| Oryza sativa (japonica cultivar-group) cDNA... 78 4e-012
emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC O... 78 4e-012
gb|AY459342.1| Oryza sativa (japonica cultivar-group) clone... 78 4e-012
dbj|AP004057.3| Oryza sativa (japonica cultivar-group) geno... 78 4e-012
ref|NT_107157.1| Oryza sativa (japonica cultivar-group) 78 4e-012
gb|AACV01005549.1| Oryza sativa (japonica cultivar-group) c... 78 4e-012
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 78 4e-012
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 78 4e-012
ref|XM_468166.1| Oryza sativa (japonica cultivar-group), mRNA 78 4e-012
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 78 4e-012
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 78 4e-012
emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC O... 76 2e-011
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 76 2e-011
gb|AACV01006165.1| Oryza sativa (japonica cultivar-group) c... 76 2e-011
gb|AACV01018553.1| Oryza sativa (japonica cultivar-group) c... 76 2e-011
gb|AACV01025049.1| Oryza sativa (japonica cultivar-group) c... 76 2e-011
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|C28158.1|C28158 C28158 Rice callus cDNA Oryza sativa (ja... 74 6e-011
gb|CB676151.1|CB676151 OSJNEe12E03.f OSJNEe Oryza sativa (j... 74 6e-011
gb|AF474140.1| Oryza sativa typical P-type R2R3 Myb protein... 74 6e-011
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 74 6e-011
dbj|AK106039.1| Oryza sativa (japonica cultivar-group) cDNA... 74 6e-011
dbj|AK108259.1| Oryza sativa (japonica cultivar-group) cDNA... 74 6e-011
dbj|AK111740.1| Oryza sativa (japonica cultivar-group) cDNA... 74 6e-011
dbj|AK121023.1| Oryza sativa (japonica cultivar-group) cDNA... 74 6e-011
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 74 6e-011
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 74 6e-011
gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone... 74 6e-011
gb|AACV01002155.1| Oryza sativa (japonica cultivar-group) c... 74 6e-011
gb|AACV01018505.1| Oryza sativa (japonica cultivar-group) c... 74 6e-011
gb|AACV01020446.1| Oryza sativa (japonica cultivar-group) c... 74 6e-011
ref|XM_463409.1| Oryza sativa (japonica cultivar-group), p... 74 6e-011
ref|XM_482497.1| Oryza sativa (japonica cultivar-group), mRNA 74 6e-011
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 74 6e-011
dbj|AP005092.3| Oryza sativa (japonica cultivar-group) geno... 74 6e-011
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 74 6e-011
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 74 6e-011
emb|AL607104.1|OSJN01012 Oryza sativa (japonica cultivar-gr... 72 3e-010
gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 ... 72 3e-010
gb|AACV01007164.1| Oryza sativa (japonica cultivar-group) c... 72 3e-010
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 72 3e-010
emb|X96750.1|OSMYB71 O.sativa myb7 gene, clone myb71 68 4e-009
dbj|AP004788.1| Oryza sativa (japonica cultivar-group) chro... 68 4e-009
dbj|AP002912.2| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
dbj|AK108621.1| Oryza sativa (japonica cultivar-group) cDNA... 68 4e-009
dbj|AK111697.1| Oryza sativa (japonica cultivar-group) cDNA... 68 4e-009
dbj|AK111720.1| Oryza sativa (japonica cultivar-group) cDNA... 68 4e-009
dbj|AK111933.1| Oryza sativa (japonica cultivar-group) cDNA... 68 4e-009
gb|AY459337.1| Oryza sativa (japonica cultivar-group) clone... 68 4e-009
gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone... 68 4e-009
dbj|AP004133.3| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 68 4e-009
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
gb|AACV01000257.1| Oryza sativa (japonica cultivar-group) c... 68 4e-009
gb|AACV01000813.1| Oryza sativa (japonica cultivar-group) c... 68 4e-009
gb|AACV01005009.1| Oryza sativa (japonica cultivar-group) c... 68 4e-009
gb|AACV01005216.1| Oryza sativa (japonica cultivar-group) c... 68 4e-009
gb|AACV01014797.1| Oryza sativa (japonica cultivar-group) c... 68 4e-009
dbj|AP003339.4| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
ref|NM_183669.1| Oryza sativa (japonica cultivar-group), p... 68 4e-009
ref|XM_466994.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-009
ref|XM_467269.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-009
ref|XM_506902.1| PREDICTED Oryza sativa (japonica cultivar-... 68 4e-009
dbj|AP004786.3| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
dbj|AP005859.3| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
ref|XM_462805.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-009
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 68 4e-009
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 68 4e-009
dbj|AP003140.2| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
dbj|AP002883.2| Oryza sativa (japonica cultivar-group) geno... 68 4e-009
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 68 4e-009
gb|C73657.1|C73657 C73657 Rice panicle (longer than 10cm) O... 66 2e-008
gb|AU082322.1|AU082322 AU082322 Rice panicle (longer than 1... 66 2e-008
gb|AU082325.1|AU082325 AU082325 Rice panicle (longer than 1... 66 2e-008
gb|AU173093.1|AU173093 AU173093 Rice root Oryza sativa (jap... 66 2e-008
gb|AU184006.1|AU184006 AU184006 Rice root Oryza sativa (jap... 66 2e-008
dbj|AK104408.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
dbj|AK104457.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
dbj|AK111966.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 ... 66 2e-008
dbj|AP006174.3| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|AACV01006769.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
gb|AACV01020458.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
ref|XM_470783.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-008
gb|AU081563.1|AU081563 AU081563 Rice panicle shorter than 3... 64 6e-008
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 64 6e-008
dbj|AK064679.1| Oryza sativa (japonica cultivar-group) cDNA... 64 6e-008
dbj|AK069869.1| Oryza sativa (japonica cultivar-group) cDNA... 64 6e-008
dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA... 64 6e-008
dbj|AK108452.1| Oryza sativa (japonica cultivar-group) cDNA... 64 6e-008
dbj|AP006265.2| Oryza sativa (japonica cultivar-group) geno... 64 6e-008
dbj|AP004704.3| Oryza sativa (japonica cultivar-group) geno... 64 6e-008
gb|AC093956.2| Oryza sativa (japonica cultivar-group) chrom... 64 6e-008
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 64 6e-008
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 64 6e-008
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 64 6e-008
dbj|AP005527.3| Oryza sativa (japonica cultivar-group) geno... 64 6e-008
dbj|AP005619.3| Oryza sativa (japonica cultivar-group) geno... 64 6e-008
gb|AACV01012680.1| Oryza sativa (japonica cultivar-group) c... 64 6e-008
gb|AACV01013461.1| Oryza sativa (japonica cultivar-group) c... 64 6e-008
gb|AACV01018966.1| Oryza sativa (japonica cultivar-group) c... 64 6e-008
gb|AACV01019923.1| Oryza sativa (japonica cultivar-group) c... 64 6e-008
ref|XM_475870.1| Oryza sativa (japonica cultivar-group), p... 64 6e-008
ref|XM_483654.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-008
ref|XM_483655.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-008
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 64 6e-008
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 64 6e-008
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 64 6e-008
ref|XM_507321.1| PREDICTED Oryza sativa (japonica cultivar-... 64 6e-008
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 64 6e-008
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 64 6e-008
emb|Y11351.1|OSMYB1402 O.sativa mRNA for myb factor, 1402 bp 64 6e-008
gb|CV728451.1|CV728451 COLD--01-H09.b1 Cold treated rice le... 62 2e-007
dbj|AP003849.2| Oryza sativa (japonica cultivar-group) geno... 62 2e-007
dbj|AP005465.5| Oryza sativa (japonica cultivar-group) geno... 62 2e-007
gb|AACV01002252.1| Oryza sativa (japonica cultivar-group) c... 62 2e-007
gb|AACV01016207.1| Oryza sativa (japonica cultivar-group) c... 62 2e-007
gb|AACV01024071.1| Oryza sativa (japonica cultivar-group) c... 62 2e-007
ref|NM_191815.1| Oryza sativa (japonica cultivar-group), p... 62 2e-007
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 62 2e-007
dbj|AP003292.2| Oryza sativa (japonica cultivar-group) geno... 62 2e-007
dbj|AP003229.3| Oryza sativa (japonica cultivar-group) geno... 62 2e-007
emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromoso... 62 2e-007
gb|C98620.1|C98620 C98620 Rice panicle at flowering stage O... 60 1e-006
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|AACV01005439.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
gb|AACV01018749.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
ref|XM_467854.1| Oryza sativa (japonica cultivar-group), mRNA 60 1e-006
ref|XM_472754.1| Oryza sativa (japonica cultivar-group), p... 60 1e-006
ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA 60 1e-006
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 60 1e-006
dbj|AP004376.3| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 60 1e-006
gb|AQ579141.1|AQ579141 nbxb0096I15f CUGI Rice BAC Library O... 58 4e-006
gb|CB679300.1|CB679300 OSJNEf02K08.f OSJNEf Oryza sativa (j... 58 4e-006
gb|AC118288.2| Oryza sativa (japonica cultivar-group) chrom... 58 4e-006
dbj|AP004727.2| Oryza sativa (japonica cultivar-group) geno... 58 4e-006
dbj|AP003488.3| Oryza sativa (japonica cultivar-group) geno... 58 4e-006
gb|AACV01010825.1| Oryza sativa (japonica cultivar-group) c... 58 4e-006
gb|AACV01013318.1| Oryza sativa (japonica cultivar-group) c... 58 4e-006
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 58 4e-006
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 58 4e-006
gb|AQ842943.1|AQ842943 nbxb0001G19r CUGI Rice BAC Library O... 56 1e-005
gb|BP184885.1|BP184885 BP184885 pNS rice callus cDNA Oryza ... 56 1e-005
dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA... 56 1e-005
gb|AC134230.2| Oryza sativa (japonica cultivar-group) chrom... 56 1e-005
gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbar... 56 1e-005
dbj|AP005686.3| Oryza sativa (japonica cultivar-group) geno... 56 1e-005
dbj|AP005747.3| Oryza sativa (japonica cultivar-group) geno... 56 1e-005
gb|AC118285.2| Oryza sativa (japonica cultivar-group) chrom... 56 1e-005
gb|AC098833.2| Oryza sativa (japonica cultivar-group) chrom... 56 1e-005
gb|AACV01006480.1| Oryza sativa (japonica cultivar-group) c... 56 1e-005
gb|AACV01009638.1| Oryza sativa (japonica cultivar-group) c... 56 1e-005
gb|AACV01010181.1| Oryza sativa (japonica cultivar-group) c... 56 1e-005
gb|AACV01012646.1| Oryza sativa (japonica cultivar-group) c... 56 1e-005
ref|XM_473295.1| Oryza sativa (japonica cultivar-group), p... 56 1e-005
ref|NT_079859.2| Oryza sativa (japonica cultivar-group) 56 1e-005
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 56 1e-005
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 56 1e-005
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 56 1e-005
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 56 1e-005
emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromoso... 56 1e-005
emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromoso... 56 1e-005
gb|AQ364476.2|AQ364476 nbxb0061G19f CUGI Rice BAC Library O... 54 6e-005
gb|CZ555484.1|CZ555484 M0027756 AS_TRIM_TDNA_B1 Oryza sativ... 54 6e-005
gb|C74144.1|C74144 C74144 Rice panicle shorter than 3cm Ory... 54 6e-005
gb|AU082166.1|AU082166 AU082166 Rice cDNA from young root O... 54 6e-005
gb|CA758808.1|CA758808 BR030025000_PLATE_F07_54_061.ab1 OA ... 54 6e-005
dbj|AK111782.1| Oryza sativa (japonica cultivar-group) cDNA... 54 6e-005
dbj|AK111960.1| Oryza sativa (japonica cultivar-group) cDNA... 54 6e-005
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 54 6e-005
gb|AACV01002173.1| Oryza sativa (japonica cultivar-group) c... 54 6e-005
gb|AACV01010415.1| Oryza sativa (japonica cultivar-group) c... 54 6e-005
gb|AACV01022477.1| Oryza sativa (japonica cultivar-group) c... 54 6e-005
ref|NM_192221.1| Oryza sativa (japonica cultivar-group), p... 54 6e-005
dbj|AP003245.4| Oryza sativa (japonica cultivar-group) geno... 54 6e-005
gb|AC135794.3| Oryza sativa (japonica cultivar-group) chrom... 54 6e-005
gb|AC134044.4| Oryza sativa (japonica cultivar-group) chrom... 54 6e-005
gb|CZ557603.1|CZ557603 M0035221 AS_TRIM_TDNA_B1 Oryza sativ... 52 2e-004
gb|CA755385.1|CA755385 BR030019000_PLATE_E12_93_098.ab1 OA ... 52 2e-004
gb|CB645413.1|CB645413 OSJNEb07B01.f OSJNEb Oryza sativa (j... 52 2e-004
gb|CB646439.1|CB646439 OSJNEb08O20.f OSJNEb Oryza sativa (j... 52 2e-004
gb|CB647549.1|CB647549 OSJNEb10I09.r OSJNEb Oryza sativa (j... 52 2e-004
gb|CB647551.1|CB647551 OSJNEb10I10.r OSJNEb Oryza sativa (j... 52 2e-004
gb|CB649485.1|CB649485 OSJNEb13H02.f OSJNEb Oryza sativa (j... 52 2e-004
gb|CB651228.1|CB651228 OSJNEb16B21.f OSJNEb Oryza sativa (j... 52 2e-004
gb|CB651229.1|CB651229 OSJNEb16B21.r OSJNEb Oryza sativa (j... 52 2e-004
gb|CB651480.1|CB651480 OSJNEb16H08.f OSJNEb Oryza sativa (j... 52 2e-004
gb|CB651481.1|CB651481 OSJNEb16H08.r OSJNEb Oryza sativa (j... 52 2e-004
gb|CB655152.1|CB655152 OSJNEc08E13.f OSJNEc Oryza sativa (j... 52 2e-004
gb|CB655153.1|CB655153 OSJNEc08E13.r OSJNEc Oryza sativa (j... 52 2e-004
gb|CB655500.1|CB655500 OSJNEc09A01.f OSJNEc Oryza sativa (j... 52 2e-004
gb|CB655501.1|CB655501 OSJNEc09A01.r OSJNEc Oryza sativa (j... 52 2e-004
gb|CB663811.1|CB663811 OSJNEd09C20.r OSJNEd Oryza sativa (j... 52 2e-004
gb|CB667792.1|CB667792 OSJNEd15E21.f OSJNEd Oryza sativa (j... 52 2e-004
dbj|AK061823.1| Oryza sativa (japonica cultivar-group) cDNA... 52 2e-004
dbj|AK066180.1| Oryza sativa (japonica cultivar-group) cDNA... 52 2e-004
dbj|AP003737.4| Oryza sativa (japonica cultivar-group) geno... 52 2e-004
dbj|AP003629.3| Oryza sativa (japonica cultivar-group) geno... 52 2e-004
gb|AACV01003132.1| Oryza sativa (japonica cultivar-group) c... 52 2e-004
gb|AACV01014505.1| Oryza sativa (japonica cultivar-group) c... 52 2e-004
gb|AACV01016284.1| Oryza sativa (japonica cultivar-group) c... 52 2e-004
gb|AACV01025650.1| Oryza sativa (japonica cultivar-group) C... 52 2e-004
ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA 52 2e-004
ref|NM_189493.1| Oryza sativa (japonica cultivar-group), p... 52 2e-004
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 52 2e-004
dbj|AP004259.2| Oryza sativa (japonica cultivar-group) geno... 52 2e-004
dbj|AP004006.5| Oryza sativa (japonica cultivar-group) geno... 52 2e-004
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) geno... 52 2e-004
gb|CH401286.1| Oryza sativa (japonica cultivar-group) scaff... 52 2e-004
gb|AY569615.1| Oryza sativa (japonica cultivar-group) MYB t... 52 2e-004
dbj|AB212075.1| Oryza sativa (japonica cultivar-group) mRNA... 52 2e-004
gb|AQ160956.1|AQ160956 nbxb0006A18r CUGI Rice BAC Library O... 50 0.001
gb|C74411.2|C74411 C74411 Rice panicle shorter than 3cm Ory... 50 0.001
gb|CB645414.1|CB645414 OSJNEb07B01.r OSJNEb Oryza sativa (j... 50 0.001
gb|CF326047.1|CF326047 JMT1--04-P11.g1 AtJMT-overexpressing... 50 0.001
dbj|AK111808.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK112117.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbar... 50 0.001
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AACV01002127.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01006164.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01009913.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01016563.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01017273.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|NM_192085.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_478689.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_480122.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|NT_107190.1| Oryza sativa (japonica cultivar-group) 50 0.001
dbj|AP005195.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP003347.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
emb|X96749.1|OSMYB72 O.sativa myb7 gene, clone myb72 50 0.001
emb|Y11415.1|OSMYB1355 O.sativa mRNA for myb factor, 1355 bp 50 0.001
gb|AQ325627.1|AQ325627 nbxb0015P21f CUGI Rice BAC Library O... 48 0.004
gb|AY873246.1|AY873246 04ET3_013_I_007_019_029C07 Oryza sat... 48 0.004
gb|C91733.1|C91733 C91733 Rice panicle shorter than 3cm Ory... 48 0.004
gb|AU055948.1|AU055948 AU055948 Oryza sativa mature leaf Ni... 48 0.004
gb|CB665378.1|CB665378 OSJNEd11L19.f OSJNEd Oryza sativa (j... 48 0.004
gb|CB665379.1|CB665379 OSJNEd11L19.r OSJNEd Oryza sativa (j... 48 0.004
gb|CB665403.1|CB665403 OSJNEd11M19.r OSJNEd Oryza sativa (j... 48 0.004
gb|CB670027.1|CB670027 OSJNEe02O10.r OSJNEe Oryza sativa (j... 48 0.004
gb|AY026332.1| Oryza sativa Myb transcription factor JAMyb ... 48 0.004
gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein... 48 0.004
dbj|AK072403.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.004
dbj|AK107214.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.004
dbj|AK112018.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.004
emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC O... 48 0.004
emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC O... 48 0.004
gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone... 48 0.004
gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 ... 48 0.004
gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbar... 48 0.004
gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 ... 48 0.004
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 48 0.004
gb|AC135190.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.004
gb|AACV01001493.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01006437.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01008001.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01009955.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01023759.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01025277.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01025291.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 48 0.004
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 48 0.004
ref|NM_192243.1| Oryza sativa (japonica cultivar-group), p... 48 0.004
ref|NM_193333.1| Oryza sativa (japonica cultivar-group), p... 48 0.004
ref|XM_470673.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.004
ref|XM_472825.1| Oryza sativa (japonica cultivar-group), p... 48 0.004
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 48 0.004
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 48 0.004
dbj|AP004231.3| Oryza sativa (japonica cultivar-group) geno... 48 0.004
dbj|AP004232.4| Oryza sativa (japonica cultivar-group) geno... 48 0.004
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.004
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.004
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.004
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.004
emb|AJ495785.1|OSA495785 Oryza sativa (japonica cultivar-gr... 48 0.004
emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromoso... 48 0.004
gb|DQ075261.1| Oryza sativa (japonica cultivar-group) MYB t... 48 0.004
gb|DQ075262.1| Oryza sativa (japonica cultivar-group) MYB t... 48 0.004
gb|DQ075263.2| Oryza sativa (japonica cultivar-group) MYB t... 48 0.004
gb|C72014.1|C72014 C72014 Rice panicle at flowering stage O... 46 0.014
gb|C72644.1|C72644 C72644 Rice panicle at flowering stage O... 46 0.014
gb|CB645415.1|CB645415 OSJNEb07B02.f OSJNEb Oryza sativa (j... 46 0.014
gb|CB682826.1|CB682826 OSJNEf10I12.f OSJNEf Oryza sativa (j... 46 0.014
gb|BP432988.1|BP432988 BP432988 Oryza sativa (japonica cult... 46 0.014
gb|AC090973.1|AC090973 Oryza sativa (japonica cultivar-grou... 46 0.014
gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein... 46 0.014
dbj|AK059468.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.014
dbj|AK103455.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.014
dbj|AK109125.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.014
gb|AY323484.1| Oryza sativa (japonica cultivar-group) myb-r... 46 0.014
dbj|AK111798.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.014
gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone... 46 0.014
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 46 0.014
gb|AACV01000343.1| Oryza sativa (japonica cultivar-group) c... 46 0.014
gb|AACV01003526.1| Oryza sativa (japonica cultivar-group) c... 46 0.014
gb|AACV01010119.1| Oryza sativa (japonica cultivar-group) c... 46 0.014
gb|AACV01017050.1| Oryza sativa (japonica cultivar-group) c... 46 0.014
gb|AACV01018535.1| Oryza sativa (japonica cultivar-group) c... 46 0.014
ref|NM_185512.2| Oryza sativa (japonica cultivar-group), mRNA 46 0.014
ref|XM_473184.1| Oryza sativa (japonica cultivar-group), p... 46 0.014
ref|XM_482547.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.014
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 46 0.014
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 46 0.014
dbj|AP002743.1| Oryza sativa (japonica cultivar-group) geno... 46 0.014
dbj|AP002746.2| Oryza sativa (japonica cultivar-group) geno... 46 0.014
ref|NM_189671.1| Oryza sativa (japonica cultivar-group), p... 46 0.014
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 46 0.014
dbj|AP005849.3| Oryza sativa (japonica cultivar-group) geno... 46 0.014
dbj|AP003816.2| Oryza sativa (japonica cultivar-group) geno... 46 0.014
dbj|AP004666.4| Oryza sativa (japonica cultivar-group) geno... 46 0.014
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.014
emb|AJ237661.1|OSA237661 Oryza sativa mRNA for Myb factor p... 46 0.014
emb|AJ495796.1|OSA495796 Oryza sativa (japonica cultivar-gr... 46 0.014
emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromoso... 46 0.014
emb|Y11414.1|OSMYB1202 O.sativa mRNA for myb factor, 1202 bp 46 0.014
gb|AQ688548.1|AQ688548 nbxb0077J20f CUGI Rice BAC Library O... 44 0.057
gb|CG408359.1|CG408359 Ds49 Ds insertion lines Oryza sativa... 44 0.057
gb|C73814.1|C73814 C73814 Rice panicle (longer than 10cm) O... 44 0.057
dbj|AK099283.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.057
dbj|AK109620.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.057
dbj|AK111807.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.057
gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbar... 44 0.057
gb|AC122149.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.057
gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbar... 44 0.057
dbj|AP004083.2| Oryza sativa (japonica cultivar-group) geno... 44 0.057
dbj|AP003980.3| Oryza sativa (japonica cultivar-group) geno... 44 0.057
dbj|AP002871.2| Oryza sativa (japonica cultivar-group) geno... 44 0.057
dbj|AP002873.2| Oryza sativa (japonica cultivar-group) geno... 44 0.057
gb|AACV01000256.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
gb|AACV01000840.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
gb|AACV01004769.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
gb|AACV01004921.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
gb|AACV01005857.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
gb|AACV01006413.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
gb|AACV01010086.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
gb|AACV01025048.1| Oryza sativa (japonica cultivar-group) c... 44 0.057
ref|NM_189302.1| Oryza sativa (japonica cultivar-group), p... 44 0.057
ref|XM_462803.1| Oryza sativa (japonica cultivar-group), p... 44 0.057
ref|XM_466772.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.057
ref|XM_473120.1| Oryza sativa (japonica cultivar-group), p... 44 0.057
ref|XM_506868.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.057
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 44 0.057
ref|XM_550262.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.057
emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromoso... 44 0.057
gb|AQ274382.1|AQ274382 nbxb0035E14r CUGI Rice BAC Library O... 42 0.22
gb|AQ274388.1|AQ274388 nbxb0035G02r CUGI Rice BAC Library O... 42 0.22
gb|AQ509965.1|AQ509965 nbxb0094H15r CUGI Rice BAC Library O... 42 0.22
gb|AQ509390.1|AQ509390 nbxb0096O15r CUGI Rice BAC Library O... 42 0.22
gb|D24724.1|D24724 RICR2443A Rice root Oryza sativa (japoni... 42 0.22
gb|AU055831.1|AU055831 AU055831 Oryza sativa mature leaf Ni... 42 0.22
gb|CA755849.1|CA755849 BR030029000_PLATE_F08_62_074.ab1 OA ... 42 0.22
gb|CA755926.1|CA755926 BR030031000_PLATE_D02_12_016.ab1 OA ... 42 0.22
dbj|AK066775.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.22
dbj|AK069082.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.22
dbj|AK107047.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.22
dbj|AK107424.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.22
dbj|AK110683.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.22
dbj|AK111788.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.22
dbj|AK119593.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.22
gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 ... 42 0.22
dbj|AP004683.3| Oryza sativa (japonica cultivar-group) geno... 42 0.22
dbj|AP005652.3| Oryza sativa (japonica cultivar-group) geno... 42 0.22
dbj|AP002860.1| Oryza sativa (japonica cultivar-group) geno... 42 0.22
gb|AACV01000122.1| Oryza sativa (japonica cultivar-group) c... 42 0.22
>gb|AF474136.1| Oryza sativa typical P-type R2R3 Myb protein gene, partial cds
Length = 1022
Score = 230 bits (116), Expect = 5e-058
Identities = 227/263 (86%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 526 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 467
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 466 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 407
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 406 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 349
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| ||||||||| |||||
Sbjct: 348 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtcaagaacttctgga 289
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 288 acacccacctcaagaagaagctc 266
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete
sequence
Length = 148021
Score = 230 bits (116), Expect = 5e-058
Identities = 227/263 (86%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 126898 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 126839
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 126838 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 126779
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 126778 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 126721
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| ||||||||| |||||
Sbjct: 126720 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtcaagaacttctgga 126661
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 126660 acacccacctcaagaagaagctc 126638
>ref|XM_470731.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 924
Score = 230 bits (116), Expect = 5e-058
Identities = 227/263 (86%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 88 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 147
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 148 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 207
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 208 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 265
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| ||||||||| |||||
Sbjct: 266 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtcaagaacttctgga 325
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 326 acacccacctcaagaagaagctc 348
>ref|NT_079854.2| Oryza sativa (japonica cultivar-group)
Length = 2592259
Score = 230 bits (116), Expect = 5e-058
Identities = 227/263 (86%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 1196502 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 1196561
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 1196562 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 1196621
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 1196622 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 1196679
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| ||||||||| |||||
Sbjct: 1196680 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtcaagaacttctgga 1196739
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 1196740 acacccacctcaagaagaagctc 1196762
Score = 65.9 bits (33), Expect = 2e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||| |||||||||||||||||||| | ||||||||||| |||||
Sbjct: 1742700 gacaacgagatcaagaactactggaacacgcgcctcaagaagaggctca 1742652
Score = 48.1 bits (24), Expect = 0.004
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
||||||||||| ||||||||| ||||||| | || |||||||||||||||
Sbjct: 827824 accgacaacgaggtcaagaacttctggaactcgtacatcaagaagaagctca 827773
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 230 bits (116), Expect = 5e-058
Identities = 227/263 (86%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 14800404 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 14800463
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 14800464 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 14800523
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 14800524 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 14800581
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| ||||||||| |||||
Sbjct: 14800582 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtcaagaacttctgga 14800641
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 14800642 acacccacctcaagaagaagctc 14800664
Score = 71.9 bits (36), Expect = 3e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgcccc 108
|||||| ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 21014019 cgctgcggcaagagctgccgcctccggtggaccaaccacctccgcccc 21014066
Score = 65.9 bits (33), Expect = 2e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||| |||||||||||||||||||| | ||||||||||| |||||
Sbjct: 15345958 gacaacgagatcaagaactactggaacacgcgcctcaagaagaggctca 15345910
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaact 127
||||||||||||| ||||| ||| |||||||||||||||| | ||||||| ||||||
Sbjct: 11297243 gcaagagctgccggctccggtggctgaactacctccgccccgacctccggcgaggcaaca 11297184
Query: 128 tcac 131
||||
Sbjct: 11297183 tcac 11297180
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacac 250
|||||||| ||||||||||||||||||||
Sbjct: 21014289 gacaacgagatcaagaactactggaacac 21014317
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 221 cgacaacgacatcaagaactactggaacacccacctc 257
|||||||| |||||||||| ||||||||||||||||
Sbjct: 7152220 cgacaacgccatcaagaaccgctggaacacccacctc 7152256
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 31740445 gacaatgacatcaagaactattggaacacgaggctcaagaagaagctc 31740398
Score = 48.1 bits (24), Expect = 0.004
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
||||||||||| ||||||||| ||||||| | || |||||||||||||||
Sbjct: 14432127 accgacaacgaggtcaagaacttctggaactcgtacatcaagaagaagctca 14432076
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 205 acctcccgcagagaaccgacaacgacatcaagaactactggaac 248
|||||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 10677998 acctcccggggaggacggacaacgagatcaagaactactggaac 10677955
Score = 46.1 bits (23), Expect = 0.014
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgg 245
||||||||||| |||||||||||||||
Sbjct: 11297094 accgacaacgagatcaagaactactgg 11297068
Score = 44.1 bits (22), Expect = 0.057
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacc 251
||||||||| | ||||||||||||||||||
Sbjct: 10333703 gacaacgacgtgaagaactactggaacacc 10333674
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| |||||||||||||||| || ||| ||||||||
Sbjct: 2324385 gacaacgagatcaagaactactggaggacgcacttcaagaag 2324344
Score = 42.1 bits (21), Expect = 0.22
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccg 104
||||||||||||||||||| ||| |||||||||||
Sbjct: 31740762 gcaagagctgccgcctccggtggctgaactacctccg 31740726
Score = 42.1 bits (21), Expect = 0.22
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 217 gaaccgacaacgacatcaagaactactggaaca 249
|||| ||||| || |||||||||||||||||||
Sbjct: 16686344 gaacagacaatgaaatcaagaactactggaaca 16686312
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 230 bits (116), Expect = 5e-058
Identities = 227/263 (86%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 14805870 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 14805929
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 14805930 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 14805989
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 14805990 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 14806047
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| ||||||||| |||||
Sbjct: 14806048 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtcaagaacttctgga 14806107
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 14806108 acacccacctcaagaagaagctc 14806130
Score = 71.9 bits (36), Expect = 3e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgcccc 108
|||||| ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 21020990 cgctgcggcaagagctgccgcctccggtggaccaaccacctccgcccc 21021037
Score = 65.9 bits (33), Expect = 2e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||| |||||||||||||||||||| | ||||||||||| |||||
Sbjct: 15351424 gacaacgagatcaagaactactggaacacgcgcctcaagaagaggctca 15351376
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaact 127
||||||||||||| ||||| ||| |||||||||||||||| | ||||||| ||||||
Sbjct: 11300480 gcaagagctgccggctccggtggctgaactacctccgccccgacctccggcgaggcaaca 11300421
Query: 128 tcac 131
||||
Sbjct: 11300420 tcac 11300417
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacac 250
|||||||| ||||||||||||||||||||
Sbjct: 21021260 gacaacgagatcaagaactactggaacac 21021288
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 221 cgacaacgacatcaagaactactggaacacccacctc 257
|||||||| |||||||||| ||||||||||||||||
Sbjct: 7154325 cgacaacgccatcaagaaccgctggaacacccacctc 7154361
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 31649929 gacaatgacatcaagaactattggaacacgaggctcaagaagaagctc 31649882
Score = 48.1 bits (24), Expect = 0.004
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
||||||||||| ||||||||| ||||||| | || |||||||||||||||
Sbjct: 14437152 accgacaacgaggtcaagaacttctggaactcgtacatcaagaagaagctca 14437101
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 205 acctcccgcagagaaccgacaacgacatcaagaactactggaac 248
|||||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 10679897 acctcccggggaggacggacaacgagatcaagaactactggaac 10679854
Score = 46.1 bits (23), Expect = 0.014
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgg 245
||||||||||| |||||||||||||||
Sbjct: 11300331 accgacaacgagatcaagaactactgg 11300305
Score = 44.1 bits (22), Expect = 0.057
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacc 251
||||||||| | ||||||||||||||||||
Sbjct: 10335602 gacaacgacgtgaagaactactggaacacc 10335573
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| |||||||||||||||| || ||| ||||||||
Sbjct: 2324275 gacaacgagatcaagaactactggaggacgcacttcaagaag 2324234
Score = 42.1 bits (21), Expect = 0.22
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccg 104
||||||||||||||||||| ||| |||||||||||
Sbjct: 31650246 gcaagagctgccgcctccggtggctgaactacctccg 31650210
Score = 42.1 bits (21), Expect = 0.22
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 217 gaaccgacaacgacatcaagaactactggaaca 249
|||| ||||| || |||||||||||||||||||
Sbjct: 16692711 gaacagacaatgaaatcaagaactactggaaca 16692679
>ref|XM_482584.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 933
Score = 222 bits (112), Expect = 1e-055
Identities = 232/271 (85%), Gaps = 2/271 (0%)
Strand = Plus / Plus
Query: 5 tccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgct 64
||||||||||||||||||||||||||||| ||||||||| |||||| || || ||||| |
Sbjct: 86 tccaggagcacggcccgggcaactggcgcgccgtgcccaccaacaccgggctgatgcggt 145
Query: 65 gcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggca 124
|||||||||||||||| ||||| ||||||||||||||||| || || ||| ||| || |
Sbjct: 146 gcagcaagagctgccggctccggtggaccaactacctccggccggggatcaagcggggga 205
Query: 125 acttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacag 184
|||||||| | || ||||| ||||||||||||||||| || | |||||||||||
Sbjct: 206 acttcacc--gaccaggaggagaagctcatcgtccacctccaggccctcctcggcaacag 263
Query: 185 gtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactg 244
|||||| || || || || ||| | ||| |||| || |||||||||||||||||||||||
Sbjct: 264 gtgggcggcgatcgcgtcctacttgccggagaggacggacaacgacatcaagaactactg 323
Query: 245 gaacacccacctcaagaagaagctcaagaag 275
|||||| ||||||||||||||||||||||||
Sbjct: 324 gaacacgcacctcaagaagaagctcaagaag 354
>gb|AACV01006741.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006741, whole
genome shotgun sequence
Length = 75284
Score = 214 bits (108), Expect = 3e-053
Identities = 225/263 (85%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 73694 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 73753
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 73754 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 73813
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 73814 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 73871
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| | || |||| |||||
Sbjct: 73872 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtaaaaaacttctgga 73931
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 73932 acacccacctcaagaagaagctc 73954
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 214 bits (108), Expect = 3e-053
Identities = 225/263 (85%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 1422082 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 1422141
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 1422142 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 1422201
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 1422202 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 1422259
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| | || |||| |||||
Sbjct: 1422260 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtaaaaaacttctgga 1422319
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 1422320 acacccacctcaagaagaagctc 1422342
Score = 71.9 bits (36), Expect = 3e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgcccc 108
|||||| ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 7486652 cgctgcggcaagagctgccgcctccggtggaccaaccacctccgcccc 7486699
Score = 65.9 bits (33), Expect = 2e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||| |||||||||||||||||||| | ||||||||||| |||||
Sbjct: 1918873 gacaacgagatcaagaactactggaacacgcgcctcaagaagaggctca 1918825
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacac 250
|||||||| ||||||||||||||||||||
Sbjct: 7486923 gacaacgagatcaagaactactggaacac 7486951
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 214 bits (108), Expect = 3e-053
Identities = 225/263 (85%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 7 caggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatgcgctgc 66
||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||
Sbjct: 15472789 caggagcacggcccgggcaactggcgcgccgtgccgcccaggacgggcctcctccgctgc 15472848
Query: 67 agcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaac 126
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 15472849 agcaagagctgccgcctccgctggaccaactacctccgcccgggcatccgccgcggcggc 15472908
Query: 127 ttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaacaggt 186
||| ||| |||||||| | ||||| ||||||||||| || | ||||||||| | |
Sbjct: 15472909 ttctccc--accacgaggagcgcctcatcctccacctccaggccctcctcggcaaccgct 15472966
Query: 187 gggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactgga 246
|||||||||| || || |||||||| || | |||||||||||| | || |||| |||||
Sbjct: 15472967 gggccgccatcgcctcctacctcccccaccgcaccgacaacgacgtaaaaaacttctgga 15473026
Query: 247 acacccacctcaagaagaagctc 269
|||||||||||||||||||||||
Sbjct: 15473027 acacccacctcaagaagaagctc 15473049
Score = 75.8 bits (38), Expect = 2e-011
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
||||| |||||||||||||| ||||||||||||||| | |||||||||||||||
Sbjct: 7389070 agaacggacaacgacatcaaaaactactggaacaccaagctcaagaagaagctc 7389123
Score = 71.9 bits (36), Expect = 3e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgcccc 108
|||||| ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 21537359 cgctgcggcaagagctgccgcctccggtggaccaaccacctccgcccc 21537406
Score = 65.9 bits (33), Expect = 2e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||| |||||||||||||||||||| | ||||||||||| |||||
Sbjct: 15969580 gacaacgagatcaagaactactggaacacgcgcctcaagaagaggctca 15969532
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaact 127
||||||||||||| ||||| ||| |||||||||||||||| | ||||||| ||||||
Sbjct: 11584047 gcaagagctgccggctccggtggctgaactacctccgccccgacctccggcgaggcaaca 11583988
Query: 128 tcac 131
||||
Sbjct: 11583987 tcac 11583984
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacac 250
|||||||| ||||||||||||||||||||
Sbjct: 21537630 gacaacgagatcaagaactactggaacac 21537658
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 221 cgacaacgacatcaagaactactggaacacccacctc 257
|||||||| |||||||||| ||||||||||||||||
Sbjct: 7350244 cgacaacgccatcaagaaccgctggaacacccacctc 7350280
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 32556110 gacaatgacatcaagaactattggaacacgaggctcaagaagaagctc 32556063
Score = 48.1 bits (24), Expect = 0.004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 205 acctcccgcagagaaccgacaacgacatcaagaactactggaac 248
|||||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 10958737 acctcccggggaggacggacaacgagatcaagaactactggaac 10958694
Score = 46.1 bits (23), Expect = 0.014
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgg 245
||||||||||| |||||||||||||||
Sbjct: 11583898 accgacaacgagatcaagaactactgg 11583872
Score = 44.1 bits (22), Expect = 0.057
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacc 251
||||||||| | ||||||||||||||||||
Sbjct: 10608957 gacaacgacgtgaagaactactggaacacc 10608928
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| |||||||||||||||| || ||| ||||||||
Sbjct: 2512757 gacaacgagatcaagaactactggaggacgcacttcaagaag 2512716
Score = 42.1 bits (21), Expect = 0.22
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccg 104
||||||||||||||||||| ||| |||||||||||
Sbjct: 32556427 gcaagagctgccgcctccggtggctgaactacctccg 32556391
Score = 42.1 bits (21), Expect = 0.22
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 217 gaaccgacaacgacatcaagaactactggaaca 249
|||| ||||| || |||||||||||||||||||
Sbjct: 12281720 gaacagacaatgaaatcaagaactactggaaca 12281752
>gb|CB658779.1|CB658779 OSJNEc15B08.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc15B08 5', mRNA sequence
Length = 801
Score = 202 bits (102), Expect = 1e-049
Identities = 228/269 (84%), Gaps = 2/269 (0%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||| || |||||||| ||||||||| | || || ||||||||||| || || |||
Sbjct: 190 tacatccaagaacacggccccggcaactggagatcggttcccatcaacacagggctgatg 249
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
| ||||||||||||||| | || || ||||| |||||||| || || || || ||||
Sbjct: 250 aggtgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgc 309
Query: 121 ggcaacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggca 180
||||||||||| || |||||||| | |||||||||||||||||||| |||||||||
Sbjct: 310 ggcaacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggca 367
Query: 181 acaggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaact 240
|| | ||||||||||| || || |||||||| ||| | ||||||||||||||||||||||
Sbjct: 368 accgctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaact 427
Query: 241 actggaacacccacctcaagaagaagctc 269
|||||||||||||||||||||||||||||
Sbjct: 428 actggaacacccacctcaagaagaagctc 456
>dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B04, full
insert sequence
Length = 1087
Score = 194 bits (98), Expect = 3e-047
Identities = 227/269 (84%), Gaps = 2/269 (0%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||| || |||||||| ||||||||| | || || ||||||||||| || || |||
Sbjct: 190 tacatccaagaacacggccccggcaactggagatcggttcccatcaacactgggctgatg 249
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
| ||||||||||||||| | || || ||||| |||||||| || || || || ||||
Sbjct: 250 aggtgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgc 309
Query: 121 ggcaacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggca 180
||||||||||| || |||||||| | |||||||||||||||||||| | |||||||
Sbjct: 310 ggcaacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggca 367
Query: 181 acaggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaact 240
|| | ||||||||||| || || |||||||| ||| | ||||||||||||||||||||||
Sbjct: 368 accgctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaact 427
Query: 241 actggaacacccacctcaagaagaagctc 269
|||||||||||||||||||||||||||||
Sbjct: 428 actggaacacccacctcaagaagaagctc 456
>emb|Y11352.1|OSMYB1308 O.sativa mRNA for myb factor, 1308 bp
Length = 1308
Score = 194 bits (98), Expect = 3e-047
Identities = 227/269 (84%), Gaps = 2/269 (0%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||| || |||||||| ||||||||| | || || ||||||||||| || || |||
Sbjct: 196 tacatccaagaacacggccccggcaactggagatcggttcccatcaacactgggctgatg 255
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
| ||||||||||||||| | || || ||||| |||||||| || || || || ||||
Sbjct: 256 aggtgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgc 315
Query: 121 ggcaacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggca 180
||||||||||| || |||||||| | |||||||||||||||||||| | |||||||
Sbjct: 316 ggcaacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggca 373
Query: 181 acaggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaact 240
|| | ||||||||||| || || |||||||| ||| | ||||||||||||||||||||||
Sbjct: 374 accgctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaact 433
Query: 241 actggaacacccacctcaagaagaagctc 269
|||||||||||||||||||||||||||||
Sbjct: 434 actggaacacccacctcaagaagaagctc 462
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0056E15, complete sequence
Length = 147941
Score = 172 bits (87), Expect = 9e-041
Identities = 177/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Plus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 71008 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 71067
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 71068 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggcaacc 71125
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 71126 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 71185
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 71186 ggaacacccacctcaagaagaagctc 71211
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 70842 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 70891
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 172 bits (87), Expect = 9e-041
Identities = 177/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 317889 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 317830
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 317829 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggcaacc 317772
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 317771 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 317712
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 317711 ggaacacccacctcaagaagaagctc 317686
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 318055 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 318006
>gb|AACV01022281.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022281, whole
genome shotgun sequence
Length = 29757
Score = 172 bits (87), Expect = 9e-041
Identities = 177/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 9077 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 9018
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 9017 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggcaacc 8960
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 8959 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 8900
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 8899 ggaacacccacctcaagaagaagctc 8874
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 9243 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 9194
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 172 bits (87), Expect = 9e-041
Identities = 177/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1007022 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1006963
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 1006962 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggcaacc 1006905
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1006904 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1006845
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1006844 ggaacacccacctcaagaagaagctc 1006819
Score = 54.0 bits (27), Expect = 6e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||| ||| |||||
Sbjct: 3834347 gacaacgagatcaagaactactggaacacgcacatcaag 3834385
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1007188 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1007139
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 172 bits (87), Expect = 9e-041
Identities = 177/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1309314 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1309255
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 1309254 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggcaacc 1309197
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1309196 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1309137
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1309136 ggaacacccacctcaagaagaagctc 1309111
Score = 97.6 bits (49), Expect = 4e-018
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 182 caggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaacta 241
||||||||| || || || || |||||||| || ||||| ||||||||||||||||||||
Sbjct: 16892398 caggtgggcagcaatagcctcctacctcccccaaagaacagacaacgacatcaagaacta 16892339
Query: 242 ctggaacacccacctcaagaagaag 266
||||||||| |||||||||||||||
Sbjct: 16892338 ctggaacacacacctcaagaagaag 16892314
Score = 54.0 bits (27), Expect = 6e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||| ||| |||||
Sbjct: 4136639 gacaacgagatcaagaactactggaacacgcacatcaag 4136677
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgccc 42
||||||||| |||| ||||| || ||||||||||||||||||
Sbjct: 16893675 tacatccagcagcatggccccgggaactggcgctccgtgccc 16893634
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 219 accgacaacgacatcaagaactactgga 246
||||||||||| ||||||||||||||||
Sbjct: 21881556 accgacaacgagatcaagaactactgga 21881583
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1309480 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1309431
Score = 42.1 bits (21), Expect = 0.22
Identities = 96/120 (80%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||| | | || || ||| ||| |||
Sbjct: 16893431 tgcagcaagagctgcaggctgcggtggacgaactacttgagaccggggatcaagcgtggc 16893372
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
||||||||||| ||| ||||| | |||||| ||||||||||| | ||||| |||||||
Sbjct: 16893371 aacttcacccc--tcatgaggaggggatcatcatccacctccaggcattgcttggcaaca 16893314
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 172 bits (87), Expect = 9e-041
Identities = 177/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1319607 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1319548
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 1319547 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggcaacc 1319490
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1319489 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1319430
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1319429 ggaacacccacctcaagaagaagctc 1319404
Score = 97.6 bits (49), Expect = 4e-018
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 182 caggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaacta 241
||||||||| || || || || |||||||| || ||||| ||||||||||||||||||||
Sbjct: 19906513 caggtgggcagcaatagcctcctacctcccccaaagaacagacaacgacatcaagaacta 19906454
Query: 242 ctggaacacccacctcaagaagaag 266
||||||||| |||||||||||||||
Sbjct: 19906453 ctggaacacacacctcaagaagaag 19906429
Score = 54.0 bits (27), Expect = 6e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||| ||| |||||
Sbjct: 4030563 gacaacgagatcaagaactactggaacacgcacatcaag 4030601
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgccc 42
||||||||| |||| ||||| || ||||||||||||||||||
Sbjct: 19907790 tacatccagcagcatggccccgggaactggcgctccgtgccc 19907749
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgga 246
||||||||||| ||||||||||||||||
Sbjct: 26794449 accgacaacgagatcaagaactactgga 26794422
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1319773 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1319724
Score = 42.1 bits (21), Expect = 0.22
Identities = 96/120 (80%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||| | | || || ||| ||| |||
Sbjct: 19907546 tgcagcaagagctgcaggctgcggtggacgaactacttgagaccggggatcaagcgtggc 19907487
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
||||||||||| ||| ||||| | |||||| ||||||||||| | ||||| |||||||
Sbjct: 19907486 aacttcacccc--tcatgaggaggggatcatcatccacctccaggcattgcttggcaaca 19907429
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 172 bits (87), Expect = 9e-041
Identities = 177/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1317328 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1317269
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 1317268 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgctgctcggcaacc 1317211
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1317210 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1317151
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1317150 ggaacacccacctcaagaagaagctc 1317125
Score = 97.6 bits (49), Expect = 4e-018
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 182 caggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaacta 241
||||||||| || || || || |||||||| || ||||| ||||||||||||||||||||
Sbjct: 20191492 caggtgggcagcaatagcctcctacctcccccaaagaacagacaacgacatcaagaacta 20191433
Query: 242 ctggaacacccacctcaagaagaag 266
||||||||| |||||||||||||||
Sbjct: 20191432 ctggaacacacacctcaagaagaag 20191408
Score = 54.0 bits (27), Expect = 6e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||| ||| |||||
Sbjct: 4039257 gacaacgagatcaagaactactggaacacgcacatcaag 4039295
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgccc 42
||||||||| |||| ||||| || ||||||||||||||||||
Sbjct: 20192769 tacatccagcagcatggccccgggaactggcgctccgtgccc 20192728
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgga 246
||||||||||| ||||||||||||||||
Sbjct: 27121681 accgacaacgagatcaagaactactgga 27121654
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1317494 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1317445
Score = 42.1 bits (21), Expect = 0.22
Identities = 96/120 (80%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||| | | || || ||| ||| |||
Sbjct: 20192525 tgcagcaagagctgcaggctgcggtggacgaactacttgagaccggggatcaagcgtggc 20192466
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
||||||||||| ||| ||||| | |||||| ||||||||||| | ||||| |||||||
Sbjct: 20192465 aacttcacccc--tcatgaggaggggatcatcatccacctccaggcattgcttggcaaca 20192408
>dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G05, full
insert sequence
Length = 1680
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1062 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1003
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 1002 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 945
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 944 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 885
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 884 ggaacacccacctcaagaagaagctc 859
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1258 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1209
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 121556
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Plus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 92203 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 92262
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 92263 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 92320
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 92321 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 92380
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 92381 ggaacacccacctcaagaagaagctc 92406
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 92007 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 92056
>gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone CL000798.1 R2R3-MYB gene
region
Length = 12635
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 5851 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 5792
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 5791 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 5734
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 5733 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 5674
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 5673 ggaacacccacctcaagaagaagctc 5648
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 6047 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 5998
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1200580 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1200521
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 1200520 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 1200463
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1200462 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1200403
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1200402 ggaacacccacctcaagaagaagctc 1200377
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1200776 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1200727
>gb|AACV01023895.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023895, whole
genome shotgun sequence
Length = 35815
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 31374 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 31315
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 31314 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 31257
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 31256 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 31197
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 31196 ggaacacccacctcaagaagaagctc 31171
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 31570 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 31521
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1128471 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1128412
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 1128411 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 1128354
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1128353 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1128294
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1128293 ggaacacccacctcaagaagaagctc 1128268
Score = 61.9 bits (31), Expect = 2e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||||||| |||||
Sbjct: 3703003 gacaacgagatcaagaactactggaacacccacatcaag 3703041
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1128667 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1128618
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1128471 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1128412
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 1128411 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 1128354
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1128353 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1128294
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1128293 ggaacacccacctcaagaagaagctc 1128268
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 60 gcgctgcagcaagagctgccgcctccgctggaccaactacctccgccccg 109
||||||| ||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 16691703 gcgctgcggcaagagctgccgcctccggtggatcaactacctccgccccg 16691654
Score = 61.9 bits (31), Expect = 2e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||||||| |||||
Sbjct: 3703003 gacaacgagatcaagaactactggaacacccacatcaag 3703041
Score = 48.1 bits (24), Expect = 0.004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctcc 103
||||||||||||||||||| ||| |||||||||||
Sbjct: 19518111 gcaagagctgccgcctccggtgggtcaactacctcc 19518076
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgga 246
||||||||||| ||||||||||||||||
Sbjct: 19305688 accgacaacgagatcaagaactactgga 19305661
Score = 44.1 bits (22), Expect = 0.057
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactggaac 248
||||||||||| |||||||||| |||||||
Sbjct: 16689869 accgacaacgagatcaagaacttctggaac 16689840
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1128667 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1128618
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1200579 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1200520
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 1200519 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 1200462
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1200461 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1200402
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1200401 ggaacacccacctcaagaagaagctc 1200376
Score = 87.7 bits (44), Expect = 4e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccg 116
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27188197 cgctgcggcaagagctgccgcctccgctggctcaactacctccgccccggcatccg 27188252
Score = 77.8 bits (39), Expect = 4e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaacttc 129
||||||||||||||||| |||| ||||||||||||||||| | || |||||||||||||
Sbjct: 3840278 aagagctgccgcctccggtggatcaactacctccgccccgacctcaagcgcggcaacttc 3840337
Query: 130 acc 132
|||
Sbjct: 3840338 acc 3840340
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 60 gcgctgcagcaagagctgccgcctccgctggaccaactacctccgccccg 109
||||||| ||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 20034975 gcgctgcggcaagagctgccgcctccggtggatcaactacctccgccccg 20034926
Score = 61.9 bits (31), Expect = 2e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||||||| |||||
Sbjct: 3840504 gacaacgagatcaagaactactggaacacccacatcaag 3840542
Score = 48.1 bits (24), Expect = 0.004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctcc 103
||||||||||||||||||| ||| |||||||||||
Sbjct: 23360222 gcaagagctgccgcctccggtgggtcaactacctcc 23360187
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgga 246
||||||||||| ||||||||||||||||
Sbjct: 23169422 accgacaacgagatcaagaactactgga 23169395
Score = 44.1 bits (22), Expect = 0.057
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactggaac 248
||||||||||| |||||||||| |||||||
Sbjct: 20033072 accgacaacgagatcaagaacttctggaac 20033043
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1200775 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1200726
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 165 bits (83), Expect = 2e-038
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 64 tgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggc 123
||||||||||||||| | || || ||||| |||||||| || || || || |||||||
Sbjct: 1200579 tgcagcaagagctgcaggctgcggtggacgaactacctgcggccggggataaagcgcggc 1200520
Query: 124 aacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggcaaca 183
|||||||| || |||||||| | |||||||||||||||||||| | |||||||||
Sbjct: 1200519 aacttcacggcg--cacgaggaggggatcatcgtccacctccagtcgcttctcggcaacc 1200462
Query: 184 ggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactact 243
| ||||||||||| || || |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 1200461 gctgggccgccatcgcctcctacctcccccagcgcaccgacaacgacatcaagaactact 1200402
Query: 244 ggaacacccacctcaagaagaagctc 269
||||||||||||||||||||||||||
Sbjct: 1200401 ggaacacccacctcaagaagaagctc 1200376
Score = 87.7 bits (44), Expect = 4e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccg 116
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27113797 cgctgcggcaagagctgccgcctccgctggctcaactacctccgccccggcatccg 27113852
Score = 77.8 bits (39), Expect = 4e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaacttc 129
||||||||||||||||| |||| ||||||||||||||||| | || |||||||||||||
Sbjct: 3840252 aagagctgccgcctccggtggatcaactacctccgccccgacctcaagcgcggcaacttc 3840311
Query: 130 acc 132
|||
Sbjct: 3840312 acc 3840314
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 60 gcgctgcagcaagagctgccgcctccgctggaccaactacctccgccccg 109
||||||| ||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 19961189 gcgctgcggcaagagctgccgcctccggtggatcaactacctccgccccg 19961140
Score = 61.9 bits (31), Expect = 2e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaag 260
|||||||| |||||||||||||||||||||||| |||||
Sbjct: 3840478 gacaacgagatcaagaactactggaacacccacatcaag 3840516
Score = 48.1 bits (24), Expect = 0.004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctcc 103
||||||||||||||||||| ||| |||||||||||
Sbjct: 23288413 gcaagagctgccgcctccggtgggtcaactacctcc 23288378
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactgga 246
||||||||||| ||||||||||||||||
Sbjct: 23097613 accgacaacgagatcaagaactactgga 23097586
Score = 44.1 bits (22), Expect = 0.057
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 219 accgacaacgacatcaagaactactggaac 248
||||||||||| |||||||||| |||||||
Sbjct: 19959286 accgacaacgagatcaagaacttctggaac 19959257
Score = 44.1 bits (22), Expect = 0.057
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||| || |||||||| ||||||||| | || || |||||||||||
Sbjct: 1200775 tacatccaagaacacggccccggcaactggagatcggttcccatcaacac 1200726
>dbj|AK110844.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B09, full
insert sequence
Length = 1464
Score = 149 bits (75), Expect = 1e-033
Identities = 219/266 (82%), Gaps = 2/266 (0%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
||||||||| |||| ||||| || |||||||||||||||||| ||||| || | |||
Sbjct: 275 tacatccagcagcatggccccgggaactggcgctccgtgcccgagaacaccggattgatg 334
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
| ||||||||||||||| | || || ||||| |||||| | | || || ||| |||
Sbjct: 335 aggtgcagcaagagctgcaggctgcggtggacgaactacttgagaccggggatcaagcgt 394
Query: 121 ggcaacttcaccccggtcacgaggaagccatcatcgtccacctccagtccttgctcggca 180
|||||||||||||| ||| ||||| | |||||| ||||||||||| | ||||| ||||
Sbjct: 395 ggcaacttcacccc--tcatgaggaggggatcatcatccacctccaggcattgcttggca 452
Query: 181 acaggtgggccgccattgcttcttacctcccgcagagaaccgacaacgacatcaagaact 240
||| |||||| || || || || |||||||| || ||||| |||||||||||||||||||
Sbjct: 453 acaagtgggcagcaatagcctcctacctcccccaaagaacagacaacgacatcaagaact 512
Query: 241 actggaacacccacctcaagaagaag 266
|||||||||| |||||||||||||||
Sbjct: 513 actggaacacacacctcaagaagaag 538
>gb|CB656158.1|CB656158 OSJNEc10C21.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10C21 5', mRNA sequence
Length = 412
Score = 137 bits (69), Expect = 5e-030
Identities = 111/125 (88%)
Strand = Plus / Plus
Query: 151 tcatcgtccacctccagtccttgctcggcaacaggtgggccgccattgcttcttacctcc 210
||||||||||||||||| || | ||||||||||||||||| || || || || ||| | |
Sbjct: 8 tcatcgtccacctccaggccctcctcggcaacaggtgggcggcgatcgcgtcctacttgc 67
Query: 211 cgcagagaaccgacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
|| |||| || ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 68 cggagaggacggacaacgacatcaagaactactggaacacgcacctcaagaagaagctca 127
Query: 271 agaag 275
|||||
Sbjct: 128 agaag 132
>gb|AACV01010414.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010414, whole
genome shotgun sequence
Length = 37080
Score = 113 bits (57), Expect = 7e-023
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 31936 cgctgcggcaagagctgccgcctccgctggaccaactacctccgccccgacatccgccgc 31995
Query: 121 ggcaacttc 129
|||||||||
Sbjct: 31996 ggcaacttc 32004
Score = 69.9 bits (35), Expect = 1e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
|||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 32279 gacaacgagatcaagaactactggaacacgcacatcaagaagaagct 32325
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 113 bits (57), Expect = 7e-023
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 7757457 cgctgcggcaagagctgccgcctccgctggaccaactacctccgccccgacatccgccgc 7757398
Query: 121 ggcaacttc 129
|||||||||
Sbjct: 7757397 ggcaacttc 7757389
Score = 69.9 bits (35), Expect = 1e-009
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
|||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 7757114 gacaacgagatcaagaactactggaacacgcacatcaagaagaagct 7757068
Score = 56.0 bits (28), Expect = 1e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
|||||||| |||||||| |||||||||||| || |||||||| |||||
Sbjct: 4466271 gacaacgagatcaagaattactggaacaccaacgtcaagaagcagctc 4466318
Score = 54.0 bits (27), Expect = 6e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaacttc 129
||||||||||| ||||| |||| |||||||||||| || | | || |||||||||||||
Sbjct: 7791048 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 7790989
Query: 130 acc 132
|||
Sbjct: 7790988 acc 7790986
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 7790794 gacaacgagatcaagaacgtctggaacacgcacctcaagaag 7790753
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccg 104
||||||||||||| ||||| ||||| |||||||||||
Sbjct: 874475 gcaagagctgccgactccggtggacgaactacctccg 874511
Score = 48.1 bits (24), Expect = 0.004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccg 109
||||||||||| || || ||||||||||||||||| ||||
Sbjct: 1383107 aagagctgccggctgcggtggaccaactacctccggcccg 1383068
Score = 46.1 bits (23), Expect = 0.014
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 59 tgcgctgcagcaagagctgccgcctccgctggaccaactacct 101
|||| ||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 3690621 tgcgttgcggcaagagctgccggctccggtggatcaactacct 3690579
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 3689914 gacaacgagatcaagaacgtgtggcacacccacctcaagaag 3689873
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| |||||||||||||||| || ||| ||||||||
Sbjct: 3260985 gacaacgagatcaagaactactggaggacgcacttcaagaag 3260944
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 311 ctcctcctcgtcctcctccatcgta 335
||||||||| |||||||||||||||
Sbjct: 2910664 ctcctcctcctcctcctccatcgta 2910688
Score = 42.1 bits (21), Expect = 0.22
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 313 cctcctcgtcctcctccatcg 333
|||||||||||||||||||||
Sbjct: 1838813 cctcctcgtcctcctccatcg 1838793
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 113 bits (57), Expect = 7e-023
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 26901556 cgctgcggcaagagctgccgcctccgctggaccaactacctccgccccgacatccgccgc 26901497
Query: 121 ggcaacttc 129
|||||||||
Sbjct: 26901496 ggcaacttc 26901488
Score = 69.9 bits (35), Expect = 1e-009
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
|||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 26901213 gacaacgagatcaagaactactggaacacgcacatcaagaagaagct 26901167
Score = 56.0 bits (28), Expect = 1e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
|||||||| |||||||| |||||||||||| || |||||||| |||||
Sbjct: 23610370 gacaacgagatcaagaattactggaacaccaacgtcaagaagcagctc 23610417
Score = 56.0 bits (28), Expect = 1e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| | ||||||||| |||||| ||||| ||||||||| |||||| | || ||||
Sbjct: 16663813 cgctgccgaaagagctgctgcctccactggatgaactacctcagccccgacctcaagcgc 16663754
Query: 121 ggcaacttcacc 132
||||||||||||
Sbjct: 16663753 ggcaacttcacc 16663742
Score = 54.0 bits (27), Expect = 6e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaacttc 129
||||||||||| ||||| |||| |||||||||||| || | | || |||||||||||||
Sbjct: 26935147 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 26935088
Query: 130 acc 132
|||
Sbjct: 26935087 acc 26935085
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 26934893 gacaacgagatcaagaacgtctggaacacgcacctcaagaag 26934852
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccg 104
||||||||||||| ||||| ||||| |||||||||||
Sbjct: 20018574 gcaagagctgccgactccggtggacgaactacctccg 20018610
Score = 48.1 bits (24), Expect = 0.004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccg 109
||||||||||| || || ||||||||||||||||| ||||
Sbjct: 20527206 aagagctgccggctgcggtggaccaactacctccggcccg 20527167
Score = 46.1 bits (23), Expect = 0.014
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 59 tgcgctgcagcaagagctgccgcctccgctggaccaactacct 101
|||| ||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 22834720 tgcgttgcggcaagagctgccggctccggtggatcaactacct 22834678
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 22834013 gacaacgagatcaagaacgtgtggcacacccacctcaagaag 22833972
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| |||||||||||||||| || ||| ||||||||
Sbjct: 22405084 gacaacgagatcaagaactactggaggacgcacttcaagaag 22405043
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 311 ctcctcctcgtcctcctccatcgta 335
||||||||| |||||||||||||||
Sbjct: 22054763 ctcctcctcctcctcctccatcgta 22054787
Score = 42.1 bits (21), Expect = 0.22
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 313 cctcctcgtcctcctccatcg 333
|||||||||||||||||||||
Sbjct: 20982912 cctcctcgtcctcctccatcg 20982892
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01,
complete sequence
Length = 143157
Score = 113 bits (57), Expect = 7e-023
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 9900 cgctgcggcaagagctgccgcctccgctggaccaactacctccgccccgacatccgccgc 9841
Query: 121 ggcaacttc 129
|||||||||
Sbjct: 9840 ggcaacttc 9832
Score = 69.9 bits (35), Expect = 1e-009
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
|||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 9557 gacaacgagatcaagaactactggaacacgcacatcaagaagaagct 9511
Score = 54.0 bits (27), Expect = 6e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaacttc 129
||||||||||| ||||| |||| |||||||||||| || | | || |||||||||||||
Sbjct: 43178 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 43119
Query: 130 acc 132
|||
Sbjct: 43118 acc 43116
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 42924 gacaacgagatcaagaacgtctggaacacgcacctcaagaag 42883
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
complete sequence
Length = 179644
Score = 113 bits (57), Expect = 7e-023
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 106970 cgctgcggcaagagctgccgcctccgctggaccaactacctccgccccgacatccgccgc 106911
Query: 121 ggcaacttc 129
|||||||||
Sbjct: 106910 ggcaacttc 106902
Score = 69.9 bits (35), Expect = 1e-009
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
|||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 106627 gacaacgagatcaagaactactggaacacgcacatcaagaagaagct 106581
Score = 54.0 bits (27), Expect = 6e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaacttc 129
||||||||||| ||||| |||| |||||||||||| || | | || |||||||||||||
Sbjct: 140248 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 140189
Query: 130 acc 132
|||
Sbjct: 140188 acc 140186
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 139994 gacaacgagatcaagaacgtctggaacacgcacctcaagaag 139953
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 113 bits (57), Expect = 7e-023
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 29970218 cgctgcggcaagagctgccgcctccgctggaccaactacctccgccccgacatccgccgc 29970159
Query: 121 ggcaacttc 129
|||||||||
Sbjct: 29970158 ggcaacttc 29970150
Score = 69.9 bits (35), Expect = 1e-009
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
|||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 29969875 gacaacgagatcaagaactactggaacacgcacatcaagaagaagct 29969829
Score = 61.9 bits (31), Expect = 2e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 58 atgcgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
||||| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 19169992 atgcgttgcagcaagagctgccggctccggtggacgaactacctccg 19170038
Score = 60.0 bits (30), Expect = 1e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 23000294 gacaacgagatcaagaactactggaacacgcacctaaagaag 23000335
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacac 50
|||||||||||||||||| | |||||||||||| ||||||| | ||||||
Sbjct: 19169846 tacatccaggagcacggcgccggcaactggcgcgccgtgccgaccaacac 19169895
Score = 56.0 bits (28), Expect = 1e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
|||||||| |||||||| |||||||||||| || |||||||| |||||
Sbjct: 26634240 gacaacgagatcaagaattactggaacaccaacgtcaagaagcagctc 26634287
Score = 56.0 bits (28), Expect = 1e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgc 120
|||||| | ||||||||| |||||| ||||| ||||||||| |||||| | || ||||
Sbjct: 19617767 cgctgccgaaagagctgctgcctccactggatgaactacctcagccccgacctcaagcgc 19617708
Query: 121 ggcaacttcacc 132
||||||||||||
Sbjct: 19617707 ggcaacttcacc 19617696
Score = 54.0 bits (27), Expect = 6e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaacttc 129
||||||||||| ||||| |||| |||||||||||| || | | || |||||||||||||
Sbjct: 30003496 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 30003437
Query: 130 acc 132
|||
Sbjct: 30003436 acc 30003434
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 30003242 gacaacgagatcaagaacgtctggaacacgcacctcaagaag 30003201
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccg 104
||||||||||||| ||||| ||||| |||||||||||
Sbjct: 22999233 gcaagagctgccgactccggtggacgaactacctccg 22999269
Score = 48.1 bits (24), Expect = 0.004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 70 aagagctgccgcctccgctggaccaactacctccgccccg 109
||||||||||| || || ||||||||||||||||| ||||
Sbjct: 23487045 aagagctgccggctgcggtggaccaactacctccggcccg 23487006
Score = 46.1 bits (23), Expect = 0.014
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 59 tgcgctgcagcaagagctgccgcctccgctggaccaactacct 101
|||| ||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 25817988 tgcgttgcggcaagagctgccggctccggtggatcaactacct 25817946
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 25817281 gacaacgagatcaagaacgtgtggcacacccacctcaagaag 25817240
Score = 44.1 bits (22), Expect = 0.057
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaag 263
|||||||| |||||||||||||||| || ||| ||||||||
Sbjct: 25379372 gacaacgagatcaagaactactggaggacgcacttcaagaag 25379331
Score = 42.1 bits (21), Expect = 0.22
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 311 ctcctcctcgtcctcctccatcgta 335
||||||||| |||||||||||||||
Sbjct: 25035124 ctcctcctcctcctcctccatcgta 25035148
Score = 42.1 bits (21), Expect = 0.22
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 313 cctcctcgtcctcctccatcg 333
|||||||||||||||||||||
Sbjct: 23955484 cctcctcgtcctcctccatcg 23955464
>gb|CB669882.1|CB669882 OSJNEe02K23.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02K23 3', mRNA sequence
Length = 716
Score = 111 bits (56), Expect = 3e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||||||||||||| | |||||||||||| ||||||| | |||||| || || |||
Sbjct: 347 tacatccaggagcacggcgccggcaactggcgcgccgtgccgaccaacaccgggctgatg 406
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
|| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 407 cgttgcagcaagagctgccggctccggtggacgaactacctccg 450
>gb|CV152463.1|CV152463 LS331-S.SEQ Cold stressed rice cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 646
Score = 111 bits (56), Expect = 3e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||||||||||||| | |||||||||||| ||||||| | |||||| || || |||
Sbjct: 211 tacatccaggagcacggcgccggcaactggcgcgccgtgccgaccaacaccgggctgatg 270
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
|| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 271 cgttgcagcaagagctgccggctccggtggacgaactacctccg 314
>dbj|AK072361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063A05, full
insert sequence
Length = 2407
Score = 111 bits (56), Expect = 3e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||||||||||||| | |||||||||||| ||||||| | |||||| || || |||
Sbjct: 383 tacatccaggagcacggcgccggcaactggcgcgccgtgccgaccaacaccgggctgatg 442
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
|| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 443 cgttgcagcaagagctgccggctccggtggacgaactacctccg 486
>ref|XM_472292.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 360
Score = 111 bits (56), Expect = 3e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||||||||||||| | |||||||||||| ||||||| | |||||| || || |||
Sbjct: 83 tacatccaggagcacggcgccggcaactggcgcgccgtgccgaccaacaccgggctgatg 142
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
|| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 143 cgttgcagcaagagctgccggctccggtggacgaactacctccg 186
>gb|CA753778.1|CA753778 BR040002000_PLATE_B03_18_027.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040002000_PLATE_B03_18_027.ab1 similar to (AF474137)
typical P-type R2R3 Myb protein [Oryza sativa] [Oryza
sativa (japonica cultivar-group)], mRNA sequence
Length = 612
Score = 105 bits (53), Expect = 2e-020
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||||||||||||| | ||| |||||||| ||||||| | |||||| || || |||
Sbjct: 346 tacatccaggagcacggcgccggcnactggcgcgccgtgccgaccaacaccgggctgatg 405
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
|| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 406 cgttgcagcaagagctgccggctccggtggacgaactacctccg 449
>gb|CB676187.1|CB676187 OSJNEe12E23.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe12E23 5', mRNA sequence
Length = 707
Score = 103 bits (52), Expect = 7e-020
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||||||||||||| | |||||||||||| ||||||| | |||||| || | |||
Sbjct: 380 tacatccaggagcacggctccggcaactggcgcgccgtgccgaccaacaccggggtgatg 439
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
|| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 440 cgttgcagcaagagctgccggctccggtggacgaactacctccg 483
>dbj|AK066025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044E03, full
insert sequence
Length = 2327
Score = 103 bits (52), Expect = 7e-020
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcccatcaacacgggcctcatg 60
|||||||||||||||||| | |||||||||||| ||||||| | |||||| || | |||
Sbjct: 417 tacatccaggagcacggctccggcaactggcgcgccgtgccgaccaacaccggggtgatg 476
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccg 104
|| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 477 cgttgcagcaagagctgccggctccggtggacgaactacctccg 520
>gb|AF474137.1| Oryza sativa typical P-type R2R3 Myb protein gene, partial cds
Length = 1271
Score = 101 bits (51), Expect = 3e-019
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctcaagaagcagcag 281
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 313 gacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcag 254
Query: 282 gcc 284
|||
Sbjct: 253 gcc 251
Score = 58.0 bits (29), Expect = 4e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcc 41
|||||||||||||||||| | |||||||||||| |||||||
Sbjct: 700 tacatccaggagcacggcgccggcaactggcgcgccgtgcc 660
Score = 58.0 bits (29), Expect = 4e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 58 atgcgctgcagcaagagctgccgcctccgctggaccaactacctc 102
||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 561 atgcgttgcagcaagagctgccggctccggtggacgaactacctc 517
>dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone P0439F12, ***
SEQUENCING IN PROGRESS ***
Length = 152695
Score = 101 bits (51), Expect = 3e-019
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctcaagaagcagcag 281
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 91523 gacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcag 91582
Query: 282 gcc 284
|||
Sbjct: 91583 gcc 91585
Score = 58.0 bits (29), Expect = 4e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 58 atgcgctgcagcaagagctgccgcctccgctggaccaactacctc 102
||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 91275 atgcgttgcagcaagagctgccggctccggtggacgaactacctc 91319
Score = 58.0 bits (29), Expect = 4e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcc 41
|||||||||||||||||| | |||||||||||| |||||||
Sbjct: 91136 tacatccaggagcacggcgccggcaactggcgcgccgtgcc 91176
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0707C02
Length = 163609
Score = 101 bits (51), Expect = 3e-019
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctcaagaagcagcag 281
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 6657 gacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcag 6716
Query: 282 gcc 284
|||
Sbjct: 6717 gcc 6719
Score = 58.0 bits (29), Expect = 4e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 58 atgcgctgcagcaagagctgccgcctccgctggaccaactacctc 102
||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 6409 atgcgttgcagcaagagctgccggctccggtggacgaactacctc 6453
Score = 58.0 bits (29), Expect = 4e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcc 41
|||||||||||||||||| | |||||||||||| |||||||
Sbjct: 6270 tacatccaggagcacggcgccggcaactggcgcgccgtgcc 6310
>gb|AACV01019979.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019979, whole
genome shotgun sequence
Length = 39088
Score = 101 bits (51), Expect = 3e-019
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctcaagaagcagcag 281
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 28361 gacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcag 28302
Query: 282 gcc 284
|||
Sbjct: 28301 gcc 28299
Score = 58.0 bits (29), Expect = 4e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcc 41
|||||||||||||||||| | |||||||||||| |||||||
Sbjct: 28748 tacatccaggagcacggcgccggcaactggcgcgccgtgcc 28708
Score = 58.0 bits (29), Expect = 4e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 58 atgcgctgcagcaagagctgccgcctccgctggaccaactacctc 102
||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 28609 atgcgttgcagcaagagctgccggctccggtggacgaactacctc 28565
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 101 bits (51), Expect = 3e-019
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctcaagaagcagcag 281
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 413071 gacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcag 413130
Query: 282 gcc 284
|||
Sbjct: 413131 gcc 413133
Score = 58.0 bits (29), Expect = 4e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 58 atgcgctgcagcaagagctgccgcctccgctggaccaactacctc 102
||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 412823 atgcgttgcagcaagagctgccggctccggtggacgaactacctc 412867
Score = 58.0 bits (29), Expect = 4e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcc 41
|||||||||||||||||| | |||||||||||| |||||||
Sbjct: 412684 tacatccaggagcacggcgccggcaactggcgcgccgtgcc 412724
Score = 56.0 bits (28), Expect = 1e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaaca 249
||||||||||||||||||||||||||||
Sbjct: 1409465 gacaacgacatcaagaactactggaaca 1409438
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 101 bits (51), Expect = 3e-019
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctcaagaagcagcag 281
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 4071697 gacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcag 4071756
Query: 282 gcc 284
|||
Sbjct: 4071757 gcc 4071759
Score = 73.8 bits (37), Expect = 6e-011
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 61 cgctgcagcaagagctgccgcctccgctggaccaactacctccgccccg 109
|||||| ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 10099720 cgctgcggcaagagctgccgcctccggtggacaaactacctccgccccg 10099672
Score = 65.9 bits (33), Expect = 2e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 68 gcaagagctgccgcctccgctggaccaactacctccgccccggcatccggcgcggcaact 127
||||||||||||||||||| |||| |||||||||||| || | | || |||||||||||
Sbjct: 10344845 gcaagagctgccgcctccggtggatcaactacctccggcctgacctcaagcgcggcaact 10344786
Query: 128 tcacc 132
|||||
Sbjct: 10344785 tcacc 10344781
Score = 65.9 bits (33), Expect = 2e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||| ||||||||| |||||||||| ||| |||||||||||||||
Sbjct: 10096632 gacaacgagatcaagaaccactggaacacgcacatcaagaagaagctca 10096584
Score = 63.9 bits (32), Expect = 6e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 222 gacaacgacatcaagaactactggaacacccacctcaagaagaagctc 269
|||||||| ||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 3369474 gacaacgagatcaagaaccactggaacacgcacatcaagaagaagctc 3369521
Score = 58.0 bits (29), Expect = 4e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
||||| |||||||| |||||||||||||||||||| ||| ||| || ||||||
Sbjct: 10344542 agaacggacaacgagatcaagaactactggaacacgcacatcaggaggaagct 10344490
Score = 58.0 bits (29), Expect = 4e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 58 atgcgctgcagcaagagctgccgcctccgctggaccaactacctc 102
||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 4071449 atgcgttgcagcaagagctgccggctccggtggacgaactacctc 4071493
Score = 58.0 bits (29), Expect = 4e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 tacatccaggagcacggcccgggcaactggcgctccgtgcc 41
|||||||||||||||||| | |||||||||||| |||||||
Sbjct: 4071310 tacatccaggagcacggcgccggcaactggcgcgccgtgcc 4071350
Score = 46.1 bits (23), Expect = 0.014
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 aagagctgccgcctccgctggaccaactacctccg 104
||||||||||| ||||| ||||| |||||||||||
Sbjct: 3369248 aagagctgccggctccggtggacgaactacctccg 3369282
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 632,216
Number of Sequences: 438736
Number of extensions: 632216
Number of successful extensions: 24234
Number of sequences better than 0.5: 520
Number of HSP's better than 0.5 without gapping: 630
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16254
Number of HSP's gapped (non-prelim): 7867
length of query: 404
length of database: 2,800,419,916
effective HSP length: 20
effective length of query: 384
effective length of database: 2,791,645,196
effective search space: 1071991755264
effective search space used: 1071991755264
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)