BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8635730.2.1
(1031 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_191815.1| Oryza sativa (japonica cultivar-group), p... 280 1e-072
gb|AACV01002252.1| Oryza sativa (japonica cultivar-group) c... 145 5e-032
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 145 5e-032
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 145 5e-032
dbj|AP003292.2| Oryza sativa (japonica cultivar-group) geno... 145 5e-032
dbj|AP003229.3| Oryza sativa (japonica cultivar-group) geno... 145 5e-032
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 145 5e-032
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 145 5e-032
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 145 5e-032
gb|CV728451.1|CV728451 COLD--01-H09.b1 Cold treated rice le... 107 1e-020
dbj|AK108452.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-020
ref|XM_475870.1| Oryza sativa (japonica cultivar-group), p... 107 1e-020
ref|NM_192085.1| Oryza sativa (japonica cultivar-group), p... 100 3e-018
gb|AC093956.2| Oryza sativa (japonica cultivar-group) chrom... 98 1e-017
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 98 1e-017
gb|AACV01012680.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 98 1e-017
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 98 1e-017
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 98 1e-017
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 98 1e-017
dbj|AP005686.3| Oryza sativa (japonica cultivar-group) geno... 86 4e-014
dbj|AP005747.3| Oryza sativa (japonica cultivar-group) geno... 86 4e-014
gb|AACV01020037.1| Oryza sativa (japonica cultivar-group) c... 86 4e-014
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 86 4e-014
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 86 4e-014
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 86 4e-014
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 86 4e-014
gb|AACV01002127.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
dbj|AP003347.3| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
gb|C72014.1|C72014 C72014 Rice panicle at flowering stage O... 80 3e-012
gb|CB682826.1|CB682826 OSJNEf10I12.f OSJNEf Oryza sativa (j... 80 3e-012
gb|AC090973.1|AC090973 Oryza sativa (japonica cultivar-grou... 80 3e-012
gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein... 80 3e-012
dbj|AK109125.1| Oryza sativa (japonica cultivar-group) cDNA... 80 3e-012
gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone... 80 3e-012
gb|AACV01000343.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
dbj|AP002743.1| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
dbj|AP002746.2| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
ref|NM_189671.1| Oryza sativa (japonica cultivar-group), p... 80 3e-012
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 80 3e-012
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|CA756492.1|CA756492 BR030043000_PLATE_G05_39_038.ab1 OA ... 74 2e-010
dbj|AP004057.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AACV01005549.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|AACV01006165.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
ref|XM_468166.1| Oryza sativa (japonica cultivar-group), mRNA 74 2e-010
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 74 2e-010
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbar... 72 7e-010
gb|AACV01006413.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 72 7e-010
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
dbj|AK111788.1| Oryza sativa (japonica cultivar-group) cDNA... 70 3e-009
gb|AACV01017741.1| Oryza sativa (japonica cultivar-group) c... 70 3e-009
ref|XM_480985.1| Oryza sativa (japonica cultivar-group), mRNA 70 3e-009
dbj|AP005495.3| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 70 3e-009
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC O... 68 1e-008
emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC O... 68 1e-008
ref|NT_107154.1| Oryza sativa (japonica cultivar-group) 68 1e-008
gb|AACV01013228.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
emb|AL513006.1|CNS07EFL Oryza sativa (japonica cultivar-gro... 66 4e-008
dbj|AK063027.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC O... 66 4e-008
ref|NT_107157.1| Oryza sativa (japonica cultivar-group) 66 4e-008
gb|AACV01009955.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
ref|XM_472825.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 64 2e-007
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromoso... 64 2e-007
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|CB656158.1|CB656158 OSJNEc10C21.f OSJNEc Oryza sativa (j... 62 6e-007
gb|AF474137.1| Oryza sativa typical P-type R2R3 Myb protein... 62 6e-007
dbj|AP004567.1| Oryza sativa (japonica cultivar-group) chro... 62 6e-007
dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chro... 62 6e-007
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
dbj|AP005636.2| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
gb|AACV01019979.1| Oryza sativa (japonica cultivar-group) c... 62 6e-007
ref|XM_482584.1| Oryza sativa (japonica cultivar-group), mRNA 62 6e-007
gb|CB639367.1|CB639367 OSJNEa10D24.f OSJNEa Oryza sativa (j... 60 3e-006
gb|CB649345.1|CB649345 OSJNEb13D15.f OSJNEb Oryza sativa (j... 60 3e-006
gb|CB658779.1|CB658779 OSJNEc15B08.f OSJNEc Oryza sativa (j... 60 3e-006
gb|AF474136.1| Oryza sativa typical P-type R2R3 Myb protein... 60 3e-006
dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK101674.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
gb|AY323480.1| Oryza sativa (japonica cultivar-group) putat... 60 3e-006
emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC O... 60 3e-006
gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone... 60 3e-006
gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 ... 60 3e-006
gb|AC123525.2| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 60 3e-006
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|AACV01016837.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01022281.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01023895.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|XM_470731.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|XM_479227.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 60 3e-006
dbj|AP004260.2| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP004306.3| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
emb|Y11352.1|OSMYB1308 O.sativa mRNA for myb factor, 1308 bp 60 3e-006
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AQ842943.1|AQ842943 nbxb0001G19r CUGI Rice BAC Library O... 58 1e-005
gb|AACV01010181.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_473295.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 58 1e-005
emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromoso... 58 1e-005
gb|AY873246.1|AY873246 04ET3_013_I_007_019_029C07 Oryza sat... 56 4e-005
gb|CB653197.1|CB653197 OSJNEc04A04.f OSJNEc Oryza sativa (j... 56 4e-005
gb|AF474138.1| Oryza sativa typical P-type R2R3 Myb protein... 56 4e-005
dbj|AK112018.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone... 56 4e-005
dbj|AP003912.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 ... 56 4e-005
gb|AACV01000388.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
gb|AACV01008001.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
ref|XM_483665.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 56 4e-005
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
gb|AQ287492.1|AQ287492 nbxb0030K04r CUGI Rice BAC Library O... 54 2e-004
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 54 2e-004
gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O0... 54 2e-004
gb|AACV01016563.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01021882.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01024071.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|NM_197198.1| Oryza sativa (japonica cultivar-group) put... 54 2e-004
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 54 2e-004
ref|XM_478689.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP005195.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
emb|Y11415.1|OSMYB1355 O.sativa mRNA for myb factor, 1355 bp 54 2e-004
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|AQ579141.1|AQ579141 nbxb0096I15f CUGI Rice BAC Library O... 52 6e-004
gb|C73695.1|C73695 C73695 Rice panicle (longer than 10cm) O... 52 6e-004
gb|AU082166.1|AU082166 AU082166 Rice cDNA from young root O... 52 6e-004
gb|AU183276.1|AU183276 AU183276 Rice cDNA from immature lea... 52 6e-004
gb|CA758808.1|CA758808 BR030025000_PLATE_F07_54_061.ab1 OA ... 52 6e-004
gb|CF326047.1|CF326047 JMT1--04-P11.g1 AtJMT-overexpressing... 52 6e-004
emb|AL607104.1|OSJN01012 Oryza sativa (japonica cultivar-gr... 52 6e-004
gb|AF474134.1| Oryza sativa typical P-type R2R3 Myb protein... 52 6e-004
dbj|AP003922.2| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK066834.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK099108.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK104053.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK107135.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK110844.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK111697.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone... 52 6e-004
gb|AY459337.1| Oryza sativa (japonica cultivar-group) clone... 52 6e-004
gb|AY459342.1| Oryza sativa (japonica cultivar-group) clone... 52 6e-004
gb|AC136956.4| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 ... 52 6e-004
gb|AC118288.2| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 52 6e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 52 6e-004
ref|NT_107095.1| Oryza sativa (japonica cultivar-group) chr... 52 6e-004
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AACV01000813.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01002776.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01007164.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01010177.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01010414.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01010825.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01012232.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01014797.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01022477.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01023384.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 52 6e-004
ref|NM_183669.1| Oryza sativa (japonica cultivar-group), p... 52 6e-004
ref|NM_190827.1| Oryza sativa (japonica cultivar-group), p... 52 6e-004
ref|XM_473291.1| Oryza sativa (japonica cultivar-group), p... 52 6e-004
ref|XM_475269.1| Oryza sativa (japonica cultivar-group), p... 52 6e-004
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 52 6e-004
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 52 6e-004
gb|AC130600.3| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 52 6e-004
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 52 6e-004
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 52 6e-004
dbj|AP004669.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP003297.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP003140.2| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP002883.2| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromoso... 52 6e-004
emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromoso... 52 6e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AC135794.3| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|AC134044.4| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|AQ255921.1|AQ255921 nbxb0014H01r CUGI Rice BAC Library O... 50 0.002
gb|AQ051267.1|AQ051267 nbxb0001cF08f CUGI Rice BAC Library ... 50 0.002
gb|AQ364476.2|AQ364476 nbxb0061G19f CUGI Rice BAC Library O... 50 0.002
gb|CZ555484.1|CZ555484 M0027756 AS_TRIM_TDNA_B1 Oryza sativ... 50 0.002
gb|AU082155.1|AU082155 AU082155 Rice root Oryza sativa (jap... 50 0.002
gb|CB643957.1|CB643957 OSJNEb04P04.f OSJNEb Oryza sativa (j... 50 0.002
dbj|AK108709.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK111960.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AC134230.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbar... 50 0.002
dbj|AP005319.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP004097.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AACV01004906.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01005346.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01006480.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01010415.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01016862.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01018749.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NM_193128.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|XM_466748.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|XM_467636.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
dbj|AP004334.2| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP003752.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP004376.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AU081563.1|AU081563 AU081563 Rice panicle shorter than 3... 48 0.010
gb|AU082322.1|AU082322 AU082322 Rice panicle (longer than 1... 48 0.010
gb|AU082325.1|AU082325 AU082325 Rice panicle (longer than 1... 48 0.010
gb|AU173093.1|AU173093 AU173093 Rice root Oryza sativa (jap... 48 0.010
gb|AU184006.1|AU184006 AU184006 Rice root Oryza sativa (jap... 48 0.010
gb|CB679300.1|CB679300 OSJNEf02K08.f OSJNEf Oryza sativa (j... 48 0.010
gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein... 48 0.010
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 48 0.010
dbj|AK104408.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK104457.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK111966.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK112056.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone... 48 0.010
emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC O... 48 0.010
gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 ... 48 0.010
gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbar... 48 0.010
dbj|AP005644.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP006174.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 48 0.010
dbj|AP005527.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP005619.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01004794.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01006437.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01006741.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01006769.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01013461.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01020458.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01025049.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 48 0.010
ref|NM_192243.1| Oryza sativa (japonica cultivar-group), p... 48 0.010
ref|XM_466424.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_466825.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_470783.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_472754.1| Oryza sativa (japonica cultivar-group), p... 48 0.010
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 48 0.010
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 48 0.010
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 48 0.010
gb|AU082180.1|AU082180 AU082180 Rice shoot Oryza sativa (ja... 46 0.038
dbj|AP002912.2| Oryza sativa (japonica cultivar-group) geno... 46 0.038
dbj|AK109904.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.038
gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone... 46 0.038
dbj|AP004090.3| Oryza sativa (japonica cultivar-group) geno... 46 0.038
dbj|AP002871.2| Oryza sativa (japonica cultivar-group) geno... 46 0.038
dbj|AP002873.2| Oryza sativa (japonica cultivar-group) geno... 46 0.038
gb|AACV01000256.1| Oryza sativa (japonica cultivar-group) c... 46 0.038
gb|AACV01000840.1| Oryza sativa (japonica cultivar-group) c... 46 0.038
gb|AACV01001493.1| Oryza sativa (japonica cultivar-group) c... 46 0.038
gb|AACV01003205.1| Oryza sativa (japonica cultivar-group) c... 46 0.038
gb|AACV01021543.1| Oryza sativa (japonica cultivar-group) c... 46 0.038
dbj|AP003339.4| Oryza sativa (japonica cultivar-group) geno... 46 0.038
ref|NM_189302.1| Oryza sativa (japonica cultivar-group), p... 46 0.038
ref|NM_193333.1| Oryza sativa (japonica cultivar-group), p... 46 0.038
ref|NM_196480.1| Oryza sativa (japonica cultivar-group) unk... 46 0.038
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 46 0.038
ref|XM_462803.1| Oryza sativa (japonica cultivar-group), p... 46 0.038
ref|XM_463865.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.038
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 46 0.038
dbj|AP004867.2| Oryza sativa (japonica cultivar-group) geno... 46 0.038
ref|XM_550262.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.038
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 46 0.038
dbj|AP004231.3| Oryza sativa (japonica cultivar-group) geno... 46 0.038
dbj|AP004232.4| Oryza sativa (japonica cultivar-group) geno... 46 0.038
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.038
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.038
gb|AC027660.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.038
gb|CG408359.1|CG408359 Ds49 Ds insertion lines Oryza sativa... 44 0.15
gb|AU082324.1|AU082324 AU082324 Rice panicle (longer than 1... 44 0.15
gb|C74411.2|C74411 C74411 Rice panicle shorter than 3cm Ory... 44 0.15
gb|CB676151.1|CB676151 OSJNEe12E03.f OSJNEe Oryza sativa (j... 44 0.15
gb|AU070855.2|AU070855 AU070855 Rice cDNA from young root O... 44 0.15
gb|AF474140.1| Oryza sativa typical P-type R2R3 Myb protein... 44 0.15
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 44 0.15
dbj|AK064679.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK069082.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK099283.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK106039.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK107424.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK107546.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK108259.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK109620.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK111740.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK111807.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK121023.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone... 44 0.15
gb|AC122149.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbar... 44 0.15
gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 ... 44 0.15
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP004083.2| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP003980.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 ... 44 0.15
dbj|AP002860.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|AACV01000122.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01002155.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01004921.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01005439.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01005857.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01006536.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01006761.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01010086.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01018505.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01019923.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01020446.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
ref|XM_463409.1| Oryza sativa (japonica cultivar-group), p... 44 0.15
ref|XM_466772.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|XM_467854.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|XM_468625.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|XM_473120.1| Oryza sativa (japonica cultivar-group), p... 44 0.15
ref|XM_482497.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 44 0.15
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 44 0.15
ref|XM_506868.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.15
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 44 0.15
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 44 0.15
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005092.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
ref|NM_184207.2| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromoso... 44 0.15
emb|Y11351.1|OSMYB1402 O.sativa mRNA for myb factor, 1402 bp 44 0.15
>ref|NM_191815.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 921
Score = 280 bits (141), Expect = 1e-072
Identities = 192/209 (91%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 172 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 231
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 232 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 291
Query: 124 tggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactgg 183
||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 292 tggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactgg 351
Query: 184 aacaccaagctcaagaagcggtacttggc 212
|||||||||||||||||| ||||||||||
Sbjct: 352 aacaccaagctcaagaagaggtacttggc 380
>gb|AACV01002252.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002252, whole
genome shotgun sequence
Length = 28142
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 9037 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 8978
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 8977 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 8918
Query: 124 t 124
|
Sbjct: 8917 t 8917
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Minus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 8810 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 8751
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 8750 gaacaccaagctcaagaagaggtacttggc 8721
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 30191616 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 30191675
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 30191676 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 30191735
Query: 124 t 124
|
Sbjct: 30191736 t 30191736
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 30191843 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 30191902
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 30191903 gaacaccaagctcaagaagaggtacttggc 30191932
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 28324555 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 28324608
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4915421 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 4915378
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 4915648 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 4915589
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 4915588 gccttcaccgacgagga 4915572
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 28324336 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 28324388
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 38006656 ggacggacaacgagatcaagaactactggaacac 38006689
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || |||||| | |||||||||||||| || ||| || ||||
Sbjct: 38006423 tgcggcaagagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggc 38006482
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 38006483 aacttcaccgacga 38006496
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgccc 47
||||||||||| || || ||||||||||||||||||||
Sbjct: 10931023 aagagctgccgcctccggtggctcaactacctccgccc 10931060
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactgga 184
|||||||| ||||| |||||||| |||||||||||||||
Sbjct: 25667056 ctccccggccggaccgacaacgagatcaagaactactgga 25667095
Score = 46.1 bits (23), Expect = 0.038
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaac 186
||||| |||||||||||||| ||||||||| |||||||
Sbjct: 20316494 cccggccggacggacaacgagatcaagaacttctggaac 20316456
Score = 46.1 bits (23), Expect = 0.038
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaac 186
||||| ||||||||||| || |||||||||||||||||
Sbjct: 11351816 cccgggcggacggacaatgagatcaagaactactggaac 11351854
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaa 185
||||||||||||| ||||||||||||||||
Sbjct: 3518076 ggacggacaacgagatcaagaactactggaa 3518046
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaac 186
||||||||||| |||||||||||||||||
Sbjct: 28870908 acggacaacgagatcaagaactactggaac 28870937
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactgga 184
||||||||||||| |||||||||||||||
Sbjct: 1547149 ggacggacaacgagatcaagaactactgga 1547120
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 4638999 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 4639058
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 4639059 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 4639118
Query: 124 t 124
|
Sbjct: 4639119 t 4639119
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 4639226 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 4639285
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 4639286 gaacaccaagctcaagaagaggtacttggc 4639315
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 2771938 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 2771991
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 2771719 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 2771771
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 12454039 ggacggacaacgagatcaagaactactggaacac 12454072
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || |||||| | |||||||||||||| || ||| || ||||
Sbjct: 12453806 tgcggcaagagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggc 12453865
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 12453866 aacttcaccgacga 12453879
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactgga 184
|||||||| ||||| |||||||| |||||||||||||||
Sbjct: 114439 ctccccggccggaccgacaacgagatcaagaactactgga 114478
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaac 186
||||||||||| |||||||||||||||||
Sbjct: 3318291 acggacaacgagatcaagaactactggaac 3318320
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0690B02
Length = 153116
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 106936 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 106995
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 106996 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 107055
Query: 124 t 124
|
Sbjct: 107056 t 107056
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 107163 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 107222
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 107223 gaacaccaagctcaagaagaggtacttggc 107252
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0022F10
Length = 150498
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 15768 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 15827
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 15828 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 15887
Query: 124 t 124
|
Sbjct: 15888 t 15888
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 15995 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 16054
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 16055 gaacaccaagctcaagaagaggtacttggc 16084
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 4580262 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 4580321
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 4580322 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 4580381
Query: 124 t 124
|
Sbjct: 4580382 t 4580382
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 4580489 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 4580548
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 4580549 gaacaccaagctcaagaagaggtacttggc 4580578
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 2705077 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 2705130
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 2704859 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 2704911
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 12183411 ggacggacaacgagatcaagaactactggaacac 12183444
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || |||||| | |||||||||||||| || ||| || ||||
Sbjct: 12183178 tgcggcaagagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggc 12183237
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 12183238 aacttcaccgacga 12183251
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactgga 184
|||||||| ||||| |||||||| |||||||||||||||
Sbjct: 134116 ctccccggccggaccgacaacgagatcaagaactactgga 134155
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaac 186
||||||||||| |||||||||||||||||
Sbjct: 3257862 acggacaacgagatcaagaactactggaac 3257891
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 29781983 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 29782042
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 29782043 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 29782102
Query: 124 t 124
|
Sbjct: 29782103 t 29782103
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 29782210 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 29782269
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 29782270 gaacaccaagctcaagaagaggtacttggc 29782299
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 27906798 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 27906851
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4923918 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 4923875
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 4924145 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 4924086
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 4924085 gccttcaccgacgagga 4924069
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 27906580 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 27906632
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgccc 47
||||| ||||||||||| || |||||| ||||||||||||||||
Sbjct: 5672575 tgcggcaagagctgccgcctccgctggatcaactacctccgccc 5672532
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 37385132 ggacggacaacgagatcaagaactactggaacac 37385165
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || |||||| | |||||||||||||| || ||| || ||||
Sbjct: 37384899 tgcggcaagagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggc 37384958
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 37384959 aacttcaccgacga 37384972
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgccc 47
||||||||||| || || ||||||||||||||||||||
Sbjct: 11127114 aagagctgccgcctccggtggctcaactacctccgccc 11127151
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 5672348 ggacggacaacgagatcaagaactactggaacac 5672315
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactgga 184
|||||||| ||||| |||||||| |||||||||||||||
Sbjct: 25335837 ctccccggccggaccgacaacgagatcaagaactactgga 25335876
Score = 46.1 bits (23), Expect = 0.038
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaac 186
||||| |||||||||||||| ||||||||| |||||||
Sbjct: 19900358 cccggccggacggacaacgagatcaagaacttctggaac 19900320
Score = 46.1 bits (23), Expect = 0.038
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaac 186
||||| ||||||||||| || |||||||||||||||||
Sbjct: 11498396 cccgggcggacggacaatgagatcaagaactactggaac 11498434
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaa 185
||||||||||||| ||||||||||||||||
Sbjct: 3582485 ggacggacaacgagatcaagaactactggaa 3582455
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaac 186
||||||||||| |||||||||||||||||
Sbjct: 28459583 acggacaacgagatcaagaactactggaac 28459612
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactgga 184
||||||||||||| |||||||||||||||
Sbjct: 1573905 ggacggacaacgagatcaagaactactgga 1573876
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 145 bits (73), Expect = 5e-032
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || |||||||||||||||||||||| | |||||||||||
Sbjct: 30110946 tgcggcaagagctgccgcctccggtggctcaactacctccgcccggcgatccggcacggc 30111005
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
||||||||||||||||| |||| ||||||| |||| ||||||||||| || |||||||||
Sbjct: 30111006 ggcttcaccgacgaggaggacaacctcatcctgtcgctctacggcgaaatgggaagcaag 30111065
Query: 124 t 124
|
Sbjct: 30111066 t 30111066
Score = 139 bits (70), Expect = 3e-030
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 123 gtggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactg 182
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 30111173 gtggtcggtgatcgcgtccaagctccccggccggacggacaacgacgtcaagaactactg 30111232
Query: 183 gaacaccaagctcaagaagcggtacttggc 212
||||||||||||||||||| ||||||||||
Sbjct: 30111233 gaacaccaagctcaagaagaggtacttggc 30111262
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 28243885 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 28243938
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4917619 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 4917576
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 4917846 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 4917787
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 4917786 gccttcaccgacgagga 4917770
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 28243666 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 28243718
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 37925986 ggacggacaacgagatcaagaactactggaacac 37926019
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || |||||| | |||||||||||||| || ||| || ||||
Sbjct: 37925753 tgcggcaagagctgccgcctccgctggatgaactacctccgccccgacctcaagcgcggc 37925812
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 37925813 aacttcaccgacga 37925826
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgccc 47
||||||||||| || || ||||||||||||||||||||
Sbjct: 10933241 aagagctgccgcctccggtggctcaactacctccgccc 10933278
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactgga 184
|||||||| ||||| |||||||| |||||||||||||||
Sbjct: 25586836 ctccccggccggaccgacaacgagatcaagaactactgga 25586875
Score = 46.1 bits (23), Expect = 0.038
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaac 186
||||| |||||||||||||| ||||||||| |||||||
Sbjct: 20237777 cccggccggacggacaacgagatcaagaacttctggaac 20237739
Score = 46.1 bits (23), Expect = 0.038
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaac 186
||||| ||||||||||| || |||||||||||||||||
Sbjct: 11354034 cccgggcggacggacaatgagatcaagaactactggaac 11354072
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaa 185
||||||||||||| ||||||||||||||||
Sbjct: 3520274 ggacggacaacgagatcaagaactactggaa 3520244
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaac 186
||||||||||| |||||||||||||||||
Sbjct: 28790238 acggacaacgagatcaagaactactggaac 28790267
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactgga 184
||||||||||||| |||||||||||||||
Sbjct: 1549347 ggacggacaacgagatcaagaactactgga 1549318
>gb|CV728451.1|CV728451 COLD--01-H09.b1 Cold treated rice leaf lambda phage cDNA library
(COLD) Oryza sativa (japonica cultivar-group) cDNA clone
COLD--01-H09, mRNA sequence
Length = 467
Score = 107 bits (54), Expect = 1e-020
Identities = 162/198 (81%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||| | ||||| || |||||||
Sbjct: 269 tgcggcaagagctgcaggctccggtggctcaactacctgaggccggacatcaagcacggc 328
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
|||| |||||| |||| ||| | |||||| || |||||| | ||||||||||| |
Sbjct: 329 ggctacaccgagcaggaggaccacatcatctgctcgctctacaactcgattggaagcagg 388
Query: 124 tggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactgg 183
||||| | || ||||| | |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 389 tggtccatcatcgcgtcgaagctccccggccggactgacaacgacgtcaagaactactgg 448
Query: 184 aacaccaagctcaagaag 201
||||||||||||||||||
Sbjct: 449 aacaccaagctcaagaag 466
>dbj|AK108452.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-C10, full
insert sequence
Length = 1262
Score = 107 bits (54), Expect = 1e-020
Identities = 162/198 (81%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||| | ||||| || |||||||
Sbjct: 306 tgcggcaagagctgcaggctccggtggctcaactacctgaggccggacatcaagcacggc 365
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
|||| |||||| |||| ||| | |||||| || |||||| | ||||||||||| |
Sbjct: 366 ggctacaccgagcaggaggaccacatcatctgctcgctctacaactcgattggaagcagg 425
Query: 124 tggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactgg 183
||||| | || ||||| | |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 426 tggtccatcatcgcgtcgaagctccccggccggactgacaacgacgtcaagaactactgg 485
Query: 184 aacaccaagctcaagaag 201
||||||||||||||||||
Sbjct: 486 aacaccaagctcaagaag 503
>ref|XM_475870.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 870
Score = 107 bits (54), Expect = 1e-020
Identities = 162/198 (81%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||| | ||||| || |||||||
Sbjct: 148 tgcggcaagagctgcaggctccggtggctcaactacctgaggccggacatcaagcacggc 207
Query: 64 ggcttcaccgacgaggaagacagcctcatcttgtctctctacggcgagattggaagcaag 123
|||| |||||| |||| ||| | |||||| || |||||| | ||||||||||| |
Sbjct: 208 ggctacaccgagcaggaggaccacatcatctgctcgctctacaactcgattggaagcagg 267
Query: 124 tggtcggtgatagcgtccagactccccggacggacggacaacgacgtcaagaactactgg 183
||||| | || ||||| | |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 268 tggtccatcatcgcgtcgaagctccccggccggactgacaacgacgtcaagaactactgg 327
Query: 184 aacaccaagctcaagaag 201
||||||||||||||||||
Sbjct: 328 aacaccaagctcaagaag 345
>ref|NM_192085.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 957
Score = 99.6 bits (50), Expect = 3e-018
Identities = 143/174 (82%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgaggaagacagc 87
||||||||||||||||||||||| || ||||||||||| ||||||| |||| ||| |
Sbjct: 172 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccaggaggaccgg 231
Query: 88 ctcatcttgtctctctacggcgagattggaagcaagtggtcggtgatagcgtccagactc 147
|||||| || |||||| | || ||||||| |||||| | || ||||| | ||
Sbjct: 232 atcatctgttccctctacaactccatcggaagcaggtggtccatcatcgcgtcgaagctg 291
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 292 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 345
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10,
complete sequence
Length = 116469
Score = 97.6 bits (49), Expect = 1e-017
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17734 ctccccggccggactgacaacgacgtcaagaactactggaacaccaagctcaagaag 17678
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
complete sequence
Length = 191765
Score = 97.6 bits (49), Expect = 1e-017
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180245 ctccccggccggactgacaacgacgtcaagaactactggaacaccaagctcaagaag 180189
>gb|AACV01012680.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012680, whole
genome shotgun sequence
Length = 22202
Score = 97.6 bits (49), Expect = 1e-017
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18332 ctccccggccggactgacaacgacgtcaagaactactggaacaccaagctcaagaag 18388
>ref|NT_107220.1| Oryza sativa (japonica cultivar-group)
Length = 436435
Score = 97.6 bits (49), Expect = 1e-017
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337700 ctccccggccggactgacaacgacgtcaagaactactggaacaccaagctcaagaag 337644
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 97.6 bits (49), Expect = 1e-017
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9733774 ctccccggccggactgacaacgacgtcaagaactactggaacaccaagctcaagaag 9733718
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 3311491 ggacggacaacgagatcaagaactactggaacac 3311458
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||| | |||||||||||||| || ||| || ||||
Sbjct: 3311742 tgcggcaagagctgccgcctccggtggatgaactacctccgccccgacctcaagcgcggc 3311683
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 3311682 aacttcaccgacga 3311669
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 97.6 bits (49), Expect = 1e-017
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27034087 ctccccggccggactgacaacgacgtcaagaactactggaacaccaagctcaagaag 27034031
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 20611804 ggacggacaacgagatcaagaactactggaacac 20611771
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgccc 47
|||||||||||||| || ||||| ||||||||||||||
Sbjct: 1849336 aagagctgccgtctccggtggctgaactacctccgccc 1849299
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||| | |||||||||||||| || ||| || ||||
Sbjct: 20612055 tgcggcaagagctgccgcctccggtggatgaactacctccgccccgacctcaagcgcggc 20611996
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 20611995 aacttcaccgacga 20611982
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 97.6 bits (49), Expect = 1e-017
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27305277 ctccccggccggactgacaacgacgtcaagaactactggaacaccaagctcaagaag 27305221
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 20955806 ggacggacaacgagatcaagaactactggaacac 20955773
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgccc 47
|||||||||||||| || ||||| ||||||||||||||
Sbjct: 1848331 aagagctgccgtctccggtggctgaactacctccgccc 1848294
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||| | |||||||||||||| || ||| || ||||
Sbjct: 20956057 tgcggcaagagctgccgcctccggtggatgaactacctccgccccgacctcaagcgcggc 20955998
Query: 64 ggcttcaccgacga 77
||||||||||||
Sbjct: 20955997 aacttcaccgacga 20955984
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OSJNBa0016E03
Length = 152934
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||||||||||||||||| ||| | |||||||||||
Sbjct: 109234 tgcggcaagagctgccggctgcggtggctcaactacctccggccgaacatccggcacggc 109175
Query: 64 ggcttcaccgacgaggaagacagcctcatct 94
||||||||||| || || ||| |||||||||
Sbjct: 109174 ggcttcaccgaggacgaggaccgcctcatct 109144
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
|||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 108974 ggacggacaacgacatcaagaactactggaacagcaagctcaag 108931
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OSJNBa0039E17
Length = 144126
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||||||||||||||||| ||| | |||||||||||
Sbjct: 3113 tgcggcaagagctgccggctgcggtggctcaactacctccggccgaacatccggcacggc 3054
Query: 64 ggcttcaccgacgaggaagacagcctcatct 94
||||||||||| || || ||| |||||||||
Sbjct: 3053 ggcttcaccgaggacgaggaccgcctcatct 3023
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
|||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 2853 ggacggacaacgacatcaagaactactggaacagcaagctcaag 2810
>gb|AACV01020037.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020037, whole
genome shotgun sequence
Length = 17879
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||||||||||||||||| ||| | |||||||||||
Sbjct: 17726 tgcggcaagagctgccggctgcggtggctcaactacctccggccgaacatccggcacggc 17785
Query: 64 ggcttcaccgacgaggaagacagcctcatct 94
||||||||||| || || ||| |||||||||
Sbjct: 17786 ggcttcaccgaggacgaggaccgcctcatct 17816
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||||||||||||||||| ||| | |||||||||||
Sbjct: 1409730 tgcggcaagagctgccggctgcggtggctcaactacctccggccgaacatccggcacggc 1409671
Query: 64 ggcttcaccgacgaggaagacagcctcatct 94
||||||||||| || || ||| |||||||||
Sbjct: 1409670 ggcttcaccgaggacgaggaccgcctcatct 1409640
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
|||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 1409470 ggacggacaacgacatcaagaactactggaacagcaagctcaag 1409427
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||||| ||||||||||||||||||| | |||||||||
Sbjct: 413066 ggacggacaacgacatcaagaactactggaacacgcacctcaagaag 413112
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||||||||||||||||| ||| | |||||||||||
Sbjct: 5020972 tgcggcaagagctgccggctgcggtggctcaactacctccggccgaacatccggcacggc 5020913
Query: 64 ggcttcaccgacgaggaagacagcctcatct 94
||||||||||| || || ||| |||||||||
Sbjct: 5020912 ggcttcaccgaggacgaggaccgcctcatct 5020882
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||||| ||||||||||||||||||| | |||||||||
Sbjct: 4071692 ggacggacaacgacatcaagaactactggaacacgcacctcaagaag 4071738
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 157 acggacaacgacgtcaagaactactggaacac 188
||||||||||| |||||||||||||||||||
Sbjct: 10344539 acggacaacgagatcaagaactactggaacac 10344508
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||| ||||||||||
Sbjct: 10096637 ggacggacaacgagatcaagaaccactggaacac 10096604
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||| ||||||||||
Sbjct: 3369469 ggacggacaacgagatcaagaaccactggaacac 3369502
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||||||||||||||||| ||| | |||||||||||
Sbjct: 14494783 tgcggcaagagctgccggctgcggtggctcaactacctccggccgaacatccggcacggc 14494724
Query: 64 ggcttcaccgacgaggaagacagcctcatct 94
||||||||||| || || ||| |||||||||
Sbjct: 14494723 ggcttcaccgaggacgaggaccgcctcatct 14494693
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||||| ||||||||||||||||||| | |||||||||
Sbjct: 13545503 ggacggacaacgacatcaagaactactggaacacgcacctcaagaag 13545549
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 157 acggacaacgacgtcaagaactactggaacac 188
||||||||||| |||||||||||||||||||
Sbjct: 19818350 acggacaacgagatcaagaactactggaacac 19818319
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||| ||||||||||
Sbjct: 19570448 ggacggacaacgagatcaagaaccactggaacac 19570415
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||| ||||||||||
Sbjct: 12843280 ggacggacaacgagatcaagaaccactggaacac 12843313
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||||| || || ||||||||||||||||| ||| | |||||||||||
Sbjct: 15717927 tgcggcaagagctgccggctgcggtggctcaactacctccggccgaacatccggcacggc 15717868
Query: 64 ggcttcaccgacgaggaagacagcctcatct 94
||||||||||| || || ||| |||||||||
Sbjct: 15717867 ggcttcaccgaggacgaggaccgcctcatct 15717837
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
|||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 15717667 ggacggacaacgacatcaagaactactggaacagcaagctcaag 15717624
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||||| ||||||||||||||||||| | |||||||||
Sbjct: 14721263 ggacggacaacgacatcaagaactactggaacacgcacctcaagaag 14721309
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 157 acggacaacgacgtcaagaactactggaacac 188
||||||||||| |||||||||||||||||||
Sbjct: 20888796 acggacaacgagatcaagaactactggaacac 20888765
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||| ||||||||||
Sbjct: 20615005 ggacggacaacgagatcaagaaccactggaacac 20614972
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||| ||||||||||
Sbjct: 13975394 ggacggacaacgagatcaagaaccactggaacac 13975427
>gb|AACV01002127.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002127, whole
genome shotgun sequence
Length = 48402
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 23808 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 23861
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 23590 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 23642
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0445E10
Length = 145912
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 127879 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 127932
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 127660 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 127712
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0478H03
Length = 167560
Score = 83.8 bits (42), Expect = 2e-013
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 78392 cccggccggacggacaacgacgtcaagaattactggaataccaagctcaagaag 78445
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 28 tggctcaactacctccgcccggagctccggcacggcggcttcaccgacgagga 80
||||||||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 78173 tggctcaactacctccgcccggacatcaagcacggcggctacaccgaccagga 78225
>gb|C72014.1|C72014 C72014 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0784_1A, mRNA sequence
Length = 369
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 163 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 206
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 13 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 72
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 73 gccttcaccgacgagga 89
>gb|CB682826.1|CB682826 OSJNEf10I12.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10I12 5', mRNA sequence
Length = 710
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 407 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 450
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 256 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 315
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 316 gccttcaccgacgagga 332
>gb|AC090973.1|AC090973 Oryza sativa (japonica cultivar-group) chromosome 1 clone
OSJNBa0026L17, *** SEQUENCING IN PROGRESS ***, 2 ordered
pieces
Length = 163118
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 36662 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 36619
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 36889 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 36830
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 36829 gccttcaccgacgagga 36813
>gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein gene, complete cds
Length = 1507
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 533 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 490
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 760 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 701
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 700 gccttcaccgacgagga 684
>dbj|AK109125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D04, full
insert sequence
Length = 1089
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 430 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 473
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 279 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 338
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 339 gccttcaccgacgagga 355
>gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone CL005170.5 R2R3-MYB gene
region
Length = 9432
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1765 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 1722
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggcggcttc 69
||||||||| | || || |||||||||||||||||||| || |||| || |||| ||||
Sbjct: 1986 aagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggcgccttc 1927
Query: 70 accgacgagga 80
|||||||||||
Sbjct: 1926 accgacgagga 1916
>gb|AACV01000343.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000343, whole
genome shotgun sequence
Length = 16874
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9284 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 9241
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 9511 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 9452
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 9451 gccttcaccgacgagga 9435
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0710E05
Length = 179714
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 162268 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 162225
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 162495 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 162436
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 162435 gccttcaccgacgagga 162419
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0671B11
Length = 168372
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 18072 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 18029
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 18299 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 18240
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 18239 gccttcaccgacgagga 18223
>ref|NM_189671.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 795
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 299 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 342
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 148 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 207
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 208 gccttcaccgacgagga 224
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4915261 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 4915218
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 4915488 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 4915429
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 4915428 gccttcaccgacgagga 4915412
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaa 185
||||||||||||| ||||||||||||||||
Sbjct: 3518076 ggacggacaacgagatcaagaactactggaa 3518046
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactgga 184
||||||||||||| |||||||||||||||
Sbjct: 1547149 ggacggacaacgagatcaagaactactgga 1547120
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 79.8 bits (40), Expect = 3e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagctcaag 198
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4923918 ggacggacaacgacgtcaagaaccactggaacaccaagctcaag 4923875
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgcccggagctccggcacggc 63
||||| ||||||||| | || || |||||||||||||||||||| || |||| || |||
Sbjct: 4924145 tgcggcaagagctgcaggctgcggtggctcaactacctccgccccgacatccgccatggc 4924086
Query: 64 ggcttcaccgacgagga 80
| |||||||||||||||
Sbjct: 4924085 gccttcaccgacgagga 4924069
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgccc 47
||||| ||||||||||| || |||||| ||||||||||||||||
Sbjct: 5672575 tgcggcaagagctgccgcctccgctggatcaactacctccgccc 5672532
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgccc 47
||||||||||| || || ||||||||||||||||||||
Sbjct: 11127114 aagagctgccgcctccggtggctcaactacctccgccc 11127151
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
||||||||||||| |||||||||||||||||||
Sbjct: 5672348 ggacggacaacgagatcaagaactactggaacac 5672315
Score = 46.1 bits (23), Expect = 0.038
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 148 cccggacggacggacaacgacgtcaagaactactggaac 186
||||| ||||||||||| || |||||||||||||||||
Sbjct: 11498396 cccgggcggacggacaatgagatcaagaactactggaac 11498434
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaa 185
||||||||||||| ||||||||||||||||
Sbjct: 3582485 ggacggacaacgagatcaagaactactggaa 3582455
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactgga 184
||||||||||||| |||||||||||||||
Sbjct: 1573905 ggacggacaacgagatcaagaactactgga 1573876
>gb|CA756492.1|CA756492 BR030043000_PLATE_G05_39_038.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030043000_PLATE_G05_39_038.ab1 similar to probable
transcription factor MYB36 [imported] - Arabidopsis
thaliana gi|3941448|gb|AAC83600.1| (AF062878) putative
transcription factor [Arabidopsis thaliana], mRNA
sequence
Length = 622
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 452 acggacaacgacatcaagaactactggaacaccaagctgaagaag 496
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1316_E06
Length = 110197
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 51165 acggacaacgacatcaagaactactggaacaccaagctgaagaag 51209
>gb|AACV01005549.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005549,
whole genome shotgun sequence
Length = 3675
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 667 acggacaacgacatcaagaactactggaacaccaagctgaagaag 711
>gb|AACV01006165.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006165, whole
genome shotgun sequence
Length = 20266
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 7366 acggacaacgacatcaaaaactactggaacaccaagctcaagaag 7410
>ref|XM_468166.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1692
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 895 acggacaacgacatcaagaactactggaacaccaagctgaagaag 939
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 8585545 acggacaacgacatcaagaactactggaacaccaagctgaagaag 8585589
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacacc 189
|||||||| ||||||||||||| |||||||| |||||||||||
Sbjct: 5724004 ctccccgggaggacggacaacgagatcaagaaccactggaacacc 5723960
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgccc 47
||||| ||||||||||| || || ||| ||||||||||||||||
Sbjct: 63158 tgcggcaagagctgccgcctccggtggatcaactacctccgccc 63115
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
|||| |||||||| |||||||||||||||||||
Sbjct: 6909150 ggactgacaacgagatcaagaactactggaacac 6909117
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 7196711 acggacaacgacatcaaaaactactggaacaccaagctcaagaag 7196755
Score = 71.9 bits (36), Expect = 7e-010
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacaccaagct 194
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 10416600 ggacggacaacgacgtgaagaactactggaacaccaagct 10416561
Score = 50.1 bits (25), Expect = 0.002
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 10 aagagctgccgtcttcgctggctcaactacctccgcccggagctccggc 58
||||||||||| || || ||||| |||||||||||||| || |||||||
Sbjct: 11391683 aagagctgccggctccggtggctgaactacctccgccccgacctccggc 11391635
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaac 186
||||||||||||| |||||||||||||||||
Sbjct: 10766363 ggacggacaacgagatcaagaactactggaac 10766332
Score = 44.1 bits (22), Expect = 0.15
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacct 41
||||| ||||||||||| || || ||||||||||||||
Sbjct: 12086485 tgcgggaagagctgccggctgcggtggctcaactacct 12086522
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactgga 184
||||||||||||| |||||||||||||||
Sbjct: 2320400 ggacggacaacgagatcaagaactactgga 2320371
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 157 acggacaacgacgtcaagaactactggaacaccaagctcaagaag 201
|||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 20070296 acggacaacgacatcaagaactactggaacaccaagctgaagaag 20070340
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 145 ctccccggacggacggacaacgacgtcaagaactactggaacacc 189
|||||||| ||||||||||||| |||||||| |||||||||||
Sbjct: 17056307 ctccccgggaggacggacaacgagatcaagaaccactggaacacc 17056263
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 240 gccgccgccgccaccaccagctcctcctagcgc 272
||||||||||||||||||| ||||||| |||||
Sbjct: 10739115 gccgccgccgccaccaccacctcctccaagcgc 10739147
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 4 tgcggtaagagctgccgtcttcgctggctcaactacctccgccc 47
||||| ||||||||||| || || ||| ||||||||||||||||
Sbjct: 11224524 tgcggcaagagctgccgcctccggtggatcaactacctccgccc 11224481
Score = 48.1 bits (24), Expect = 0.010
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 240 gccgccgccgccaccaccagctcctcct 267
||||||||||||||||||| ||||||||
Sbjct: 8943777 gccgccgccgccaccaccatctcctcct 8943804
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactggaacac 188
|||| |||||||| |||||||||||||||||||
Sbjct: 18307767 ggactgacaacgagatcaagaactactggaacac 18307734
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 155 ggacggacaacgacgtcaagaactactgga 184
||||||||||||| |||||||||||||||
Sbjct: 10926546 ggacggacaacgagatcaagaactactgga 10926517
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,825,866
Number of Sequences: 438736
Number of extensions: 2825866
Number of successful extensions: 36985
Number of sequences better than 0.5: 378
Number of HSP's better than 0.5 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25857
Number of HSP's gapped (non-prelim): 11058
length of query: 1031
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1010
effective length of database: 2,791,206,460
effective search space: 2819118524600
effective search space used: 2819118524600
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)