BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010573.2.1
(1223 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB648189.1|CB648189 OSJNEb11H13.f OSJNEb Oryza sativa (j... 543 e-152
gb|CB650792.1|CB650792 OSJNEb15H04.f OSJNEb Oryza sativa (j... 543 e-152
gb|CB655758.1|CB655758 OSJNEc09H12.f OSJNEc Oryza sativa (j... 543 e-152
gb|CB658953.1|CB658953 OSJNEc15H06.f OSJNEc Oryza sativa (j... 543 e-152
dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA... 543 e-152
gb|CB656073.1|CB656073 OSJNEc09P24.f OSJNEc Oryza sativa (j... 535 e-149
gb|CB652674.1|CB652674 OSJNEc02O21.f OSJNEc Oryza sativa (j... 301 5e-079
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 301 5e-079
dbj|AP003771.2| Oryza sativa (japonica cultivar-group) geno... 301 5e-079
dbj|AP005445.3| Oryza sativa (japonica cultivar-group) geno... 301 5e-079
gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) c... 301 5e-079
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 301 5e-079
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 301 5e-079
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 301 5e-079
gb|CB651562.1|CB651562 OSJNEb16J04.f OSJNEb Oryza sativa (j... 234 9e-059
gb|CB655114.1|CB655114 OSJNEc08D08.f OSJNEc Oryza sativa (j... 234 9e-059
gb|AU183876.1|AU183876 AU183876 Rice cDNA from immature lea... 228 6e-057
dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA... 228 6e-057
dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA... 228 6e-057
gb|CB671695.1|CB671695 OSJNEe05G07.f OSJNEe Oryza sativa (j... 220 1e-054
gb|CB683062.1|CB683062 OSJNEf10P16.f OSJNEf Oryza sativa (j... 220 1e-054
gb|AU222632.1|AU222632 AU222632 Rice cDNA from immature lea... 214 8e-053
gb|AU183250.1|AU183250 AU183250 Rice cDNA from immature lea... 202 3e-049
dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA... 202 3e-049
dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA... 202 3e-049
gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (j... 200 1e-048
gb|AU183242.1|AU183242 AU183242 Rice cDNA from immature lea... 190 1e-045
gb|AU097516.1|AU097516 AU097516 Rice shoot Oryza sativa (ja... 188 5e-045
gb|BP432965.1|BP432965 BP432965 Oryza sativa (japonica cult... 176 2e-041
gb|AU097514.1|AU097514 AU097514 Rice shoot Oryza sativa (ja... 161 1e-036
gb|CF325411.1|CF325411 JMT1--03-C17.g1 AtJMT-overexpressing... 159 4e-036
gb|AU225192.1|AU225192 AU225192 Oryza sativa Koshihikari pi... 157 2e-035
gb|C28350.1|C28350 C28350 Rice callus cDNA Oryza sativa (ja... 147 2e-032
gb|AU222683.1|AU222683 AU222683 Rice shoot Oryza sativa (ja... 137 2e-029
gb|C25186.1|C25186 C25186 Rice shoot Oryza sativa (japonica... 133 2e-028
gb|AU161551.1|AU161551 AU161551 Rice shoot Oryza sativa (ja... 127 2e-026
gb|AU222867.1|AU222867 AU222867 Rice shoot Oryza sativa (ja... 127 2e-026
gb|CF325257.1|CF325257 JMT1--02-L23.g1 AtJMT-overexpressing... 127 2e-026
dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA... 127 2e-026
dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA... 127 2e-026
gb|AU063923.1|AU063923 AU063923 Rice panicle at flowering s... 125 6e-026
gb|C25181.1|C25181 C25181 Rice shoot Oryza sativa (japonica... 119 4e-024
gb|AU063993.1|AU063993 AU063993 Rice panicle at flowering s... 117 1e-023
gb|D39971.1|D39971 RICS1669A Rice shoot Oryza sativa (japon... 115 6e-023
gb|D40760.1|D40760 RICS2904A Rice shoot Oryza sativa (japon... 115 6e-023
gb|AU063995.2|AU063995 AU063995 Rice panicle at flowering s... 115 6e-023
gb|AY873214.1|AY873214 04ET3_387_C_072_000_001C08 Oryza sat... 113 2e-022
dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-020
ref|XM_473793.1| Oryza sativa (japonica cultivar-group), p... 107 1e-020
gb|D39510.1|D39510 RICS0891A Rice shoot Oryza sativa (japon... 101 9e-019
gb|D40243.1|D40243 RICS2076A Rice shoot Oryza sativa (japon... 98 1e-017
gb|AU063990.2|AU063990 AU063990 Rice panicle at flowering s... 98 1e-017
gb|AACV01010438.1| Oryza sativa (japonica cultivar-group) c... 94 2e-016
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 94 2e-016
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromoso... 94 2e-016
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 94 2e-016
gb|AQ578490.1|AQ578490 nbxb0093C13r CUGI Rice BAC Library O... 90 3e-015
gb|D41088.1|D41088 RICS3357A Rice shoot Oryza sativa (japon... 90 3e-015
gb|D40632.1|D40632 RICS2719A Rice shoot Oryza sativa (japon... 88 1e-014
gb|AU222739.1|AU222739 AU222739 Rice shoot Oryza sativa (ja... 88 1e-014
gb|AQ861400.1|AQ861400 nbeb0016H04r CUGI Rice BAC Library (... 86 5e-014
gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (j... 82 8e-013
gb|D21903.1|D21903 RICC10035A Rice callus Oryza sativa (jap... 80 3e-012
gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (j... 78 1e-011
gb|D24203.1|D24203 RICR1522A Rice root Oryza sativa (japoni... 76 5e-011
gb|AU066253.1|AU066253 AU066253 Rice shoot Oryza sativa (ja... 76 5e-011
gb|AC136481.6| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|AC134925.4| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
ref|NT_107129.1| Oryza sativa (japonica cultivar-group) 76 5e-011
gb|AACV01023313.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|D41305.1|D41305 RICS3696A Rice shoot Oryza sativa (japon... 70 3e-009
gb|C25353.1|C25353 C25353 Rice shoot Oryza sativa (japonica... 68 1e-008
gb|CB651563.1|CB651563 OSJNEb16J04.r OSJNEb Oryza sativa (j... 66 5e-008
gb|CB655759.1|CB655759 OSJNEc09H12.r OSJNEc Oryza sativa (j... 66 5e-008
dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AP004872.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
dbj|AP005398.3| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AACV01003896.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01010531.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
ref|NT_107200.1| Oryza sativa (japonica cultivar-group) 64 2e-007
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 64 2e-007
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromoso... 64 2e-007
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|DU168821.1|DU168821 UCDRdSpm767_3.1 UCD RdSpm Rice Inser... 60 3e-006
gb|DU169063.1|DU169063 UCDRdSpm768_3.1 UCD RdSpm Rice Inser... 60 3e-006
gb|C27146.1|C27146 C27146 Rice callus cDNA Oryza sativa (ja... 58 1e-005
gb|AU066184.1|AU066184 AU066184 Rice shoot Oryza sativa (ja... 58 1e-005
gb|CB648710.1|CB648710 OSJNEb12D18.f OSJNEb Oryza sativa (j... 58 1e-005
gb|CB661481.1|CB661481 OSJNEd04G16.f OSJNEd Oryza sativa (j... 58 1e-005
gb|CF308277.1|CF308277 ABF--02-A16.b1 ABF3-overexpressing t... 58 1e-005
dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 58 1e-005
dbj|AP004784.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|AACV01013814.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CB654165.1|CB654165 OSJNEc05O13.f OSJNEc Oryza sativa (j... 56 5e-005
gb|CB667671.1|CB667671 OSJNEd15B19.f OSJNEd Oryza sativa (j... 56 5e-005
dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA... 56 5e-005
dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA... 56 5e-005
gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 gen... 56 5e-005
gb|AACV01008282.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA 56 5e-005
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 56 5e-005
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 56 5e-005
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|AC120506.5| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|AQ916489.1|AQ916489 nbeb0065O07r CUGI Rice BAC Library (... 54 2e-004
gb|AU030804.1|AU030804 AU030804 Rice cDNA from immature lea... 54 2e-004
gb|AU174270.1|AU174270 AU174270 Rice shoot Oryza sativa (ja... 54 2e-004
gb|AU182333.1|AU182333 AU182333 Rice panicle at flowering s... 54 2e-004
gb|AU183251.1|AU183251 AU183251 Rice cDNA from immature lea... 54 2e-004
gb|CA754118.1|CA754118 BR040009000_PLATE_F01_6_013.ab1 OA O... 54 2e-004
dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbar... 54 2e-004
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01005221.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01006176.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01017696.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 54 2e-004
ref|NT_107190.1| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP005859.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP005868.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AQ794723.1|AQ794723 nbxb0053F20f CUGI Rice BAC Library O... 52 7e-004
gb|D40588.1|D40588 RICS2663A Rice shoot Oryza sativa (japon... 52 7e-004
gb|C26345.1|C26345 C26345 Rice callus cDNA Oryza sativa (ja... 52 7e-004
gb|AU090659.1|AU090659 AU090659 Rice cDNA from immature lea... 52 7e-004
gb|CB641199.1|CB641199 OSJNEa18D20.f OSJNEa Oryza sativa (j... 52 7e-004
gb|CB666637.1|CB666637 OSJNEd13J21.f OSJNEd Oryza sativa (j... 52 7e-004
gb|CB670860.1|CB670860 OSJNEe04C15.f OSJNEe Oryza sativa (j... 52 7e-004
gb|CF306094.1|CF306094 HDA1--02-K22.g1 OsHDAC1-overexpressi... 52 7e-004
gb|CF306473.1|CF306473 HDA1--03-P07.g1 OsHDAC1-overexpressi... 52 7e-004
dbj|AP002539.2| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
dbj|AP003953.1| Oryza sativa (japonica cultivar-group) chro... 52 7e-004
dbj|AP004555.1| Oryza sativa (japonica cultivar-group) chro... 52 7e-004
dbj|AK073728.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
dbj|AP004689.3| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
dbj|AP004674.2| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
dbj|AP002521.1| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|AACV01000239.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
gb|AACV01016440.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
gb|AACV01018368.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA 52 7e-004
ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA 52 7e-004
ref|XM_493762.2| Oryza sativa (japonica cultivar-group), mRNA 52 7e-004
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 52 7e-004
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 52 7e-004
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|D16085.1|D16085 RICC3021A Rice callus Oryza sativa (japo... 50 0.003
gb|AU075356.1|AU075356 AU075356 Rice callus Oryza sativa (j... 50 0.003
dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK101039.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AC113930.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AACV01010435.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01010660.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01014438.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NM_187656.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|XM_473788.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 50 0.003
emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromoso... 50 0.003
emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromoso... 50 0.003
gb|AQ573754.1|AQ573754 nbxb0084F10r CUGI Rice BAC Library O... 46 0.045
gb|CZ593708.1|CZ593708 UCDRGT881_5.1 UCD RGT Rice Insertion... 46 0.045
gb|D23862.1|D23862 RICR0449A Rice root Oryza sativa (japoni... 46 0.045
gb|CB645671.1|CB645671 OSJNEb07I16.f OSJNEb Oryza sativa (j... 46 0.045
gb|CB677343.1|CB677343 OSJNEe14C21.f OSJNEe Oryza sativa (j... 46 0.045
dbj|AP004143.1| Oryza sativa (japonica cultivar-group) chro... 46 0.045
dbj|AP004239.1| Oryza sativa (japonica cultivar-group) chro... 46 0.045
dbj|AP004844.1| Oryza sativa (japonica cultivar-group) chro... 46 0.045
dbj|AK071937.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.045
dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.045
dbj|AK105359.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.045
gb|AC134230.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbar... 46 0.045
dbj|AP004154.3| Oryza sativa (japonica cultivar-group) geno... 46 0.045
dbj|AP005112.3| Oryza sativa (japonica cultivar-group) geno... 46 0.045
gb|AACV01005367.1| Oryza sativa (japonica cultivar-group) c... 46 0.045
gb|AACV01005768.1| Oryza sativa (japonica cultivar-group) c... 46 0.045
gb|AACV01006480.1| Oryza sativa (japonica cultivar-group) c... 46 0.045
gb|AACV01013061.1| Oryza sativa (japonica cultivar-group) c... 46 0.045
gb|AACV01018715.1| Oryza sativa (japonica cultivar-group) c... 46 0.045
dbj|AP005828.2| Oryza sativa (japonica cultivar-group) geno... 46 0.045
dbj|AP007223.2| Oryza sativa (japonica cultivar-group) geno... 46 0.045
ref|XM_473792.1| Oryza sativa (japonica cultivar-group), p... 46 0.045
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 46 0.045
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 46 0.045
dbj|AP004399.3| Oryza sativa (japonica cultivar-group) geno... 46 0.045
gb|AC134236.4| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
gb|D49161.1|D49161 RICS15861A Rice green shoot Oryza sativa... 44 0.18
gb|AU076005.1|AU076005 AU076005 Rice callus Oryza sativa (j... 44 0.18
gb|AU076006.1|AU076006 AU076006 Rice callus Oryza sativa (j... 44 0.18
gb|AU057309.2|AU057309 AU057309 Oryza sativa mature leaf Ni... 44 0.18
gb|CB642793.1|CB642793 OSJNEb03C15.f OSJNEb Oryza sativa (j... 44 0.18
gb|AC087597.1|AC087597 Oryza sativa (japonica cultivar-grou... 44 0.18
dbj|AP004152.1| Oryza sativa (japonica cultivar-group) chro... 44 0.18
dbj|AP004631.1| Oryza sativa (japonica cultivar-group) chro... 44 0.18
dbj|AP004682.1| Oryza sativa (japonica cultivar-group) chro... 44 0.18
dbj|AP005706.1| Oryza sativa (japonica cultivar-group) chro... 44 0.18
gb|AC138007.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK071481.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK071687.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK106672.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK119941.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AP004397.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP004886.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F2... 44 0.18
dbj|AP004058.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP004838.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AC137595.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
dbj|AP003510.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP006056.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP005720.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AC104284.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
dbj|AP004729.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP005460.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AACV01002735.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01003252.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01003473.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01005220.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01005492.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01009812.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01010434.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01010969.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01012730.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01013223.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01014381.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01014489.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01018311.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01020112.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01020366.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01021941.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
ref|NM_190725.1| Oryza sativa (japonica cultivar-group), p... 44 0.18
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 44 0.18
ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.18
ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.18
ref|XM_473787.1| Oryza sativa (japonica cultivar-group), p... 44 0.18
ref|NT_079861.2| Oryza sativa (japonica cultivar-group) 44 0.18
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 44 0.18
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 44 0.18
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 44 0.18
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 44 0.18
ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.18
dbj|AP005311.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 44 0.18
dbj|AP004643.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP003612.2| Oryza sativa (japonica cultivar-group) geno... 44 0.18
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 44 0.18
dbj|AP003611.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromoso... 44 0.18
gb|AC084817.5| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
>gb|CB648189.1|CB648189 OSJNEb11H13.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11H13 5', mRNA sequence
Length = 701
Score = 543 bits (274), Expect = e-152
Identities = 382/418 (91%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 144 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 203
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 204 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 263
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 264 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 323
Query: 356 actccgccggcaccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgaga 415
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 324 actccgccggcaccgtcgccaccttctacctgtcgtcgcaggggtcgcagcacgacgaga 383
Query: 416 tcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 384 tcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgt 443
Query: 476 acagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcgg 535
||||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||
Sbjct: 444 acagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaagg 503
Query: 536 ccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacgg 593
||||||| | |||||||| || ||||||||| ||||| || | ||||||||||||||
Sbjct: 504 acttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgg 561
Score = 77.8 bits (39), Expect = 1e-011
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 621 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgca 675
>gb|CB650792.1|CB650792 OSJNEb15H04.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H04 5', mRNA sequence
Length = 787
Score = 543 bits (274), Expect = e-152
Identities = 382/418 (91%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 144 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 203
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 204 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 263
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 264 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 323
Query: 356 actccgccggcaccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgaga 415
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 324 actccgccggcaccgtcgccaccttctacctgtcgtcgcaggggtcgcagcacgacgaga 383
Query: 416 tcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 384 tcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgt 443
Query: 476 acagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcgg 535
||||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||
Sbjct: 444 acagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaagg 503
Query: 536 ccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacgg 593
||||||| | |||||||| || ||||||||| ||||| || | ||||||||||||||
Sbjct: 504 acttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgg 561
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 621 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 680
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 681 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 740
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 741 cgagcgggtgcacgtcgcaggacgcc 766
>gb|CB655758.1|CB655758 OSJNEc09H12.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09H12 5', mRNA sequence
Length = 782
Score = 543 bits (274), Expect = e-152
Identities = 382/418 (91%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 144 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 203
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 204 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 263
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 264 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 323
Query: 356 actccgccggcaccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgaga 415
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 324 actccgccggcaccgtcgccaccttctacctgtcgtcgcaggggtcgcagcacgacgaga 383
Query: 416 tcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 384 tcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgt 443
Query: 476 acagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcgg 535
||||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||
Sbjct: 444 acagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaagg 503
Query: 536 ccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacgg 593
||||||| | |||||||| || ||||||||| ||||| || | ||||||||||||||
Sbjct: 504 acttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgg 561
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 621 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 680
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 681 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 740
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 741 cgagcgggtgcacgtcgcaggacgcc 766
>gb|CB658953.1|CB658953 OSJNEc15H06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc15H06 5', mRNA sequence
Length = 695
Score = 543 bits (274), Expect = e-152
Identities = 382/418 (91%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 138 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 197
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 198 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 257
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 258 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 317
Query: 356 actccgccggcaccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgaga 415
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 318 actccgccggcaccgtcgccaccttctacctgtcgtcgcaggggtcgcagcacgacgaga 377
Query: 416 tcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 378 tcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgt 437
Query: 476 acagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcgg 535
||||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||
Sbjct: 438 acagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaagg 497
Query: 536 ccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacgg 593
||||||| | |||||||| || ||||||||| ||||| || | ||||||||||||||
Sbjct: 498 acttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgg 555
Score = 77.8 bits (39), Expect = 1e-011
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 615 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgca 669
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full
insert sequence
Length = 1101
Score = 543 bits (274), Expect = e-152
Identities = 382/418 (91%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 156 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 215
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 216 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 275
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 276 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 335
Query: 356 actccgccggcaccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgaga 415
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 336 actccgccggcaccgtcgccaccttctacctgtcgtcgcaggggtcgcagcacgacgaga 395
Query: 416 tcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 396 tcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgt 455
Query: 476 acagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcgg 535
||||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||
Sbjct: 456 acagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaagg 515
Query: 536 ccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacgg 593
||||||| | |||||||| || ||||||||| ||||| || | ||||||||||||||
Sbjct: 516 acttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgg 573
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 633 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 692
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 693 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 752
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 753 cgagcgggtgcacgtcgcaggacgcc 778
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 868 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 915
>gb|CB656073.1|CB656073 OSJNEc09P24.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09P24 5', mRNA sequence
Length = 817
Score = 535 bits (270), Expect = e-149
Identities = 381/418 (91%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 137 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 196
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 197 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 256
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 257 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 316
Query: 356 actccgccggcaccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgaga 415
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 317 actccgccggcaccgtcgccaccttctacctgtcgtcgcaggggtcgcagcacgacgaga 376
Query: 416 tcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
|||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 377 tcgacttctagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgt 436
Query: 476 acagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcgg 535
||||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||
Sbjct: 437 acagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaagg 496
Query: 536 ccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacgg 593
||||||| | |||||||| || ||||||||| ||||| || | ||||||||||||||
Sbjct: 497 acttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgg 554
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 656 cgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggc 698
|||||||||||||||| ||| ||||||||||||| ||||||||
Sbjct: 620 cgatgcgggtgtacgcgagcctgtgggacgcggatgagtgggc 662
>gb|CB652674.1|CB652674 OSJNEc02O21.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02O21 5', mRNA sequence
Length = 625
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 95 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 154
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 155 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 214
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 215 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 274
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 275 actccgccggcaccgtcgccaccttcta 302
Score = 208 bits (105), Expect = 5e-051
Identities = 186/209 (88%), Gaps = 3/209 (1%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 456
Query: 448 gagccgtacacggtgcaca-cgaacgtgtacagccaggggaagggcgg-gcgggagcagc 505
||||||||||||||||||| | |||||||||||||||||||| ||||| || |||||||
Sbjct: 457 gagccgtacacggtgcacacccaacgtgtacagccaggggaaaggcggcccgcgagcagc 516
Query: 506 agttccggatgtggttcgaccccacggcggccttccacgccta-ctccgtgctgtggaac 564
||||||| |||||||||||||| || || ||||||| | || |||||| || ||||||
Sbjct: 517 agttccgcatgtggttcgaccctaccaaggacttccacacttacctccgtcctctggaac 576
Query: 565 cccgcccacgtcgtcttctacgtggacgg 593
||| ||||| || | ||||||||||||||
Sbjct: 577 ccctcccacatccttttctacgtggacgg 605
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6226875 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 6226934
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 6226935 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 6226994
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 6226995 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 6227054
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 6227055 actccgccggcaccgtcgccaccttcta 6227082
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6227177 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 6227236
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 6227237 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 6227296
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 6227297 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 6227356
Query: 568 gcccac 573
|||||
Sbjct: 6227357 tcccac 6227362
Score = 143 bits (72), Expect = 3e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 6239513 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 6239454
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 6239453 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 6239394
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 372
||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 6239393 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtc 6239346
Score = 129 bits (65), Expect = 4e-027
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 6215441 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 6215500
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 6215501 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 6215560
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 6215561 ttccgcctctggttcgaccccacccagtccttccacacctactcc 6215605
Score = 103 bits (52), Expect = 2e-019
Identities = 148/180 (82%)
Strand = Plus / Minus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| || ||| || |||||||||||||||||||||||||| | || ||||
Sbjct: 6239255 tcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggg 6239196
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| ||||
Sbjct: 6239195 gagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatgcag 6239136
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| | |||| ||||||||| || ||||||| |||||||| | || |||||||||
Sbjct: 6239135 ttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaacccc 6239076
Score = 99.6 bits (50), Expect = 3e-018
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 405 gcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgca 464
|||||||||| | ||||||||||||||||| |||| |||||| ||||||||| | ||||
Sbjct: 6220198 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 6220257
Query: 465 cacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcga 524
||| ||| | | |||| | || ||||||| ||| |||||||||||| | | ||||||||
Sbjct: 6220258 caccaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcga 6220317
Query: 525 ccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||||| || | ||||||| |||||||| | || ||||||||
Sbjct: 6220318 ccccaccgccgacttccacacctactccatcctctggaaccc 6220359
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 6215198 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 6215257
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 6215258 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 6215302
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 6227886 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 6227945
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 6227946 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 6228005
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 6228006 cgagcgggtgcacgtcgcaggacgcc 6228031
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 6215827 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 6215879
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 6228121 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 6228168
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 883 tacatgatctacaactactgcaccgat 909
|||||||||||||||||||||||||||
Sbjct: 6238622 tacatgatctacaactactgcaccgat 6238596
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 gatcgatcgatcgatcgagcgagcg 113
|||||||||||||||||||||||||
Sbjct: 230620 gatcgatcgatcgatcgagcgagcg 230644
Score = 46.1 bits (23), Expect = 0.045
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 634 gtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggag 693
||||| ||||||||| |||||| ||| |||| ||||||| | ||| |||||||||||
Sbjct: 6220732 gtgccattcccgacgcggcagccagtgcacgtgttcgccagcatctggaacgcggaggag 6220791
Query: 694 tgggccacgca 704
||||| |||||
Sbjct: 6220792 tgggcgacgca 6220802
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 ggcggcggtgctgctgctgcagcacg 163
|||||||||||||||||||| |||||
Sbjct: 786673 ggcggcggtgctgctgctgctgcacg 786698
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0622F03
Length = 170064
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 161956 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 162015
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 162016 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 162075
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 162076 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 162135
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 162136 actccgccggcaccgtcgccaccttcta 162163
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162258 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 162317
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 162318 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 162377
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 162378 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 162437
Query: 568 gcccac 573
|||||
Sbjct: 162438 tcccac 162443
Score = 129 bits (65), Expect = 4e-027
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 150522 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 150581
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 150582 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 150641
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 150642 ttccgcctctggttcgaccccacccagtccttccacacctactcc 150686
Score = 99.6 bits (50), Expect = 3e-018
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 405 gcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgca 464
|||||||||| | ||||||||||||||||| |||| |||||| ||||||||| | ||||
Sbjct: 155279 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 155338
Query: 465 cacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcga 524
||| ||| | | |||| | || ||||||| ||| |||||||||||| | | ||||||||
Sbjct: 155339 caccaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcga 155398
Query: 525 ccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||||| || | ||||||| |||||||| | || ||||||||
Sbjct: 155399 ccccaccgccgacttccacacctactccatcctctggaaccc 155440
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 150279 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 150338
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 150339 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 150383
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 162967 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 163026
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 163027 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 163086
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 163087 cgagcgggtgcacgtcgcaggacgcc 163112
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 150908 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 150960
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 163202 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 163249
Score = 46.1 bits (23), Expect = 0.045
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 634 gtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggag 693
||||| ||||||||| |||||| ||| |||| ||||||| | ||| |||||||||||
Sbjct: 155813 gtgccattcccgacgcggcagccagtgcacgtgttcgccagcatctggaacgcggaggag 155872
Query: 694 tgggccacgca 704
||||| |||||
Sbjct: 155873 tgggcgacgca 155883
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0028E05
Length = 157631
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 69165 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 69224
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 69225 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 69284
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 69285 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 69344
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 69345 actccgccggcaccgtcgccaccttcta 69372
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69467 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 69526
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 69527 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 69586
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 69587 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 69646
Query: 568 gcccac 573
|||||
Sbjct: 69647 tcccac 69652
Score = 143 bits (72), Expect = 3e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 81803 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 81744
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 81743 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 81684
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 372
||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 81683 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtc 81636
Score = 129 bits (65), Expect = 4e-027
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 57731 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 57790
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 57791 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 57850
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 57851 ttccgcctctggttcgaccccacccagtccttccacacctactcc 57895
Score = 103 bits (52), Expect = 2e-019
Identities = 148/180 (82%)
Strand = Plus / Minus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| || ||| || |||||||||||||||||||||||||| | || ||||
Sbjct: 81545 tcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggg 81486
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| ||||
Sbjct: 81485 gagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatgcag 81426
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| | |||| ||||||||| || ||||||| |||||||| | || |||||||||
Sbjct: 81425 ttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaacccc 81366
Score = 99.6 bits (50), Expect = 3e-018
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 405 gcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgca 464
|||||||||| | ||||||||||||||||| |||| |||||| ||||||||| | ||||
Sbjct: 62488 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 62547
Query: 465 cacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcga 524
||| ||| | | |||| | || ||||||| ||| |||||||||||| | | ||||||||
Sbjct: 62548 caccaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcga 62607
Query: 525 ccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||||| || | ||||||| |||||||| | || ||||||||
Sbjct: 62608 ccccaccgccgacttccacacctactccatcctctggaaccc 62649
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 57488 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 57547
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 57548 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 57592
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 70176 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 70235
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 70236 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 70295
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 70296 cgagcgggtgcacgtcgcaggacgcc 70321
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 58117 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 58169
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 70411 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 70458
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 883 tacatgatctacaactactgcaccgat 909
|||||||||||||||||||||||||||
Sbjct: 80912 tacatgatctacaactactgcaccgat 80886
Score = 46.1 bits (23), Expect = 0.045
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 634 gtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggag 693
||||| ||||||||| |||||| ||| |||| ||||||| | ||| |||||||||||
Sbjct: 63022 gtgccattcccgacgcggcagccagtgcacgtgttcgccagcatctggaacgcggaggag 63081
Query: 694 tgggccacgca 704
||||| |||||
Sbjct: 63082 tgggcgacgca 63092
>gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014850, whole
genome shotgun sequence
Length = 60324
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Minus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 34943 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 34884
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 34883 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 34824
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 34823 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 34764
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 34763 actccgccggcaccgtcgccaccttcta 34736
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Minus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34641 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 34582
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 34581 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 34522
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 34521 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 34462
Query: 568 gcccac 573
|||||
Sbjct: 34461 tcccac 34456
Score = 143 bits (72), Expect = 3e-031
Identities = 144/168 (85%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 22300 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 22359
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 22360 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 22419
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 372
||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 22420 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtc 22467
Score = 129 bits (65), Expect = 4e-027
Identities = 140/165 (84%)
Strand = Plus / Minus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 46377 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 46318
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 46317 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 46258
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 46257 ttccgcctctggttcgaccccacccagtccttccacacctactcc 46213
Score = 103 bits (52), Expect = 2e-019
Identities = 148/180 (82%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| || ||| || |||||||||||||||||||||||||| | || ||||
Sbjct: 22558 tcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggg 22617
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| ||||
Sbjct: 22618 gagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatgcag 22677
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| | |||| ||||||||| || ||||||| |||||||| | || |||||||||
Sbjct: 22678 ttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaacccc 22737
Score = 99.6 bits (50), Expect = 3e-018
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 405 gcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgca 464
|||||||||| | ||||||||||||||||| |||| |||||| ||||||||| | ||||
Sbjct: 41620 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 41561
Query: 465 cacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcga 524
||| ||| | | |||| | || ||||||| ||| |||||||||||| | | ||||||||
Sbjct: 41560 caccaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcga 41501
Query: 525 ccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||||| || | ||||||| |||||||| | || ||||||||
Sbjct: 41500 ccccaccgccgacttccacacctactccatcctctggaaccc 41459
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 46620 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 46561
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 46560 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 46516
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 33932 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 33873
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 33872 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 33813
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 33812 cgagcgggtgcacgtcgcaggacgcc 33787
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 45991 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 45939
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 33697 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 33650
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 883 tacatgatctacaactactgcaccgat 909
|||||||||||||||||||||||||||
Sbjct: 23193 tacatgatctacaactactgcaccgat 23219
Score = 46.1 bits (23), Expect = 0.045
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 634 gtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggag 693
||||| ||||||||| |||||| ||| |||| ||||||| | ||| |||||||||||
Sbjct: 41086 gtgccattcccgacgcggcagccagtgcacgtgttcgccagcatctggaacgcggaggag 41027
Query: 694 tgggccacgca 704
||||| |||||
Sbjct: 41026 tgggcgacgca 41016
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10139708 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 10139767
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 10139768 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 10139827
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 10139828 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 10139887
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 10139888 actccgccggcaccgtcgccaccttcta 10139915
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10140010 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 10140069
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 10140070 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 10140129
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 10140130 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 10140189
Query: 568 gcccac 573
|||||
Sbjct: 10140190 tcccac 10140195
Score = 143 bits (72), Expect = 3e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 10152351 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 10152292
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 10152291 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 10152232
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 372
||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 10152231 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtc 10152184
Score = 129 bits (65), Expect = 4e-027
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 10128274 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 10128333
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 10128334 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 10128393
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 10128394 ttccgcctctggttcgaccccacccagtccttccacacctactcc 10128438
Score = 103 bits (52), Expect = 2e-019
Identities = 148/180 (82%)
Strand = Plus / Minus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| || ||| || |||||||||||||||||||||||||| | || ||||
Sbjct: 10152093 tcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggg 10152034
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| ||||
Sbjct: 10152033 gagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatgcag 10151974
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| | |||| ||||||||| || ||||||| |||||||| | || |||||||||
Sbjct: 10151973 ttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaacccc 10151914
Score = 99.6 bits (50), Expect = 3e-018
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 405 gcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgca 464
|||||||||| | ||||||||||||||||| |||| |||||| ||||||||| | ||||
Sbjct: 10133031 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 10133090
Query: 465 cacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcga 524
||| ||| | | |||| | || ||||||| ||| |||||||||||| | | ||||||||
Sbjct: 10133091 caccaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcga 10133150
Query: 525 ccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||||| || | ||||||| |||||||| | || ||||||||
Sbjct: 10133151 ccccaccgccgacttccacacctactccatcctctggaaccc 10133192
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 10128031 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 10128090
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 10128091 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 10128135
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 10140719 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 10140778
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 10140779 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 10140838
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 10140839 cgagcgggtgcacgtcgcaggacgcc 10140864
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 10128660 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 10128712
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 10140954 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 10141001
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 883 tacatgatctacaactactgcaccgat 909
|||||||||||||||||||||||||||
Sbjct: 10151458 tacatgatctacaactactgcaccgat 10151432
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 gatcgatcgatcgatcgagcgagcg 113
|||||||||||||||||||||||||
Sbjct: 4095080 gatcgatcgatcgatcgagcgagcg 4095104
Score = 46.1 bits (23), Expect = 0.045
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 634 gtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggag 693
||||| ||||||||| |||||| ||| |||| ||||||| | ||| |||||||||||
Sbjct: 10133565 gtgccattcccgacgcggcagccagtgcacgtgttcgccagcatctggaacgcggaggag 10133624
Query: 694 tgggccacgca 704
||||| |||||
Sbjct: 10133625 tgggcgacgca 10133635
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 ggcggcggtgctgctgctgcagcacg 163
|||||||||||||||||||| |||||
Sbjct: 4645138 ggcggcggtgctgctgctgctgcacg 4645163
Score = 44.1 bits (22), Expect = 0.18
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 aaccgatcgatcgatcgatcga 106
||||||||||||||||||||||
Sbjct: 3240169 aaccgatcgatcgatcgatcga 3240190
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 27838445 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 27838504
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 27838505 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 27838564
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 27838565 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 27838624
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 27838625 actccgccggcaccgtcgccaccttcta 27838652
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27838747 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 27838806
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 27838807 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 27838866
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 27838867 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 27838926
Query: 568 gcccac 573
|||||
Sbjct: 27838927 tcccac 27838932
Score = 143 bits (72), Expect = 3e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 27851088 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 27851029
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 27851028 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 27850969
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 372
||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 27850968 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtc 27850921
Score = 129 bits (65), Expect = 4e-027
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 27827011 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 27827070
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 27827071 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 27827130
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 27827131 ttccgcctctggttcgaccccacccagtccttccacacctactcc 27827175
Score = 103 bits (52), Expect = 2e-019
Identities = 148/180 (82%)
Strand = Plus / Minus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| || ||| || |||||||||||||||||||||||||| | || ||||
Sbjct: 27850830 tcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggg 27850771
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| ||||
Sbjct: 27850770 gagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatgcag 27850711
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| | |||| ||||||||| || ||||||| |||||||| | || |||||||||
Sbjct: 27850710 ttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaacccc 27850651
Score = 99.6 bits (50), Expect = 3e-018
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 405 gcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgca 464
|||||||||| | ||||||||||||||||| |||| |||||| ||||||||| | ||||
Sbjct: 27831768 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 27831827
Query: 465 cacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcga 524
||| ||| | | |||| | || ||||||| ||| |||||||||||| | | ||||||||
Sbjct: 27831828 caccaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcga 27831887
Query: 525 ccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||||| || | ||||||| |||||||| | || ||||||||
Sbjct: 27831888 ccccaccgccgacttccacacctactccatcctctggaaccc 27831929
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 27826768 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 27826827
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 27826828 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 27826872
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 27839456 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 27839515
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 27839516 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 27839575
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 27839576 cgagcgggtgcacgtcgcaggacgcc 27839601
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 27827397 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 27827449
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 406 cacgacgagatcgacttcgagttcctggg 434
|||||||||||||||||||||||||||||
Sbjct: 12967151 cacgacgagatcgacttcgagttcctggg 12967179
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 27839691 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 27839738
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 883 tacatgatctacaactactgcaccgat 909
|||||||||||||||||||||||||||
Sbjct: 27850195 tacatgatctacaactactgcaccgat 27850169
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 gatcgatcgatcgatcgagcgagcg 113
|||||||||||||||||||||||||
Sbjct: 21793817 gatcgatcgatcgatcgagcgagcg 21793841
Score = 46.1 bits (23), Expect = 0.045
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 634 gtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggag 693
||||| ||||||||| |||||| ||| |||| ||||||| | ||| |||||||||||
Sbjct: 27832302 gtgccattcccgacgcggcagccagtgcacgtgttcgccagcatctggaacgcggaggag 27832361
Query: 694 tgggccacgca 704
||||| |||||
Sbjct: 27832362 tgggcgacgca 27832372
Score = 46.1 bits (23), Expect = 0.045
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 aaccgatcgatcgatcgatcgag 107
|||||||||||||||||||||||
Sbjct: 2809371 aaccgatcgatcgatcgatcgag 2809349
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 ggcggcggtgctgctgctgcagcacg 163
|||||||||||||||||||| |||||
Sbjct: 22343875 ggcggcggtgctgctgctgctgcacg 22343900
Score = 44.1 bits (22), Expect = 0.18
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 aaccgatcgatcgatcgatcga 106
||||||||||||||||||||||
Sbjct: 20938906 aaccgatcgatcgatcgatcga 20938927
Score = 44.1 bits (22), Expect = 0.18
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 401 cgcagcacgacgagatcgacttcgagttcctggg 434
|||||| ||||||| | |||||||||||||||||
Sbjct: 4794497 cgcagcgcgacgagctggacttcgagttcctggg 4794464
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 301 bits (152), Expect = 5e-079
Identities = 194/208 (93%)
Strand = Plus / Plus
Query: 176 gcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgcggcaaga 235
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 28761390 gcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaaga 28761449
Query: 236 tcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcgggcttcc 295
|||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 28761450 tcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttcc 28761509
Query: 296 agtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggggg 355
|||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 28761510 agtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggca 28761569
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 28761570 actccgccggcaccgtcgccaccttcta 28761597
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28761692 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 28761751
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 28761752 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 28761811
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 28761812 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 28761871
Query: 568 gcccac 573
|||||
Sbjct: 28761872 tcccac 28761877
Score = 143 bits (72), Expect = 3e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 28774028 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 28773969
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 28773968 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 28773909
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 372
||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 28773908 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtc 28773861
Score = 129 bits (65), Expect = 4e-027
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 28749956 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 28750015
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 28750016 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 28750075
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 28750076 ttccgcctctggttcgaccccacccagtccttccacacctactcc 28750120
Score = 103 bits (52), Expect = 2e-019
Identities = 148/180 (82%)
Strand = Plus / Minus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| || ||| || |||||||||||||||||||||||||| | || ||||
Sbjct: 28773770 tcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggg 28773711
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| ||||
Sbjct: 28773710 gagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatgcag 28773651
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| | |||| ||||||||| || ||||||| |||||||| | || |||||||||
Sbjct: 28773650 ttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaacccc 28773591
Score = 99.6 bits (50), Expect = 3e-018
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 405 gcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgca 464
|||||||||| | ||||||||||||||||| |||| |||||| ||||||||| | ||||
Sbjct: 28754713 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 28754772
Query: 465 cacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcga 524
||| ||| | | |||| | || ||||||| ||| |||||||||||| | | ||||||||
Sbjct: 28754773 caccaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcga 28754832
Query: 525 ccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||||| || | ||||||| |||||||| | || ||||||||
Sbjct: 28754833 ccccaccgccgacttccacacctactccatcctctggaaccc 28754874
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 28749713 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 28749772
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 28749773 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 28749817
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 28762401 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 28762460
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 28762461 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 28762520
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 28762521 cgagcgggtgcacgtcgcaggacgcc 28762546
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 28750342 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 28750394
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 406 cacgacgagatcgacttcgagttcctggg 434
|||||||||||||||||||||||||||||
Sbjct: 13230402 cacgacgagatcgacttcgagttcctggg 13230430
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 28762636 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 28762683
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 883 tacatgatctacaactactgcaccgat 909
|||||||||||||||||||||||||||
Sbjct: 28773137 tacatgatctacaactactgcaccgat 28773111
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 gatcgatcgatcgatcgagcgagcg 113
|||||||||||||||||||||||||
Sbjct: 22765207 gatcgatcgatcgatcgagcgagcg 22765231
Score = 46.1 bits (23), Expect = 0.045
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 634 gtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggag 693
||||| ||||||||| |||||| ||| |||| ||||||| | ||| |||||||||||
Sbjct: 28755247 gtgccattcccgacgcggcagccagtgcacgtgttcgccagcatctggaacgcggaggag 28755306
Query: 694 tgggccacgca 704
||||| |||||
Sbjct: 28755307 tgggcgacgca 28755317
Score = 46.1 bits (23), Expect = 0.045
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 aaccgatcgatcgatcgatcgag 107
|||||||||||||||||||||||
Sbjct: 2914476 aaccgatcgatcgatcgatcgag 2914454
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 ggcggcggtgctgctgctgcagcacg 163
|||||||||||||||||||| |||||
Sbjct: 23321188 ggcggcggtgctgctgctgctgcacg 23321213
Score = 44.1 bits (22), Expect = 0.18
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 aaccgatcgatcgatcgatcga 106
||||||||||||||||||||||
Sbjct: 21828671 aaccgatcgatcgatcgatcga 21828692
Score = 44.1 bits (22), Expect = 0.18
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 401 cgcagcacgacgagatcgacttcgagttcctggg 434
|||||| ||||||| | |||||||||||||||||
Sbjct: 4973862 cgcagcgcgacgagctggacttcgagttcctggg 4973829
Score = 44.1 bits (22), Expect = 0.18
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 401 cgcagcacgacgagatcgacttcgagttcctggg 434
|||||| ||||||| | |||||||||||||||||
Sbjct: 4958750 cgcagcgcgacgagctggacttcgagttcctggg 4958717
>gb|CB651562.1|CB651562 OSJNEb16J04.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16J04 5', mRNA sequence
Length = 753
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 182
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 183 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 242
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 243 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 302
Query: 568 gcccac 573
|||||
Sbjct: 303 tcccac 308
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 356 actccgccggcaccgtcgccaccttcta 383
||||||||||||||||||||||||||||
Sbjct: 1 actccgccggcaccgtcgccaccttcta 28
>gb|CB655114.1|CB655114 OSJNEc08D08.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08D08 5', mRNA sequence
Length = 730
Score = 234 bits (118), Expect = 9e-059
Identities = 169/186 (90%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggc 78
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 79 gagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcag 138
Query: 508 ttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaacccc 567
||||| |||||||||||||| || || ||||||| | |||||||| || |||||||||
Sbjct: 139 ttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccc 198
Query: 568 gcccac 573
|||||
Sbjct: 199 tcccac 204
>gb|AU183876.1|AU183876 AU183876 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60049, mRNA sequence
Length = 637
Score = 228 bits (115), Expect = 6e-057
Identities = 301/363 (82%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 190 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 249
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 250 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 309
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 310 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 369
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||||||||||||||||| | || |
Sbjct: 370 ttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgacc 429
Query: 445 ggggagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcag 504
||||||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| |
Sbjct: 430 ggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatg 489
Query: 505 cagttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaac 564
|||||||| | |||| ||||||||| || ||||||| |||||||| | || ||||||
Sbjct: 490 cagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaac 549
Query: 565 ccc 567
|||
Sbjct: 550 ccc 552
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
insert sequence
Length = 1253
Score = 228 bits (115), Expect = 6e-057
Identities = 301/363 (82%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 194 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 253
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 254 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 313
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 314 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 373
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||||||||||||||||| | || |
Sbjct: 374 ttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgacc 433
Query: 445 ggggagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcag 504
||||||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| |
Sbjct: 434 ggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatg 493
Query: 505 cagttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaac 564
|||||||| | |||| ||||||||| || ||||||| |||||||| | || ||||||
Sbjct: 494 cagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaac 553
Query: 565 ccc 567
|||
Sbjct: 554 ccc 556
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 883 tacatgatctacaactactgcaccgat 909
|||||||||||||||||||||||||||
Sbjct: 920 tacatgatctacaactactgcaccgat 946
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full
insert sequence
Length = 566
Score = 228 bits (115), Expect = 6e-057
Identities = 301/363 (82%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 204 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 263
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 264 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 323
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 324 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 383
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||||||||||||||||| | || |
Sbjct: 384 ttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgacc 443
Query: 445 ggggagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcag 504
||||||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| |
Sbjct: 444 ggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatg 503
Query: 505 cagttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaac 564
|||||||| | |||| ||||||||| || ||||||| |||||||| | || ||||||
Sbjct: 504 cagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaac 563
Query: 565 ccc 567
|||
Sbjct: 564 ccc 566
>gb|CB671695.1|CB671695 OSJNEe05G07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05G07 5', mRNA sequence
Length = 753
Score = 220 bits (111), Expect = 1e-054
Identities = 300/363 (82%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 185 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 244
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 245 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 304
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 305 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 364
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||| ||||||||||||| | || |
Sbjct: 365 ttgtcgtcgcaggggccgacgcatgatgagatcgacttctagttcctggggaatgtgacc 424
Query: 445 ggggagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcag 504
||||||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| |
Sbjct: 425 ggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatg 484
Query: 505 cagttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaac 564
|||||||| | |||| ||||||||| || ||||||| |||||||| | || ||||||
Sbjct: 485 cagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaac 544
Query: 565 ccc 567
|||
Sbjct: 545 ccc 547
>gb|CB683062.1|CB683062 OSJNEf10P16.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10P16 5', mRNA sequence
Length = 669
Score = 220 bits (111), Expect = 1e-054
Identities = 300/363 (82%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 191 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 250
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 251 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 310
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 311 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 370
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||| ||||||||||||| | || |
Sbjct: 371 ttgtcgtcgcaggggccgacgcatgatgagatcgacttccagttcctggggaatgtgacc 430
Query: 445 ggggagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcag 504
||||||||||||||| ||||||| ||||||| || |||||| ||||| ||| ||| |
Sbjct: 431 ggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggccagcgcgagatg 490
Query: 505 cagttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaac 564
|||||||| | |||| ||||||||| || ||||||| |||||||| | || ||||||
Sbjct: 491 cagttccgcctctggtacgaccccaccaaggacttccacacctactccatcctctggaac 550
Query: 565 ccc 567
|||
Sbjct: 551 ccc 553
>gb|AU222632.1|AU222632 AU222632 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60267, mRNA sequence
Length = 486
Score = 214 bits (108), Expect = 8e-053
Identities = 243/288 (84%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 189 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 248
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 249 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 308
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 309 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 368
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||||||||||||||||| | || |
Sbjct: 369 ttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgacc 428
Query: 445 ggggagccgtacacggtgcacacgaacgtgtacagccaggggaagggc 492
||||||||||||||| ||||||| ||||||| || |||||| |||||
Sbjct: 429 ggggagccgtacacgctgcacaccaacgtgttcacgcaggggcagggc 476
>gb|AU183250.1|AU183250 AU183250 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60366, mRNA sequence
Length = 450
Score = 202 bits (102), Expect = 3e-049
Identities = 222/262 (84%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 189 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 248
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 249 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 308
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 309 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 368
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||||||||||||||||| | || |
Sbjct: 369 ttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgacc 428
Query: 445 ggggagccgtacacggtgcaca 466
||||||||||||||| ||||||
Sbjct: 429 ggggagccgtacacgctgcaca 450
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
insert sequence
Length = 1208
Score = 202 bits (102), Expect = 3e-049
Identities = 231/274 (84%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg 398
|||||||||||| || ||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380
Query: 399 ttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacac 458
|||| ||||| |||||||||||||||||||||||||||| || ||| |||||||||||
Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440
Query: 459 ggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtg 518
| ||||||| ||||||| || |||||| |||| ||| |||||||||||||| | ||
Sbjct: 441 gctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcagttccgcctctg 500
Query: 519 gttcgaccccacggcggccttccacgcctactcc 552
|||||||||||| | |||||||| ||||||||
Sbjct: 501 gttcgaccccacccagtccttccacacctactcc 534
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 634 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 686
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
insert sequence
Length = 1208
Score = 202 bits (102), Expect = 3e-049
Identities = 231/274 (84%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg 398
|||||||||||| || ||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380
Query: 399 ttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacac 458
|||| ||||| |||||||||||||||||||||||||||| || ||| |||||||||||
Sbjct: 381 ttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacac 440
Query: 459 ggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtg 518
| ||||||| ||||||| || |||||| |||| ||| |||||||||||||| | ||
Sbjct: 441 gctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcagttccgcctctg 500
Query: 519 gttcgaccccacggcggccttccacgcctactcc 552
|||||||||||| | |||||||| ||||||||
Sbjct: 501 gttcgaccccacccagtccttccacacctactcc 534
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 634 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 686
>gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H04 3', mRNA sequence
Length = 705
Score = 200 bits (101), Expect = 1e-048
Identities = 158/177 (89%)
Strand = Plus / Minus
Query: 417 cgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgta 476
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 705 cgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgta 646
Query: 477 cagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcggc 536
|||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||
Sbjct: 645 cagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaagga 586
Query: 537 cttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacgg 593
||||||| | |||||||| || ||||||||| ||||| || | ||||||||||||||
Sbjct: 585 cttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgg 529
Score = 81.8 bits (41), Expect = 8e-013
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 650 cgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnn 709
||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 469 cgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcaggggg 410
Query: 710 nncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccg 769
||||| |||| |||||||| |||||| ||| ||||||||||||||| |||||
Sbjct: 409 ggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccg 350
Query: 770 ccaccgggtgcaccgcgccggacgcc 795
| | ||||||||| ||| |||||||
Sbjct: 349 cgagcgggtgcacgtcgcaggacgcc 324
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 882 ctacatgatctacaactactgcaccgataagtaccggttcccgcaggg 929
||||||||||||||| |||||| |||| | |||||||||||| |||||
Sbjct: 234 ctacatgatctacaattactgcgccgacacgtaccggttcccccaggg 187
>gb|AU183242.1|AU183242 AU183242 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60195, mRNA sequence
Length = 447
Score = 190 bits (96), Expect = 1e-045
Identities = 215/255 (84%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 191 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 250
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 251 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 310
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || || |||
Sbjct: 311 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgnctactac 370
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| || |||||||||||||||||||||||||| | || |
Sbjct: 371 ttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgacc 430
Query: 445 ggggagccgtacacg 459
|||||||||||||||
Sbjct: 431 ggggagccgtacacg 445
>gb|AU097516.1|AU097516 AU097516 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5538, mRNA sequence
Length = 385
Score = 188 bits (95), Expect = 5e-045
Identities = 194/227 (85%)
Strand = Plus / Plus
Query: 326 tcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatc 385
||||||||||| ||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 6 tcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctact 65
Query: 386 tttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcg 445
| ||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||
Sbjct: 66 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 125
Query: 446 gggagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagc 505
| |||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||
Sbjct: 126 gcgagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagc 185
Query: 506 agttccggatgtggttcgaccccacggcggccttccacgcctactcc 552
||||||| | |||||||||||||| | |||||||| ||||||||
Sbjct: 186 agttccgcctctggttcgaccccacccagtccttccacacctactcc 232
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 332 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 384
>gb|BP432965.1|BP432965 BP432965 Oryza sativa (japonica cultivar-group) whole plant
seedling Oryza sativa (japonica cultivar-group) cDNA
clone JRC0549, mRNA sequence
Length = 628
Score = 176 bits (89), Expect = 2e-041
Identities = 240/289 (83%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 195 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 254
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 255 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 314
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 315 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 374
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444
| ||||||||||| || ||| ||||||||||||||||||||||||| | || |
Sbjct: 375 ttgtcgtcgcaggggccgacgcatatgaagatcgacttcgagttcctggggaatgtgacc 434
Query: 445 gggg-agccgtacacggtgcacacgaacgtgtacagccaggggaagggc 492
|||| ||||||||||| ||||||| ||||||| || |||||| |||||
Sbjct: 435 ggggaagccgtacacgctgcacaccaacgtgttcacgcaggggcagggc 483
>gb|AU097514.1|AU097514 AU097514 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5527, mRNA sequence
Length = 367
Score = 161 bits (81), Expect = 1e-036
Identities = 168/197 (85%)
Strand = Plus / Plus
Query: 356 actccgccggcaccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgaga 415
||||||||||||||||| |||||||||| | ||||||||||||||| ||||| ||||
Sbjct: 19 actccgccggcaccgtcaccaccttctacttgtcgtcgcagggttcgacccacgatgaga 78
Query: 416 tcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
|||||||||||||||||||||||| || ||| |||||||||||| ||||||| |||||||
Sbjct: 79 tcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcacaccaacgtgt 138
Query: 476 acagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacggcgg 535
|| |||||| |||| ||| |||||||||||||| | |||||||||||||| |
Sbjct: 139 tcacgcaggggcaggggcagcgcgagcagcagttccgcctctggttcgaccccacccagt 198
Query: 536 ccttccacgcctactcc 552
|||||||| ||||||||
Sbjct: 199 ccttccacacctactcc 215
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 652 cagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
|||||||||||||||||||| ||| ||||| ||||||| || ||||| |||||
Sbjct: 315 cagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgca 367
>gb|CF325411.1|CF325411 JMT1--03-C17.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--03-C17, mRNA sequence
Length = 475
Score = 159 bits (80), Expect = 4e-036
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 308 agtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggca 367
|||||||||||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 13 agtacctctacggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggca 72
Query: 368 ccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagt 427
||||| || ||| ||| | ||||||||||| || ||| || ||||||||||||||||
Sbjct: 73 ccgtcaccgcctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagt 132
Query: 428 tcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgtacagccagggga 487
|||||||||| | || |||||||||||||||| ||||||| ||||||| || ||||||
Sbjct: 133 tcctggggaatgtgaccggggagccgtacacgctgcacaccaacgtgttcacgcaggggc 192
Query: 488 agggcgggcgggagcagcagttccggatgtggttcgaccccacggcggccttccacgcct 547
||||| ||| ||| ||||||||| | |||| ||||||||| || ||||||| |||
Sbjct: 193 agggccagcgcgagatgcagttccgcctctggtacgaccccaccaaggacttccacacct 252
Query: 548 actccgtgctgtggaacccc 567
||||| | || |||||||||
Sbjct: 253 actccatcctctggaacccc 272
>gb|AU225192.1|AU225192 AU225192 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0129, mRNA sequence
Length = 426
Score = 157 bits (79), Expect = 2e-035
Identities = 187/223 (83%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 204 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 263
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 264 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 323
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 324 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 383
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagt 427
| ||||||||||| || ||| || ||||||||||||||||
Sbjct: 384 ttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagt 426
>gb|C28350.1|C28350 C28350 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C60796_1A, mRNA sequence
Length = 429
Score = 147 bits (74), Expect = 2e-032
Identities = 194/233 (83%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 179 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 238
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 239 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 298
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384
||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 299 atcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 358
Query: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaa 437
| | |||| |||| || ||| || |||||||| |||||||||||||||||
Sbjct: 359 ttgtggtcgaaggg-ccgacgcatgatgagatcganttcgagttcctggggaa 410
>gb|AU222683.1|AU222683 AU222683 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S0011, mRNA sequence
Length = 290
Score = 137 bits (69), Expect = 2e-029
Identities = 174/208 (83%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||||| | |||||||| || |||||||||||| | |||||||||||||| |||
Sbjct: 20 tggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaagatcg 79
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcacc-gtcgccaccttctatctt 387
|||||||||||||||||||||| || |||||||||||||| ||| || ||| ||| |
Sbjct: 80 acatgcagctcaagctcgtccccggcaactccgccggcacccgtcaccgcctactacttg 139
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||| || ||| || |||||||||||| ||||||||||||| | || ||||
Sbjct: 140 tcgtcgcaggggccgacgcatgatgagatcgacttcnagttcctggggaatgtgaccggg 199
Query: 448 gagccgtacacggtgcacacgaacgtgt 475
|||||||||||| || |||| |||||||
Sbjct: 200 gagccgtacacgctgtacaccaacgtgt 227
>gb|C25186.1|C25186 C25186 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5538_1A, mRNA sequence
Length = 441
Score = 133 bits (67), Expect = 2e-028
Identities = 158/188 (84%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 243 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 302
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg 398
|||||||||||| || ||| ||||||||||||| |||||||||| | | |||||||||
Sbjct: 303 caagctcgtccccggcaactncgccggcaccgtcaccaccttctacttgtngtcgcaggg 362
Query: 399 ttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacac 458
|||| ||||| |||||||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 363 ttcgacccacgatgagatcgacttcgagttcctgggg-acgtgaccggcgagccgtacaa 421
Query: 459 ggtgcaca 466
| ||||||
Sbjct: 422 gntgcaca 429
>gb|AU161551.1|AU161551 AU161551 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S0640, mRNA sequence
Length = 370
Score = 127 bits (64), Expect = 2e-026
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369
||||||| ||||| |||| |||||| ||||||||||| | || |||||||||||||||
Sbjct: 189 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcacc 248
Query: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429
||| || ||||||| || ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 249 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 308
Query: 430 ctggggaacgcgagcggggagccgtaca 457
||||||||| || |||||||||||||
Sbjct: 309 ctggggaacaggacgggggagccgtaca 336
>gb|AU222867.1|AU222867 AU222867 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S1163, mRNA sequence
Length = 461
Score = 127 bits (64), Expect = 2e-026
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369
||||||| ||||| |||| |||||| ||||||||||| | || |||||||||||||||
Sbjct: 234 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcacc 293
Query: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429
||| || ||||||| || ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 294 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 353
Query: 430 ctggggaacgcgagcggggagccgtaca 457
||||||||| || |||||||||||||
Sbjct: 354 ctggggaacaggacgggggagccgtaca 381
>gb|CF325257.1|CF325257 JMT1--02-L23.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--02-L23, mRNA sequence
Length = 562
Score = 127 bits (64), Expect = 2e-026
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369
||||||| ||||| |||| |||||| ||||||||||| | || |||||||||||||||
Sbjct: 156 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcacc 215
Query: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429
||| || ||||||| || ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 216 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 275
Query: 430 ctggggaacgcgagcggggagccgtaca 457
||||||||| || |||||||||||||
Sbjct: 276 ctggggaacaggacgggggagccgtaca 303
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
insert sequence
Length = 1053
Score = 127 bits (64), Expect = 2e-026
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369
||||||| ||||| |||| |||||| ||||||||||| | || |||||||||||||||
Sbjct: 244 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcacc 303
Query: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429
||| || ||||||| || ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 304 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 363
Query: 430 ctggggaacgcgagcggggagccgtaca 457
||||||||| || |||||||||||||
Sbjct: 364 ctggggaacaggacgggggagccgtaca 391
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
insert sequence
Length = 977
Score = 127 bits (64), Expect = 2e-026
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369
||||||| ||||| |||| |||||| ||||||||||| | || |||||||||||||||
Sbjct: 247 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcacc 306
Query: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429
||| || ||||||| || ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 307 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 366
Query: 430 ctggggaacgcgagcggggagccgtaca 457
||||||||| || |||||||||||||
Sbjct: 367 ctggggaacaggacgggggagccgtaca 394
>gb|AU063923.1|AU063923 AU063923 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2104_1A, mRNA sequence
Length = 373
Score = 125 bits (63), Expect = 6e-026
Identities = 141/168 (83%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | ||||| || ||||||||
Sbjct: 188 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccanctgctgacgctc 247
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 248 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 307
Query: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 372
||||||| ||||||||||||||||| || |||||| ||||||||||
Sbjct: 308 atcgacatncagctcaagctcgtccccggcaactccgncggcaccgtc 355
>gb|C25181.1|C25181 C25181 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5527_2A, mRNA sequence
Length = 430
Score = 119 bits (60), Expect = 4e-024
Identities = 133/158 (84%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 237 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 296
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg 398
||||||||| || || ||| ||||||||||||| |||||||||| | |||||| ||||
Sbjct: 297 caagctcgtncccggcaacttcgccggcaccgtcaccaccttctacttgtcgtcgnaggg 356
Query: 399 ttcgcagcacgacgagatcgacttcgagttcctgggga 436
|||| ||||| |||||||||||||||||||||||||
Sbjct: 357 ttcgacccacgatgagatcgacttcgagttcctgggga 394
>gb|AU063993.1|AU063993 AU063993 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2919_1A, mRNA sequence
Length = 362
Score = 117 bits (59), Expect = 1e-023
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 189 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 248
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||||| | |||||||| | |||||||||||| | ||||||||||||||
Sbjct: 249 acgctggacaggacgtccggctcanggttccagtccaagcacgagtacctctacggcaag 308
Query: 325 ttcgacatgcagctcaagctcgtccc 350
|||||||||||||||||||||||||
Sbjct: 309 atcgacatgcagctcaagctcgtccc 334
>gb|D39971.1|D39971 RICS1669A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 423
Score = 115 bits (58), Expect = 6e-023
Identities = 144/170 (84%), Gaps = 2/170 (1%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 186 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 245
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctac-ggccg 323
| |||||||| | |||||||| || |||||||||||| | ||||||||||| |||
Sbjct: 246 acgctggacaggacgtccggctcagggttccagtccaagcacgagtacctctacgggcaa 305
Query: 324 cttcgacatgcagctcaagctcgtcccgggggac-tccgccggcaccgtc 372
||||||||||||||||||||||||| || || |||||||||||||||
Sbjct: 306 gatcgacatgcagctcaagctcgtccccggcaacttccgccggcaccgtc 355
>gb|D40760.1|D40760 RICS2904A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 333
Score = 115 bits (58), Expect = 6e-023
Identities = 123/145 (84%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 189 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 248
Query: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324
| |||||| | | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 249 acgctggacangacgtccggctcagggttccagtccaagcacgagtacctctacggcaag 308
Query: 325 ttcgacatgcagctcaagctcgtcc 349
||||||||||||||||||||||||
Sbjct: 309 atcgacatgcagctcaagctcgtcc 333
>gb|AU063995.2|AU063995 AU063995 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2926_1A, mRNA sequence
Length = 346
Score = 115 bits (58), Expect = 6e-023
Identities = 128/150 (85%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264
||||||||||||||||| ||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 189 gacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgctgacgctc 248
Query: 265 tc-catggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccg 323
| | ||||||| | |||||||| || |||||||||||| | ||||||||||||||
Sbjct: 249 acgctgggacaggacgtccggctcagggttccagtccaagcacgagtacctctacggcaa 308
Query: 324 cttcgacatgcagctcaagctcgtcccggg 353
||||||||||||||||||||||||||||
Sbjct: 309 gatcgacatgcagctcaagctcgtcccggg 338
>gb|AY873214.1|AY873214 04ET3_387_C_072_000_001C08 Oryza sativa (japonica cultivar-group)
transposon insertional mutants Oryza sativa (japonica
cultivar-group) genomic clone
04ET3_387_C_072_000_001C08, DNA sequence
Length = 612
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Plus
Query: 388 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 447
||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct: 468 tcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggc 527
Query: 448 gagccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcag 507
|||||||||||| ||||||| ||||||| || |||||| |||| ||| |||||||||
Sbjct: 528 gagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcag 587
Query: 508 ttccg 512
|||||
Sbjct: 588 ttccg 592
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 279 ctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagct 338
||||||||| || |||||||||||| | ||||||||| |||| ||||||||||| |
Sbjct: 225 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 284
Query: 339 caagctcgtcccgggggactccgccggcaccgtcgccaccttcta 383
|||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 285 caagctcgtccccggcaactccgccggcaccgtcaccaccttcta 329
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full
insert sequence
Length = 1234
Score = 107 bits (54), Expect = 1e-020
Identities = 162/198 (81%)
Strand = Plus / Plus
Query: 278 cctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagc 337
|||||||||| || ||||||||||||| ||||| ||||| |||| ||| |||| ||
Sbjct: 277 cctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggaga 336
Query: 338 tcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagg 397
| ||||||||||| || || || ||||||| |||||||||||||| || | ||| |||
Sbjct: 337 tgaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggagg 396
Query: 398 gttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtaca 457
| ||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 397 gagatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacg 456
Query: 458 cggtgcacacgaacgtgt 475
| ||||||| |||||||
Sbjct: 457 tgatgcacaccaacgtgt 474
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 966
Score = 107 bits (54), Expect = 1e-020
Identities = 162/198 (81%)
Strand = Plus / Plus
Query: 278 cctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagc 337
|||||||||| || ||||||||||||| ||||| ||||| |||| ||| |||| ||
Sbjct: 209 cctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggaga 268
Query: 338 tcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagg 397
| ||||||||||| || || || ||||||| |||||||||||||| || | ||| |||
Sbjct: 269 tgaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggagg 328
Query: 398 gttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtaca 457
| ||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 329 gagatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacg 388
Query: 458 cggtgcacacgaacgtgt 475
| ||||||| |||||||
Sbjct: 389 tgatgcacaccaacgtgt 406
>gb|D39510.1|D39510 RICS0891A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 201
Score = 101 bits (51), Expect = 9e-019
Identities = 136/164 (82%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369
||||||| ||||| |||| |||||| ||||||||||| | || |||||||||| ||||
Sbjct: 15 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccg-cacc 73
Query: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429
||| || ||||||| || ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 74 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 133
Query: 430 ctggggaacgcgagcggggagccgtacacggtgcacacgaacgt 473
||| ||||| || ||||||||||||| | || ||||||||
Sbjct: 134 ctgnggaacaggacgggggagccgtacatcctncanacgaacgt 177
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,210,415
Number of Sequences: 438736
Number of extensions: 2210415
Number of successful extensions: 50710
Number of sequences better than 0.5: 299
Number of HSP's better than 0.5 without gapping: 344
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 38480
Number of HSP's gapped (non-prelim): 11687
length of query: 1223
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1202
effective length of database: 2,791,206,460
effective search space: 3355030164920
effective search space used: 3355030164920
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)