BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4CL
(1986 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_482683.1| Oryza sativa (japonica cultivar-group), mRNA 1033 0.0
dbj|AK120964.1| Oryza sativa (japonica cultivar-group) cDNA... 1025 0.0
dbj|AP004558.3| Oryza sativa (japonica cultivar-group) geno... 422 e-115
dbj|AP004665.4| Oryza sativa (japonica cultivar-group) geno... 422 e-115
gb|AACV01018590.1| Oryza sativa (japonica cultivar-group) c... 422 e-115
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 422 e-115
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 422 e-115
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 422 e-115
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 422 e-115
dbj|AK069932.1| Oryza sativa (japonica cultivar-group) cDNA... 258 1e-065
ref|XM_480952.1| Oryza sativa (japonica cultivar-group), mRNA 258 1e-065
dbj|AK105636.1| Oryza sativa (japonica cultivar-group) cDNA... 198 8e-048
ref|XM_467290.1| Oryza sativa (japonica cultivar-group), mRNA 198 8e-048
gb|CB684593.1|CB684593 OSJNEf14E12.f OSJNEf Oryza sativa (j... 176 3e-041
dbj|AK070083.1| Oryza sativa (japonica cultivar-group) cDNA... 176 3e-041
gb|D41112.1|D41112 RICS3391A Rice shoot Oryza sativa (japon... 157 3e-035
gb|D47966.1|D47966 RICS13787A Rice green shoot Oryza sativa... 149 7e-033
gb|CB653843.1|CB653843 OSJNEc05E03.r OSJNEc Oryza sativa (j... 149 7e-033
gb|CB654031.1|CB654031 OSJNEc05J16.r OSJNEc Oryza sativa (j... 149 7e-033
gb|CB655489.1|CB655489 OSJNEc08P15.r OSJNEc Oryza sativa (j... 149 7e-033
gb|CB676498.1|CB676498 OSJNEe12M15.r OSJNEe Oryza sativa (j... 149 7e-033
gb|CB684594.1|CB684594 OSJNEf14E12.r OSJNEf Oryza sativa (j... 149 7e-033
dbj|AP004115.1| Oryza sativa (japonica cultivar-group) chro... 149 7e-033
dbj|AP004838.3| Oryza sativa (japonica cultivar-group) geno... 149 7e-033
gb|AACV01003472.1| Oryza sativa (japonica cultivar-group) c... 149 7e-033
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 149 7e-033
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 149 7e-033
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 149 7e-033
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 149 7e-033
gb|CB000351.1|CB000351 S345U_D03 Rice cold stress germinati... 147 3e-032
gb|D41049.1|D41049 RICS3310A Rice shoot Oryza sativa (japon... 145 1e-031
gb|D41813.1|D41813 RICS4636A Rice shoot Oryza sativa (japon... 145 1e-031
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 129 6e-027
dbj|AP004778.3| Oryza sativa (japonica cultivar-group) geno... 129 6e-027
dbj|AP005868.3| Oryza sativa (japonica cultivar-group) geno... 129 6e-027
gb|AACV01017731.1| Oryza sativa (japonica cultivar-group) c... 117 2e-023
dbj|AP003859.2| Oryza sativa (japonica cultivar-group) geno... 117 2e-023
emb|X52623.1|OS4CL Rice 4-CL gene for 4-coumarate-CoA ligas... 111 1e-021
gb|AACV01009260.1| Oryza sativa (japonica cultivar-group) c... 109 6e-021
ref|XM_471766.1| Oryza sativa (japonica cultivar-group), p... 109 6e-021
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 109 6e-021
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 109 6e-021
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 109 6e-021
emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromoso... 109 6e-021
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 109 6e-021
gb|CB660533.1|CB660533 OSJNEd02G15.f OSJNEd Oryza sativa (j... 100 6e-018
gb|CB660534.1|CB660534 OSJNEd02G15.r OSJNEd Oryza sativa (j... 100 6e-018
gb|CB667032.1|CB667032 OSJNEd14C22.r OSJNEd Oryza sativa (j... 100 6e-018
gb|CB669744.1|CB669744 OSJNEe02H12.r OSJNEe Oryza sativa (j... 100 6e-018
gb|CB673005.1|CB673005 OSJNEe07F05.r OSJNEe Oryza sativa (j... 100 6e-018
dbj|AK068985.1| Oryza sativa (japonica cultivar-group) cDNA... 100 6e-018
gb|CB654377.1|CB654377 OSJNEc06K19.r OSJNEc Oryza sativa (j... 98 2e-017
dbj|AP004690.3| Oryza sativa (japonica cultivar-group) geno... 94 3e-016
gb|CB655451.1|CB655451 OSJNEc08O09.r OSJNEc Oryza sativa (j... 92 1e-015
gb|CB656113.1|CB656113 OSJNEc10B07.r OSJNEc Oryza sativa (j... 92 1e-015
gb|CB664984.1|CB664984 OSJNEd11A15.r OSJNEd Oryza sativa (j... 92 1e-015
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 92 1e-015
dbj|AP003712.4| Oryza sativa (japonica cultivar-group) geno... 92 1e-015
gb|AACV01014711.1| Oryza sativa (japonica cultivar-group) c... 92 1e-015
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 92 1e-015
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 92 1e-015
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 92 1e-015
gb|CB663059.1|CB663059 OSJNEd07J18.r OSJNEd Oryza sativa (j... 88 2e-014
gb|CB655450.1|CB655450 OSJNEc08O09.f OSJNEc Oryza sativa (j... 86 9e-014
gb|CB655488.1|CB655488 OSJNEc08P15.f OSJNEc Oryza sativa (j... 72 1e-009
gb|CV152484.1|CV152484 LS361-S.SEQ Cold stressed rice cDNA ... 68 2e-008
gb|AACV01005227.1| Oryza sativa (japonica cultivar-group) c... 68 2e-008
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 68 2e-008
gb|AU096471.1|AU096471 AU096471 Rice green shoot Oryza sati... 64 3e-007
gb|AU225532.1|AU225532 AU225532 Oryza sativa Koshihikari pi... 62 1e-006
gb|AU161971.1|AU161971 AU161971 Rice shoot Oryza sativa (ja... 60 5e-006
gb|AU161713.1|AU161713 AU161713 Rice shoot Oryza sativa (ja... 58 2e-005
gb|AU174808.1|AU174808 AU174808 Rice cDNA from leaf Oryza s... 58 2e-005
gb|CB667031.1|CB667031 OSJNEd14C22.f OSJNEd Oryza sativa (j... 58 2e-005
gb|CV722521.1|CV722521 YTPSP--01-K02.b1 TPSP-overexpression... 58 2e-005
dbj|AK067261.1| Oryza sativa (japonica cultivar-group) cDNA... 58 2e-005
gb|CB638383.1|CB638383 OSJNEa06J20.f OSJNEa Oryza sativa (j... 54 3e-004
dbj|AK105769.1| Oryza sativa (japonica cultivar-group) cDNA... 54 3e-004
dbj|AK107421.1| Oryza sativa (japonica cultivar-group) cDNA... 54 3e-004
dbj|AK121384.1| Oryza sativa (japonica cultivar-group) cDNA... 54 3e-004
gb|AC098693.2| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|AACV01005814.1| Oryza sativa (japonica cultivar-group) c... 54 3e-004
ref|XM_470183.1| Oryza sativa (japonica cultivar-group), p... 54 3e-004
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 54 3e-004
gb|AC140005.2| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CV722651.1|CV722651 root--01-C15.g1 Rice root lambda pha... 52 0.001
gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbar... 52 0.001
gb|AC134233.3| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|AACV01005226.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01005890.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|CB641159.1|CB641159 OSJNEa18B09.f OSJNEa Oryza sativa (j... 50 0.005
dbj|AP003045.2| Oryza sativa (japonica cultivar-group) geno... 48 0.019
dbj|AP003225.3| Oryza sativa (japonica cultivar-group) geno... 48 0.019
gb|AACV01000221.1| Oryza sativa (japonica cultivar-group) c... 48 0.019
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 48 0.019
ref|NM_184423.1| Oryza sativa (japonica cultivar-group), p... 48 0.019
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 48 0.019
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.019
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.019
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 48 0.019
gb|CB653842.1|CB653842 OSJNEc05E03.f OSJNEc Oryza sativa (j... 46 0.073
gb|CB654030.1|CB654030 OSJNEc05J16.f OSJNEc Oryza sativa (j... 46 0.073
gb|AACV01018410.1| Oryza sativa (japonica cultivar-group) c... 46 0.073
ref|XM_482238.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.073
dbj|AP004137.3| Oryza sativa (japonica cultivar-group) geno... 46 0.073
dbj|AP003947.3| Oryza sativa (japonica cultivar-group) geno... 46 0.073
gb|D41388.1|D41388 RICS3867A Rice shoot Oryza sativa (japon... 44 0.29
gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21... 44 0.29
gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11... 44 0.29
gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbar... 44 0.29
gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbar... 44 0.29
gb|AACV01006092.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01016881.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01021429.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01022022.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01026033.1| Oryza sativa (japonica cultivar-group) C... 44 0.29
ref|NM_196220.1| Oryza sativa (japonica cultivar-group) hyp... 44 0.29
ref|NM_197583.1| Oryza sativa (japonica cultivar-group) hyp... 44 0.29
ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chr... 44 0.29
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 44 0.29
ref|XM_479281.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 44 0.29
dbj|AP005292.5| Oryza sativa (japonica cultivar-group) geno... 44 0.29
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.29
gb|CH401392.1| Oryza sativa (japonica cultivar-group) scaff... 44 0.29
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.29
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.29
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.29
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.29
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.29
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.29
gb|AC091732.4| Oryza sativa (japonica cultivar-group) chrom... 44 0.29
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.29
gb|CB654376.1|CB654376 OSJNEc06K19.f OSJNEc Oryza sativa (j... 42 1.1
dbj|AP000615.1| Oryza sativa (japonica cultivar-group) geno... 42 1.1
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 42 1.1
dbj|AK109604.1| Oryza sativa (japonica cultivar-group) cDNA... 42 1.1
dbj|AK110783.1| Oryza sativa (japonica cultivar-group) cDNA... 42 1.1
gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-grou... 42 1.1
gb|AC073392.3| Oryza sativa (japonica cultivar-group) chrom... 42 1.1
gb|AC099401.2| Oryza sativa (japonica cultivar-group) chrom... 42 1.1
gb|AC144736.2| Oryza sativa (japonica cultivar-group) chrom... 42 1.1
dbj|AP005409.4| Oryza sativa (japonica cultivar-group) geno... 42 1.1
dbj|AP005454.4| Oryza sativa (japonica cultivar-group) geno... 42 1.1
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 42 1.1
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 42 1.1
dbj|AP003204.3| Oryza sativa (japonica cultivar-group) geno... 42 1.1
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 42 1.1
gb|AACV01000217.1| Oryza sativa (japonica cultivar-group) c... 42 1.1
gb|AACV01005801.1| Oryza sativa (japonica cultivar-group) c... 42 1.1
gb|AACV01009508.1| Oryza sativa (japonica cultivar-group) c... 42 1.1
gb|AACV01015031.1| Oryza sativa (japonica cultivar-group) c... 42 1.1
gb|AACV01015209.1| Oryza sativa (japonica cultivar-group) c... 42 1.1
gb|AACV01015217.1| Oryza sativa (japonica cultivar-group) c... 42 1.1
gb|AACV01021583.1| Oryza sativa (japonica cultivar-group) c... 42 1.1
gb|AACV01026136.1| Oryza sativa (japonica cultivar-group) C... 42 1.1
gb|AACV01026809.1| Oryza sativa (japonica cultivar-group) C... 42 1.1
gb|AACV01027243.1| Oryza sativa (japonica cultivar-group) C... 42 1.1
gb|AACV01028117.1| Oryza sativa (japonica cultivar-group) C... 42 1.1
gb|AACV01028854.1| Oryza sativa (japonica cultivar-group) C... 42 1.1
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 42 1.1
ref|XM_476391.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 42 1.1
ref|NT_079947.2| Oryza sativa (japonica cultivar-group) 42 1.1
ref|NT_107229.1| Oryza sativa (japonica cultivar-group) 42 1.1
ref|XM_493818.1| Oryza sativa (japonica cultivar-group), p... 42 1.1
tpe|BN000628.1| TPA: Oryza sativa (japonica cultivar-group)... 42 1.1
ref|NM_184413.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 42 1.1
gb|CH401608.1| Oryza sativa (japonica cultivar-group) scaff... 42 1.1
gb|CH401423.1| Oryza sativa (japonica cultivar-group) scaff... 42 1.1
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 42 1.1
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 42 1.1
emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromoso... 42 1.1
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 42 1.1
gb|AQ328996.1|AQ328996 nbxb0044M21f CUGI Rice BAC Library O... 40 4.5
gb|CZ558902.1|CZ558902 M0051860 AS_TRIM_TDNA_B1 Oryza sativ... 40 4.5
gb|AU184583.1|AU184583 AU184583 Rice root Oryza sativa (jap... 40 4.5
gb|AU223467.1|AU223467 AU223467 Rice shoot Oryza sativa (ja... 40 4.5
gb|CB647131.1|CB647131 OSJNEb09O19.f OSJNEb Oryza sativa (j... 40 4.5
dbj|AP003998.1| Oryza sativa (japonica cultivar-group) chro... 40 4.5
dbj|AK059638.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK065095.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK072492.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK074022.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK099263.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK099265.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK108550.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK108930.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK110325.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
dbj|AK121604.1| Oryza sativa (japonica cultivar-group) cDNA... 40 4.5
emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC O... 40 4.5
gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09... 40 4.5
emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromoso... 40 4.5
dbj|AP005542.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP004381.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP005455.5| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP004811.2| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP005477.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 40 4.5
dbj|AP005289.2| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP005518.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
gb|AC150788.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01002436.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01002571.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01003125.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01005769.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01007655.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01008893.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01010199.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01010674.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01013437.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01013779.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01016905.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01019159.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01019917.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01023844.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01025155.1| Oryza sativa (japonica cultivar-group) c... 40 4.5
gb|AACV01027953.1| Oryza sativa (japonica cultivar-group) C... 40 4.5
gb|AACV01028383.1| Oryza sativa (japonica cultivar-group) C... 40 4.5
gb|AACV01028714.1| Oryza sativa (japonica cultivar-group) C... 40 4.5
gb|AACV01031891.1| Oryza sativa (japonica cultivar-group) C... 40 4.5
gb|AACV01033447.1| Oryza sativa (japonica cultivar-group) C... 40 4.5
dbj|AP003457.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
ref|NM_189484.1| Oryza sativa (japonica cultivar-group), p... 40 4.5
ref|NM_191080.1| Oryza sativa (japonica cultivar-group), p... 40 4.5
ref|NM_191448.1| Oryza sativa (japonica cultivar-group), p... 40 4.5
ref|NM_192094.1| Oryza sativa (japonica cultivar-group), p... 40 4.5
ref|XM_450166.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
ref|XM_450167.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
ref|XM_467145.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
ref|XM_473336.1| Oryza sativa (japonica cultivar-group), p... 40 4.5
ref|XM_474414.1| Oryza sativa (japonica cultivar-group), p... 40 4.5
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_079867.2| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_107076.1| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 40 4.5
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 40 4.5
dbj|AP005582.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP005583.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP005072.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 40 4.5
dbj|AP003255.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP003265.4| Oryza sativa (japonica cultivar-group) geno... 40 4.5
gb|AC134236.4| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP003298.3| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP003411.4| Oryza sativa (japonica cultivar-group) geno... 40 4.5
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401232.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401188.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromoso... 40 4.5
emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromoso... 40 4.5
emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromoso... 40 4.5
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 40 4.5
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 40 4.5
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 40 4.5
>ref|XM_482683.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1979
Score = 1033 bits (521), Expect = 0.0
Identities = 944/1085 (87%)
Strand = Plus / Plus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 620 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 679
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 680 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 739
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 740 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 799
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 800 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 859
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 860 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 919
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 920 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 979
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 980 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 1039
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagggttatgggatg 1179
|| |||||| | | | |||||||||||| |||||| ||||||||||| || ||||||
Sbjct: 1040 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacaggggtacgggatg 1099
Query: 1180 acagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccggtg 1239
|| |||||||| |||||||| || |||||||||||||| || ||||||||| ||||||
Sbjct: 1100 acggaggcagggccggtgctatcaatgtgcatggcgttcgcgaaggagccgacgccggtg 1159
Query: 1240 aagtccggtgcctgcggcacggtggtgaggaatgccgagctaaagatcatcgacccggag 1299
|||||||| || ||||||||||||||| |||| |||||||| |||||| ||||||||||
Sbjct: 1160 aagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaagatcgtcgacccggac 1219
Query: 1300 accgggctgtccctccaccgcaaccagcccggggagatttgcatcaggggcaagcagttg 1359
||||| |||| |||| ||||||||||| |||||||||||||||||||| || || |
Sbjct: 1220 accggcttgtcactcccgcgcaaccagccgggggagatttgcatcaggggaaaacaaatc 1279
Query: 1360 atgaaagggtacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtgg 1419
|||||||| ||||| |||||||||||||| || | |||||| |||||| ||| ||||||
Sbjct: 1280 atgaaaggatacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtgg 1339
Query: 1420 ctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccgg 1479
|||||||| || ||||| || | ||||||||||| |||||||||||||||||| ||||||
Sbjct: 1340 ctgcacactggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccgg 1399
Query: 1480 ctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatg 1539
|||||||||||||||||||||||||| ||||| ||||| || || |||||||||||||||
Sbjct: 1400 ctcaaggagctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatg 1459
Query: 1540 ctcatcgcccaccccagcatcgtcgacgccgccgtcgtccaaatgaaggatgactcctgc 1599
|||||||||||| || | ||| ||||||||||||||||| ||||||||| || ||||||
Sbjct: 1460 ctcatcgcccacgccgccgtcgccgacgccgccgtcgtcccaatgaaggacgattcctgc 1519
Query: 1600 ggcgagatcccggtggcgttcgtcgtggcgtccggcggctccgggatcaccgaggacgag 1659
||||||||||| |||||||||||||| || || |||||| ||||||||||| ||||||
Sbjct: 1520 ggcgagatcccagtggcgttcgtcgtcgcacgcgacggctcggggatcaccgacgacgag 1579
Query: 1660 atcaagcagtacgtggcgaaacaggtggtgttctacaagaggctgcacaagatcttcttc 1719
|||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1580 atcaagcagtacgtcgcaaagcaggtggtgttctacaagaggctgcacaagatcttcttc 1639
Query: 1720 gtggaggccatccccaaggcgccatccggcaagattttaaggaaggatctgagagcaaag 1779
||||| || ||||| |||||||| || || |||||||| |||||||||||||||||||||
Sbjct: 1640 gtggacgcaatcccgaaggcgccgtcgggaaagattttgaggaaggatctgagagcaaag 1699
Query: 1780 ctggc 1784
||||
Sbjct: 1700 ttggc 1704
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Plus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 338 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 397
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 398 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 457
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 458 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 517
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 518 ggcctcgcgggcgtgaccgtcgtcgccac 546
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Plus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 134 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 193
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 194 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 253
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 254 acgctctcgttcggcgacgt 273
>dbj|AK120964.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040C04, full
insert sequence
Length = 1979
Score = 1025 bits (517), Expect = 0.0
Identities = 943/1085 (86%)
Strand = Plus / Plus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 620 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 679
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 680 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 739
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 740 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 799
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 800 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 859
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 860 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 919
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 920 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 979
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 980 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 1039
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagggttatgggatg 1179
|| |||||| | | | |||||||||||| |||||| ||||||||||| || ||||||
Sbjct: 1040 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacaggggtacgggatg 1099
Query: 1180 acagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccggtg 1239
|| |||||||| |||||||| || |||||||||||||| || ||||||||| ||||||
Sbjct: 1100 acggaggcagggccggtgctatcaatgtgcatggcgttcgcgaaggagccgacgccggtg 1159
Query: 1240 aagtccggtgcctgcggcacggtggtgaggaatgccgagctaaagatcatcgacccggag 1299
|||||||| || ||||||||||||||| |||| |||||||| |||||| ||||||||||
Sbjct: 1160 aagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaagatcgtcgacccggac 1219
Query: 1300 accgggctgtccctccaccgcaaccagcccggggagatttgcatcaggggcaagcagttg 1359
||||| |||| |||| ||||||||||| |||||||||||||||||||| || || |
Sbjct: 1220 accggcttgtcactcccgcgcaaccagccgggggagatttgcatcaggggaaaacaaatc 1279
Query: 1360 atgaaagggtacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtgg 1419
||||| || ||||| |||||||||||||| || | |||||| |||||| ||| ||||||
Sbjct: 1280 atgaagggatacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtgg 1339
Query: 1420 ctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccgg 1479
|||||||| || ||||| || | ||||||||||| |||||||||||||||||| ||||||
Sbjct: 1340 ctgcacactggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccgg 1399
Query: 1480 ctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatg 1539
|||||||||||||||||||||||||| ||||| ||||| || || |||||||||||||||
Sbjct: 1400 ctcaaggagctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatg 1459
Query: 1540 ctcatcgcccaccccagcatcgtcgacgccgccgtcgtccaaatgaaggatgactcctgc 1599
|||||||||||| || | ||| ||||||||||||||||| ||||||||| || ||||||
Sbjct: 1460 ctcatcgcccacgccgccgtcgccgacgccgccgtcgtcccaatgaaggacgattcctgc 1519
Query: 1600 ggcgagatcccggtggcgttcgtcgtggcgtccggcggctccgggatcaccgaggacgag 1659
||||||||||| |||||||||||||| || || |||||| ||||||||||| ||||||
Sbjct: 1520 ggcgagatcccagtggcgttcgtcgtcgcacgcgacggctcggggatcaccgacgacgag 1579
Query: 1660 atcaagcagtacgtggcgaaacaggtggtgttctacaagaggctgcacaagatcttcttc 1719
|||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1580 atcaagcagtacgtcgcaaagcaggtggtgttctacaagaggctgcacaagatcttcttc 1639
Query: 1720 gtggaggccatccccaaggcgccatccggcaagattttaaggaaggatctgagagcaaag 1779
||||| || ||||| |||||||| || || |||||||| |||||||||||||||||||||
Sbjct: 1640 gtggacgcaatcccgaaggcgccgtcgggaaagattttgaggaaggatctgagagcaaag 1699
Query: 1780 ctggc 1784
||||
Sbjct: 1700 ttggc 1704
Score = 161 bits (81), Expect = 2e-036
Identities = 177/209 (84%)
Strand = Plus / Plus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 338 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 397
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 398 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 457
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 458 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 517
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| || || ||||| |||||||||||||
Sbjct: 518 ggccttgcgggcgtgaccgtcgtcgccac 546
Score = 127 bits (64), Expect = 3e-026
Identities = 121/140 (86%)
Strand = Plus / Plus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 134 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 193
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||| ||| || ||||| ||||| ||||||||||| ||
Sbjct: 194 ttcgagcgcctcgccgaccgccgcggccgggcatgccttatcgatggcgccacgggggag 253
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 254 acgctctcgttcggcgacgt 273
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0409A07
Length = 146663
Score = 422 bits (213), Expect = e-115
Identities = 405/469 (86%)
Strand = Plus / Minus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 68307 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 68248
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 68247 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 68188
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 68187 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 68128
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 68127 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 68068
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 68067 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 68008
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 68007 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 67948
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 67947 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 67888
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagg 1168
|| |||||| | | | |||||||||||| |||||| ||||||||||
Sbjct: 67887 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacagg 67839
Score = 220 bits (111), Expect = 2e-054
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||||||||| || | |||||| |||||| ||| ||||||||||||||
Sbjct: 67411 tacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtggctgcacact 67352
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 67351 ggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccggctcaaggag 67292
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 67291 ctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatgctcatcgcc 67232
Query: 1549 caccccagcatcgtcgacgccgccgtcgtcc 1579
||| || | ||| |||||||||||||||||
Sbjct: 67231 cacgccgccgtcgccgacgccgccgtcgtcc 67201
Score = 176 bits (89), Expect = 3e-041
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| |||||||| |||||||| || |||||||||||||| || |||
Sbjct: 67747 caggggtacgggatgacggaggcagggccggtgctatcaatgtgcatggcgttcgcgaag 67688
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||||||||||||| || ||||||||||||||| |||| |||||||| |||
Sbjct: 67687 gagccgacgccggtgaagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaag 67628
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||| |||||||||| ||||| |||| |||| ||||||||||| |||||||||||||||
Sbjct: 67627 atcgtcgacccggacaccggcttgtcactcccgcgcaaccagccgggggagatttgcatc 67568
Query: 1345 agggg 1349
|||||
Sbjct: 67567 agggg 67563
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 68589 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 68530
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 68529 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 68470
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 68469 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 68410
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 68409 ggcctcgcgggcgtgaccgtcgtcgccac 68381
Score = 143 bits (72), Expect = 4e-031
Identities = 96/104 (92%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaagatcttcttcgtggaggccatccccaaggcg 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 66882 caggtggtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcg 66823
Query: 1741 ccatccggcaagattttaaggaaggatctgagagcaaagctggc 1784
|| || || |||||||| ||||||||||||||||||||| ||||
Sbjct: 66822 ccgtcgggaaagattttgaggaaggatctgagagcaaagttggc 66779
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 68793 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 68734
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 68733 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 68674
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 68673 acgctctcgttcggcgacgt 68654
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1581 aatgaaggatgactcctgcggcgagatcccggtggcgttcgtcgtggcgtccggcggctc 1640
||||||||| || ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 67082 aatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtcgcacgcgacggctc 67023
Query: 1641 cgggatcaccgaggacgagatcaagcagtacgtggcgaaacaggtg 1686
||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 67022 ggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg 66977
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0429B05
Length = 155024
Score = 422 bits (213), Expect = e-115
Identities = 405/469 (86%)
Strand = Plus / Minus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 147221 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 147162
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 147161 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 147102
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 147101 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 147042
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 147041 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 146982
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 146981 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 146922
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 146921 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 146862
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 146861 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 146802
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagg 1168
|| |||||| | | | |||||||||||| |||||| ||||||||||
Sbjct: 146801 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacagg 146753
Score = 220 bits (111), Expect = 2e-054
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||||||||| || | |||||| |||||| ||| ||||||||||||||
Sbjct: 146325 tacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtggctgcacact 146266
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 146265 ggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccggctcaaggag 146206
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 146205 ctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatgctcatcgcc 146146
Query: 1549 caccccagcatcgtcgacgccgccgtcgtcc 1579
||| || | ||| |||||||||||||||||
Sbjct: 146145 cacgccgccgtcgccgacgccgccgtcgtcc 146115
Score = 176 bits (89), Expect = 3e-041
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| |||||||| |||||||| || |||||||||||||| || |||
Sbjct: 146661 caggggtacgggatgacggaggcagggccggtgctatcaatgtgcatggcgttcgcgaag 146602
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||||||||||||| || ||||||||||||||| |||| |||||||| |||
Sbjct: 146601 gagccgacgccggtgaagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaag 146542
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||| |||||||||| ||||| |||| |||| ||||||||||| |||||||||||||||
Sbjct: 146541 atcgtcgacccggacaccggcttgtcactcccgcgcaaccagccgggggagatttgcatc 146482
Query: 1345 agggg 1349
|||||
Sbjct: 146481 agggg 146477
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 147503 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 147444
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 147443 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 147384
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 147383 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 147324
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 147323 ggcctcgcgggcgtgaccgtcgtcgccac 147295
Score = 143 bits (72), Expect = 4e-031
Identities = 96/104 (92%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaagatcttcttcgtggaggccatccccaaggcg 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 145796 caggtggtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcg 145737
Query: 1741 ccatccggcaagattttaaggaaggatctgagagcaaagctggc 1784
|| || || |||||||| ||||||||||||||||||||| ||||
Sbjct: 145736 ccgtcgggaaagattttgaggaaggatctgagagcaaagttggc 145693
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 147707 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 147648
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 147647 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 147588
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 147587 acgctctcgttcggcgacgt 147568
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1581 aatgaaggatgactcctgcggcgagatcccggtggcgttcgtcgtggcgtccggcggctc 1640
||||||||| || ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 145996 aatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtcgcacgcgacggctc 145937
Query: 1641 cgggatcaccgaggacgagatcaagcagtacgtggcgaaacaggtg 1686
||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 145936 ggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg 145891
>gb|AACV01018590.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018590, whole
genome shotgun sequence
Length = 19294
Score = 422 bits (213), Expect = e-115
Identities = 405/469 (86%)
Strand = Plus / Minus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 10833 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 10774
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 10773 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 10714
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 10713 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 10654
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 10653 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 10594
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 10593 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 10534
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 10533 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 10474
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 10473 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 10414
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagg 1168
|| |||||| | | | |||||||||||| |||||| ||||||||||
Sbjct: 10413 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacagg 10365
Score = 220 bits (111), Expect = 2e-054
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||||||||| || | |||||| |||||| ||| ||||||||||||||
Sbjct: 9937 tacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtggctgcacact 9878
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 9877 ggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccggctcaaggag 9818
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 9817 ctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatgctcatcgcc 9758
Query: 1549 caccccagcatcgtcgacgccgccgtcgtcc 1579
||| || | ||| |||||||||||||||||
Sbjct: 9757 cacgccgccgtcgccgacgccgccgtcgtcc 9727
Score = 176 bits (89), Expect = 3e-041
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| |||||||| |||||||| || |||||||||||||| || |||
Sbjct: 10273 caggggtacgggatgacggaggcagggccggtgctatcaatgtgcatggcgttcgcgaag 10214
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||||||||||||| || ||||||||||||||| |||| |||||||| |||
Sbjct: 10213 gagccgacgccggtgaagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaag 10154
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||| |||||||||| ||||| |||| |||| ||||||||||| |||||||||||||||
Sbjct: 10153 atcgtcgacccggacaccggcttgtcactcccgcgcaaccagccgggggagatttgcatc 10094
Query: 1345 agggg 1349
|||||
Sbjct: 10093 agggg 10089
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 11115 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 11056
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 11055 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 10996
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 10995 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 10936
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 10935 ggcctcgcgggcgtgaccgtcgtcgccac 10907
Score = 143 bits (72), Expect = 4e-031
Identities = 96/104 (92%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaagatcttcttcgtggaggccatccccaaggcg 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 9408 caggtggtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcg 9349
Query: 1741 ccatccggcaagattttaaggaaggatctgagagcaaagctggc 1784
|| || || |||||||| ||||||||||||||||||||| ||||
Sbjct: 9348 ccgtcgggaaagattttgaggaaggatctgagagcaaagttggc 9305
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 11319 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 11260
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 11259 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 11200
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 11199 acgctctcgttcggcgacgt 11180
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1581 aatgaaggatgactcctgcggcgagatcccggtggcgttcgtcgtggcgtccggcggctc 1640
||||||||| || ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 9608 aatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtcgcacgcgacggctc 9549
Query: 1641 cgggatcaccgaggacgagatcaagcagtacgtggcgaaacaggtg 1686
||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 9548 ggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg 9503
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 422 bits (213), Expect = e-115
Identities = 405/469 (86%)
Strand = Plus / Minus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 21629551 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 21629492
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 21629491 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 21629432
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 21629431 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 21629372
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 21629371 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 21629312
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 21629311 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 21629252
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 21629251 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 21629192
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 21629191 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 21629132
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagg 1168
|| |||||| | | | |||||||||||| |||||| ||||||||||
Sbjct: 21629131 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacagg 21629083
Score = 220 bits (111), Expect = 2e-054
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||||||||| || | |||||| |||||| ||| ||||||||||||||
Sbjct: 21628655 tacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtggctgcacact 21628596
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 21628595 ggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccggctcaaggag 21628536
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 21628535 ctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatgctcatcgcc 21628476
Query: 1549 caccccagcatcgtcgacgccgccgtcgtcc 1579
||| || | ||| |||||||||||||||||
Sbjct: 21628475 cacgccgccgtcgccgacgccgccgtcgtcc 21628445
Score = 176 bits (89), Expect = 3e-041
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| |||||||| |||||||| || |||||||||||||| || |||
Sbjct: 21628991 caggggtacgggatgacggaggcagggccggtgctatcaatgtgcatggcgttcgcgaag 21628932
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||||||||||||| || ||||||||||||||| |||| |||||||| |||
Sbjct: 21628931 gagccgacgccggtgaagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaag 21628872
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||| |||||||||| ||||| |||| |||| ||||||||||| |||||||||||||||
Sbjct: 21628871 atcgtcgacccggacaccggcttgtcactcccgcgcaaccagccgggggagatttgcatc 21628812
Query: 1345 agggg 1349
|||||
Sbjct: 21628811 agggg 21628807
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 21629833 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 21629774
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 21629773 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 21629714
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 21629713 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 21629654
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 21629653 ggcctcgcgggcgtgaccgtcgtcgccac 21629625
Score = 143 bits (72), Expect = 4e-031
Identities = 96/104 (92%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaagatcttcttcgtggaggccatccccaaggcg 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 21628126 caggtggtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcg 21628067
Query: 1741 ccatccggcaagattttaaggaaggatctgagagcaaagctggc 1784
|| || || |||||||| ||||||||||||||||||||| ||||
Sbjct: 21628066 ccgtcgggaaagattttgaggaaggatctgagagcaaagttggc 21628023
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 21630037 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 21629978
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 21629977 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 21629918
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 21629917 acgctctcgttcggcgacgt 21629898
Score = 117 bits (59), Expect = 2e-023
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||| ||||| ||| ||| ||||| || | || |||||||||||||||
Sbjct: 8639028 tacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacacc 8639087
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || ||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 8639088 ggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggag 8639147
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||| |||| ||| ||||| || || || || ||||| |||||| | |||||| ||
Sbjct: 8639148 atcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacc 8639207
Query: 1549 caccccagcat 1559
|| || |||||
Sbjct: 8639208 catccaagcat 8639218
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1581 aatgaaggatgactcctgcggcgagatcccggtggcgttcgtcgtggcgtccggcggctc 1640
||||||||| || ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 21628326 aatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtcgcacgcgacggctc 21628267
Query: 1641 cgggatcaccgaggacgagatcaagcagtacgtggcgaaacaggtg 1686
||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 21628266 ggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg 21628221
Score = 105 bits (53), Expect = 9e-020
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| ||||| ||||| |||||||| || ||||| || |||||| | || || ||||||
Sbjct: 8637410 caggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaag 8637469
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
||||| || ||||||||||||||| ||||| ||||||||| | || |||||||| |||
Sbjct: 8637470 gagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaag 8637529
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||||||||||| || |||||| ||| || ||| |||| |||||| ||||| ||||||
Sbjct: 8637530 atcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatc 8637589
Query: 1345 agggg 1349
|||||
Sbjct: 8637590 agggg 8637594
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 8636013 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 8636072
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 8636073 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 8636127
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 8636363 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 8636415
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 8635821 ccggcgccaccgtcgtcatcaccgag 8635846
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 8635574 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 8635633
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 8635634 cgccgcctcgccgccg 8635649
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 18686747 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 18686701
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 2115417 gcgtcgccgtcgtcgccacg 2115436
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 2114614 gcgtcgccgtcgtcgccacg 2114633
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 422 bits (213), Expect = e-115
Identities = 405/469 (86%)
Strand = Plus / Minus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 13107391 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 13107332
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 13107331 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 13107272
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 13107271 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 13107212
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 13107211 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 13107152
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 13107151 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 13107092
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 13107091 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 13107032
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 13107031 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 13106972
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagg 1168
|| |||||| | | | |||||||||||| |||||| ||||||||||
Sbjct: 13106971 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacagg 13106923
Score = 220 bits (111), Expect = 2e-054
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||||||||| || | |||||| |||||| ||| ||||||||||||||
Sbjct: 13106495 tacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtggctgcacact 13106436
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 13106435 ggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccggctcaaggag 13106376
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 13106375 ctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatgctcatcgcc 13106316
Query: 1549 caccccagcatcgtcgacgccgccgtcgtcc 1579
||| || | ||| |||||||||||||||||
Sbjct: 13106315 cacgccgccgtcgccgacgccgccgtcgtcc 13106285
Score = 176 bits (89), Expect = 3e-041
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| |||||||| |||||||| || |||||||||||||| || |||
Sbjct: 13106831 caggggtacgggatgacggaggcagggccggtgctatcaatgtgcatggcgttcgcgaag 13106772
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||||||||||||| || ||||||||||||||| |||| |||||||| |||
Sbjct: 13106771 gagccgacgccggtgaagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaag 13106712
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||| |||||||||| ||||| |||| |||| ||||||||||| |||||||||||||||
Sbjct: 13106711 atcgtcgacccggacaccggcttgtcactcccgcgcaaccagccgggggagatttgcatc 13106652
Query: 1345 agggg 1349
|||||
Sbjct: 13106651 agggg 13106647
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 13107673 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 13107614
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 13107613 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 13107554
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 13107553 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 13107494
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 13107493 ggcctcgcgggcgtgaccgtcgtcgccac 13107465
Score = 143 bits (72), Expect = 4e-031
Identities = 96/104 (92%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaagatcttcttcgtggaggccatccccaaggcg 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 13105966 caggtggtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcg 13105907
Query: 1741 ccatccggcaagattttaaggaaggatctgagagcaaagctggc 1784
|| || || |||||||| ||||||||||||||||||||| ||||
Sbjct: 13105906 ccgtcgggaaagattttgaggaaggatctgagagcaaagttggc 13105863
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 13107877 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 13107818
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 13107817 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 13107758
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 13107757 acgctctcgttcggcgacgt 13107738
Score = 117 bits (59), Expect = 2e-023
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||| ||||| ||| ||| ||||| || | || |||||||||||||||
Sbjct: 684088 tacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacacc 684147
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || ||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 684148 ggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggag 684207
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||| |||| ||| ||||| || || || || ||||| |||||| | |||||| ||
Sbjct: 684208 atcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacc 684267
Query: 1549 caccccagcat 1559
|| || |||||
Sbjct: 684268 catccaagcat 684278
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1581 aatgaaggatgactcctgcggcgagatcccggtggcgttcgtcgtggcgtccggcggctc 1640
||||||||| || ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 13106166 aatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtcgcacgcgacggctc 13106107
Query: 1641 cgggatcaccgaggacgagatcaagcagtacgtggcgaaacaggtg 1686
||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 13106106 ggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg 13106061
Score = 105 bits (53), Expect = 9e-020
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| ||||| ||||| |||||||| || ||||| || |||||| | || || ||||||
Sbjct: 682470 caggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaag 682529
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
||||| || ||||||||||||||| ||||| ||||||||| | || |||||||| |||
Sbjct: 682530 gagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaag 682589
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||||||||||| || |||||| ||| || ||| |||| |||||| ||||| ||||||
Sbjct: 682590 atcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatc 682649
Query: 1345 agggg 1349
|||||
Sbjct: 682650 agggg 682654
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 681073 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 681132
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 681133 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 681187
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 681423 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 681475
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 680881 ccggcgccaccgtcgtcatcaccgag 680906
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 680634 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 680693
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 680694 cgccgcctcgccgccg 680709
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 10156703 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 10156657
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 422 bits (213), Expect = e-115
Identities = 405/469 (86%)
Strand = Plus / Minus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 20709397 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 20709338
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 20709337 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 20709278
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 20709277 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 20709218
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 20709217 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 20709158
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 20709157 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 20709098
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 20709097 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 20709038
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 20709037 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 20708978
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagg 1168
|| |||||| | | | |||||||||||| |||||| ||||||||||
Sbjct: 20708977 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacagg 20708929
Score = 220 bits (111), Expect = 2e-054
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||||||||| || | |||||| |||||| ||| ||||||||||||||
Sbjct: 20708501 tacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtggctgcacact 20708442
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 20708441 ggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccggctcaaggag 20708382
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 20708381 ctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatgctcatcgcc 20708322
Query: 1549 caccccagcatcgtcgacgccgccgtcgtcc 1579
||| || | ||| |||||||||||||||||
Sbjct: 20708321 cacgccgccgtcgccgacgccgccgtcgtcc 20708291
Score = 176 bits (89), Expect = 3e-041
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| |||||||| |||||||| || |||||||||||||| || |||
Sbjct: 20708837 caggggtacgggatgacggaggcagggccggtgctatcaatgtgcatggcgttcgcgaag 20708778
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||||||||||||| || ||||||||||||||| |||| |||||||| |||
Sbjct: 20708777 gagccgacgccggtgaagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaag 20708718
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||| |||||||||| ||||| |||| |||| ||||||||||| |||||||||||||||
Sbjct: 20708717 atcgtcgacccggacaccggcttgtcactcccgcgcaaccagccgggggagatttgcatc 20708658
Query: 1345 agggg 1349
|||||
Sbjct: 20708657 agggg 20708653
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 20709679 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 20709620
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 20709619 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 20709560
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 20709559 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 20709500
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 20709499 ggcctcgcgggcgtgaccgtcgtcgccac 20709471
Score = 143 bits (72), Expect = 4e-031
Identities = 96/104 (92%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaagatcttcttcgtggaggccatccccaaggcg 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 20707972 caggtggtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcg 20707913
Query: 1741 ccatccggcaagattttaaggaaggatctgagagcaaagctggc 1784
|| || || |||||||| ||||||||||||||||||||| ||||
Sbjct: 20707912 ccgtcgggaaagattttgaggaaggatctgagagcaaagttggc 20707869
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 20709883 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 20709824
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 20709823 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 20709764
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 20709763 acgctctcgttcggcgacgt 20709744
Score = 117 bits (59), Expect = 2e-023
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||| ||||| ||| ||| ||||| || | || |||||||||||||||
Sbjct: 8286094 tacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacacc 8286153
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || ||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 8286154 ggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggag 8286213
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||| |||| ||| ||||| || || || || ||||| |||||| | |||||| ||
Sbjct: 8286214 atcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacc 8286273
Query: 1549 caccccagcat 1559
|| || |||||
Sbjct: 8286274 catccaagcat 8286284
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1581 aatgaaggatgactcctgcggcgagatcccggtggcgttcgtcgtggcgtccggcggctc 1640
||||||||| || ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 20708172 aatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtcgcacgcgacggctc 20708113
Query: 1641 cgggatcaccgaggacgagatcaagcagtacgtggcgaaacaggtg 1686
||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 20708112 ggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg 20708067
Score = 105 bits (53), Expect = 9e-020
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| ||||| ||||| |||||||| || ||||| || |||||| | || || ||||||
Sbjct: 8284476 caggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaag 8284535
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
||||| || ||||||||||||||| ||||| ||||||||| | || |||||||| |||
Sbjct: 8284536 gagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaag 8284595
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||||||||||| || |||||| ||| || ||| |||| |||||| ||||| ||||||
Sbjct: 8284596 atcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatc 8284655
Query: 1345 agggg 1349
|||||
Sbjct: 8284656 agggg 8284660
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 8283079 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 8283138
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 8283139 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 8283193
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 8283429 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 8283481
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 8282887 ccggcgccaccgtcgtcatcaccgag 8282912
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 8282640 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 8282699
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 8282700 cgccgcctcgccgccg 8282715
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 17758709 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 17758663
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 422 bits (213), Expect = e-115
Identities = 405/469 (86%)
Strand = Plus / Minus
Query: 700 gccatcgacgtggcgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctg 759
||||||||||| || ||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 21867638 gccatcgacgtcgccaacgacgccgtggcgctgccctactcgtcgggcacgacggggctc 21867579
Query: 760 cccaagggggtgatgctgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgac 819
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 21867578 cccaagggggtgatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgac 21867519
Query: 820 ggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgcccatg 879
||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||
Sbjct: 21867518 ggcgagaacccgaacctccacctccgggaggacgacgtggtgctctgcgtgctccccatg 21867459
Query: 880 ttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctc 939
|||||||| ||||| || ||||||||||| || |||||||||||||||||||| || ||
Sbjct: 21867458 ttccacgtctactccctccactccatcctcctctgcgggatgcgcgccggcgccgccatc 21867399
Query: 940 gtgatcatgaagcgcttcgacactctccgcatgttcgagctggtgaagaggcacggcatc 999
||| |||||||||| |||||||| || ||| | |||||||| || | |||||| ||
Sbjct: 21867398 gtggtcatgaagcggttcgacaccgtcaagatgctgcagctggtggagcgccacggcgtc 21867339
Query: 1000 acgatcgtgccgctcgtgctgcccatcgcggtggagatggtcaagagcgacgccatcgac 1059
|| |||| ||||||||| | ||||||| || ||||||| ||||||||||||| |||||
Sbjct: 21867338 accatcgcgccgctcgtccctcccatcgtcgtcgagatggccaagagcgacgccctcgac 21867279
Query: 1060 cgccacgacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggag 1119
|||||||||||||| || | |||||||||||||| || ||||| |||||||||||||||
Sbjct: 21867278 cgccacgacctctcctccatccgcatggtcatctccggcgccgcccccatgggcaaggag 21867219
Query: 1120 ctgcaggacctgctgcgcgccaagctccctcgcgccgtgctcggacagg 1168
|| |||||| | | | |||||||||||| |||||| ||||||||||
Sbjct: 21867218 cttcaggacatcgtccacgccaagctccccaacgccgtcctcggacagg 21867170
Score = 220 bits (111), Expect = 2e-054
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||||||||| || | |||||| |||||| ||| ||||||||||||||
Sbjct: 21866742 tacctgaacaacccggaggcgaccgagaagacgatcgacaaggacgggtggctgcacact 21866683
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 21866682 ggcgacatcggcttcgtcgacgacgacgacgagatcttcatcgtggaccggctcaaggag 21866623
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 21866622 ctcatcaagtacaagggcttccaggtcgcccccgccgagctcgaggccatgctcatcgcc 21866563
Query: 1549 caccccagcatcgtcgacgccgccgtcgtcc 1579
||| || | ||| |||||||||||||||||
Sbjct: 21866562 cacgccgccgtcgccgacgccgccgtcgtcc 21866532
Score = 176 bits (89), Expect = 3e-041
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| |||||||| |||||||| || |||||||||||||| || |||
Sbjct: 21867078 caggggtacgggatgacggaggcagggccggtgctatcaatgtgcatggcgttcgcgaag 21867019
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||||||||||||| || ||||||||||||||| |||| |||||||| |||
Sbjct: 21867018 gagccgacgccggtgaagtccggcgcgtgcggcacggtggtgcggaacgccgagctgaag 21866959
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||| |||||||||| ||||| |||| |||| ||||||||||| |||||||||||||||
Sbjct: 21866958 atcgtcgacccggacaccggcttgtcactcccgcgcaaccagccgggggagatttgcatc 21866899
Query: 1345 agggg 1349
|||||
Sbjct: 21866898 agggg 21866894
Score = 168 bits (85), Expect = 7e-039
Identities = 178/209 (85%)
Strand = Plus / Minus
Query: 403 gtgatgctgcttctcccaaactccgtggagttcgcactcgcgttcctcgcgtgctcccgc 462
||||||||||| || || |||||||| |||||||| | ||||||||||||| || ||
Sbjct: 21867920 gtgatgctgctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacgg 21867861
Query: 463 ctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagcag 522
||||| || | | ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 21867860 ctcggggcggtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcag 21867801
Query: 523 gcggcggcctccggcgccaccgtcgtcatcaccgagccggcgttcgtcggcaaggtgcgg 582
| |||||| |||||||| || || || ||||||||||||||||||||| ||||||| |
Sbjct: 21867800 gtggcggcgtccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagc 21867741
Query: 583 gggctcgccggcgtcgccgtcgtcgccac 611
|| ||||| ||||| |||||||||||||
Sbjct: 21867740 ggcctcgcgggcgtgaccgtcgtcgccac 21867712
Score = 143 bits (72), Expect = 4e-031
Identities = 96/104 (92%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaagatcttcttcgtggaggccatccccaaggcg 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 21866213 caggtggtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcg 21866154
Query: 1741 ccatccggcaagattttaaggaaggatctgagagcaaagctggc 1784
|| || || |||||||| ||||||||||||||||||||| ||||
Sbjct: 21866153 ccgtcgggaaagattttgaggaaggatctgagagcaaagttggc 21866110
Score = 135 bits (68), Expect = 1e-028
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 196 ttccgctcgacgcttccggacatcgccatcccggaccacctcccgctccacgactacgtc 255
|||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 21868124 ttccgctcgaggctccccgacatcgccatcccggaccacctcccgctgcacgactacgtg 21868065
Query: 256 ctggagcgcctggcggagcgccgcgaccgcgcgtgcctcatcgacggcgccacgggcgaa 315
| |||||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 21868064 ttcgagcgcctcgccgaccgccgcgaccgggcatgccttatcgatggcgccacgggggag 21868005
Query: 316 acgctcaccttcggcgacgt 335
|||||| | |||||||||||
Sbjct: 21868004 acgctctcgttcggcgacgt 21867985
Score = 117 bits (59), Expect = 2e-023
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||| ||||| ||| ||| ||||| || | || |||||||||||||||
Sbjct: 8871502 tacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacacc 8871561
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || ||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 8871562 ggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggag 8871621
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||| |||| ||| ||||| || || || || ||||| |||||| | |||||| ||
Sbjct: 8871622 atcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacc 8871681
Query: 1549 caccccagcat 1559
|| || |||||
Sbjct: 8871682 catccaagcat 8871692
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1581 aatgaaggatgactcctgcggcgagatcccggtggcgttcgtcgtggcgtccggcggctc 1640
||||||||| || ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 21866413 aatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtcgcacgcgacggctc 21866354
Query: 1641 cgggatcaccgaggacgagatcaagcagtacgtggcgaaacaggtg 1686
||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 21866353 ggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg 21866308
Score = 105 bits (53), Expect = 9e-020
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| ||||| ||||| |||||||| || ||||| || |||||| | || || ||||||
Sbjct: 8869884 caggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaag 8869943
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
||||| || ||||||||||||||| ||||| ||||||||| | || |||||||| |||
Sbjct: 8869944 gagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaag 8870003
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||||||||||| || |||||| ||| || ||| |||| |||||| ||||| ||||||
Sbjct: 8870004 atcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatc 8870063
Query: 1345 agggg 1349
|||||
Sbjct: 8870064 agggg 8870068
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 8868487 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 8868546
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 8868547 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 8868601
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 8868837 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 8868889
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 8868295 ccggcgccaccgtcgtcatcaccgag 8868320
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 8868048 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 8868107
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 8868108 cgccgcctcgccgccg 8868123
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 18924834 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 18924788
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 2347891 gcgtcgccgtcgtcgccacg 2347910
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 2347088 gcgtcgccgtcgtcgccacg 2347107
>dbj|AK069932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036P12, full
insert sequence
Length = 2066
Score = 258 bits (130), Expect = 1e-065
Identities = 403/494 (81%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggagctgcag 1125
||||||||||||||||| ||||| |||| || || ||||||||||||||||| | ||
Sbjct: 1003 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaaggacatcgag 1062
Query: 1126 gacctgctgcgcgccaagctccctcgcgccgtgctcggacagggttatgggatgacagag 1185
||| | | ||||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 1063 gacgcgttcatggccaagctccccggcgccgtgctcggacaggggtatggaatgactgag 1122
Query: 1186 gcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtcc 1245
||||| || ||||| || |||||| | || || ||||||||||| || ||||||||||
Sbjct: 1123 gcagggccagtgctgtcaatgtgcctagcattcgccaaggagcccttcaaggtgaagtcc 1182
Query: 1246 ggtgcctgcggcacggtggtgaggaatgccgagctaaagatcatcgacccggagaccggg 1305
||||| ||||| ||||||||| | || |||||||| |||||||||||||| || ||||||
Sbjct: 1183 ggtgcgtgcgggacggtggtgcgcaacgccgagctgaagatcatcgaccccgacaccggg 1242
Query: 1306 ctgtccctccaccgcaaccagcccggggagatttgcatcaggggcaagcagttgatgaaa 1365
||| || ||| |||| |||||| ||||| ||||||||||| | ||| | ||||||
Sbjct: 1243 aagtcgcttggccggaacctgcccggcgagatctgcatcagggggcaacagatcatgaaa 1302
Query: 1366 gggtacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcac 1425
|| ||||| |||||||| ||||| ||| ||| ||||| || | || ||||||||||||
Sbjct: 1303 ggttacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcac 1362
Query: 1426 accggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaag 1485
||||| ||||| || ||||||||||||| |||||||||||||||||| || ||||||||
Sbjct: 1363 accggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaag 1422
Query: 1486 gagctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatc 1545
||| ||||||| |||| ||| ||||| || || || || ||||| |||||| | ||||||
Sbjct: 1423 gagatcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatc 1482
Query: 1546 gcccaccccagcat 1559
|||| || |||||
Sbjct: 1483 acccatccaagcat 1496
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 653 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 712
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 713 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 767
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 461 ccggcgccaccgtcgtcatcaccgag 486
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 214 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 273
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 274 cgccgcctcgccgccg 289
>ref|XM_480952.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2066
Score = 258 bits (130), Expect = 1e-065
Identities = 403/494 (81%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaaggagctgcag 1125
||||||||||||||||| ||||| |||| || || ||||||||||||||||| | ||
Sbjct: 1003 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaaggacatcgag 1062
Query: 1126 gacctgctgcgcgccaagctccctcgcgccgtgctcggacagggttatgggatgacagag 1185
||| | | ||||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 1063 gacgcgttcatggccaagctccccggcgccgtgctcggacaggggtatggaatgactgag 1122
Query: 1186 gcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccggtgaagtcc 1245
||||| || ||||| || |||||| | || || ||||||||||| || ||||||||||
Sbjct: 1123 gcagggccagtgctgtcaatgtgcctagcattcgccaaggagcccttcaaggtgaagtcc 1182
Query: 1246 ggtgcctgcggcacggtggtgaggaatgccgagctaaagatcatcgacccggagaccggg 1305
||||| ||||| ||||||||| | || |||||||| |||||||||||||| || ||||||
Sbjct: 1183 ggtgcgtgcgggacggtggtgcgcaacgccgagctgaagatcatcgaccccgacaccggg 1242
Query: 1306 ctgtccctccaccgcaaccagcccggggagatttgcatcaggggcaagcagttgatgaaa 1365
||| || ||| |||| |||||| ||||| ||||||||||| | ||| | ||||||
Sbjct: 1243 aagtcgcttggccggaacctgcccggcgagatctgcatcagggggcaacagatcatgaaa 1302
Query: 1366 gggtacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcac 1425
|| ||||| |||||||| ||||| ||| ||| ||||| || | || ||||||||||||
Sbjct: 1303 ggttacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcac 1362
Query: 1426 accggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaag 1485
||||| ||||| || ||||||||||||| |||||||||||||||||| || ||||||||
Sbjct: 1363 accggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaag 1422
Query: 1486 gagctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatc 1545
||| ||||||| |||| ||| ||||| || || || || ||||| |||||| | ||||||
Sbjct: 1423 gagatcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatc 1482
Query: 1546 gcccaccccagcat 1559
|||| || |||||
Sbjct: 1483 acccatccaagcat 1496
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 653 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 712
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 713 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 767
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 461 ccggcgccaccgtcgtcatcaccgag 486
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 214 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 273
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 274 cgccgcctcgccgccg 289
>dbj|AK105636.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-D12, full
insert sequence
Length = 2288
Score = 198 bits (100), Expect = 8e-048
Identities = 340/420 (80%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttg 1219
|||||||||| || |||||||| ||||| || |||||||| ||||||||| |||||| |
Sbjct: 1309 tcggacagggatacgggatgacggaggcggggccggtgctgtcgatgtgcccggcgttcg 1368
Query: 1220 ccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagc 1279
||||||||||| |||| ||||||||| | ||||| ||||||||| |||| || ||||
Sbjct: 1369 ccaaggagccgacgccggcgaagtccgggtcgtgcgggacggtggtgcggaacgcggagc 1428
Query: 1280 taaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagattt 1339
| ||| | |||||||||| || || | |||||| |||||||| ||||| ||||| |
Sbjct: 1429 tcaaggtggtcgacccggacacgggcttctccctcggccgcaacctccccggcgagatct 1488
Query: 1340 gcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaacggcgaaga 1399
||||| | ||| ||| | |||||||| ||||| ||| | || ||||| || || ||
Sbjct: 1489 gcatccgcggcccacagatcatgaaaggttacctgaacgatcccgaggcgaccgccgcga 1548
Query: 1400 ccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacg 1459
| |||||| |||||||||||||||||||| ||||| || ||||||||||||| |||||
Sbjct: 1549 cgatcgacgtcgaggggtggctgcacaccggcgacatcggctacgtcgacgacgacgacg 1608
Query: 1460 agatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctc 1519
|| |||||||||||||||| |||||||||||||||| | |||||||||||| || | |
Sbjct: 1609 aggtcttcatcgtcgaccgtgtcaaggagctcatcaaattcaaggggttccaggtgccgc 1668
Query: 1520 cggcggagctcgaggccatgctcatcgcccaccccagcatcgtcgacgccgccgtcgtcc 1579
|||| ||||| ||| | |||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 1669 cggccgagctggagtcgctgctcatcgctcacccgtccatcgctgacgccgccgtcgtcc 1728
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Plus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 876 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 935
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 936 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 995
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 996 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 1055
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 1056 ctgctgtgcgcggtgcgcgccggcgcggcg 1085
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 1830 caggtggtgttctacaagaggctacacaag 1859
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 309 acggtgttccggtccaagcttccggacatcgacatccc 346
>ref|XM_467290.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2288
Score = 198 bits (100), Expect = 8e-048
Identities = 340/420 (80%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttg 1219
|||||||||| || |||||||| ||||| || |||||||| ||||||||| |||||| |
Sbjct: 1309 tcggacagggatacgggatgacggaggcggggccggtgctgtcgatgtgcccggcgttcg 1368
Query: 1220 ccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagc 1279
||||||||||| |||| ||||||||| | ||||| ||||||||| |||| || ||||
Sbjct: 1369 ccaaggagccgacgccggcgaagtccgggtcgtgcgggacggtggtgcggaacgcggagc 1428
Query: 1280 taaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagattt 1339
| ||| | |||||||||| || || | |||||| |||||||| ||||| ||||| |
Sbjct: 1429 tcaaggtggtcgacccggacacgggcttctccctcggccgcaacctccccggcgagatct 1488
Query: 1340 gcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaacggcgaaga 1399
||||| | ||| ||| | |||||||| ||||| ||| | || ||||| || || ||
Sbjct: 1489 gcatccgcggcccacagatcatgaaaggttacctgaacgatcccgaggcgaccgccgcga 1548
Query: 1400 ccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacg 1459
| |||||| |||||||||||||||||||| ||||| || ||||||||||||| |||||
Sbjct: 1549 cgatcgacgtcgaggggtggctgcacaccggcgacatcggctacgtcgacgacgacgacg 1608
Query: 1460 agatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctc 1519
|| |||||||||||||||| |||||||||||||||| | |||||||||||| || | |
Sbjct: 1609 aggtcttcatcgtcgaccgtgtcaaggagctcatcaaattcaaggggttccaggtgccgc 1668
Query: 1520 cggcggagctcgaggccatgctcatcgcccaccccagcatcgtcgacgccgccgtcgtcc 1579
|||| ||||| ||| | |||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 1669 cggccgagctggagtcgctgctcatcgctcacccgtccatcgctgacgccgccgtcgtcc 1728
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Plus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 876 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 935
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 936 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 995
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 996 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 1055
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 1056 ctgctgtgcgcggtgcgcgccggcgcggcg 1085
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 1830 caggtggtgttctacaagaggctacacaag 1859
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 309 acggtgttccggtccaagcttccggacatcgacatccc 346
>gb|CB684593.1|CB684593 OSJNEf14E12.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14E12 5', mRNA sequence
Length = 794
Score = 176 bits (89), Expect = 3e-041
Identities = 317/393 (80%)
Strand = Plus / Plus
Query: 1153 gccgtgctcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatg 1212
||||| |||||||||||||| || ||||| ||||| || || ||||| | |||||| ||
Sbjct: 397 gccgtcctcggacagggttacggtatgactgaggctgggccagtgctggcaatgtgcctg 456
Query: 1213 gcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaat 1272
||||||||||||||||| || ||| |||||||| | ||||| || |||||| | ||
Sbjct: 457 gcgtttgccaaggagcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaac 516
Query: 1273 gccgagctaaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccggg 1332
|| ||||| |||||| ||||||| || ||||| |||||| ||| |||||| ||||
Sbjct: 517 gcggagctgaagatcgtcgaccccgacaccggcacctccctcggccggaaccagtccggc 576
Query: 1333 gagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaacg 1392
||||| |||||| | || | ||| | |||||||| || || || | || ||||| ||
Sbjct: 577 gagatctgcatccgcggagaacagatcatgaaaggctatctgaatgatcctgaggcgacc 636
Query: 1393 gcgaagaccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgac 1452
||| ||||||||| ||| ||||||||||||||||||||||| || | ||||||||||
Sbjct: 637 aagaacaccatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgac 696
Query: 1453 ggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaa 1512
| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct: 697 gacgacgagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccag 756
Query: 1513 gtcgctccggcggagctcgaggccatgctcatc 1545
|| | ||||| ||||| ||||| ||||||||
Sbjct: 757 gtgccaccggccgagctggaggcgctgctcatc 789
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 325 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 371
>dbj|AK070083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045L07, full
insert sequence
Length = 2044
Score = 176 bits (89), Expect = 3e-041
Identities = 317/393 (80%)
Strand = Plus / Plus
Query: 1153 gccgtgctcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatg 1212
||||| |||||||||||||| || ||||| ||||| || || ||||| | |||||| ||
Sbjct: 1068 gccgtcctcggacagggttacggtatgactgaggctgggccagtgctggcaatgtgcctg 1127
Query: 1213 gcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaat 1272
||||||||||||||||| || ||| |||||||| | ||||| || |||||| | ||
Sbjct: 1128 gcgtttgccaaggagcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaac 1187
Query: 1273 gccgagctaaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccggg 1332
|| ||||| |||||| ||||||| || ||||| |||||| ||| |||||| ||||
Sbjct: 1188 gcggagctgaagatcgtcgaccccgacaccggcacctccctcggccggaaccagtccggc 1247
Query: 1333 gagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaacg 1392
||||| |||||| | || | ||| | |||||||| || || || | || ||||| ||
Sbjct: 1248 gagatctgcatccgcggagaacagatcatgaaaggctatctgaatgatcctgaggcgacc 1307
Query: 1393 gcgaagaccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgac 1452
||| ||||||||| ||| ||||||||||||||||||||||| || | ||||||||||
Sbjct: 1308 aagaacaccatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgac 1367
Query: 1453 ggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaa 1512
| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1368 gacgacgagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccag 1427
Query: 1513 gtcgctccggcggagctcgaggccatgctcatc 1545
|| | ||||| ||||| ||||| ||||||||
Sbjct: 1428 gtgccaccggccgagctggaggcgctgctcatc 1460
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 1560 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 1616
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 996 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 1042
>gb|D41112.1|D41112 RICS3391A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 332
Score = 157 bits (79), Expect = 3e-035
Identities = 130/147 (88%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 131 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 190
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 191 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 250
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| |||||||||
Sbjct: 251 ccggccgagctggaggcgatgctcatc 277
>gb|D47966.1|D47966 RICS13787A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 415
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 112 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 171
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 172 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 231
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 232 ccggccgagctggaggcgctgctcatc 258
>gb|CB653843.1|CB653843 OSJNEc05E03.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05E03 3', mRNA sequence
Length = 811
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 763 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 704
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 703 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 644
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 643 ccggccgagctggaggcgctgctcatc 617
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 517 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 461
>gb|CB654031.1|CB654031 OSJNEc05J16.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05J16 3', mRNA sequence
Length = 755
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 710 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 651
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 650 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 591
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 590 ccggccgagctggaggcgctgctcatc 564
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 464 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 408
>gb|CB655489.1|CB655489 OSJNEc08P15.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08P15 3', mRNA sequence
Length = 810
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 765 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 706
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 705 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 646
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 645 ccggccgagctggaggcgctgctcatc 619
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 519 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 463
>gb|CB676498.1|CB676498 OSJNEe12M15.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe12M15 3', mRNA sequence
Length = 734
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 720 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 661
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 660 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 601
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 600 ccggccgagctggaggcgctgctcatc 574
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||| ||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 474 atcaccgaggatgagataaagaaattcgttgcaaaagaggtggtgttctacaagagg 418
>gb|CB684594.1|CB684594 OSJNEf14E12.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14E12 3', mRNA sequence
Length = 749
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 702 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 643
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 642 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 583
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 582 ccggccgagctggaggcgctgctcatc 556
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| |||||||||| |||||||||
Sbjct: 456 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttttacaagagg 400
>dbj|AP004115.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone OJ1119_A07,
*** SEQUENCING IN PROGRESS ***
Length = 110900
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 3023 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 2964
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 2963 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 2904
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 2903 ccggccgagctggaggcgctgctcatc 2877
Score = 54.0 bits (27), Expect = 3e-004
Identities = 111/139 (79%)
Strand = Plus / Minus
Query: 1166 agggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaagg 1225
||||||| || ||||| ||||| || || ||||| | |||||| |||||||||||||||
Sbjct: 5834 agggttacggtatgactgaggctgggccagtgctggcaatgtgcctggcgtttgccaagg 5775
Query: 1226 agccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaaga 1285
|||| || ||| |||||||| | ||||| || |||||| | || || ||||| ||||
Sbjct: 5774 agcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaacgcggagctgaaga 5715
Query: 1286 tcatcgacccggagaccgg 1304
|| ||||||| || |||||
Sbjct: 5714 tcgtcgaccccgacaccgg 5696
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 6030 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 5984
Score = 46.1 bits (23), Expect = 0.073
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1679 aacaggtggtgttctacaagagg 1701
|||||||||||||||||||||||
Sbjct: 2570 aacaggtggtgttctacaagagg 2548
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0504A05
Length = 148360
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 101837 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 101896
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 101897 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 101956
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 101957 ccggccgagctggaggcgctgctcatc 101983
Score = 54.0 bits (27), Expect = 3e-004
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaagg 1225
||||||| || ||||| ||||| || || ||||| | |||||| |||||||||||||||
Sbjct: 99026 agggttacggtatgactgaggctgggccagtgctggcaatgtgcctggcgtttgccaagg 99085
Query: 1226 agccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaaga 1285
|||| || ||| |||||||| | ||||| || |||||| | || || ||||| ||||
Sbjct: 99086 agcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaacgcggagctgaaga 99145
Query: 1286 tcatcgacccggagaccgg 1304
|| ||||||| || |||||
Sbjct: 99146 tcgtcgaccccgacaccgg 99164
Score = 46.1 bits (23), Expect = 0.073
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1679 aacaggtggtgttctacaagagg 1701
|||||||||||||||||||||||
Sbjct: 102290 aacaggtggtgttctacaagagg 102312
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 98830 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 98876
>gb|AACV01003472.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003472, whole
genome shotgun sequence
Length = 23863
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 20507 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 20566
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 20567 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 20626
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 20627 ccggccgagctggaggcgctgctcatc 20653
Score = 54.0 bits (27), Expect = 3e-004
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaagg 1225
||||||| || ||||| ||||| || || ||||| | |||||| |||||||||||||||
Sbjct: 17696 agggttacggtatgactgaggctgggccagtgctggcaatgtgcctggcgtttgccaagg 17755
Query: 1226 agccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaaga 1285
|||| || ||| |||||||| | ||||| || |||||| | || || ||||| ||||
Sbjct: 17756 agcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaacgcggagctgaaga 17815
Query: 1286 tcatcgacccggagaccgg 1304
|| ||||||| || |||||
Sbjct: 17816 tcgtcgaccccgacaccgg 17834
Score = 46.1 bits (23), Expect = 0.073
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1679 aacaggtggtgttctacaagagg 1701
|||||||||||||||||||||||
Sbjct: 20960 aacaggtggtgttctacaagagg 20982
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 17500 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 17546
>ref|NT_107176.1| Oryza sativa (japonica cultivar-group)
Length = 1593847
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 1250871 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 1250930
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 1250931 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 1250990
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 1250991 ccggccgagctggaggcgctgctcatc 1251017
Score = 54.0 bits (27), Expect = 3e-004
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaagg 1225
||||||| || ||||| ||||| || || ||||| | |||||| |||||||||||||||
Sbjct: 1248060 agggttacggtatgactgaggctgggccagtgctggcaatgtgcctggcgtttgccaagg 1248119
Query: 1226 agccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaaga 1285
|||| || ||| |||||||| | ||||| || |||||| | || || ||||| ||||
Sbjct: 1248120 agcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaacgcggagctgaaga 1248179
Query: 1286 tcatcgacccggagaccgg 1304
|| ||||||| || |||||
Sbjct: 1248180 tcgtcgaccccgacaccgg 1248198
Score = 46.1 bits (23), Expect = 0.073
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1679 aacaggtggtgttctacaagagg 1701
|||||||||||||||||||||||
Sbjct: 1251324 aacaggtggtgttctacaagagg 1251346
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 1247864 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 1247910
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 4370482 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 4370541
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 4370542 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 4370601
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 4370602 ccggccgagctggaggcgctgctcatc 4370628
Score = 54.0 bits (27), Expect = 3e-004
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaagg 1225
||||||| || ||||| ||||| || || ||||| | |||||| |||||||||||||||
Sbjct: 4367671 agggttacggtatgactgaggctgggccagtgctggcaatgtgcctggcgtttgccaagg 4367730
Query: 1226 agccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaaga 1285
|||| || ||| |||||||| | ||||| || |||||| | || || ||||| ||||
Sbjct: 4367731 agcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaacgcggagctgaaga 4367790
Query: 1286 tcatcgacccggagaccgg 1304
|| ||||||| || |||||
Sbjct: 4367791 tcgtcgaccccgacaccgg 4367809
Score = 46.1 bits (23), Expect = 0.073
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1679 aacaggtggtgttctacaagagg 1701
|||||||||||||||||||||||
Sbjct: 4370935 aacaggtggtgttctacaagagg 4370957
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 4367475 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 4367521
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 4370482 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 4370541
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 4370542 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 4370601
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 4370602 ccggccgagctggaggcgctgctcatc 4370628
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Minus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 28666590 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 28666531
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 28666530 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 28666471
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 28666470 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 28666411
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 28666410 ctgctgtgcgcggtgcgcgccggcgcggcg 28666381
Score = 54.0 bits (27), Expect = 3e-004
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaagg 1225
||||||| || ||||| ||||| || || ||||| | |||||| |||||||||||||||
Sbjct: 4367671 agggttacggtatgactgaggctgggccagtgctggcaatgtgcctggcgtttgccaagg 4367730
Query: 1226 agccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaaga 1285
|||| || ||| |||||||| | ||||| || |||||| | || || ||||| ||||
Sbjct: 4367731 agcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaacgcggagctgaaga 4367790
Query: 1286 tcatcgacccggagaccgg 1304
|| ||||||| || |||||
Sbjct: 4367791 tcgtcgaccccgacaccgg 4367809
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 28664290 caggtggtgttctacaagaggctacacaag 28664261
Score = 46.1 bits (23), Expect = 0.073
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1679 aacaggtggtgttctacaagagg 1701
|||||||||||||||||||||||
Sbjct: 4370935 aacaggtggtgttctacaagagg 4370957
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 4367475 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 4367521
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 28667157 acggtgttccggtccaagcttccggacatcgacatccc 28667120
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 26575379 gccaccgtcgtcatcaccga 26575398
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 149 bits (75), Expect = 7e-033
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 4285023 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 4285082
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgct 1518
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || |
Sbjct: 4285083 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgcca 4285142
Query: 1519 ccggcggagctcgaggccatgctcatc 1545
||||| ||||| ||||| ||||||||
Sbjct: 4285143 ccggccgagctggaggcgctgctcatc 4285169
Score = 129 bits (65), Expect = 6e-027
Identities = 92/101 (91%)
Strand = Plus / Minus
Query: 1411 gaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatc 1470
|||||||||||||||||||| ||||| || ||||||||||||| ||||||| ||||||||
Sbjct: 28696683 gaggggtggctgcacaccggcgacatcggctacgtcgacgacgacgacgaggtcttcatc 28696624
Query: 1471 gtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|||||||| |||||||||||||||| | ||||||||||||
Sbjct: 28696623 gtcgaccgtgtcaaggagctcatcaaattcaaggggttcca 28696583
Score = 79.8 bits (40), Expect = 5e-012
Identities = 145/180 (80%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| ||||| || |||||||| ||||||||| |||||| ||||||
Sbjct: 28697282 cagggatacgggatgacggaggcggggccggtgctgtcgatgtgcccggcgttcgccaag 28697223
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||| ||||||||| | ||||| ||||||||| |||| || ||||| |||
Sbjct: 28697222 gagccgacgccggcgaagtccgggtcgtgcgggacggtggtgcggaacgcggagctcaag 28697163
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
| |||||||||| || || | |||||| |||||||| ||||| ||||| ||||||
Sbjct: 28697162 gtggtcgacccggacacgggcttctccctcggccgcaacctccccggcgagatctgcatc 28697103
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Minus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 28698482 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 28698423
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 28698422 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 28698363
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 28698362 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 28698303
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 28698302 ctgctgtgcgcggtgcgcgccggcgcggcg 28698273
Score = 54.0 bits (27), Expect = 3e-004
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaagg 1225
||||||| || ||||| ||||| || || ||||| | |||||| |||||||||||||||
Sbjct: 4282212 agggttacggtatgactgaggctgggccagtgctggcaatgtgcctggcgtttgccaagg 4282271
Query: 1226 agccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaaga 1285
|||| || ||| |||||||| | ||||| || |||||| | || || ||||| ||||
Sbjct: 4282272 agcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaacgcggagctgaaga 4282331
Query: 1286 tcatcgacccggagaccgg 1304
|| ||||||| || |||||
Sbjct: 4282332 tcgtcgaccccgacaccgg 4282350
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 28696156 caggtggtgttctacaagaggctacacaag 28696127
Score = 46.1 bits (23), Expect = 0.073
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1679 aacaggtggtgttctacaagagg 1701
|||||||||||||||||||||||
Sbjct: 4285476 aacaggtggtgttctacaagagg 4285498
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 4282016 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 4282062
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 28699049 acggtgttccggtccaagcttccggacatcgacatccc 28699012
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 26668096 gccaccgtcgtcatcaccga 26668115
>gb|CB000351.1|CB000351 S345U_D03 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 761
Score = 147 bits (74), Expect = 3e-032
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 1400 ccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacg 1459
|||||||| ||| ||||||||||||||||||||||| || | ||||||||||| |||||
Sbjct: 45 ccatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgacg 104
Query: 1460 agatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctc 1519
||||||||||||| ||| ||||||||||| |||||||||||||||||||||| || | |
Sbjct: 105 agatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttccaggtgccac 164
Query: 1520 cggcggagctcgaggccatgctcatc 1545
|||| ||||| ||||| ||||||||
Sbjct: 165 cggccgagctggaggcgctgctcatc 190
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 290 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 346
>gb|D41049.1|D41049 RICS3310A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 457
Score = 145 bits (73), Expect = 1e-031
Identities = 103/113 (91%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 132 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 191
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|||||||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct: 192 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttcca 244
>gb|D41813.1|D41813 RICS4636A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 413
Score = 145 bits (73), Expect = 1e-031
Identities = 103/113 (91%)
Strand = Plus / Plus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| ||| ||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 163 accatcgacgaggacgggtggctgcacaccggagacatcggcttcgtcgacgacgacgac 222
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|||||||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct: 223 gagatcttcatcgtggacaggctcaaggagatcatcaagtacaaggggttcca 275
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 129 bits (65), Expect = 6e-027
Identities = 92/101 (91%)
Strand = Plus / Minus
Query: 1411 gaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatc 1470
|||||||||||||||||||| ||||| || ||||||||||||| ||||||| ||||||||
Sbjct: 3861682 gaggggtggctgcacaccggcgacatcggctacgtcgacgacgacgacgaggtcttcatc 3861623
Query: 1471 gtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|||||||| |||||||||||||||| | ||||||||||||
Sbjct: 3861622 gtcgaccgtgtcaaggagctcatcaaattcaaggggttcca 3861582
Score = 79.8 bits (40), Expect = 5e-012
Identities = 145/180 (80%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| ||||| || |||||||| ||||||||| |||||| ||||||
Sbjct: 3862281 cagggatacgggatgacggaggcggggccggtgctgtcgatgtgcccggcgttcgccaag 3862222
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||| ||||||||| | ||||| ||||||||| |||| || ||||| |||
Sbjct: 3862221 gagccgacgccggcgaagtccgggtcgtgcgggacggtggtgcggaacgcggagctcaag 3862162
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
| |||||||||| || || | |||||| |||||||| ||||| ||||| ||||||
Sbjct: 3862161 gtggtcgacccggacacgggcttctccctcggccgcaacctccccggcgagatctgcatc 3862102
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Minus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 3863481 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 3863422
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 3863421 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 3863362
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 3863361 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 3863302
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 3863301 ctgctgtgcgcggtgcgcgccggcgcggcg 3863272
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 3861155 caggtggtgttctacaagaggctacacaag 3861126
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 3864048 acggtgttccggtccaagcttccggacatcgacatccc 3864011
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 1833095 gccaccgtcgtcatcaccga 1833114
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0459B01
Length = 163087
Score = 129 bits (65), Expect = 6e-027
Identities = 92/101 (91%)
Strand = Plus / Minus
Query: 1411 gaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatc 1470
|||||||||||||||||||| ||||| || ||||||||||||| ||||||| ||||||||
Sbjct: 13256 gaggggtggctgcacaccggcgacatcggctacgtcgacgacgacgacgaggtcttcatc 13197
Query: 1471 gtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|||||||| |||||||||||||||| | ||||||||||||
Sbjct: 13196 gtcgaccgtgtcaaggagctcatcaaattcaaggggttcca 13156
Score = 79.8 bits (40), Expect = 5e-012
Identities = 145/180 (80%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| ||||| || |||||||| ||||||||| |||||| ||||||
Sbjct: 13855 cagggatacgggatgacggaggcggggccggtgctgtcgatgtgcccggcgttcgccaag 13796
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||| ||||||||| | ||||| ||||||||| |||| || ||||| |||
Sbjct: 13795 gagccgacgccggcgaagtccgggtcgtgcgggacggtggtgcggaacgcggagctcaag 13736
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
| |||||||||| || || | |||||| |||||||| ||||| ||||| ||||||
Sbjct: 13735 gtggtcgacccggacacgggcttctccctcggccgcaacctccccggcgagatctgcatc 13676
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Minus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 15055 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 14996
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 14995 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 14936
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 14935 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 14876
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 14875 ctgctgtgcgcggtgcgcgccggcgcggcg 14846
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 12729 caggtggtgttctacaagaggctacacaag 12700
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 15622 acggtgttccggtccaagcttccggacatcgacatccc 15585
>dbj|AP005868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0666E12
Length = 47765
Score = 129 bits (65), Expect = 6e-027
Identities = 92/101 (91%)
Strand = Plus / Minus
Query: 1411 gaggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatc 1470
|||||||||||||||||||| ||||| || ||||||||||||| ||||||| ||||||||
Sbjct: 44696 gaggggtggctgcacaccggcgacatcggctacgtcgacgacgacgacgaggtcttcatc 44637
Query: 1471 gtcgaccggctcaaggagctcatcaagtacaaggggttcca 1511
|||||||| |||||||||||||||| | ||||||||||||
Sbjct: 44636 gtcgaccgtgtcaaggagctcatcaaattcaaggggttcca 44596
Score = 79.8 bits (40), Expect = 5e-012
Identities = 145/180 (80%)
Strand = Plus / Minus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| || |||||||| ||||| || |||||||| ||||||||| |||||| ||||||
Sbjct: 45295 cagggatacgggatgacggaggcggggccggtgctgtcgatgtgcccggcgttcgccaag 45236
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
|||||| |||| ||||||||| | ||||| ||||||||| |||| || ||||| |||
Sbjct: 45235 gagccgacgccggcgaagtccgggtcgtgcgggacggtggtgcggaacgcggagctcaag 45176
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
| |||||||||| || || | |||||| |||||||| ||||| ||||| ||||||
Sbjct: 45175 gtggtcgacccggacacgggcttctccctcggccgcaacctccccggcgagatctgcatc 45116
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Minus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 46495 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 46436
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 46435 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 46376
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 46375 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 46316
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 46315 ctgctgtgcgcggtgcgcgccggcgcggcg 46286
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 44169 caggtggtgttctacaagaggctacacaag 44140
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 47062 acggtgttccggtccaagcttccggacatcgacatccc 47025
>gb|AACV01017731.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017731, whole
genome shotgun sequence
Length = 23379
Score = 117 bits (59), Expect = 2e-023
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||| ||||| ||| ||| ||||| || | || |||||||||||||||
Sbjct: 6753 tacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacacc 6812
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || ||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 6813 ggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggag 6872
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||| |||| ||| ||||| || || || || ||||| |||||| | |||||| ||
Sbjct: 6873 atcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacc 6932
Query: 1549 caccccagcat 1559
|| || |||||
Sbjct: 6933 catccaagcat 6943
Score = 105 bits (53), Expect = 9e-020
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| ||||| ||||| |||||||| || ||||| || |||||| | || || ||||||
Sbjct: 5135 caggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaag 5194
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
||||| || ||||||||||||||| ||||| ||||||||| | || |||||||| |||
Sbjct: 5195 gagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaag 5254
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||||||||||| || |||||| ||| || ||| |||| |||||| ||||| ||||||
Sbjct: 5255 atcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatc 5314
Query: 1345 agggg 1349
|||||
Sbjct: 5315 agggg 5319
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 3738 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 3797
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 3798 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 3852
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 4088 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 4140
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 3546 ccggcgccaccgtcgtcatcaccgag 3571
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 3299 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 3358
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 3359 cgccgcctcgccgccg 3374
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1033_B09
Length = 120648
Score = 117 bits (59), Expect = 2e-023
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||| ||||| ||| ||| ||||| || | || |||||||||||||||
Sbjct: 55145 tacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacacc 55204
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || ||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 55205 ggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggag 55264
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggccatgctcatcgcc 1548
||||||| |||| ||| ||||| || || || || ||||| |||||| | |||||| ||
Sbjct: 55265 atcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacc 55324
Query: 1549 caccccagcat 1559
|| || |||||
Sbjct: 55325 catccaagcat 55335
Score = 105 bits (53), Expect = 9e-020
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| ||||| ||||| |||||||| || ||||| || |||||| | || || ||||||
Sbjct: 53527 caggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaag 53586
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
||||| || ||||||||||||||| ||||| ||||||||| | || |||||||| |||
Sbjct: 53587 gagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaag 53646
Query: 1285 atcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagatttgcatc 1344
||||||||||| || |||||| ||| || ||| |||| |||||| ||||| ||||||
Sbjct: 53647 atcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatc 53706
Query: 1345 agggg 1349
|||||
Sbjct: 53707 agggg 53711
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 52130 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 52189
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 52190 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 52244
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 52480 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 52532
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 51938 ccggcgccaccgtcgtcatcaccgag 51963
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 51691 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 51750
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 51751 cgccgcctcgccgccg 51766
>emb|X52623.1|OS4CL Rice 4-CL gene for 4-coumarate-CoA ligase (EC 6.2.1.12)
Length = 5225
Score = 111 bits (56), Expect = 1e-021
Identities = 140/168 (83%)
Strand = Plus / Plus
Query: 1369 tacctcaacaacccggaggcaacggcgaagaccatcgactcggaggggtggctgcacacc 1428
||||| |||||||| ||||| ||| ||| ||||| || | || |||||||||||||||
Sbjct: 4214 tacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacacc 4273
Query: 1429 ggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggag 1488
|| ||||| || ||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 4274 ggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggag 4333
Query: 1489 ctcatcaagtacaaggggttccaagtcgctccggcggagctcgaggcc 1536
||||||| |||| ||| ||||| || || || || ||||| ||||||
Sbjct: 4334 atcatcaaatacaggggcttccaggtagcccctgcagagctggaggcc 4381
Score = 97.6 bits (49), Expect = 2e-017
Identities = 118/141 (83%)
Strand = Plus / Plus
Query: 1165 cagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaag 1224
||||| ||||| ||||| |||||||| || ||||| || |||||| | || || ||||||
Sbjct: 2529 caggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaag 2588
Query: 1225 gagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaag 1284
||||| || ||||||||||||||| ||||| ||||||||| | || |||||||| |||
Sbjct: 2589 gagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaag 2648
Query: 1285 atcatcgacccggagaccggg 1305
||||||||||| || ||||||
Sbjct: 2649 atcatcgaccccgacaccggg 2669
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 1142 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 1201
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 1202 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 1256
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 1492 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 1544
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 950 ccggcgccaccgtcgtcatcaccgag 975
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 703 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 762
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 763 cgccgcctcgccgccg 778
>gb|AACV01009260.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009260, whole
genome shotgun sequence
Length = 63390
Score = 109 bits (55), Expect = 6e-021
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 1412 aggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcg 1471
||||||||||||||||||| ||| |||||||| |||||| || || ||| | |||||||
Sbjct: 32411 aggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcg 32470
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
| ||| || |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 32471 tggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcg 32530
Query: 1532 aggccatgctcatcgcccacccc 1554
||||| | ||| || ||||||||
Sbjct: 32531 aggccgtcctcctctcccacccc 32553
>ref|XM_471766.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1668
Score = 109 bits (55), Expect = 6e-021
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 1412 aggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcg 1471
||||||||||||||||||| ||| |||||||| |||||| || || ||| | |||||||
Sbjct: 1271 aggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcg 1330
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
| ||| || |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 1331 tggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcg 1390
Query: 1532 aggccatgctcatcgcccacccc 1554
||||| | ||| || ||||||||
Sbjct: 1391 aggccgtcctcctctcccacccc 1413
>ref|NT_079856.2| Oryza sativa (japonica cultivar-group)
Length = 961627
Score = 109 bits (55), Expect = 6e-021
Identities = 121/143 (84%)
Strand = Plus / Minus
Query: 1412 aggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcg 1471
||||||||||||||||||| ||| |||||||| |||||| || || ||| | |||||||
Sbjct: 653476 aggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcg 653417
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
| ||| || |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 653416 tggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcg 653357
Query: 1532 aggccatgctcatcgcccacccc 1554
||||| | ||| || ||||||||
Sbjct: 653356 aggccgtcctcctctcccacccc 653334
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 109 bits (55), Expect = 6e-021
Identities = 121/143 (84%)
Strand = Plus / Minus
Query: 1412 aggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcg 1471
||||||||||||||||||| ||| |||||||| |||||| || || ||| | |||||||
Sbjct: 4333832 aggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcg 4333773
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
| ||| || |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 4333772 tggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcg 4333713
Query: 1532 aggccatgctcatcgcccacccc 1554
||||| | ||| || ||||||||
Sbjct: 4333712 aggccgtcctcctctcccacccc 4333690
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 681 gctgcctgaggcggcggcggc 701
|||||||||||||||||||||
Sbjct: 7513673 gctgcctgaggcggcggcggc 7513693
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 109 bits (55), Expect = 6e-021
Identities = 121/143 (84%)
Strand = Plus / Minus
Query: 1412 aggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcg 1471
||||||||||||||||||| ||| |||||||| |||||| || || ||| | |||||||
Sbjct: 11681194 aggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcg 11681135
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
| ||| || |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 11681134 tggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcg 11681075
Query: 1532 aggccatgctcatcgcccacccc 1554
||||| | ||| || ||||||||
Sbjct: 11681074 aggccgtcctcctctcccacccc 11681052
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 681 gctgcctgaggcggcggcggc 701
|||||||||||||||||||||
Sbjct: 14861035 gctgcctgaggcggcggcggc 14861055
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1446 cgacgacggcgacgagatcttcat 1469
||||||||||||||| ||||||||
Sbjct: 31744293 cgacgacggcgacgacatcttcat 31744316
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 tgctcccgcctcggcgccgc 473
||||||||||||||||||||
Sbjct: 23852422 tgctcccgcctcggcgccgc 23852441
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 6229024 gcgtcgccgtcgtcgccacg 6229043
>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08,
complete sequence
Length = 141899
Score = 109 bits (55), Expect = 6e-021
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 1412 aggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcg 1471
||||||||||||||||||| ||| |||||||| |||||| || || ||| | |||||||
Sbjct: 47113 aggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcg 47172
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
| ||| || |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 47173 tggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcg 47232
Query: 1532 aggccatgctcatcgcccacccc 1554
||||| | ||| || ||||||||
Sbjct: 47233 aggccgtcctcctctcccacccc 47255
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 109 bits (55), Expect = 6e-021
Identities = 121/143 (84%)
Strand = Plus / Minus
Query: 1412 aggggtggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcg 1471
||||||||||||||||||| ||| |||||||| |||||| || || ||| | |||||||
Sbjct: 14125834 aggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcg 14125775
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
| ||| || |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 14125774 tggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcg 14125715
Query: 1532 aggccatgctcatcgcccacccc 1554
||||| | ||| || ||||||||
Sbjct: 14125714 aggccgtcctcctctcccacccc 14125692
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 681 gctgcctgaggcggcggcggc 701
|||||||||||||||||||||
Sbjct: 17844977 gctgcctgaggcggcggcggc 17844997
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1446 cgacgacggcgacgagatcttcat 1469
||||||||||||||| ||||||||
Sbjct: 35011087 cgacgacggcgacgacatcttcat 35011110
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 tgctcccgcctcggcgccgc 473
||||||||||||||||||||
Sbjct: 26887066 tgctcccgcctcggcgccgc 26887085
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 6148535 gcgtcgccgtcgtcgccacg 6148516
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 6139086 gcgtcgccgtcgtcgccacg 6139067
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 588 cgccggcgtcgccgtcgtcgccac 611
||||| ||||||||||||||||||
Sbjct: 3874555 cgccgccgtcgccgtcgtcgccac 3874532
>gb|CB660533.1|CB660533 OSJNEd02G15.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02G15 5', mRNA sequence
Length = 855
Score = 99.6 bits (50), Expect = 6e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 345 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 404
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 405 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 464
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| || ||||||| ||||||||| ||||| || |||||||||||||| | || || |||
Sbjct: 465 tatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatac 524
Query: 1501 aaggggttccaagt 1514
||||||||||||||
Sbjct: 525 aaggggttccaagt 538
Score = 40.1 bits (20), Expect = 4.5
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1152 cgccgtgctcggacagggttatgggatgacagaggc 1187
|||||| || |||||||| ||||||||||| |||||
Sbjct: 176 cgccgtcctgggacaggggtatgggatgactgaggc 211
>gb|CB660534.1|CB660534 OSJNEd02G15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02G15 3', mRNA sequence
Length = 729
Score = 99.6 bits (50), Expect = 6e-018
Identities = 158/194 (81%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 722 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 663
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 662 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 603
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| || ||||||| ||||||||| ||||| || |||||||||||||| | || || |||
Sbjct: 602 tatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatac 543
Query: 1501 aaggggttccaagt 1514
||||||||||||||
Sbjct: 542 aaggggttccaagt 529
>gb|CB667032.1|CB667032 OSJNEd14C22.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14C22 3', mRNA sequence
Length = 812
Score = 99.6 bits (50), Expect = 6e-018
Identities = 158/194 (81%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 787 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 728
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 727 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 668
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| || ||||||| ||||||||| ||||| || |||||||||||||| | || || |||
Sbjct: 667 tatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatac 608
Query: 1501 aaggggttccaagt 1514
||||||||||||||
Sbjct: 607 aaggggttccaagt 594
>gb|CB669744.1|CB669744 OSJNEe02H12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02H12 3', mRNA sequence
Length = 799
Score = 99.6 bits (50), Expect = 6e-018
Identities = 158/194 (81%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 744 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 685
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 684 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 625
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| || ||||||| ||||||||| ||||| || |||||||||||||| | || || |||
Sbjct: 624 tatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatac 565
Query: 1501 aaggggttccaagt 1514
||||||||||||||
Sbjct: 564 aaggggttccaagt 551
>gb|CB673005.1|CB673005 OSJNEe07F05.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07F05 3', mRNA sequence
Length = 734
Score = 99.6 bits (50), Expect = 6e-018
Identities = 158/194 (81%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 724 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 665
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 664 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 605
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| || ||||||| ||||||||| ||||| || |||||||||||||| | || || |||
Sbjct: 604 tatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatac 545
Query: 1501 aaggggttccaagt 1514
||||||||||||||
Sbjct: 544 aaggggttccaagt 531
>dbj|AK068985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002B16, full
insert sequence
Length = 2055
Score = 99.6 bits (50), Expect = 6e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 1318 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 1377
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 1378 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 1437
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| || ||||||| ||||||||| ||||| || |||||||||||||| | || || |||
Sbjct: 1438 tatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatac 1497
Query: 1501 aaggggttccaagt 1514
||||||||||||||
Sbjct: 1498 aaggggttccaagt 1511
Score = 58.0 bits (29), Expect = 2e-005
Identities = 182/233 (78%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
||||||| ||||| || || ||||| |||||||| || || |||||||||| || ||||
Sbjct: 713 acgacgtcgtcgccctcccttactcctccggcaccaccggcttgcccaagggcgtcatgc 772
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| | ||||| | || || |||||||| ||||||| || ||||| || ||||||||||
Sbjct: 773 tcacccaccgcagcctcgtcaccagcgtcgcgcagcaggtggacggggagaacccgaacc 832
Query: 836 tccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgc 895
| ||||| || ||| ||||| || || ||| ||||||| |||||||| | |||||||
Sbjct: 833 tgtacttcaggagggaggacgtggtgctgtgcttgctgccgctgttccacatctactcgc 892
Query: 896 tgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctcgtgatcatg 948
| ||||| | |||||| ||| |||| ||||| ||||| |||||||||||
Sbjct: 893 tcaactccgtgctgctggcggggctgcgagccgggtcggcgatcgtgatcatg 945
Score = 40.1 bits (20), Expect = 4.5
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1152 cgccgtgctcggacagggttatgggatgacagaggc 1187
|||||| || |||||||| ||||||||||| |||||
Sbjct: 1149 cgccgtcctgggacaggggtatgggatgactgaggc 1184
>gb|CB654377.1|CB654377 OSJNEc06K19.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc06K19 3', mRNA sequence
Length = 759
Score = 97.6 bits (49), Expect = 2e-017
Identities = 157/193 (81%)
Strand = Plus / Minus
Query: 1322 accagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaacc 1381
||||| ||||||||||||||||| |||| | || | |||||||| || || || |||
Sbjct: 759 accagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgacc 700
Query: 1382 cggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattgggt 1441
||||| | ||| ||| ||||||||| || || ||||||||||| ||||||||||| |
Sbjct: 699 cggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggtt 640
Query: 1442 acgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtaca 1501
| || ||||||| ||||||||| ||||| || |||||||||||||| | || || ||||
Sbjct: 639 atgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaataca 580
Query: 1502 aggggttccaagt 1514
|||||||||||||
Sbjct: 579 aggggttccaagt 567
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0437G01
Length = 147101
Score = 93.7 bits (47), Expect = 3e-016
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
|||||||||| ||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 146236 acgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgc 146295
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaaccc 830
| ||||||| | ||| || ||||||||||||| ||||||||||| |||||
Sbjct: 146296 taacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaaccc 146350
Score = 58.0 bits (29), Expect = 2e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1066 gacctctcgtcggtgcgcatggtcatctcgggggccgcgcccatgggcaagga 1118
||||||||||||||||| ||||| |||| || || |||||||||||||||||
Sbjct: 146586 gacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaagga 146638
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 533 ccggcgccaccgtcgtcatcaccgag 558
||||||||||||||||||||||||||
Sbjct: 146044 ccggcgccaccgtcgtcatcaccgag 146069
Score = 48.1 bits (24), Expect = 0.019
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 289 tgcctcatcgacggcgccacgggcgaaacgctcaccttcggcgacgtggaccgcctgtca 348
|||||||||||||| ||||| |||| |||||||| || |||||| |||||||||||
Sbjct: 145797 tgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcc 145856
Query: 349 cgacgcgtcgcggccg 364
|| ||| |||| ||||
Sbjct: 145857 cgccgcctcgccgccg 145872
>gb|CB655451.1|CB655451 OSJNEc08O09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08O09 3', mRNA sequence
Length = 739
Score = 91.7 bits (46), Expect = 1e-015
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 738 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 679
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 678 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 619
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaaggagctcatcaagtac 1500
|| || ||||||| ||||||||| ||||| || | |||||||||||| | || || |||
Sbjct: 618 tatgttgacgacgacgacgagattttcattgttgtccggctcaaggaaataataaaatac 559
Query: 1501 aaggggttccaagt 1514
||||||||||||||
Sbjct: 558 aaggggttccaagt 545
>gb|CB656113.1|CB656113 OSJNEc10B07.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10B07 3', mRNA sequence
Length = 769
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 692 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 633
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 632 cggctcaaggaaataataaaatacaaggggttccaagt 595
>gb|CB664984.1|CB664984 OSJNEd11A15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11A15 3', mRNA sequence
Length = 755
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 668 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 609
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 608 cggctcaaggaaataataaaatacaaggggttccaagt 571
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 4025983 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 4025924
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 4025923 cggctcaaggaaataataaaatacaaggggttccaagt 4025886
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcagggg 1349
|||||| ||||||||||||||||| ||||
Sbjct: 4028882 aaccagtccggggagatttgcatccgggg 4028854
Score = 40.1 bits (20), Expect = 4.5
Identities = 104/132 (78%)
Strand = Plus / Minus
Query: 817 gacggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgccc 876
||||| || ||||||||||| ||||| || ||| ||||| || || ||| |||||||
Sbjct: 4030344 gacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccg 4030285
Query: 877 atgttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||| | |||||||| ||||| | |||||| ||| |||| ||||| |||||
Sbjct: 4030284 ctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcg 4030225
Query: 937 ctcgtgatcatg 948
|||||||||||
Sbjct: 4030224 atcgtgatcatg 4030213
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0460H04
Length = 166490
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 94151 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 94092
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 94091 cggctcaaggaaataataaaatacaaggggttccaagt 94054
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcagggg 1349
|||||| ||||||||||||||||| ||||
Sbjct: 97050 aaccagtccggggagatttgcatccgggg 97022
Score = 40.1 bits (20), Expect = 4.5
Identities = 104/132 (78%)
Strand = Plus / Minus
Query: 817 gacggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgccc 876
||||| || ||||||||||| ||||| || ||| ||||| || || ||| |||||||
Sbjct: 98512 gacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccg 98453
Query: 877 atgttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||| | |||||||| ||||| | |||||| ||| |||| ||||| |||||
Sbjct: 98452 ctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcg 98393
Query: 937 ctcgtgatcatg 948
|||||||||||
Sbjct: 98392 atcgtgatcatg 98381
>gb|AACV01014711.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014711, whole
genome shotgun sequence
Length = 36092
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 34108 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 34167
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 34168 cggctcaaggaaataataaaatacaaggggttccaagt 34205
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1321 aaccagcccggggagatttgcatcagggg 1349
|||||| ||||||||||||||||| ||||
Sbjct: 31209 aaccagtccggggagatttgcatccgggg 31237
Score = 40.1 bits (20), Expect = 4.5
Identities = 104/132 (78%)
Strand = Plus / Plus
Query: 817 gacggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgccc 876
||||| || ||||||||||| ||||| || ||| ||||| || || ||| |||||||
Sbjct: 29747 gacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccg 29806
Query: 877 atgttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||| | |||||||| ||||| | |||||| ||| |||| ||||| |||||
Sbjct: 29807 ctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcg 29866
Query: 937 ctcgtgatcatg 948
|||||||||||
Sbjct: 29867 atcgtgatcatg 29878
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 7903325 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 7903266
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 7903265 cggctcaaggaaataataaaatacaaggggttccaagt 7903228
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcagggg 1349
|||||| ||||||||||||||||| ||||
Sbjct: 7906224 aaccagtccggggagatttgcatccgggg 7906196
Score = 40.1 bits (20), Expect = 4.5
Identities = 104/132 (78%)
Strand = Plus / Minus
Query: 817 gacggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgccc 876
||||| || ||||||||||| ||||| || ||| ||||| || || ||| |||||||
Sbjct: 7907686 gacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccg 7907627
Query: 877 atgttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||| | |||||||| ||||| | |||||| ||| |||| ||||| |||||
Sbjct: 7907626 ctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcg 7907567
Query: 937 ctcgtgatcatg 948
|||||||||||
Sbjct: 7907566 atcgtgatcatg 7907555
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 25602062 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 25602003
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 25602002 cggctcaaggaaataataaaatacaaggggttccaagt 25601965
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcagggg 1349
|||||| ||||||||||||||||| ||||
Sbjct: 25604961 aaccagtccggggagatttgcatccgggg 25604933
Score = 40.1 bits (20), Expect = 4.5
Identities = 104/132 (78%)
Strand = Plus / Minus
Query: 817 gacggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgccc 876
||||| || ||||||||||| ||||| || ||| ||||| || || ||| |||||||
Sbjct: 25606423 gacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccg 25606364
Query: 877 atgttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||| | |||||||| ||||| | |||||| ||| |||| ||||| |||||
Sbjct: 25606363 ctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcg 25606304
Query: 937 ctcgtgatcatg 948
|||||||||||
Sbjct: 25606303 atcgtgatcatg 25606292
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 12483161 gcgttcgtcgtggcgtccgg 12483180
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 586 ctcgccggcgtcgccgtcgtcgcc 609
||||||| ||||||||||||||||
Sbjct: 7947849 ctcgccgtcgtcgccgtcgtcgcc 7947872
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 91.7 bits (46), Expect = 1e-015
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 26560498 tggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgac 26560439
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || || |||||||||||||||||
Sbjct: 26560438 cggctcaaggaaataataaaatacaaggggttccaagt 26560401
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1321 aaccagcccggggagatttgcatcagggg 1349
|||||| ||||||||||||||||| ||||
Sbjct: 26563397 aaccagtccggggagatttgcatccgggg 26563369
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 11410266 gccacgggcgacggcgcagag 11410246
Score = 40.1 bits (20), Expect = 4.5
Identities = 104/132 (78%)
Strand = Plus / Minus
Query: 817 gacggcgacaacccgaacctccacttccgggaggacgacgtcgtcctctgcgtgctgccc 876
||||| || ||||||||||| ||||| || ||| ||||| || || ||| |||||||
Sbjct: 26564859 gacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccg 26564800
Query: 877 atgttccacgtgtactcgctgcactccatcctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||| | |||||||| ||||| | |||||| ||| |||| ||||| |||||
Sbjct: 26564799 ctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcg 26564740
Query: 937 ctcgtgatcatg 948
|||||||||||
Sbjct: 26564739 atcgtgatcatg 26564728
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 12775025 gcgttcgtcgtggcgtccgg 12775044
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 586 ctcgccggcgtcgccgtcgtcgcc 609
||||||| ||||||||||||||||
Sbjct: 7965279 ctcgccgtcgtcgccgtcgtcgcc 7965302
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 466 ggcgccgccgccaccacggc 485
||||||||||||||||||||
Sbjct: 1092952 ggcgccgccgccaccacggc 1092933
>gb|CB663059.1|CB663059 OSJNEd07J18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07J18 3', mRNA sequence
Length = 701
Score = 87.7 bits (44), Expect = 2e-014
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 1399 accatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcgac 1458
||||||||| || ||| ||||||||||| ||||||||||| || || ||||||| ||||
Sbjct: 615 accatcgacaaggggggttggctgcacacaggagacattggttatgttgacgacgacgac 556
Query: 1459 gagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||| ||||| || |||||| ||||||| | || || |||||||||||||||||
Sbjct: 555 gagattttcattgttgaccgggtcaaggaaataataaaatacaaggggttccaagt 500
>gb|CB655450.1|CB655450 OSJNEc08O09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08O09 5', mRNA sequence
Length = 743
Score = 85.7 bits (43), Expect = 9e-014
Identities = 136/167 (81%)
Strand = Plus / Plus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 570 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 629
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 630 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 689
Query: 1441 tacgtcgacgacggcgacgagatcttcatcgtcgaccggctcaagga 1487
|| || ||||||| ||||||||| ||||| || ||||||||||||||
Sbjct: 690 tatgttgacgacgacgacgagattttcattgttgaccggctcaagga 736
Score = 50.1 bits (25), Expect = 0.005
Identities = 121/153 (79%)
Strand = Plus / Plus
Query: 796 accagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgggaggacgac 855
|||||||| ||||||| || ||||| || ||||||||||| ||||| || ||| |||
Sbjct: 45 accagcgtcgcgcagcaggtggacggggagaacccgaacctgtacttcaggagggaggac 104
Query: 856 gtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatcctgctgtgc 915
|| || || ||| ||||||| |||||||| | |||||||| ||||| | ||||||
Sbjct: 105 gtggtgctgtgcttgctgccgctgttccacatctactcgctcaactccgtgctgctggcg 164
Query: 916 gggatgcgcgccggcgcggcgctcgtgatcatg 948
||| |||| ||||| ||||| |||||||||||
Sbjct: 165 gggctgcgagccgggtcggcgatcgtgatcatg 197
Score = 40.1 bits (20), Expect = 4.5
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1152 cgccgtgctcggacagggttatgggatgacagaggc 1187
|||||| || |||||||| ||||||||||| |||||
Sbjct: 401 cgccgtcctgggacaggggtatgggatgactgaggc 436
>gb|CB655488.1|CB655488 OSJNEc08P15.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08P15 5', mRNA sequence
Length = 755
Score = 71.9 bits (36), Expect = 1e-009
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 1153 gccgtgctcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatg 1212
||||| |||||||||||||| || ||||| ||||| || || ||||| | |||||| ||
Sbjct: 524 gccgtcctcggacagggttacggtatgactgaggctgggccagtgctggcaatgtgcctg 583
Query: 1213 gcgtttgccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaat 1272
||||||||||||||||| || ||| |||||||| | ||||| || |||||| | ||
Sbjct: 584 gcgtttgccaaggagcccttcaaggttaagtccgggtcgtgcggtacagtggtgcgcaac 643
Query: 1273 gccgagctaaagatcatcgacccggagaccgg 1304
|| ||||| |||||| ||||||| || |||||
Sbjct: 644 gcggagctgaagatcgtcgaccccgacaccgg 675
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 452 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 498
>gb|CV152484.1|CV152484 LS361-S.SEQ Cold stressed rice cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 627
Score = 67.9 bits (34), Expect = 2e-008
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 1417 tggctgcacaccggagacattgggtacgtcgacgacggcgacgagatcttcatcgtcgac 1476
||||||||||| ||||||||||| || | ||||||| ||||||||| |||| | |||
Sbjct: 1 tggctgcacacaggagacattggttatgntgacgacgacgacgagattntcattgntgac 60
Query: 1477 cggctcaaggagctcatcaagtacaaggggttccaagt 1514
||||||||||| | || | |||||||||||||||||
Sbjct: 61 cggctcaaggaaataatggantacaaggggttccaagt 98
>gb|AACV01005227.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005227, whole
genome shotgun sequence
Length = 28475
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Plus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 27253 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 27312
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 27313 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 27372
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 27373 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 27432
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 27433 ctgctgtgcgcggtgcgcgccggcgcggcg 27462
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 26686 acggtgttccggtccaagcttccggacatcgacatccc 26723
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 67.9 bits (34), Expect = 2e-008
Identities = 166/210 (79%)
Strand = Plus / Minus
Query: 727 gcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgt 786
|||||||||| |||||| ||||||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 15213526 gcgctgccgttctcgtcgggcacgacgggcttgcccaagggcgtggtgctgacgcacagg 15213467
Query: 787 gggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacctccacttccgg 846
| | || | |||||||||||| || |||||||| ||||||||||| ||| | |
Sbjct: 15213466 agcgtcgtgtcgggcgtggcgcagcaggtggacggcgagaacccgaacctgcacatgggt 15213407
Query: 847 gaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgctgcactccatc 906
| | |||||| | || ||||||||||| |||||||| | | |||||| ||||| |
Sbjct: 15213406 gccggcgacgtggcgctgtgcgtgctgccgctgttccacatcttctcgctcaactccgtg 15213347
Query: 907 ctgctgtgcgggatgcgcgccggcgcggcg 936
|||||||||| | |||||||||||||||||
Sbjct: 15213346 ctgctgtgcgcggtgcgcgccggcgcggcg 15213317
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 15211226 caggtggtgttctacaagaggctacacaag 15211197
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 190 acggtgttccgctcgacgcttccggacatcgccatccc 227
||||||||||| || | |||||||||||||| ||||||
Sbjct: 15214093 acggtgttccggtccaagcttccggacatcgacatccc 15214056
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 13122315 gccaccgtcgtcatcaccga 13122334
>gb|AU096471.1|AU096471 AU096471 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S13787, mRNA sequence
Length = 722
Score = 63.9 bits (32), Expect = 3e-007
Identities = 79/92 (85%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1455 cgacgagatcttcatcgtcgaccggctcaaggagctcatcaagta-caaggggttccaag 1513
|||||||||||||||||| ||| | ||||||||| |||||||||| |||||||||||| |
Sbjct: 38 cgacgagatcttcatcgtggacag-ctcaaggagatcatcaagtaccaaggggttccagg 96
Query: 1514 tcgctccggcggagctcgaggccatgctcatc 1545
| | ||||| ||||| ||||| ||||||||
Sbjct: 97 tgccaccggccgagctggaggcgctgctcatc 128
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 228 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 284
>gb|AU225532.1|AU225532 AU225532 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0497, mRNA sequence
Length = 433
Score = 61.9 bits (31), Expect = 1e-006
Identities = 115/143 (80%)
Strand = Plus / Plus
Query: 1321 aaccagcccggggagatttgcatcaggggcaagcagttgatgaaagggtacctcaacaac 1380
|||||| ||||||||||||||||| |||| | || | |||||||| || || || ||
Sbjct: 290 aaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgac 349
Query: 1381 ccggaggcaacggcgaagaccatcgactcggaggggtggctgcacaccggagacattggg 1440
|||||| | ||| ||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 350 ccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggt 409
Query: 1441 tacgtcgacgacggcgacgagat 1463
|| || ||||||| |||||||||
Sbjct: 410 tatgttgacgacgacgacgagat 432
>gb|AU161971.1|AU161971 AU161971 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S6529, mRNA sequence
Length = 408
Score = 60.0 bits (30), Expect = 5e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 48 atcaccgaggatgagatcaagaaattcgttgcaaaanaggtggtgttctacaagagg 104
>gb|AU161713.1|AU161713 AU161713 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5138, mRNA sequence
Length = 333
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 48 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 104
>gb|AU174808.1|AU174808 AU174808 Rice cDNA from leaf Oryza sativa (japonica cultivar-group)
cDNA clone F10403, mRNA sequence
Length = 414
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 52 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 108
>gb|CB667031.1|CB667031 OSJNEd14C22.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14C22 5', mRNA sequence
Length = 602
Score = 58.0 bits (29), Expect = 2e-005
Identities = 182/233 (78%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
||||||| ||||| || || ||||| |||||||| || || |||||||||| || ||||
Sbjct: 208 acgacgtcgtcgccctcccttactcctccggcaccaccggcttgcccaagggcgtcatgc 267
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| | ||||| | || || |||||||| ||||||| || ||||| || ||||||||||
Sbjct: 268 tcacccaccgcagcctcgtcaccagcgtcgcgcagcaggtggacggggagaacccgaacc 327
Query: 836 tccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgc 895
| ||||| || ||| ||||| || || ||| ||||||| |||||||| | |||||||
Sbjct: 328 tgtacttcaggagggaggacgtggtgctgtgcttgctgccgctgttccacatctactcgc 387
Query: 896 tgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctcgtgatcatg 948
| ||||| | |||||| ||| |||| ||||| ||||| |||||||||||
Sbjct: 388 tcaactccgtgctgctggcggggctgcgagccgggtcggcgatcgtgatcatg 440
>gb|CV722521.1|CV722521 YTPSP--01-K02.b1 TPSP-overexpression transgenic rice yeast two hybrid
lambda phage cDNA library (YTPSP) Oryza sativa (japonica
cultivar-group) cDNA clone YTPSP--01-K02, mRNA sequence
Length = 515
Score = 58.0 bits (29), Expect = 2e-005
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
||||||||||| ||||||||| | | ||| || ||| ||||||||||||||||||||
Sbjct: 496 atcaccgaggatgagatcaagaaattcgttgcaaaagaggtggtgttctacaagagg 440
>dbj|AK067261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G06, full
insert sequence
Length = 2720
Score = 58.0 bits (29), Expect = 2e-005
Identities = 182/233 (78%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
||||||| ||||| || || ||||| |||||||| || || |||||||||| || ||||
Sbjct: 663 acgacgtcgtcgccctcccttactcctccggcaccaccggcttgcccaagggcgtcatgc 722
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| | ||||| | || || |||||||| ||||||| || ||||| || ||||||||||
Sbjct: 723 tcacccaccgcagcctcgtcaccagcgtcgcgcagcaggtggacggggagaacccgaacc 782
Query: 836 tccacttccgggaggacgacgtcgtcctctgcgtgctgcccatgttccacgtgtactcgc 895
| ||||| || ||| ||||| || || ||| ||||||| |||||||| | |||||||
Sbjct: 783 tgtacttcaggagggaggacgtggtgctgtgcttgctgccgctgttccacatctactcgc 842
Query: 896 tgcactccatcctgctgtgcgggatgcgcgccggcgcggcgctcgtgatcatg 948
| ||||| | |||||| ||| |||| ||||| ||||| |||||||||||
Sbjct: 843 tcaactccgtgctgctggcggggctgcgagccgggtcggcgatcgtgatcatg 895
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1321 aaccagcccggggagatttgcatcagggg 1349
|||||| ||||||||||||||||| ||||
Sbjct: 1268 aaccagtccggggagatttgcatccgggg 1296
>gb|CB638383.1|CB638383 OSJNEa06J20.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa06J20 5', mRNA sequence
Length = 595
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 433 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 479
>dbj|AK105769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E07, full
insert sequence
Length = 2018
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 450 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 496
>dbj|AK107421.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-F07, full
insert sequence
Length = 1990
Score = 54.0 bits (27), Expect = 3e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1472 tcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgctccggcggagctcg 1531
||||||| |||||||||||||||||| |||||| ||||| || || || || |||||||
Sbjct: 1537 tcgaccgtctcaaggagctcatcaaggtcaagggcttccaggtagcgcccgctgagctcg 1596
Query: 1532 agg 1534
|||
Sbjct: 1597 agg 1599
>dbj|AK121384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I23, full
insert sequence
Length = 2001
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 445 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 491
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08,
complete sequence
Length = 133090
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 31975 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 31929
>gb|AACV01005814.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005814, whole
genome shotgun sequence
Length = 16947
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 8803 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 8757
>ref|XM_470183.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1698
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 348 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 394
>ref|NT_079917.2| Oryza sativa (japonica cultivar-group)
Length = 2507935
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 214850 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 214896
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 1281793 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 1281734
Query: 522 gg 523
||
Sbjct: 1281733 gg 1281732
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 1536418 gccacgggcgacggcgcagag 1536438
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 99652 atgaagggctacctcaacaacccggaggc 99680
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
complete sequence
Length = 138054
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 28026 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 28072
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 1829494 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 1829540
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 2875126 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 2875067
Query: 522 gg 523
||
Sbjct: 2875066 gg 2875065
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 585 gctcgccggcgtcgccgtcgtcgcca 610
|||||||| |||||||||||||||||
Sbjct: 5751697 gctcgccgccgtcgccgtcgtcgcca 5751672
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 1695233 atgaagggctacctcaacaacccggaggc 1695261
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 524 cggcggcctccggcgccaccgtcg 547
||||||||||||||||| ||||||
Sbjct: 955357 cggcggcctccggcgccgccgtcg 955334
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 2021856 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 2021902
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 3067488 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 3067429
Query: 522 gg 523
||
Sbjct: 3067428 gg 3067427
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 585 gctcgccggcgtcgccgtcgtcgcca 610
|||||||| |||||||||||||||||
Sbjct: 5944059 gctcgccgccgtcgccgtcgtcgcca 5944034
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 1887595 atgaagggctacctcaacaacccggaggc 1887623
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccaccac 482
||||||||||||||||||||
Sbjct: 27937569 ctcggcgccgccgccaccac 27937588
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 524 cggcggcctccggcgccaccgtcg 547
||||||||||||||||| ||||||
Sbjct: 1147719 cggcggcctccggcgccgccgtcg 1147696
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 1802385 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 1802431
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 2869328 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 2869269
Query: 522 gg 523
||
Sbjct: 2869268 gg 2869267
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 585 gctcgccggcgtcgccgtcgtcgcca 610
|||||||| |||||||||||||||||
Sbjct: 5721104 gctcgccgccgtcgccgtcgtcgcca 5721079
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 3123953 gccacgggcgacggcgcagag 3123973
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 1687187 atgaagggctacctcaacaacccggaggc 1687215
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccaccac 482
||||||||||||||||||||
Sbjct: 27009554 ctcggcgccgccgccaccac 27009573
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 524 cggcggcctccggcgccaccgtcg 547
||||||||||||||||| ||||||
Sbjct: 959020 cggcggcctccggcgccgccgtcg 958997
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 1802387 caccaccgccaacccgctcaatacccccgccgagatcgccaagcagg 1802433
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 2869217 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 2869158
Query: 522 gg 523
||
Sbjct: 2869157 gg 2869156
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 585 gctcgccggcgtcgccgtcgtcgcca 610
|||||||| |||||||||||||||||
Sbjct: 5721891 gctcgccgccgtcgccgtcgtcgcca 5721866
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 3123842 gccacgggcgacggcgcagag 3123862
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 1687189 atgaagggctacctcaacaacccggaggc 1687217
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccaccac 482
||||||||||||||||||||
Sbjct: 26918231 ctcggcgccgccgccaccac 26918250
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 524 cggcggcctccggcgccaccgtcg 547
||||||||||||||||| ||||||
Sbjct: 959022 cggcggcctccggcgccgccgtcg 958999
>gb|CV722651.1|CV722651 root--01-C15.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--01-C15, mRNA sequence
Length = 471
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 365 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 424
Query: 522 gg 523
||
Sbjct: 425 gg 426
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0038D20, from chromosome 3, complete sequence
Length = 165395
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 141173 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 141114
Query: 522 gg 523
||
Sbjct: 141113 gg 141112
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0016I15, complete sequence
Length = 166282
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 6704 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 6645
Query: 522 gg 523
||
Sbjct: 6644 gg 6643
>gb|AACV01005226.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005226, whole
genome shotgun sequence
Length = 9220
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1681 caggtggtgttctacaagaggctgcacaag 1710
||||||||||||||||||||||| ||||||
Sbjct: 9143 caggtggtgttctacaagaggctacacaag 9114
>gb|AACV01005890.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005890, whole
genome shotgun sequence
Length = 21973
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 462 cctcggcgccgccgccaccacggccaacccgctccacaccccgcccgagatcgccaagca 521
||||||||||| || |||||| | ||||||| | ||||||||| ||||||||||||||
Sbjct: 4067 cctcggcgccgtcggcaccaccgtcaacccggactacaccccgcgggagatcgccaagca 4126
Query: 522 gg 523
||
Sbjct: 4127 gg 4128
>gb|CB641159.1|CB641159 OSJNEa18B09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa18B09 5', mRNA sequence
Length = 555
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagca 521
|||||| |||||||||||| | ||||| ||||||||||||||||
Sbjct: 433 caccaccgccaacccgctcaatacccccgccgagatcgccaagca 477
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0030H07
Length = 168253
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 160681 tcccggcggcgctcgtcgtggcgtccggcggc 160650
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 103726 ggcgctcgtcgtggcgtccggcggc 103750
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0011G08
Length = 139490
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 35200 tcccggcggcgctcgtcgtggcgtccggcggc 35169
>gb|AACV01000221.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000221, whole
genome shotgun sequence
Length = 33216
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 27214 tcccggcggcgctcgtcgtggcgtccggcggc 27245
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 2951485 tcccggcggcgctcgtcgtggcgtccggcggc 2951454
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 15503438 gccacgggcgacggcgcagag 15503458
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 2894530 ggcgctcgtcgtggcgtccggcggc 2894554
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 43090103 gcaggcggcggcctccggcg 43090084
Score = 40.1 bits (20), Expect = 4.5
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 455 gctcccgcctcggcgccgccgccaccac 482
|||||| |||| ||||||||||||||||
Sbjct: 34846078 gctccctcctccgcgccgccgccaccac 34846051
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcgcca 610
||||| ||||||||||||||||||
Sbjct: 32800867 tcgcctgcgtcgccgtcgtcgcca 32800890
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcgtc 1578
||||||||||||||||||||
Sbjct: 28382462 tcgtcgacgccgccgtcgtc 28382443
>ref|NM_184423.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 969
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 800 tcccggcggcgctcgtcgtggcgtccggcggc 831
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 2951485 tcccggcggcgctcgtcgtggcgtccggcggc 2951454
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 2894530 ggcgctcgtcgtggcgtccggcggc 2894554
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 3014508 tcccggcggcgctcgtcgtggcgtccggcggc 3014477
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 2954913 ggcgctcgtcgtggcgtccggcggc 2954937
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 3014508 tcccggcggcgctcgtcgtggcgtccggcggc 3014477
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 2954913 ggcgctcgtcgtggcgtccggcggc 2954937
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 42370077 gcaggcggcggcctccggcg 42370058
Score = 40.1 bits (20), Expect = 4.5
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 455 gctcccgcctcggcgccgccgccaccac 482
|||||| |||| ||||||||||||||||
Sbjct: 34313341 gctccctcctccgcgccgccgccaccac 34313314
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcgcca 610
||||| ||||||||||||||||||
Sbjct: 32373790 tcgcctgcgtcgccgtcgtcgcca 32373813
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcgtc 1578
||||||||||||||||||||
Sbjct: 27964632 tcgtcgacgccgccgtcgtc 27964613
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1607 tcccggtggcgttcgtcgtggcgtccggcggc 1638
|||||| |||| ||||||||||||||||||||
Sbjct: 2953683 tcccggcggcgctcgtcgtggcgtccggcggc 2953652
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 15505656 gccacgggcgacggcgcagag 15505676
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 2896728 ggcgctcgtcgtggcgtccggcggc 2896752
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 43009433 gcaggcggcggcctccggcg 43009414
Score = 40.1 bits (20), Expect = 4.5
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 455 gctcccgcctcggcgccgccgccaccac 482
|||||| |||| ||||||||||||||||
Sbjct: 34765408 gctccctcctccgcgccgccgccaccac 34765381
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcgcca 610
||||| ||||||||||||||||||
Sbjct: 32720197 tcgcctgcgtcgccgtcgtcgcca 32720220
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcgtc 1578
||||||||||||||||||||
Sbjct: 28301792 tcgtcgacgccgccgtcgtc 28301773
>gb|CB653842.1|CB653842 OSJNEc05E03.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05E03 5', mRNA sequence
Length = 781
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 680 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 726
>gb|CB654030.1|CB654030 OSJNEc05J16.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05J16 5', mRNA sequence
Length = 734
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1081 cgcatggtcatctcgggggccgcgcccatgggcaaggagctgcagga 1127
||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 680 cgcatggtcatgtccggtgccgcgcccatggggaaggaccttcagga 726
>gb|AACV01018410.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018410,
whole genome shotgun sequence
Length = 22541
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 430 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 476
>ref|XM_482238.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 423
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 204 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 250
>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1297_D02
Length = 104470
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 91587 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 91541
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1198_B10
Length = 119768
Score = 46.1 bits (23), Expect = 0.073
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 477 caccacggccaacccgctccacaccccgcccgagatcgccaagcagg 523
|||||| |||||||||||| | ||| | ||||||||||||||||||
Sbjct: 9754 caccaccgccaacccgctcaataccaccaccgagatcgccaagcagg 9708
>gb|D41388.1|D41388 RICS3867A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 208
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1204 atgtgcatggcgtttgccaaggagcc 1229
|||||| |||||||||||||||||||
Sbjct: 33 atgtgcctggcgtttgccaaggagcc 58
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete
sequence
Length = 142114
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 119957 cgtcgacgacggcgacgagatc 119978
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
sequence
Length = 138824
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 16119 cgtcgacgacggcgacgagatc 16140
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0021B21, from chromosome 3, complete sequence
Length = 166777
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 585 gctcgccggcgtcgccgtcgtcgcca 610
|||||||| |||||||||||||||||
Sbjct: 109280 gctcgccgccgtcgccgtcgtcgcca 109305
>gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAa0019N10, from chromosome 10, complete sequence
Length = 148704
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 105466 ctcccgcctcggcgccgccgcc 105445
>gb|AACV01006092.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006092, whole
genome shotgun sequence
Length = 89684
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 585 gctcgccggcgtcgccgtcgtcgcca 610
|||||||| |||||||||||||||||
Sbjct: 51212 gctcgccgccgtcgccgtcgtcgcca 51187
>gb|AACV01016881.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016881, whole
genome shotgun sequence
Length = 16241
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 864 ctgcgtgctgcccatgttccac 885
||||||||||||||||||||||
Sbjct: 16110 ctgcgtgctgcccatgttccac 16089
>gb|AACV01021429.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021429, whole
genome shotgun sequence
Length = 35822
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 17045 ctcccgcctcggcgccgccgcc 17066
>gb|AACV01022022.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022022, whole
genome shotgun sequence
Length = 29242
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 17304 cgtcgacgacggcgacgagatc 17283
>gb|AACV01026033.1| Oryza sativa (japonica cultivar-group) Ctg026033, whole genome
shotgun sequence
Length = 12582
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 802 gtggcgcagctcgtcgacggcg 823
||||||||||||||||||||||
Sbjct: 7512 gtggcgcagctcgtcgacggcg 7533
>ref|NM_196220.1| Oryza sativa (japonica cultivar-group) hypothetical protein
(OSJNAa0019N10.22), mRNA
Length = 714
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 409 ctcccgcctcggcgccgccgcc 388
>ref|NM_197583.1| Oryza sativa (japonica cultivar-group) hypothetical protein
(OSJNBb0064P21.13), mRNA
Length = 426
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 342 cgtcgacgacggcgacgagatc 321
>ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1531814
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 277847 ctcccgcctcggcgccgccgcc 277826
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 2536861 cgtcgacgacggcgacgagatc 2536882
>ref|XM_479281.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1830
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 864 ctgcgtgctgcccatgttccac 885
||||||||||||||||||||||
Sbjct: 729 ctgcgtgctgcccatgttccac 750
>ref|NT_107189.1| Oryza sativa (japonica cultivar-group)
Length = 1905944
Score = 44.1 bits (22), Expect = 0.29
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 585 gctcgccggcgtcgccgtcgtcgcca 610
|||||||| |||||||||||||||||
Sbjct: 885437 gctcgccgccgtcgccgtcgtcgcca 885412
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1340_C08
Length = 192167
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 864 ctgcgtgctgcccatgttccac 885
||||||||||||||||||||||
Sbjct: 102286 ctgcgtgctgcccatgttccac 102265
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 864 ctgcgtgctgcccatgttccac 885
||||||||||||||||||||||
Sbjct: 14170020 ctgcgtgctgcccatgttccac 14169999
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 14483484 gcgtcgccgtcgtcgccacg 14483465
>gb|CH401392.1| Oryza sativa (japonica cultivar-group) scaffold000289 genomic
scaffold, whole genome shotgun sequence
Length = 18581
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 802 gtggcgcagctcgtcgacggcg 823
||||||||||||||||||||||
Sbjct: 8308 gtggcgcagctcgtcgacggcg 8329
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 8583071 cgtcgacgacggcgacgagatc 8583092
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 261185 ctcccgcctcggcgccgccgcc 261164
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 2615592 tcgccggcgtcgccgtcgtcg 2615572
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 864 ctgcgtgctgcccatgttccac 885
||||||||||||||||||||||
Sbjct: 12023537 ctgcgtgctgcccatgttccac 12023516
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 12412373 gcgtcgccgtcgtcgccacg 12412354
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 19448865 cgtcgacgacggcgacgagatc 19448886
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 11126979 ctcccgcctcggcgccgccgcc 11126958
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 13481386 tcgccggcgtcgccgtcgtcg 13481366
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 864 ctgcgtgctgcccatgttccac 885
||||||||||||||||||||||
Sbjct: 25422976 ctgcgtgctgcccatgttccac 25422955
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 3004344 gccggcgttcgtcggcaagctgcgg 3004368
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 2957803 gccggcgttcgtcggcaagctgcgg 2957827
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 453384 tcgccggcgtcgccgtcgtcg 453404
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 25811812 gcgtcgccgtcgtcgccacg 25811793
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 864 ctgcgtgctgcccatgttccac 885
||||||||||||||||||||||
Sbjct: 26557015 ctgcgtgctgcccatgttccac 26556994
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 3136120 gccggcgttcgtcggcaagctgcgg 3136144
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 3091286 gccggcgttcgtcggcaagctgcgg 3091310
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 3046042 gccggcgttcgtcggcaagctgcgg 3046066
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 466813 tcgccggcgtcgccgtcgtcg 466833
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 26870479 gcgtcgccgtcgtcgccacg 26870460
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 20614667 cgtcgacgacggcgacgagatc 20614688
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 11959784 ctcccgcctcggcgccgccgcc 11959763
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 14533617 tcgccggcgtcgccgtcgtcg 14533597
>gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
OSJNBb0091O09, complete sequence
Length = 123427
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 16762 ctcccgcctcggcgccgccgcc 16741
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1443 cgtcgacgacggcgacgagatc 1464
||||||||||||||||||||||
Sbjct: 20625939 cgtcgacgacggcgacgagatc 20625960
Score = 44.1 bits (22), Expect = 0.29
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 456 ctcccgcctcggcgccgccgcc 477
||||||||||||||||||||||
Sbjct: 11967124 ctcccgcctcggcgccgccgcc 11967103
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 14541859 tcgccggcgtcgccgtcgtcg 14541839
>gb|CB654376.1|CB654376 OSJNEc06K19.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc06K19 5', mRNA sequence
Length = 498
Score = 42.1 bits (21), Expect = 1.1
Identities = 96/121 (79%)
Strand = Plus / Plus
Query: 716 acgacgtggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatgc 775
||||||| ||||| || || ||||| |||||||| || || |||||||||| || ||||
Sbjct: 332 acgacgtcgtcgccctcccttactcctccggcaccaccggcttgcccaagggcgtcatgc 391
Query: 776 tgtcgcaccgtgggctggtaaccagcgtggcgcagctcgtcgacggcgacaacccgaacc 835
| | ||||| | || || |||||||| ||||||| || ||||| || ||||||||||
Sbjct: 392 tcacccaccgcagcctcgtcaccagcgtcgcgcagcaggtggacggggagaacccgaacc 451
Query: 836 t 836
|
Sbjct: 452 t 452
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
clone:P0043E01
Length = 154128
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 99652 atgaagggctacctcaacaacccggaggc 99680
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1567_G09
Length = 121388
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 20725 tcgccggcgtcgccgtcgtcg 20745
>dbj|AK109604.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F01, full
insert sequence
Length = 1468
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 528 tcgccggcgtcgccgtcgtcg 548
>dbj|AK110783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C04, full
insert sequence
Length = 1949
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 1320 atgaagggctacctcaacaacccggaggc 1348
>gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0075H14,
complete sequence
Length = 155420
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 147980 tcgccggcgtcgccgtcgtcg 147960
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
nbxb0072A12, complete sequence
Length = 149347
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 6080 tcgccggcgtcgccgtcgtcg 6060
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05,
complete sequence
Length = 101799
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 46855 gccacgggcgacggcgcagag 46875
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
OSJNBa0008E07, complete sequence
Length = 146679
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 77797 gccacgggcgacggcgcagag 77817
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0024L18
Length = 150128
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 137341 gccggcgttcgtcggcaagctgcgg 137365
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 92097 gccggcgttcgtcggcaagctgcgg 92121
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0455F03
Length = 158201
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 51110 gccggcgttcgtcggcaagctgcgg 51134
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 6276 gccggcgttcgtcggcaagctgcgg 6300
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0585H11
Length = 149371
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 68977 tcgccggcgtcgccgtcgtcg 68997
>ref|NT_107237.1| Oryza sativa (japonica cultivar-group)
Length = 2924261
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 874020 gccacgggcgacggcgcagag 874000
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 2238739 gcgttcgtcgtggcgtccgg 2238758
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1111C09
Length = 156393
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 63165 gccacgggcgacggcgcagag 63185
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1386G10
Length = 121827
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 97975 gccacgggcgacggcgcagag 97955
>gb|AACV01000217.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000217, whole
genome shotgun sequence
Length = 15397
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 13328 ggcgctcgtcgtggcgtccggcggc 13304
>gb|AACV01005801.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005801, whole
genome shotgun sequence
Length = 6628
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 5029 atgaagggctacctcaacaacccggaggc 5001
>gb|AACV01009508.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009508, whole
genome shotgun sequence
Length = 19219
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 681 gctgcctgaggcggcggcggc 701
|||||||||||||||||||||
Sbjct: 14652 gctgcctgaggcggcggcggc 14632
>gb|AACV01015031.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015031, whole
genome shotgun sequence
Length = 13398
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 2678 tcgccggcgtcgccgtcgtcg 2698
>gb|AACV01015209.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015209,
whole genome shotgun sequence
Length = 3261
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 365 gccggcgttcgtcggcaagctgcgg 389
>gb|AACV01015217.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015217, whole
genome shotgun sequence
Length = 40812
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 2554 gccggcgttcgtcggcaagctgcgg 2578
>gb|AACV01021583.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021583, whole
genome shotgun sequence
Length = 13107
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 2697 tcgccggcgtcgccgtcgtcg 2717
>gb|AACV01026136.1| Oryza sativa (japonica cultivar-group) Ctg026136, whole genome shotgun
sequence
Length = 15987
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 13367 gccacgggcgacggcgcagag 13347
>gb|AACV01026809.1| Oryza sativa (japonica cultivar-group) Ctg026809, whole genome
shotgun sequence
Length = 844
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 346 gccacgggcgacggcgcagag 326
>gb|AACV01027243.1| Oryza sativa (japonica cultivar-group) Ctg027243, whole genome
shotgun sequence
Length = 8464
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 3631 gccacgggcgacggcgcagag 3651
>gb|AACV01028117.1| Oryza sativa (japonica cultivar-group) Ctg028117, whole genome
shotgun sequence
Length = 6313
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 6245 gccacgggcgacggcgcagag 6225
>gb|AACV01028854.1| Oryza sativa (japonica cultivar-group) Ctg028854, whole genome
shotgun sequence
Length = 5065
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 1705 gccacgggcgacggcgcagag 1725
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 1265246 tcgccggcgtcgccgtcgtcg 1265226
>ref|XM_476391.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1468
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 528 tcgccggcgtcgccgtcgtcg 548
>ref|NT_079858.2| Oryza sativa (japonica cultivar-group)
Length = 2468003
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 681 gctgcctgaggcggcggcggc 701
|||||||||||||||||||||
Sbjct: 1095413 gctgcctgaggcggcggcggc 1095433
>ref|NT_079947.2| Oryza sativa (japonica cultivar-group)
Length = 1767736
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 531903 gccacgggcgacggcgcagag 531923
>ref|NT_107229.1| Oryza sativa (japonica cultivar-group)
Length = 1596128
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 1527246 gccacgggcgacggcgcagag 1527266
>ref|XM_493818.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1737
Score = 42.1 bits (21), Expect = 1.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1360 atgaaagggtacctcaacaacccggaggc 1388
||||| || ||||||||||||||||||||
Sbjct: 1192 atgaagggctacctcaacaacccggaggc 1220
>tpe|BN000628.1| TPA: Oryza sativa (japonica cultivar-group) prx99 gene for class III
peroxidase 99 precursor, exons 1-2
Length = 2722
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 2449 gccggcgttcgtcggcaagctgcgg 2473
>ref|NM_184413.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1086
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1614 ggcgttcgtcgtggcgtccggcggc 1638
|||| ||||||||||||||||||||
Sbjct: 870 ggcgctcgtcgtggcgtccggcggc 894
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 3092192 gccggcgttcgtcggcaagctgcgg 3092216
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 3047358 gccggcgttcgtcggcaagctgcgg 3047382
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 3002114 gccggcgttcgtcggcaagctgcgg 3002138
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 460750 tcgccggcgtcgccgtcgtcg 460770
>gb|CH401608.1| Oryza sativa (japonica cultivar-group) scaffold000743 genomic
scaffold, whole genome shotgun sequence
Length = 10271
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 9926 gccacgggcgacggcgcagag 9946
>gb|CH401423.1| Oryza sativa (japonica cultivar-group) scaffold000345 genomic scaffold,
whole genome shotgun sequence
Length = 16558
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 13367 gccacgggcgacggcgcagag 13347
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057
genomic scaffold, whole genome shotgun sequence
Length = 3236776
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 187595 gccggcgttcgtcggcaagctgcgg 187619
Score = 42.1 bits (21), Expect = 1.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 558 gccggcgttcgtcggcaaggtgcgg 582
||||||||||||||||||| |||||
Sbjct: 141054 gccggcgttcgtcggcaagctgcgg 141078
>gb|CH401218.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000055
genomic scaffold, whole genome shotgun sequence
Length = 1431804
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcg 607
|||||||||||||||||||||
Sbjct: 453384 tcgccggcgtcgccgtcgtcg 453404
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04,
complete sequence
Length = 164645
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 681 gctgcctgaggcggcggcggc 701
|||||||||||||||||||||
Sbjct: 41732 gctgcctgaggcggcggcggc 41752
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 42.1 bits (21), Expect = 1.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 607 gccacgggcgacggcgcagag 627
|||||||||||||||||||||
Sbjct: 12310319 gccacgggcgacggcgcagag 12310339
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 3900488 gcgtcgccgtcgtcgccacg 3900507
>gb|AQ328996.1|AQ328996 nbxb0044M21f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0044M21f, DNA sequence
Length = 604
Score = 40.1 bits (20), Expect = 4.5
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 672 ctcggcggcgctgcctgaggcggcggcggcca 703
||||||| |||||| ||||||||||||||||
Sbjct: 537 ctcggcgacgctgcacgaggcggcggcggcca 506
>gb|CZ558902.1|CZ558902 M0051860 AS_TRIM_TDNA_B1 Oryza sativa (japonica cultivar-group)
genomic clone M0051860, DNA sequence
Length = 285
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 459 ccgcctcggcgccgccgccaccac 482
|||||||| |||||||||||||||
Sbjct: 79 ccgcctcgccgccgccgccaccac 102
>gb|AU184583.1|AU184583 AU184583 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R3042, mRNA sequence
Length = 449
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1682 aggtggtgttctacaagagg 1701
||||||||||||||||||||
Sbjct: 2 aggtggtgttctacaagagg 21
>gb|AU223467.1|AU223467 AU223467 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S6529, mRNA sequence
Length = 451
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1682 aggtggtgttctacaagagg 1701
||||||||||||||||||||
Sbjct: 2 aggtggtgttctacaagagg 21
>gb|CB647131.1|CB647131 OSJNEb09O19.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09O19 5', mRNA sequence
Length = 838
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 436 gcgttcgtcgtggcgtccgg 455
>dbj|AP003998.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1113_H11,
*** SEQUENCING IN PROGRESS ***
Length = 74174
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 59109 gcgtcgccgtcgtcgccacg 59090
>dbj|AK059638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B01, full
insert sequence
Length = 1378
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 502 gccaccgtcgtcatcaccga 521
>dbj|AK065095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M12, full
insert sequence
Length = 2944
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 674 cggcggcgctgcctgaggcg 693
||||||||||||||||||||
Sbjct: 569 cggcggcgctgcctgaggcg 588
>dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077E20, full
insert sequence
Length = 813
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1446 cgacgacggcgacgagatcttcat 1469
||||||||||||||| ||||||||
Sbjct: 133 cgacgacggcgacgacatcttcat 156
>dbj|AK072492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131P12, full
insert sequence
Length = 1292
Score = 40.1 bits (20), Expect = 4.5
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 455 gctcccgcctcggcgccgccgccaccac 482
|||||| |||| ||||||||||||||||
Sbjct: 48 gctccctcctccgcgccgccgccaccac 75
>dbj|AK074022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074A15, full
insert sequence
Length = 3570
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 674 cggcggcgctgcctgaggcg 693
||||||||||||||||||||
Sbjct: 540 cggcggcgctgcctgaggcg 559
>dbj|AK099263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011E21, full
insert sequence
Length = 1502
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 88 gcaggcggcggcctccggcg 69
>dbj|AK099265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011G21, full
insert sequence
Length = 1502
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 88 gcaggcggcggcctccggcg 69
>dbj|AK108550.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E04, full
insert sequence
Length = 1963
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 tgctcccgcctcggcgccgc 473
||||||||||||||||||||
Sbjct: 316 tgctcccgcctcggcgccgc 335
>dbj|AK108930.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A05, full
insert sequence
Length = 955
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 524 cggcggcctccggcgccaccgtcg 547
||||||||||||||||| ||||||
Sbjct: 522 cggcggcctccggcgccgccgtcg 499
>dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C10, full
insert sequence
Length = 1849
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcgtc 1578
||||||||||||||||||||
Sbjct: 883 tcgtcgacgccgccgtcgtc 864
>dbj|AK110325.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-D06, full
insert sequence
Length = 2452
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 450 gcgttcgtcgtggcgtccgg 469
>dbj|AK121604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041O05, full
insert sequence
Length = 2503
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 451 gcgttcgtcgtggcgtccgg 470
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 141089
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 459 ccgcctcggcgccgccgccaccac 482
|||||||| |||||||||||||||
Sbjct: 75793 ccgcctcgccgccgccgccaccac 75816
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
sequence
Length = 149303
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccaccac 482
||||||||||||||||||||
Sbjct: 97231 ctcggcgccgccgccaccac 97250
>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20,
complete sequence
Length = 147108
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 44320 gcgtcgccgtcgtcgccacg 44301
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 34871 gcgtcgccgtcgtcgccacg 34852
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0473D02
Length = 146185
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 95390 gcgtcgccgtcgtcgccacg 95409
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 94587 gcgtcgccgtcgtcgccacg 94606
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0025F03
Length = 138042
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 23861 gcgtcgccgtcgtcgccacg 23880
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 23058 gcgtcgccgtcgtcgccacg 23077
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0435D08
Length = 148912
Score = 40.1 bits (20), Expect = 4.5
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 672 ctcggcggcgctgcctgaggcggcggcggcca 703
||||||| |||||| ||||||||||||||||
Sbjct: 50178 ctcggcgacgctgcacgaggcggcggcggcca 50209
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0503D09
Length = 144443
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 19070 gcgtcgccgtcgtcgccacg 19051
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0019A05
Length = 144255
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 75802 gcgttcgtcgtggcgtccgg 75821
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0039F24
Length = 132107
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 128546 gcgttcgtcgtggcgtccgg 128565
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 459 ccgcctcggcgccgccgccaccac 482
|||||||| |||||||||||||||
Sbjct: 470979 ccgcctcgccgccgccgccaccac 470956
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_F09
Length = 139371
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 102257 gccaccgtcgtcatcaccga 102276
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0046H10
Length = 155544
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 586 ctcgccggcgtcgccgtcgtcgcc 609
||||||| ||||||||||||||||
Sbjct: 72797 ctcgccgtcgtcgccgtcgtcgcc 72820
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0073C10, complete sequence
Length = 165350
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 98375 gcgtcgccgtcgtcgccacg 98394
>gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002128, whole
genome shotgun sequence
Length = 69109
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1559 tcgtcgacgccgccgtcgtc 1578
||||||||||||||||||||
Sbjct: 35920 tcgtcgacgccgccgtcgtc 35939
>gb|AACV01002436.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002436, whole
genome shotgun sequence
Length = 31351
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcgcca 610
||||| ||||||||||||||||||
Sbjct: 3992 tcgcctgcgtcgccgtcgtcgcca 4015
>gb|AACV01002571.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002571, whole
genome shotgun sequence
Length = 17833
Score = 40.1 bits (20), Expect = 4.5
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 455 gctcccgcctcggcgccgccgccaccac 482
|||||| |||| ||||||||||||||||
Sbjct: 1899 gctccctcctccgcgccgccgccaccac 1872
>gb|AACV01003125.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003125, whole
genome shotgun sequence
Length = 13273
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 10527 gcaggcggcggcctccggcg 10546
>gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005076, whole
genome shotgun sequence
Length = 21571
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 11955 gccaccgtcgtcatcaccga 11974
>gb|AACV01005769.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005769, whole
genome shotgun sequence
Length = 13883
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 524 cggcggcctccggcgccaccgtcg 547
||||||||||||||||| ||||||
Sbjct: 7677 cggcggcctccggcgccgccgtcg 7700
>gb|AACV01007655.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007655, whole
genome shotgun sequence
Length = 7572
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 463 ctcggcgccgccgccaccac 482
||||||||||||||||||||
Sbjct: 7343 ctcggcgccgccgccaccac 7324
>gb|AACV01008893.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008893,
whole genome shotgun sequence
Length = 2173
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 68 gcgtcgccgtcgtcgccacg 49
>gb|AACV01010199.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010199, whole
genome shotgun sequence
Length = 11181
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 tgctcccgcctcggcgccgc 473
||||||||||||||||||||
Sbjct: 3350 tgctcccgcctcggcgccgc 3369
>gb|AACV01010674.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010674, whole
genome shotgun sequence
Length = 7423
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1446 cgacgacggcgacgagatcttcat 1469
||||||||||||||| ||||||||
Sbjct: 4460 cgacgacggcgacgacatcttcat 4483
>gb|AACV01013437.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013437, whole
genome shotgun sequence
Length = 14003
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 586 ctcgccggcgtcgccgtcgtcgcc 609
||||||| ||||||||||||||||
Sbjct: 9884 ctcgccgtcgtcgccgtcgtcgcc 9861
>gb|AACV01013779.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013779, whole
genome shotgun sequence
Length = 9585
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1615 gcgttcgtcgtggcgtccgg 1634
||||||||||||||||||||
Sbjct: 7469 gcgttcgtcgtggcgtccgg 7488
>gb|AACV01016905.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016905, whole
genome shotgun sequence
Length = 47700
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 593 gcgtcgccgtcgtcgccacg 612
||||||||||||||||||||
Sbjct: 1418 gcgtcgccgtcgtcgccacg 1437
>gb|AACV01019159.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019159, whole
genome shotgun sequence
Length = 18116
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 674 cggcggcgctgcctgaggcg 693
||||||||||||||||||||
Sbjct: 8284 cggcggcgctgcctgaggcg 8303
>gb|AACV01019917.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019917, whole
genome shotgun sequence
Length = 13303
Score = 40.1 bits (20), Expect = 4.5
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 672 ctcggcggcgctgcctgaggcggcggcggcca 703
||||||| |||||| ||||||||||||||||
Sbjct: 11117 ctcggcgacgctgcacgaggcggcggcggcca 11148
>gb|AACV01023844.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023844, whole
genome shotgun sequence
Length = 14197
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 459 ccgcctcggcgccgccgccaccac 482
|||||||| |||||||||||||||
Sbjct: 3211 ccgcctcgccgccgccgccaccac 3234
>gb|AACV01025155.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025155, whole
genome shotgun sequence
Length = 75518
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1727 ccatccccaaggcgccatcc 1746
||||||||||||||||||||
Sbjct: 35080 ccatccccaaggcgccatcc 35099
>gb|AACV01027953.1| Oryza sativa (japonica cultivar-group) Ctg027953, whole genome
shotgun sequence
Length = 6611
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1659 gatcaagcagtacgtggcga 1678
||||||||||||||||||||
Sbjct: 3757 gatcaagcagtacgtggcga 3776
>gb|AACV01028383.1| Oryza sativa (japonica cultivar-group) Ctg028383, whole genome
shotgun sequence
Length = 5817
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1659 gatcaagcagtacgtggcga 1678
||||||||||||||||||||
Sbjct: 2198 gatcaagcagtacgtggcga 2179
>gb|AACV01028714.1| Oryza sativa (japonica cultivar-group) Ctg028714, whole genome
shotgun sequence
Length = 5247
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1539 gctcatcgcccaccccagca 1558
||||||||||||||||||||
Sbjct: 4596 gctcatcgcccaccccagca 4577
>gb|AACV01031891.1| Oryza sativa (japonica cultivar-group) Ctg031891, whole genome
shotgun sequence
Length = 2918
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1659 gatcaagcagtacgtggcga 1678
||||||||||||||||||||
Sbjct: 135 gatcaagcagtacgtggcga 154
>gb|AACV01033447.1| Oryza sativa (japonica cultivar-group) Ctg033447, whole genome
shotgun sequence
Length = 2374
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 ccacgggcgacggcgcagag 627
||||||||||||||||||||
Sbjct: 1827 ccacgggcgacggcgcagag 1846
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0660D08
Length = 146915
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 466 ggcgccgccgccaccacggc 485
||||||||||||||||||||
Sbjct: 69175 ggcgccgccgccaccacggc 69156
>ref|NM_189484.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1011
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 71 gcaggcggcggcctccggcg 52
>ref|NM_191080.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 912
Score = 40.1 bits (20), Expect = 4.5
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 455 gctcccgcctcggcgccgccgccaccac 482
|||||| |||| ||||||||||||||||
Sbjct: 17 gctccctcctccgcgccgccgccaccac 44
>ref|NM_191448.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 702
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 587 tcgccggcgtcgccgtcgtcgcca 610
||||| ||||||||||||||||||
Sbjct: 409 tcgcctgcgtcgccgtcgtcgcca 386
>ref|NM_192094.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1377
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcgtc 1578
||||||||||||||||||||
Sbjct: 761 tcgtcgacgccgccgtcgtc 742
>ref|XM_450166.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3570
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 674 cggcggcgctgcctgaggcg 693
||||||||||||||||||||
Sbjct: 540 cggcggcgctgcctgaggcg 559
>ref|XM_450167.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2944
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 674 cggcggcgctgcctgaggcg 693
||||||||||||||||||||
Sbjct: 569 cggcggcgctgcctgaggcg 588
>ref|XM_467145.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1378
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 538 gccaccgtcgtcatcaccga 557
||||||||||||||||||||
Sbjct: 502 gccaccgtcgtcatcaccga 521
>ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1389
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 463 ctcggcgccgccgccaccac 482
||||||||||||||||||||
Sbjct: 880 ctcggcgccgccgccaccac 899
>ref|XM_473336.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2241
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 tgctcccgcctcggcgccgc 473
||||||||||||||||||||
Sbjct: 706 tgctcccgcctcggcgccgc 725
>ref|XM_474414.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 447
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1446 cgacgacggcgacgagatcttcat 1469
||||||||||||||| ||||||||
Sbjct: 120 cgacgacggcgacgacatcttcat 143
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 tgctcccgcctcggcgccgc 473
||||||||||||||||||||
Sbjct: 663610 tgctcccgcctcggcgccgc 663629
>ref|NT_079867.2| Oryza sativa (japonica cultivar-group)
Length = 272063
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 588 cgccggcgtcgccgtcgtcgccac 611
||||| ||||||||||||||||||
Sbjct: 101536 cgccgccgtcgccgtcgtcgccac 101513
>ref|NT_079873.2| Oryza sativa (japonica cultivar-group)
Length = 5116111
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 586 ctcgccggcgtcgccgtcgtcgcc 609
||||||| ||||||||||||||||
Sbjct: 3656859 ctcgccgtcgtcgccgtcgtcgcc 3656882
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 519 gcaggcggcggcctccggcg 538
||||||||||||||||||||
Sbjct: 2718397 gcaggcggcggcctccggcg 2718378
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 40.1 bits (20), Expect = 4.5
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 455 gctcccgcctcggcgccgccgccaccac 482
|||||| |||| ||||||||||||||||
Sbjct: 9293461 gctccctcctccgcgccgccgccaccac 9293434
Score = 40.1 bits (20), Expect = 4.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 587 tcgccggcgtcgccgtcgtcgcca 610
||||| ||||||||||||||||||
Sbjct: 7248250 tcgcctgcgtcgccgtcgtcgcca 7248273
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1559 tcgtcgacgccgccgtcgtc 1578
||||||||||||||||||||
Sbjct: 2829845 tcgtcgacgccgccgtcgtc 2829826
>ref|NT_107076.1| Oryza sativa (japonica cultivar-group)
Length = 2702857
Score = 40.1 bits (20), Expect = 4.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 674 cggcggcgctgcctgaggcg 693
||||||||||||||||||||
Sbjct: 2563415 cggcggcgctgcctgaggcg 2563396
>ref|NT_107083.1| Oryza sativa (japonica cultivar-group)
Length = 598321
Score = 40.1 bits (20), Expect = 4.5
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 672 ctcggcggcgctgcctgaggcggcggcggcca 703
||||||| |||||| ||||||||||||||||
Sbjct: 344487 ctcggcgacgctgcacgaggcggcggcggcca 344518
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,349,744
Number of Sequences: 438736
Number of extensions: 4349744
Number of successful extensions: 57553
Number of sequences better than 10.0: 285
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 46096
Number of HSP's gapped (non-prelim): 11416
length of query: 1986
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1964
effective length of database: 2,790,767,724
effective search space: 5481067809936
effective search space used: 5481067809936
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)