BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3871878.2.1
(950 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-... 739 0.0
gb|CF323882.1|CF323882 HDN--05-A09.g1 OsHDAC1-overexpressin... 428 e-117
dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA... 424 e-116
ref|NM_190499.1| Oryza sativa (japonica cultivar-group), p... 418 e-114
dbj|AK062894.1| Oryza sativa (japonica cultivar-group) cDNA... 319 2e-084
gb|AACV01002640.1| Oryza sativa (japonica cultivar-group) c... 319 2e-084
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 319 2e-084
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 319 2e-084
dbj|AP003271.3| Oryza sativa (japonica cultivar-group) geno... 319 2e-084
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 319 2e-084
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 319 2e-084
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 319 2e-084
dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA... 291 3e-076
dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-... 291 3e-076
dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA... 157 1e-035
gb|CB656571.1|CB656571 OSJNEc11B09.r OSJNEc Oryza sativa (j... 151 8e-034
gb|CB653220.1|CB653220 OSJNEc04A21.f OSJNEc Oryza sativa (j... 149 3e-033
gb|CB662804.1|CB662804 OSJNEd07C16.f OSJNEd Oryza sativa (j... 149 3e-033
gb|CB663751.1|CB663751 OSJNEd09B06.f OSJNEd Oryza sativa (j... 149 3e-033
gb|CB674715.1|CB674715 OSJNEe09O17.f OSJNEe Oryza sativa (j... 149 3e-033
dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA... 149 3e-033
gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbar... 149 3e-033
gb|AACV01006352.1| Oryza sativa (japonica cultivar-group) c... 149 3e-033
dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-... 149 3e-033
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 149 3e-033
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-033
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-033
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 149 3e-033
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-033
dbj|AP003535.2| Oryza sativa (japonica cultivar-group) geno... 141 8e-031
gb|AACV01000881.1| Oryza sativa (japonica cultivar-group) c... 141 8e-031
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 141 8e-031
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 141 8e-031
gb|CB646118.1|CB646118 OSJNEb08F06.f OSJNEb Oryza sativa (j... 137 1e-029
gb|CB661723.1|CB661723 OSJNEd05A04.f OSJNEd Oryza sativa (j... 137 1e-029
dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA... 137 1e-029
dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-... 137 1e-029
gb|AC135929.2| Oryza sativa (japonica cultivar-group) chrom... 125 5e-026
gb|AACV01011960.1| Oryza sativa (japonica cultivar-group) c... 125 5e-026
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 125 5e-026
gb|CH401205.1| Oryza sativa (japonica cultivar-group) chrom... 125 5e-026
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 125 5e-026
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 125 5e-026
gb|CB679658.1|CB679658 OSJNEf03H02.f OSJNEf Oryza sativa (j... 107 1e-020
gb|CA758797.1|CA758797 BR030021000_PLATE_A07_49_051.ab1 OA ... 98 1e-017
gb|CB640033.1|CB640033 OSJNEa12P21.f OSJNEa Oryza sativa (j... 98 1e-017
gb|CF303741.1|CF303741 ABF1--03-B12.g1 ABF3-overexpressing ... 96 4e-017
gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydr... 82 6e-013
dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA... 82 6e-013
gb|CB661724.1|CB661724 OSJNEd05A04.r OSJNEd Oryza sativa (j... 76 4e-011
gb|CF311240.1|CF311240 ABF--06-G05.b1 ABF3-overexpressing t... 70 2e-009
gb|CV724307.1|CV724307 root--06-I17.g1 Rice root lambda pha... 70 2e-009
dbj|AP006268.4| Oryza sativa (japonica cultivar-group) geno... 68 9e-009
gb|AC135928.2| Oryza sativa (japonica cultivar-group) chrom... 68 9e-009
dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-... 68 9e-009
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 68 9e-009
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 68 9e-009
gb|AACV01003140.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NM_189516.1| Oryza sativa (japonica cultivar-group), p... 60 2e-006
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 60 2e-006
dbj|AP003228.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|CB654313.1|CB654313 OSJNEc06H06.f OSJNEc Oryza sativa (j... 58 9e-006
gb|AACV01017002.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|CB653221.1|CB653221 OSJNEc04A21.r OSJNEc Oryza sativa (j... 50 0.002
gb|CB666956.1|CB666956 OSJNEd14B05.r OSJNEd Oryza sativa (j... 50 0.002
gb|CB674716.1|CB674716 OSJNEe09O17.r OSJNEe Oryza sativa (j... 50 0.002
dbj|AP003895.1| Oryza sativa (japonica cultivar-group) chro... 44 0.14
dbj|AP004314.3| Oryza sativa (japonica cultivar-group) geno... 44 0.14
dbj|AP004338.4| Oryza sativa (japonica cultivar-group) geno... 44 0.14
gb|AACV01015135.1| Oryza sativa (japonica cultivar-group) c... 44 0.14
ref|XM_476555.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.14
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 44 0.14
gb|CH401219.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.14
>dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRNA for
UDP-glucuronic acid decarboxylase, complete cds
Length = 1404
Score = 739 bits (373), Expect = 0.0
Identities = 565/629 (89%)
Strand = Plus / Minus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
||||||||||||||| || ||||| || | |||||| |||||||||||||| ||||| ||
Sbjct: 909 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 850
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggcaatacgcacctc 120
||||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 849 gccatcatctagacacattcgagggccatatgtattgaaaatgcgagcaatgcgcacctc 790
Query: 121 aacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatc 180
||||||| |||| | ||||||||||| ||| ||||||| |||||||| |||||||| ||
Sbjct: 789 aacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccctcgtc 730
Query: 181 ataacagctcctaacaccaataggattaacgtgcccccagtatgactccttctgtggatg 240
|||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct: 729 ataacagctcctaacaccaataggattaacatgcccccagtaagtctccttctgtggatg 670
Query: 241 ctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcg 300
||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 669 ttcaagtggatctccataaacttcacttgtgctagttagcaagaaccttgcaccaattcg 610
Query: 301 ctttgccagacccaacatattcaaagttcccatgacatttgtcttgatcgtcttgattgg 360
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 609 ctttgccagacccaacatattcaaggttcccatgacattggtcttgatcgtcttgatggg 550
Query: 361 gttatacttgtaatgaacgggcgacgcggggcatgcgaggtggtagatccggtcgacata 420
||| |||||||| || || || ||||||||||| |||||||| ||||||||||| || |
Sbjct: 549 gttgtacttgtagtgcacaggggacgcggggcacgcgaggtgatagatccggtccacctc 490
Query: 421 aaagaggattggttcgactacatcgtggcggagcagctcgaaccgggggttccggaggtg 480
| ||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 489 gagcaggatgggctcgacgacatcgtggcggagcagctcgaacctggggttccggaggtg 430
Query: 481 gtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgctgtcccc 540
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 429 gtgcgcgacgttgtccttcctcccggtgaagaagttgtccaccacgatcacgctgtcccc 370
Query: 541 ctgctctaggagccggtcgacgaggtggctgccgacgaaccctgccccgcctgtgacgac 600
||||| || |||| |||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 369 ttgctccagcagcctgtcgacgaggtggctgccaacgaacccggcccctccggtgacgac 310
Query: 601 gacgcggcgctgcggcgggcggaagccgg 629
|||||||||| ||||||||||||| ||||
Sbjct: 309 gacgcggcgcggcggcgggcggaacccgg 281
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 249 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 190
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 189 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 130
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 129 gcgctgctcgcggaggaggtagc 107
Score = 67.9 bits (34), Expect = 9e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcat 895
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 54 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcat 1
>gb|CF323882.1|CF323882 HDN--05-A09.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-A09, mRNA sequence
Length = 554
Score = 428 bits (216), Expect = e-117
Identities = 369/415 (88%), Gaps = 5/415 (1%)
Strand = Plus / Minus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
||||||||||||||| || ||||| || | |||||| |||||||||||||| ||||| ||
Sbjct: 422 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 363
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggc-aatacgcacc- 118
||||||||| |||||||| ||||| |||||||||||||||||||| || ||| ||||||
Sbjct: 362 gccatcatctagacacattcgagggccatatgtattgaaaatgcgagccaatgcgcaccc 303
Query: 119 tca--acaccagc-accacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||| |||||| | ||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 302 tcannacaccaccnacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 243
Query: 176 tcatcataacagctcctaacaccaataggattaacgtgcccccagtatgactccttctgt 235
|| |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 242 tcgtcataacagctcctaacaccaataggattaacatgcccccagtaagtctccttctgt 183
Query: 236 ggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcacca 295
||||| ||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 182 ggatgttcaagtggatctccataaacttcacttgtgctagttagcaagaaccttgcacca 123
Query: 296 actcgctttgccagacccaacatattcaaagttcccatgacatttgtcttgatcgtcttg 355
| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 122 attcgctttgccagacccaacatattcaaggttcccatgacattggtcttgatcgtcttg 63
Query: 356 attgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggtagatcc 410
|| ||||| |||||||| || || || ||||||||||| |||||||| |||||||
Sbjct: 62 atggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgatagatcc 8
>dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F13, full
insert sequence
Length = 2387
Score = 424 bits (214), Expect = e-116
Identities = 313/346 (90%)
Strand = Plus / Minus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
||||||||||||||| || ||||| || | |||||| |||||||||||||| ||||| ||
Sbjct: 1727 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 1668
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggcaatacgcacctc 120
||||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 1667 gccatcatctagacacattcgagggccatatgtattgaaaatgcgagcaatgcgcacctc 1608
Query: 121 aacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatc 180
||||||| |||| | ||||||||||| ||| ||||||| |||||||| |||||||| ||
Sbjct: 1607 aacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccctcgtc 1548
Query: 181 ataacagctcctaacaccaataggattaacgtgcccccagtatgactccttctgtggatg 240
|||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct: 1547 ataacagctcctaacaccaataggattaacatgcccccagtaagtctccttctgtggatg 1488
Query: 241 ctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcg 300
||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 1487 ttcaagtggatctccataaacttcacttgtgctagttagcaagaaccttgcaccaattcg 1428
Query: 301 ctttgccagacccaacatattcaaagttcccatgacatttgtcttg 346
|||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 1427 ctttgccagacccaacatattcaaggttcccatgacattggtcttg 1382
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 598 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 539
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 538 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 479
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 478 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 419
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 418 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 359
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 358 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 314
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 282 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 223
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 222 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 163
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 162 gcgctgctcgcggaggaggtagc 140
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 87 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 28
Query: 902 agagcgg 908
|||||||
Sbjct: 27 agagcgg 21
>ref|NM_190499.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1173
Score = 418 bits (211), Expect = e-114
Identities = 307/339 (90%)
Strand = Plus / Minus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
||||||||||||||| || ||||| || | |||||| |||||||||||||| ||||| ||
Sbjct: 849 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 790
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggcaatacgcacctc 120
||||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 789 gccatcatctagacacattcgagggccatatgtattgaaaatgcgagcaatgcgcacctc 730
Query: 121 aacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatc 180
||||||| |||| | ||||||||||| ||| ||||||| |||||||| |||||||| ||
Sbjct: 729 aacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccctcgtc 670
Query: 181 ataacagctcctaacaccaataggattaacgtgcccccagtatgactccttctgtggatg 240
|||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct: 669 ataacagctcctaacaccaataggattaacatgcccccagtaagtctccttctgtggatg 610
Query: 241 ctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcg 300
||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 609 ttcaagtggatctccataaacttcacttgtgctagttagcaagaaccttgcaccaattcg 550
Query: 301 ctttgccagacccaacatattcaaagttcccatgacatt 339
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 549 ctttgccagacccaacatattcaaggttcccatgacatt 511
Score = 222 bits (112), Expect = 3e-055
Identities = 151/164 (92%)
Strand = Plus / Minus
Query: 466 ggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccac 525
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 444 ggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccaccac 385
Query: 526 gatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctgc 585
||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| ||
Sbjct: 384 gatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccggc 325
Query: 586 cccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 324 ccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 281
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 249 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 190
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 189 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 130
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 129 gcgctgctcgcggaggaggtagc 107
Score = 67.9 bits (34), Expect = 9e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcat 895
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 54 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcat 1
>dbj|AK062894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-E07, full
insert sequence
Length = 974
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 608 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 549
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 548 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 489
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 488 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 429
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 428 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 369
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 368 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 324
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 292 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 233
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 232 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 173
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 172 gcgctgctcgcggaggaggtagc 150
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 97 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 38
Query: 902 agagcgg 908
|||||||
Sbjct: 37 agagcgg 31
>gb|AACV01002640.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002640, whole
genome shotgun sequence
Length = 28300
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 9565 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 9506
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 9505 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 9446
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 9445 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 9386
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 9385 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 9326
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 9325 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 9281
Score = 212 bits (107), Expect = 3e-052
Identities = 140/151 (92%)
Strand = Plus / Minus
Query: 196 accaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcacc 255
||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| ||
Sbjct: 10499 accaataggattaacatgcccccagtaagtctccttctgtggatgttcaagtggatctcc 10440
Query: 256 ataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctttgccagacccaa 315
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct: 10439 ataaacttcacttgtgctagttagcaagaaccttgcaccaattcgctttgccagacccaa 10380
Query: 316 catattcaaagttcccatgacatttgtcttg 346
||||||||| |||||||||||||| ||||||
Sbjct: 10379 catattcaaggttcccatgacattggtcttg 10349
Score = 129 bits (65), Expect = 3e-027
Identities = 121/139 (87%), Gaps = 3/139 (2%)
Strand = Plus / Minus
Query: 653 aaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---ggtag 709
|||||||||||||||||| |||||||| |||||| ||||||||||| |||| |||||
Sbjct: 9244 aaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagaggtag 9185
Query: 710 ggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcaggcgc 769
|| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||||||
Sbjct: 9184 gggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggaggcgc 9125
Query: 770 tgctcgcggaggacgtagc 788
||||||||||||| |||||
Sbjct: 9124 tgctcgcggaggaggtagc 9106
Score = 109 bits (55), Expect = 3e-021
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 11233 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 11174
Query: 93 tattgaaaatgcgggcaatacgcacct 119
||||||||||||| ||||| |||||||
Sbjct: 11173 tattgaaaatgcgagcaatgcgcacct 11147
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
|||||||||||| |||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 10668 acctcaacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 10609
Query: 176 tcatcataacagctcctaacacc 198
|| ||||||||||||||||||||
Sbjct: 10608 tcgtcataacagctcctaacacc 10586
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 9053 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 8994
Query: 902 agagcgg 908
|||||||
Sbjct: 8993 agagcgg 8987
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 35971551 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 35971492
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 35971491 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 35971432
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 35971431 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 35971372
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 35971371 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 35971312
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 35971311 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 35971267
Score = 212 bits (107), Expect = 3e-052
Identities = 140/151 (92%)
Strand = Plus / Minus
Query: 196 accaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcacc 255
||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| ||
Sbjct: 35972485 accaataggattaacatgcccccagtaagtctccttctgtggatgttcaagtggatctcc 35972426
Query: 256 ataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctttgccagacccaa 315
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct: 35972425 ataaacttcacttgtgctagttagcaagaaccttgcaccaattcgctttgccagacccaa 35972366
Query: 316 catattcaaagttcccatgacatttgtcttg 346
||||||||| |||||||||||||| ||||||
Sbjct: 35972365 catattcaaggttcccatgacattggtcttg 35972335
Score = 141 bits (71), Expect = 8e-031
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 11890827 tgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgaggtggt 11890886
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | ||||| || ||||| || |||||||||| || |||||| |
Sbjct: 11890887 agatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcgaatc 11890946
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| ||||| |||||||||||| ||||| ||||| | || ||||||||||||||||| |
Sbjct: 11890947 gcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacga 11891006
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | || ||||| ||||||||||| ||||||||||| |
Sbjct: 11891007 cgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccgg 11891066
Query: 585 ccccgcctgtgacga 599
| ||||| |||||||
Sbjct: 11891067 cgccgcccgtgacga 11891081
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 35971235 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 35971176
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 35971175 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 35971116
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 35971115 gcgctgctcgcggaggaggtagc 35971093
Score = 109 bits (55), Expect = 3e-021
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 35973219 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 35973160
Query: 93 tattgaaaatgcgggcaatacgcacct 119
||||||||||||| ||||| |||||||
Sbjct: 35973159 tattgaaaatgcgagcaatgcgcacct 35973133
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
|||||||||||| |||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 35972654 acctcaacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 35972595
Query: 176 tcatcataacagctcctaacacc 198
|| ||||||||||||||||||||
Sbjct: 35972594 tcgtcataacagctcctaacacc 35972572
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 35971040 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 35970981
Query: 902 agagcgg 908
|||||||
Sbjct: 35970980 agagcgg 35970974
Score = 61.9 bits (31), Expect = 6e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||||||
Sbjct: 11888791 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11888850
Query: 93 tattgaaaatgcgggcaat 111
| || ||||| || |||||
Sbjct: 11888851 tgttaaaaatccgagcaat 11888869
Score = 60.0 bits (30), Expect = 2e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 475 gaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgct 534
|||||||||||||| ||||||||| | || ||||||| ||||||||| | ||| |||||
Sbjct: 43293430 gaggtggtgcgcgaagttctccttgcgccccgtgaagaggttgtcgacgatgatgacgct 43293489
Query: 535 gtcccc 540
||||||
Sbjct: 43293490 gtcccc 43293495
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 10418934 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 10418875
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 10418874 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 10418815
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 10418814 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 10418755
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 10418754 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 10418695
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 10418694 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 10418650
Score = 212 bits (107), Expect = 3e-052
Identities = 140/151 (92%)
Strand = Plus / Minus
Query: 196 accaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcacc 255
||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| ||
Sbjct: 10419868 accaataggattaacatgcccccagtaagtctccttctgtggatgttcaagtggatctcc 10419809
Query: 256 ataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctttgccagacccaa 315
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct: 10419808 ataaacttcacttgtgctagttagcaagaaccttgcaccaattcgctttgccagacccaa 10419749
Query: 316 catattcaaagttcccatgacatttgtcttg 346
||||||||| |||||||||||||| ||||||
Sbjct: 10419748 catattcaaggttcccatgacattggtcttg 10419718
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 10418618 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 10418559
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 10418558 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 10418499
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 10418498 gcgctgctcgcggaggaggtagc 10418476
Score = 109 bits (55), Expect = 3e-021
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 10420602 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 10420543
Query: 93 tattgaaaatgcgggcaatacgcacct 119
||||||||||||| ||||| |||||||
Sbjct: 10420542 tattgaaaatgcgagcaatgcgcacct 10420516
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
|||||||||||| |||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 10420037 acctcaacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 10419978
Query: 176 tcatcataacagctcctaacacc 198
|| ||||||||||||||||||||
Sbjct: 10419977 tcgtcataacagctcctaacacc 10419955
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 10418423 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 10418364
Query: 902 agagcgg 908
|||||||
Sbjct: 10418363 agagcgg 10418357
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0506B12
Length = 170759
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 155339 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 155280
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 155279 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 155220
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 155219 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 155160
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 155159 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 155100
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 155099 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 155055
Score = 212 bits (107), Expect = 3e-052
Identities = 140/151 (92%)
Strand = Plus / Minus
Query: 196 accaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcacc 255
||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| ||
Sbjct: 156273 accaataggattaacatgcccccagtaagtctccttctgtggatgttcaagtggatctcc 156214
Query: 256 ataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctttgccagacccaa 315
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct: 156213 ataaacttcacttgtgctagttagcaagaaccttgcaccaattcgctttgccagacccaa 156154
Query: 316 catattcaaagttcccatgacatttgtcttg 346
||||||||| |||||||||||||| ||||||
Sbjct: 156153 catattcaaggttcccatgacattggtcttg 156123
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 155023 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 154964
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 154963 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 154904
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 154903 gcgctgctcgcggaggaggtagc 154881
Score = 109 bits (55), Expect = 3e-021
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 157007 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 156948
Query: 93 tattgaaaatgcgggcaatacgcacct 119
||||||||||||| ||||| |||||||
Sbjct: 156947 tattgaaaatgcgagcaatgcgcacct 156921
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
|||||||||||| |||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 156442 acctcaacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 156383
Query: 176 tcatcataacagctcctaacacc 198
|| ||||||||||||||||||||
Sbjct: 156382 tcgtcataacagctcctaacacc 156360
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 154828 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 154769
Query: 902 agagcgg 908
|||||||
Sbjct: 154768 agagcgg 154762
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 10157857 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 10157798
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 10157797 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 10157738
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 10157737 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 10157678
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 10157677 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 10157618
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 10157617 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 10157573
Score = 212 bits (107), Expect = 3e-052
Identities = 140/151 (92%)
Strand = Plus / Minus
Query: 196 accaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcacc 255
||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| ||
Sbjct: 10158791 accaataggattaacatgcccccagtaagtctccttctgtggatgttcaagtggatctcc 10158732
Query: 256 ataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctttgccagacccaa 315
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct: 10158731 ataaacttcacttgtgctagttagcaagaaccttgcaccaattcgctttgccagacccaa 10158672
Query: 316 catattcaaagttcccatgacatttgtcttg 346
||||||||| |||||||||||||| ||||||
Sbjct: 10158671 catattcaaggttcccatgacattggtcttg 10158641
Score = 129 bits (65), Expect = 3e-027
Identities = 121/139 (87%), Gaps = 3/139 (2%)
Strand = Plus / Minus
Query: 653 aaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---ggtag 709
|||||||||||||||||| |||||||| |||||| ||||||||||| |||| |||||
Sbjct: 10157536 aaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagaggtag 10157477
Query: 710 ggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcaggcgc 769
|| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||||||
Sbjct: 10157476 gggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggaggcgc 10157417
Query: 770 tgctcgcggaggacgtagc 788
||||||||||||| |||||
Sbjct: 10157416 tgctcgcggaggaggtagc 10157398
Score = 109 bits (55), Expect = 3e-021
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 10159525 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 10159466
Query: 93 tattgaaaatgcgggcaatacgcacct 119
||||||||||||| ||||| |||||||
Sbjct: 10159465 tattgaaaatgcgagcaatgcgcacct 10159439
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
|||||||||||| |||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 10158960 acctcaacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 10158901
Query: 176 tcatcataacagctcctaacacc 198
|| ||||||||||||||||||||
Sbjct: 10158900 tcgtcataacagctcctaacacc 10158878
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 10157345 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 10157286
Query: 902 agagcgg 908
|||||||
Sbjct: 10157285 agagcgg 10157279
Score = 60.0 bits (30), Expect = 2e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 475 gaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgct 534
|||||||||||||| ||||||||| | || ||||||| ||||||||| | ||| |||||
Sbjct: 17355180 gaggtggtgcgcgaagttctccttgcgccccgtgaagaggttgtcgacgatgatgacgct 17355239
Query: 535 gtcccc 540
||||||
Sbjct: 17355240 gtcccc 17355245
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 35359578 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 35359519
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 35359518 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 35359459
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 35359458 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 35359399
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 35359398 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 35359339
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 35359338 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 35359294
Score = 212 bits (107), Expect = 3e-052
Identities = 140/151 (92%)
Strand = Plus / Minus
Query: 196 accaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcacc 255
||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| ||
Sbjct: 35360512 accaataggattaacatgcccccagtaagtctccttctgtggatgttcaagtggatctcc 35360453
Query: 256 ataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctttgccagacccaa 315
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct: 35360452 ataaacttcacttgtgctagttagcaagaaccttgcaccaattcgctttgccagacccaa 35360393
Query: 316 catattcaaagttcccatgacatttgtcttg 346
||||||||| |||||||||||||| ||||||
Sbjct: 35360392 catattcaaggttcccatgacattggtcttg 35360362
Score = 141 bits (71), Expect = 8e-031
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 11927347 tgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgaggtggt 11927406
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | ||||| || ||||| || |||||||||| || |||||| |
Sbjct: 11927407 agatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcgaatc 11927466
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| ||||| |||||||||||| ||||| ||||| | || ||||||||||||||||| |
Sbjct: 11927467 gcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacga 11927526
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | || ||||| ||||||||||| ||||||||||| |
Sbjct: 11927527 cgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccgg 11927586
Query: 585 ccccgcctgtgacga 599
| ||||| |||||||
Sbjct: 11927587 cgccgcccgtgacga 11927601
Score = 129 bits (65), Expect = 3e-027
Identities = 121/139 (87%), Gaps = 3/139 (2%)
Strand = Plus / Minus
Query: 653 aaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---ggtag 709
|||||||||||||||||| |||||||| |||||| ||||||||||| |||| |||||
Sbjct: 35359257 aaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagaggtag 35359198
Query: 710 ggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcaggcgc 769
|| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||||||
Sbjct: 35359197 gggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggaggcgc 35359138
Query: 770 tgctcgcggaggacgtagc 788
||||||||||||| |||||
Sbjct: 35359137 tgctcgcggaggaggtagc 35359119
Score = 109 bits (55), Expect = 3e-021
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 35361246 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 35361187
Query: 93 tattgaaaatgcgggcaatacgcacct 119
||||||||||||| ||||| |||||||
Sbjct: 35361186 tattgaaaatgcgagcaatgcgcacct 35361160
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
|||||||||||| |||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 35360681 acctcaacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 35360622
Query: 176 tcatcataacagctcctaacacc 198
|| ||||||||||||||||||||
Sbjct: 35360621 tcgtcataacagctcctaacacc 35360599
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 35359066 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 35359007
Query: 902 agagcgg 908
|||||||
Sbjct: 35359006 agagcgg 35359000
Score = 61.9 bits (31), Expect = 6e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||||||
Sbjct: 11925311 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11925370
Query: 93 tattgaaaatgcgggcaat 111
| || ||||| || |||||
Sbjct: 11925371 tgttaaaaatccgagcaat 11925389
Score = 60.0 bits (30), Expect = 2e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 475 gaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgct 534
|||||||||||||| ||||||||| | || ||||||| ||||||||| | ||| |||||
Sbjct: 42556901 gaggtggtgcgcgaagttctccttgcgccccgtgaagaggttgtcgacgatgatgacgct 42556960
Query: 535 gtcccc 540
||||||
Sbjct: 42556961 gtcccc 42556966
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 319 bits (161), Expect = 2e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
||||||||||||| ||||| |||||||| || || || ||||||||||| |||||||| |
Sbjct: 35890881 tgatcgtcttgatggggttgtacttgtagtgcacaggggacgcggggcacgcgaggtgat 35890822
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
|||||||||| || | | ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 35890821 agatccggtccacctcgagcaggatgggctcgacgacatcgtggcggagcagctcgaacc 35890762
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 35890761 tggggttccggaggtggtgcgcgacgttgtccttcctcccggtgaagaagttgtccacca 35890702
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| |
Sbjct: 35890701 cgatcacgctgtccccttgctccagcagcctgtcgacgaggtggctgccaacgaacccgg 35890642
Query: 585 ccccgcctgtgacgacgacgcggcgctgcggcgggcggaagccgg 629
|||| || |||||||||||||||||| ||||||||||||| ||||
Sbjct: 35890641 cccctccggtgacgacgacgcggcgcggcggcgggcggaacccgg 35890597
Score = 212 bits (107), Expect = 3e-052
Identities = 140/151 (92%)
Strand = Plus / Minus
Query: 196 accaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcacc 255
||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||| ||
Sbjct: 35891815 accaataggattaacatgcccccagtaagtctccttctgtggatgttcaagtggatctcc 35891756
Query: 256 ataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctttgccagacccaa 315
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct: 35891755 ataaacttcacttgtgctagttagcaagaaccttgcaccaattcgctttgccagacccaa 35891696
Query: 316 catattcaaagttcccatgacatttgtcttg 346
||||||||| |||||||||||||| ||||||
Sbjct: 35891695 catattcaaggttcccatgacattggtcttg 35891665
Score = 141 bits (71), Expect = 8e-031
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 11893045 tgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgaggtggt 11893104
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | ||||| || ||||| || |||||||||| || |||||| |
Sbjct: 11893105 agatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcgaatc 11893164
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| ||||| |||||||||||| ||||| ||||| | || ||||||||||||||||| |
Sbjct: 11893165 gcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacga 11893224
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | || ||||| ||||||||||| ||||||||||| |
Sbjct: 11893225 cgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccgg 11893284
Query: 585 ccccgcctgtgacga 599
| ||||| |||||||
Sbjct: 11893285 cgccgcccgtgacga 11893299
Score = 137 bits (69), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 649 ggcgaaggagaagagcgggcgggcgtcggggaggtgggaagacggggagagcgaga---g 705
|||||||||||||||||||||| |||||||| |||||| ||||||||||| |||| |
Sbjct: 35890565 ggcgaaggagaagagcgggcggcggtcggggacgtgggaggacggggagagggagaagag 35890506
Query: 706 gtagggccggaggaggaagaaggtggaggcgatgagcgcaccgagcaggacgcacagcag 765
|||||| |||||||||||||||| ||||||||| || || ||||| |||||| | || ||
Sbjct: 35890505 gtaggggcggaggaggaagaaggaggaggcgatcagggcgccgaggaggacgaagaggag 35890446
Query: 766 gcgctgctcgcggaggacgtagc 788
||||||||||||||||| |||||
Sbjct: 35890445 gcgctgctcgcggaggaggtagc 35890423
Score = 109 bits (55), Expect = 3e-021
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 35892549 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 35892490
Query: 93 tattgaaaatgcgggcaatacgcacct 119
||||||||||||| ||||| |||||||
Sbjct: 35892489 tattgaaaatgcgagcaatgcgcacct 35892463
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
|||||||||||| |||| | ||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 35891984 acctcaacaccaccacctctgtgatagtccatggttaaagtctctgctgttcttttcccc 35891925
Query: 176 tcatcataacagctcctaacacc 198
|| ||||||||||||||||||||
Sbjct: 35891924 tcgtcataacagctcctaacacc 35891902
Score = 93.7 bits (47), Expect = 2e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 842 ggcgtgcgccggcgatggcgcgtgggtaggggaagacttgtggagctgcttcatggcggg 901
||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 35890370 ggcgtgcgccgccgccggcgcgtgggtgggggacgacttgtggagctgcttcatggcggg 35890311
Query: 902 agagcgg 908
|||||||
Sbjct: 35890310 agagcgg 35890304
Score = 61.9 bits (31), Expect = 6e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||||||
Sbjct: 11891009 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11891068
Query: 93 tattgaaaatgcgggcaat 111
| || ||||| || |||||
Sbjct: 11891069 tgttaaaaatccgagcaat 11891087
Score = 60.0 bits (30), Expect = 2e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 475 gaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgct 534
|||||||||||||| ||||||||| | || ||||||| ||||||||| | ||| |||||
Sbjct: 43212760 gaggtggtgcgcgaagttctccttgcgccccgtgaagaggttgtcgacgatgatgacgct 43212819
Query: 535 gtcccc 540
||||||
Sbjct: 43212820 gtcccc 43212825
>dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I12, full
insert sequence
Length = 1604
Score = 291 bits (147), Expect = 3e-076
Identities = 492/607 (81%)
Strand = Plus / Minus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
|||||||||||||||||| ||| | || | || ||| || || || ||||| || || ||
Sbjct: 1011 accataaactgtcattggctgtttccgcaatgtctgagcgacgaagttgctaacaacacg 952
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggcaatacgcacctc 120
|||||||| | |||||||||||| |||||||| ||||| || || ||||| | ||||||
Sbjct: 951 cccatcatctaaacacatacgagggccatatgtgttgaatattcgcgcaattctcacctc 892
Query: 121 aacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatc 180
|||||| ||||| ||||| || ||||| || |||||| ||||||||||| ||||| ||
Sbjct: 891 aacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtc 832
Query: 181 ataacagctcctaacaccaataggattaacgtgcccccagtatgactccttctgtggatg 240
||||| |||||||| || || ||||| || || |||||||| |||||||||||||||
Sbjct: 831 gtaacaactcctaacgcctatgggatttacatggccccagtagctctccttctgtggatg 772
Query: 241 ctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcg 300
||||| |||||||| || || ||||| || || ||||| || |||| || || || |
Sbjct: 771 ttcaagaggatcaccgtacacctcactggtactggtcaataagaaccgggctcccaccct 712
Query: 301 ctttgccagacccaacatattcaaagttcccatgacatttgtcttgatcgtcttgattgg 360
|||||||| |||| ||| ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct: 711 ctttgccaatcccagcatgttcaaggtccccatcacatttgtcttgatggtcttgatggg 652
Query: 361 gttatacttgtaatgaacgggcgacgcggggcatgcgaggtggtagatccggtcgacata 420
||| | ||||| || ||||| || || ||||| ||||||||||||||| ||||||| |
Sbjct: 651 gttgaatttgtagtggacgggggatgccgggcaggcgaggtggtagatctggtcgacctc 592
Query: 421 aaagaggattggttcgactacatcgtggcggagcagctcgaaccgggggttccggaggtg 480
| |||||| || ||||| || |||||||||| ||||||||||| |||| ||||||
Sbjct: 591 gaggaggatgggctcgacgacgtcgtggcggatgagctcgaaccgcgggtcggcgaggtg 532
Query: 481 gtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgctgtcccc 540
| |||||||||||||||| | || ||||||||||||||||| ||||| |||||||||||
Sbjct: 531 gcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacgacgatgacgctgtcccc 472
Query: 541 ctgctctaggagccggtcgacgaggtggctgccgacgaaccctgccccgcctgtgacgac 600
| | || ||| |||||||||||||||||||||||| || || || || ||||||||
Sbjct: 471 gcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccgctccccccgtgacgac 412
Query: 601 gacgcgg 607
|||||||
Sbjct: 411 gacgcgg 405
>dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-1 mRNA for
UDP-glucuronic acid decarboxylase, complete cds
Length = 1303
Score = 291 bits (147), Expect = 3e-076
Identities = 492/607 (81%)
Strand = Plus / Minus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
|||||||||||||||||| ||| | || | || ||| || || || ||||| || || ||
Sbjct: 916 accataaactgtcattggctgtttccgcaatgtctgagcgacgaagttgctaacaacacg 857
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggcaatacgcacctc 120
|||||||| | |||||||||||| |||||||| ||||| || || ||||| | ||||||
Sbjct: 856 cccatcatctaaacacatacgagggccatatgtgttgaatattcgcgcaattctcacctc 797
Query: 121 aacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatc 180
|||||| ||||| ||||| || ||||| || |||||| ||||||||||| ||||| ||
Sbjct: 796 aacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtc 737
Query: 181 ataacagctcctaacaccaataggattaacgtgcccccagtatgactccttctgtggatg 240
||||| |||||||| || || ||||| || || |||||||| |||||||||||||||
Sbjct: 736 gtaacaactcctaacgcctatgggatttacatggccccagtagctctccttctgtggatg 677
Query: 241 ctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcg 300
||||| |||||||| || || ||||| || || ||||| || |||| || || || |
Sbjct: 676 ttcaagaggatcaccgtacacctcactggtactggtcaataagaaccgggctcccaccct 617
Query: 301 ctttgccagacccaacatattcaaagttcccatgacatttgtcttgatcgtcttgattgg 360
|||||||| |||| ||| ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct: 616 ctttgccaatcccagcatgttcaaggtccccatcacatttgtcttgatggtcttgatggg 557
Query: 361 gttatacttgtaatgaacgggcgacgcggggcatgcgaggtggtagatccggtcgacata 420
||| | ||||| || ||||| || || ||||| ||||||||||||||| ||||||| |
Sbjct: 556 gttgaatttgtagtggacgggggatgccgggcaggcgaggtggtagatctggtcgacctc 497
Query: 421 aaagaggattggttcgactacatcgtggcggagcagctcgaaccgggggttccggaggtg 480
| |||||| || ||||| || |||||||||| ||||||||||| |||| ||||||
Sbjct: 496 gaggaggatgggctcgacgacgtcgtggcggatgagctcgaaccgcgggtcggcgaggtg 437
Query: 481 gtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgctgtcccc 540
| |||||||||||||||| | || ||||||||||||||||| ||||| |||||||||||
Sbjct: 436 gcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacgacgatgacgctgtcccc 377
Query: 541 ctgctctaggagccggtcgacgaggtggctgccgacgaaccctgccccgcctgtgacgac 600
| | || ||| |||||||||||||||||||||||| || || || || ||||||||
Sbjct: 376 gcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccgctccccccgtgacgac 317
Query: 601 gacgcgg 607
|||||||
Sbjct: 316 gacgcgg 310
>dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H12, full
insert sequence
Length = 805
Score = 157 bits (79), Expect = 1e-035
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
||||||||||||||| || ||||| || | |||||| |||||||||||||| ||||| ||
Sbjct: 150 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 91
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggcaatacgcacctc 120
||||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 90 gccatcatctagacacattcgagggccatatgtattgaaaatgcgagcaatgcgcacctc 31
Query: 121 aacaccagcaccacgatgatagtccat 147
||||||| |||| | |||||||||||
Sbjct: 30 aacaccaccacctctgtgatagtccat 4
>gb|CB656571.1|CB656571 OSJNEc11B09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11B09 3', mRNA sequence
Length = 779
Score = 151 bits (76), Expect = 8e-034
Identities = 118/132 (89%)
Strand = Plus / Plus
Query: 1 accataaactgtcattggttgtcttcgtagtgcctgtgcaacaaaattgctgaccacgcg 60
||||||||||||||| || ||||| || | |||||| |||||||||||||| ||||| ||
Sbjct: 646 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 705
Query: 61 gccatcatcgagacacatacgaggaccatatgtattgaaaatgcgggcaatacgcacctc 120
||||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 706 gccatcatctagacacattcgagggccatatgtattgaaaatgcgagcaatgcgcacctc 765
Query: 121 aacaccagcacc 132
||||||| ||||
Sbjct: 766 aacaccaccacc 777
>gb|CB653220.1|CB653220 OSJNEc04A21.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04A21 5', mRNA sequence
Length = 762
Score = 149 bits (75), Expect = 3e-033
Identities = 213/259 (82%)
Strand = Plus / Minus
Query: 341 gtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgagg 400
|||||||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||
Sbjct: 338 gtcttgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgagg 279
Query: 401 tggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcg 460
||||||||| ||||||| | | ||||| || ||||| || |||||||||| || ||||
Sbjct: 278 tggtagatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcg 219
Query: 461 aaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcg 520
|| || ||||| |||||||||||| ||||| ||||| | || |||||||||||||||
Sbjct: 218 aatcgcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcg 159
Query: 521 accacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaac 580
|| |||||||||||||| || |||| | || ||||| ||||||||||| |||||||||
Sbjct: 158 acgacgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaac 99
Query: 581 cctgccccgcctgtgacga 599
|| || ||||| |||||||
Sbjct: 98 ccggcgccgcccgtgacga 80
Score = 81.8 bits (41), Expect = 6e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 29 agtgcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggacca 88
|||||||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||
Sbjct: 650 agtgcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggacca 591
Query: 89 tatgtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccata 148
||||| || ||||| || ||||| | |||||||| |||||||| || || |||||
Sbjct: 590 tatgtgttaaaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatg 531
Query: 149 gttgaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|| | || || ||||| | ||| ||||||||||| ||||| |||||||||||
Sbjct: 530 gtcaacgtttcagctgtgcgcttgccctcatcatagcagcttctaacaccaat 478
>gb|CB662804.1|CB662804 OSJNEd07C16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07C16 5', mRNA sequence
Length = 794
Score = 149 bits (75), Expect = 3e-033
Identities = 213/259 (82%)
Strand = Plus / Minus
Query: 341 gtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgagg 400
|||||||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||
Sbjct: 733 gtcttgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgagg 674
Query: 401 tggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcg 460
||||||||| ||||||| | | ||||| || ||||| || |||||||||| || ||||
Sbjct: 673 tggtagatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcg 614
Query: 461 aaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcg 520
|| || ||||| |||||||||||| ||||| ||||| | || |||||||||||||||
Sbjct: 613 aatcgcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcg 554
Query: 521 accacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaac 580
|| |||||||||||||| || |||| | || ||||| ||||||||||| |||||||||
Sbjct: 553 acgacgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaac 494
Query: 581 cctgccccgcctgtgacga 599
|| || ||||| |||||||
Sbjct: 493 ccggcgccgcccgtgacga 475
>gb|CB663751.1|CB663751 OSJNEd09B06.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09B06 5', mRNA sequence
Length = 722
Score = 149 bits (75), Expect = 3e-033
Identities = 213/259 (82%)
Strand = Plus / Minus
Query: 341 gtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgagg 400
|||||||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||
Sbjct: 532 gtcttgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgagg 473
Query: 401 tggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcg 460
||||||||| ||||||| | | ||||| || ||||| || |||||||||| || ||||
Sbjct: 472 tggtagatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcg 413
Query: 461 aaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcg 520
|| || ||||| |||||||||||| ||||| ||||| | || |||||||||||||||
Sbjct: 412 aatcgcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcg 353
Query: 521 accacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaac 580
|| |||||||||||||| || |||| | || ||||| ||||||||||| |||||||||
Sbjct: 352 acgacgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaac 293
Query: 581 cctgccccgcctgtgacga 599
|| || ||||| |||||||
Sbjct: 292 ccggcgccgcccgtgacga 274
>gb|CB674715.1|CB674715 OSJNEe09O17.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09O17 5', mRNA sequence
Length = 797
Score = 149 bits (75), Expect = 3e-033
Identities = 213/259 (82%)
Strand = Plus / Minus
Query: 341 gtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgagg 400
|||||||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||
Sbjct: 701 gtcttgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgagg 642
Query: 401 tggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcg 460
||||||||| ||||||| | | ||||| || ||||| || |||||||||| || ||||
Sbjct: 641 tggtagatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcg 582
Query: 461 aaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcg 520
|| || ||||| |||||||||||| ||||| ||||| | || |||||||||||||||
Sbjct: 581 aatcgcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcg 522
Query: 521 accacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaac 580
|| |||||||||||||| || |||| | || ||||| ||||||||||| |||||||||
Sbjct: 521 acgacgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaac 462
Query: 581 cctgccccgcctgtgacga 599
|| || ||||| |||||||
Sbjct: 461 ccggcgccgcccgtgacga 443
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full
insert sequence
Length = 1820
Score = 149 bits (75), Expect = 3e-033
Identities = 213/259 (82%)
Strand = Plus / Minus
Query: 341 gtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgagg 400
|||||||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||
Sbjct: 755 gtcttgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgagg 696
Query: 401 tggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcg 460
||||||||| ||||||| | | ||||| || ||||| || |||||||||| || ||||
Sbjct: 695 tggtagatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcg 636
Query: 461 aaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcg 520
|| || ||||| |||||||||||| ||||| ||||| | || |||||||||||||||
Sbjct: 635 aatcgcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcg 576
Query: 521 accacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaac 580
|| |||||||||||||| || |||| | || ||||| ||||||||||| |||||||||
Sbjct: 575 acgacgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaac 516
Query: 581 cctgccccgcctgtgacga 599
|| || ||||| |||||||
Sbjct: 515 ccggcgccgcccgtgacga 497
Score = 81.8 bits (41), Expect = 6e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 29 agtgcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggacca 88
|||||||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||
Sbjct: 1067 agtgcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggacca 1008
Query: 89 tatgtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccata 148
||||| || ||||| || ||||| | |||||||| |||||||| || || |||||
Sbjct: 1007 tatgtgttaaaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatg 948
Query: 149 gttgaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|| | || || ||||| | ||| ||||||||||| ||||| |||||||||||
Sbjct: 947 gtcaacgtttcagctgtgcgcttgccctcatcatagcagcttctaacaccaat 895
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0009C19, from chromosome 3, complete sequence
Length = 131709
Score = 149 bits (75), Expect = 3e-033
Identities = 216/263 (82%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| | ||||| || ||||| || || ||||| ||||||||||
Sbjct: 37813 tgatggtcttgatggggttgaatttgtagtggacgggggatgccgggcaggcgaggtggt 37754
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| ||||||||||
Sbjct: 37753 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatgagctcgaacc 37694
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| |||| ||||||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 37693 gcgggtcggcgaggtggcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacga 37634
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||| ||||||||||| | | || ||| |||||||||||||||||||||||| || |
Sbjct: 37633 cgatgacgctgtccccgcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccg 37574
Query: 585 ccccgcctgtgacgacgacgcgg 607
| || || |||||||||||||||
Sbjct: 37573 ctccccccgtgacgacgacgcgg 37551
Score = 58.0 bits (29), Expect = 9e-006
Identities = 98/121 (80%)
Strand = Plus / Minus
Query: 226 ctccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaa 285
||||||||||||||| ||||| |||||||| || || ||||| || || ||||| || ||
Sbjct: 38170 ctccttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaa 38111
Query: 286 ccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtctt 345
|| || || || | |||||||| |||| ||| ||||| || ||||| |||||||||||
Sbjct: 38110 ccgggctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtctt 38051
Query: 346 g 346
|
Sbjct: 38050 g 38050
Score = 56.0 bits (28), Expect = 4e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||||||||||| ||||| ||||| || ||||| || |||||| ||||||||||| |||
Sbjct: 38408 acctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccc 38349
Query: 176 tcatcataacagctcctaac 195
|| || ||||| ||||||||
Sbjct: 38348 tcgtcgtaacaactcctaac 38329
Score = 44.1 bits (22), Expect = 0.14
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 62 ccatcatcgagacacatacgaggaccatatgtattgaa 99
|||||||| | |||||||||||| |||||||| |||||
Sbjct: 39044 ccatcatctaaacacatacgagggccatatgtgttgaa 39007
>gb|AACV01006352.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006352, whole
genome shotgun sequence
Length = 30443
Score = 149 bits (75), Expect = 3e-033
Identities = 216/263 (82%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| | ||||| || ||||| || || ||||| ||||||||||
Sbjct: 5282 tgatggtcttgatggggttgaatttgtagtggacgggggatgccgggcaggcgaggtggt 5341
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| ||||||||||
Sbjct: 5342 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatgagctcgaacc 5401
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| |||| ||||||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 5402 gcgggtcggcgaggtggcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacga 5461
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||| ||||||||||| | | || ||| |||||||||||||||||||||||| || |
Sbjct: 5462 cgatgacgctgtccccgcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccg 5521
Query: 585 ccccgcctgtgacgacgacgcgg 607
| || || |||||||||||||||
Sbjct: 5522 ctccccccgtgacgacgacgcgg 5544
Score = 58.0 bits (29), Expect = 9e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 226 ctccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaa 285
||||||||||||||| ||||| |||||||| || || ||||| || || ||||| || ||
Sbjct: 4925 ctccttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaa 4984
Query: 286 ccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtctt 345
|| || || || | |||||||| |||| ||| ||||| || ||||| |||||||||||
Sbjct: 4985 ccgggctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtctt 5044
Query: 346 g 346
|
Sbjct: 5045 g 5045
Score = 56.0 bits (28), Expect = 4e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||||||||||| ||||| ||||| || ||||| || |||||| ||||||||||| |||
Sbjct: 4687 acctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccc 4746
Query: 176 tcatcataacagctcctaac 195
|| || ||||| ||||||||
Sbjct: 4747 tcgtcgtaacaactcctaac 4766
Score = 44.1 bits (22), Expect = 0.14
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 ccatcatcgagacacatacgaggaccatatgtattgaa 99
|||||||| | |||||||||||| |||||||| |||||
Sbjct: 4051 ccatcatctaaacacatacgagggccatatgtgttgaa 4088
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for
UDP-glucuronic acid decarboxylase, complete cds
Length = 1336
Score = 149 bits (75), Expect = 3e-033
Identities = 213/259 (82%)
Strand = Plus / Minus
Query: 341 gtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgagg 400
|||||||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||
Sbjct: 628 gtcttgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgagg 569
Query: 401 tggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcg 460
||||||||| ||||||| | | ||||| || ||||| || |||||||||| || ||||
Sbjct: 568 tggtagatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcg 509
Query: 461 aaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcg 520
|| || ||||| |||||||||||| ||||| ||||| | || |||||||||||||||
Sbjct: 508 aatcgcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcg 449
Query: 521 accacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaac 580
|| |||||||||||||| || |||| | || ||||| ||||||||||| |||||||||
Sbjct: 448 acgacgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaac 389
Query: 581 cctgccccgcctgtgacga 599
|| || ||||| |||||||
Sbjct: 388 ccggcgccgcccgtgacga 370
Score = 81.8 bits (41), Expect = 6e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 29 agtgcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggacca 88
|||||||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||
Sbjct: 940 agtgcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggacca 881
Query: 89 tatgtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccata 148
||||| || ||||| || ||||| | |||||||| |||||||| || || |||||
Sbjct: 880 tatgtgttaaaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatg 821
Query: 149 gttgaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|| | || || ||||| | ||| ||||||||||| ||||| |||||||||||
Sbjct: 820 gtcaacgtttcagctgtgcgcttgccctcatcatagcagcttctaacaccaat 768
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 149 bits (75), Expect = 3e-033
Identities = 216/263 (82%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| | ||||| || ||||| || || ||||| ||||||||||
Sbjct: 918810 tgatggtcttgatggggttgaatttgtagtggacgggggatgccgggcaggcgaggtggt 918869
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| ||||||||||
Sbjct: 918870 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatgagctcgaacc 918929
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| |||| ||||||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 918930 gcgggtcggcgaggtggcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacga 918989
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||| ||||||||||| | | || ||| |||||||||||||||||||||||| || |
Sbjct: 918990 cgatgacgctgtccccgcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccg 919049
Query: 585 ccccgcctgtgacgacgacgcgg 607
| || || |||||||||||||||
Sbjct: 919050 ctccccccgtgacgacgacgcgg 919072
Score = 58.0 bits (29), Expect = 9e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 226 ctccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaa 285
||||||||||||||| ||||| |||||||| || || ||||| || || ||||| || ||
Sbjct: 918453 ctccttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaa 918512
Query: 286 ccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtctt 345
|| || || || | |||||||| |||| ||| ||||| || ||||| |||||||||||
Sbjct: 918513 ccgggctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtctt 918572
Query: 346 g 346
|
Sbjct: 918573 g 918573
Score = 56.0 bits (28), Expect = 4e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||||||||||| ||||| ||||| || ||||| || |||||| ||||||||||| |||
Sbjct: 918215 acctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccc 918274
Query: 176 tcatcataacagctcctaac 195
|| || ||||| ||||||||
Sbjct: 918275 tcgtcgtaacaactcctaac 918294
Score = 44.1 bits (22), Expect = 0.14
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 ccatcatcgagacacatacgaggaccatatgtattgaa 99
|||||||| | |||||||||||| |||||||| |||||
Sbjct: 917579 ccatcatctaaacacatacgagggccatatgtgttgaa 917616
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 149 bits (75), Expect = 3e-033
Identities = 216/263 (82%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| | ||||| || ||||| || || ||||| ||||||||||
Sbjct: 9572096 tgatggtcttgatggggttgaatttgtagtggacgggggatgccgggcaggcgaggtggt 9572155
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| ||||||||||
Sbjct: 9572156 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatgagctcgaacc 9572215
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| |||| ||||||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 9572216 gcgggtcggcgaggtggcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacga 9572275
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||| ||||||||||| | | || ||| |||||||||||||||||||||||| || |
Sbjct: 9572276 cgatgacgctgtccccgcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccg 9572335
Query: 585 ccccgcctgtgacgacgacgcgg 607
| || || |||||||||||||||
Sbjct: 9572336 ctccccccgtgacgacgacgcgg 9572358
Score = 58.0 bits (29), Expect = 9e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 226 ctccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaa 285
||||||||||||||| ||||| |||||||| || || ||||| || || ||||| || ||
Sbjct: 9571739 ctccttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaa 9571798
Query: 286 ccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtctt 345
|| || || || | |||||||| |||| ||| ||||| || ||||| |||||||||||
Sbjct: 9571799 ccgggctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtctt 9571858
Query: 346 g 346
|
Sbjct: 9571859 g 9571859
Score = 56.0 bits (28), Expect = 4e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||||||||||| ||||| ||||| || ||||| || |||||| ||||||||||| |||
Sbjct: 9571501 acctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccc 9571560
Query: 176 tcatcataacagctcctaac 195
|| || ||||| ||||||||
Sbjct: 9571561 tcgtcgtaacaactcctaac 9571580
Score = 44.1 bits (22), Expect = 0.14
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 ccatcatcgagacacatacgaggaccatatgtattgaa 99
|||||||| | |||||||||||| |||||||| |||||
Sbjct: 9570865 ccatcatctaaacacatacgagggccatatgtgttgaa 9570902
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 149 bits (75), Expect = 3e-033
Identities = 216/263 (82%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| | ||||| || ||||| || || ||||| ||||||||||
Sbjct: 9764458 tgatggtcttgatggggttgaatttgtagtggacgggggatgccgggcaggcgaggtggt 9764517
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| ||||||||||
Sbjct: 9764518 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatgagctcgaacc 9764577
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| |||| ||||||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 9764578 gcgggtcggcgaggtggcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacga 9764637
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||| ||||||||||| | | || ||| |||||||||||||||||||||||| || |
Sbjct: 9764638 cgatgacgctgtccccgcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccg 9764697
Query: 585 ccccgcctgtgacgacgacgcgg 607
| || || |||||||||||||||
Sbjct: 9764698 ctccccccgtgacgacgacgcgg 9764720
Score = 58.0 bits (29), Expect = 9e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 226 ctccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaa 285
||||||||||||||| ||||| |||||||| || || ||||| || || ||||| || ||
Sbjct: 9764101 ctccttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaa 9764160
Query: 286 ccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtctt 345
|| || || || | |||||||| |||| ||| ||||| || ||||| |||||||||||
Sbjct: 9764161 ccgggctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtctt 9764220
Query: 346 g 346
|
Sbjct: 9764221 g 9764221
Score = 56.0 bits (28), Expect = 4e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||||||||||| ||||| ||||| || ||||| || |||||| ||||||||||| |||
Sbjct: 9763863 acctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccc 9763922
Query: 176 tcatcataacagctcctaac 195
|| || ||||| ||||||||
Sbjct: 9763923 tcgtcgtaacaactcctaac 9763942
Score = 44.1 bits (22), Expect = 0.14
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 ccatcatcgagacacatacgaggaccatatgtattgaa 99
|||||||| | |||||||||||| |||||||| |||||
Sbjct: 9763227 ccatcatctaaacacatacgagggccatatgtgttgaa 9763264
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 149 bits (75), Expect = 3e-033
Identities = 216/263 (82%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| | ||||| || ||||| || || ||||| ||||||||||
Sbjct: 9572994 tgatggtcttgatggggttgaatttgtagtggacgggggatgccgggcaggcgaggtggt 9573053
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| ||||||||||
Sbjct: 9573054 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatgagctcgaacc 9573113
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| |||| ||||||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 9573114 gcgggtcggcgaggtggcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacga 9573173
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||| ||||||||||| | | || ||| |||||||||||||||||||||||| || |
Sbjct: 9573174 cgatgacgctgtccccgcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccg 9573233
Query: 585 ccccgcctgtgacgacgacgcgg 607
| || || |||||||||||||||
Sbjct: 9573234 ctccccccgtgacgacgacgcgg 9573256
Score = 58.0 bits (29), Expect = 9e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 226 ctccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaa 285
||||||||||||||| ||||| |||||||| || || ||||| || || ||||| || ||
Sbjct: 9572637 ctccttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaa 9572696
Query: 286 ccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtctt 345
|| || || || | |||||||| |||| ||| ||||| || ||||| |||||||||||
Sbjct: 9572697 ccgggctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtctt 9572756
Query: 346 g 346
|
Sbjct: 9572757 g 9572757
Score = 56.0 bits (28), Expect = 4e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||||||||||| ||||| ||||| || ||||| || |||||| ||||||||||| |||
Sbjct: 9572399 acctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccc 9572458
Query: 176 tcatcataacagctcctaac 195
|| || ||||| ||||||||
Sbjct: 9572459 tcgtcgtaacaactcctaac 9572478
Score = 44.1 bits (22), Expect = 0.14
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 ccatcatcgagacacatacgaggaccatatgtattgaa 99
|||||||| | |||||||||||| |||||||| |||||
Sbjct: 9571763 ccatcatctaaacacatacgagggccatatgtgttgaa 9571800
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 149 bits (75), Expect = 3e-033
Identities = 216/263 (82%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| | ||||| || ||||| || || ||||| ||||||||||
Sbjct: 9574873 tgatggtcttgatggggttgaatttgtagtggacgggggatgccgggcaggcgaggtggt 9574932
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| ||||||||||
Sbjct: 9574933 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatgagctcgaacc 9574992
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| |||| ||||||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 9574993 gcgggtcggcgaggtggcgcgcgacgttctccttgcgccccgtgaagaagttgtcgacga 9575052
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
|||| ||||||||||| | | || ||| |||||||||||||||||||||||| || |
Sbjct: 9575053 cgatgacgctgtccccgcgggcaagcagctcgtcgacgaggtggctgccgacgaagcccg 9575112
Query: 585 ccccgcctgtgacgacgacgcgg 607
| || || |||||||||||||||
Sbjct: 9575113 ctccccccgtgacgacgacgcgg 9575135
Score = 58.0 bits (29), Expect = 9e-006
Identities = 98/121 (80%)
Strand = Plus / Plus
Query: 226 ctccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaaaa 285
||||||||||||||| ||||| |||||||| || || ||||| || || ||||| || ||
Sbjct: 9574516 ctccttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaa 9574575
Query: 286 ccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtctt 345
|| || || || | |||||||| |||| ||| ||||| || ||||| |||||||||||
Sbjct: 9574576 ccgggctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtctt 9574635
Query: 346 g 346
|
Sbjct: 9574636 g 9574636
Score = 56.0 bits (28), Expect = 4e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 116 acctcaacaccagcaccacgatgatagtccatagttgaagtctcggctgttctcttcccc 175
||||||||||| ||||| ||||| || ||||| || |||||| ||||||||||| |||
Sbjct: 9574278 acctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccc 9574337
Query: 176 tcatcataacagctcctaac 195
|| || ||||| ||||||||
Sbjct: 9574338 tcgtcgtaacaactcctaac 9574357
Score = 44.1 bits (22), Expect = 0.14
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 ccatcatcgagacacatacgaggaccatatgtattgaa 99
|||||||| | |||||||||||| |||||||| |||||
Sbjct: 9573642 ccatcatctaaacacatacgagggccatatgtgttgaa 9573679
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1012D10
Length = 168267
Score = 141 bits (71), Expect = 8e-031
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 105330 tgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgaggtggt 105389
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | ||||| || ||||| || |||||||||| || |||||| |
Sbjct: 105390 agatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcgaatc 105449
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| ||||| |||||||||||| ||||| ||||| | || ||||||||||||||||| |
Sbjct: 105450 gcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacga 105509
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | || ||||| ||||||||||| ||||||||||| |
Sbjct: 105510 cgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccgg 105569
Query: 585 ccccgcctgtgacga 599
| ||||| |||||||
Sbjct: 105570 cgccgcccgtgacga 105584
Score = 61.9 bits (31), Expect = 6e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||||||
Sbjct: 103294 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 103353
Query: 93 tattgaaaatgcgggcaat 111
| || ||||| || |||||
Sbjct: 103354 tgttaaaaatccgagcaat 103372
>gb|AACV01000881.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000881, whole
genome shotgun sequence
Length = 15617
Score = 141 bits (71), Expect = 8e-031
Identities = 209/255 (81%)
Strand = Plus / Minus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 10584 tgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgaggtggt 10525
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | ||||| || ||||| || |||||||||| || |||||| |
Sbjct: 10524 agatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcgaatc 10465
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| ||||| |||||||||||| ||||| ||||| | || ||||||||||||||||| |
Sbjct: 10464 gcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacga 10405
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | || ||||| ||||||||||| ||||||||||| |
Sbjct: 10404 cgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccgg 10345
Query: 585 ccccgcctgtgacga 599
| ||||| |||||||
Sbjct: 10344 cgccgcccgtgacga 10330
Score = 61.9 bits (31), Expect = 6e-007
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||||||
Sbjct: 12620 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 12561
Query: 93 tattgaaaatgcgggcaat 111
| || ||||| || |||||
Sbjct: 12560 tgttaaaaatccgagcaat 12542
>ref|NT_079961.2| Oryza sativa (japonica cultivar-group)
Length = 3480660
Score = 141 bits (71), Expect = 8e-031
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 400052 tgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgaggtggt 400111
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | ||||| || ||||| || |||||||||| || |||||| |
Sbjct: 400112 agatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcgaatc 400171
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| ||||| |||||||||||| ||||| ||||| | || ||||||||||||||||| |
Sbjct: 400172 gcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacga 400231
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | || ||||| ||||||||||| ||||||||||| |
Sbjct: 400232 cgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccgg 400291
Query: 585 ccccgcctgtgacga 599
| ||||| |||||||
Sbjct: 400292 cgccgcccgtgacga 400306
Score = 61.9 bits (31), Expect = 6e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||||||
Sbjct: 398016 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 398075
Query: 93 tattgaaaatgcgggcaat 111
| || ||||| || |||||
Sbjct: 398076 tgttaaaaatccgagcaat 398094
>gb|CH401165.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000002
genomic scaffold, whole genome shotgun sequence
Length = 5008528
Score = 141 bits (71), Expect = 8e-031
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| |||||||| ||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 310852 tgatggtcttgatggggttgtacttgtagtgcacggggctagcggggcaggcgaggtggt 310911
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | ||||| || ||||| || |||||||||| || |||||| |
Sbjct: 310912 agatctggtcgacctcgagcaggatgggctcgacgacgtcgtggcggatcacctcgaatc 310971
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
| ||||| |||||||||||| ||||| ||||| | || ||||||||||||||||| |
Sbjct: 310972 gcgggttggcgaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacga 311031
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | || ||||| ||||||||||| ||||||||||| |
Sbjct: 311032 cgatcacgctgtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccgg 311091
Query: 585 ccccgcctgtgacga 599
| ||||| |||||||
Sbjct: 311092 cgccgcccgtgacga 311106
Score = 61.9 bits (31), Expect = 6e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||||||
Sbjct: 308816 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 308875
Query: 93 tattgaaaatgcgggcaat 111
| || ||||| || |||||
Sbjct: 308876 tgttaaaaatccgagcaat 308894
>gb|CB646118.1|CB646118 OSJNEb08F06.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08F06 5', mRNA sequence
Length = 778
Score = 137 bits (69), Expect = 1e-029
Identities = 210/257 (81%)
Strand = Plus / Minus
Query: 335 acatttgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcat 394
||||| |||||||| ||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 340 acattggtcttgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcag 281
Query: 395 gcgaggtggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagc 454
||||||||||||||| ||||||| | | |||||| || ||||| || |||||||||| |
Sbjct: 280 gcgaggtggtagatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatc 221
Query: 455 agctcgaaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaag 514
| |||||| ||||| | || ||||||| | ||||||||||||| || ||||| | |
Sbjct: 220 atctcgaagtttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacagg 161
Query: 515 ttgtcgaccacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccg 574
||||| ||||||||||||||||| || |||| | |||||||| || |||||||| ||
Sbjct: 160 ttgtccaccacgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctcccc 101
Query: 575 acgaaccctgccccgcc 591
|||||||| || |||||
Sbjct: 100 acgaacccggcgccgcc 84
Score = 75.8 bits (38), Expect = 4e-011
Identities = 137/170 (80%)
Strand = Plus / Minus
Query: 32 gcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatat 91
||||| |||||||| |||||||| || ||||||||||||| ||||| ||||| ||||||
Sbjct: 643 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 584
Query: 92 gtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccatagtt 151
|| ||||| || || || || | ||||||| |||||||| ||||||||||| ||
Sbjct: 583 gtgttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtc 524
Query: 152 gaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|||| || ||||| | ||| |||||||| ||||| ||||| ||||||||
Sbjct: 523 aaagtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaat 474
>gb|CB661723.1|CB661723 OSJNEd05A04.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A04 5', mRNA sequence
Length = 720
Score = 137 bits (69), Expect = 1e-029
Identities = 210/257 (81%)
Strand = Plus / Minus
Query: 335 acatttgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcat 394
||||| |||||||| ||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 422 acattggtcttgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcag 363
Query: 395 gcgaggtggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagc 454
||||||||||||||| ||||||| | | |||||| || ||||| || |||||||||| |
Sbjct: 362 gcgaggtggtagatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatc 303
Query: 455 agctcgaaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaag 514
| |||||| ||||| | || ||||||| | ||||||||||||| || ||||| | |
Sbjct: 302 atctcgaagtttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacagg 243
Query: 515 ttgtcgaccacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccg 574
||||| ||||||||||||||||| || |||| | |||||||| || |||||||| ||
Sbjct: 242 ttgtccaccacgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctcccc 183
Query: 575 acgaaccctgccccgcc 591
|||||||| || |||||
Sbjct: 182 acgaacccggcgccgcc 166
Score = 71.9 bits (36), Expect = 6e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 38 gcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatgtattg 97
|||||||| |||||||| || ||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 719 gcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatgtgttg 660
Query: 98 aaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccatagttgaagtc 157
|| || || || || | ||||||| |||||||| ||||||||||| || ||||
Sbjct: 659 aagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtcaaagtt 600
Query: 158 tcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|| ||||| | ||| |||||||| ||||| ||||| ||||||||
Sbjct: 599 tcagctgtgcgcttgccctcatcgtaacaactcctcacaccaat 556
>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full
insert sequence
Length = 1734
Score = 137 bits (69), Expect = 1e-029
Identities = 210/257 (81%)
Strand = Plus / Minus
Query: 335 acatttgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcat 394
||||| |||||||| ||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 804 acattggtcttgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcag 745
Query: 395 gcgaggtggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagc 454
||||||||||||||| ||||||| | | |||||| || ||||| || |||||||||| |
Sbjct: 744 gcgaggtggtagatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatc 685
Query: 455 agctcgaaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaag 514
| |||||| ||||| | || ||||||| | ||||||||||||| || ||||| | |
Sbjct: 684 atctcgaagtttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacagg 625
Query: 515 ttgtcgaccacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccg 574
||||| ||||||||||||||||| || |||| | |||||||| || |||||||| ||
Sbjct: 624 ttgtccaccacgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctcccc 565
Query: 575 acgaaccctgccccgcc 591
|||||||| || |||||
Sbjct: 564 acgaacccggcgccgcc 548
Score = 75.8 bits (38), Expect = 4e-011
Identities = 137/170 (80%)
Strand = Plus / Minus
Query: 32 gcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatat 91
||||| |||||||| |||||||| || ||||||||||||| ||||| ||||| ||||||
Sbjct: 1107 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 1048
Query: 92 gtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccatagtt 151
|| ||||| || || || || | ||||||| |||||||| ||||||||||| ||
Sbjct: 1047 gtgttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtc 988
Query: 152 gaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|||| || ||||| | ||| |||||||| ||||| ||||| ||||||||
Sbjct: 987 aaagtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaat 938
>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for
UDP-glucuronic acid decarboxylase, complete cds
Length = 1555
Score = 137 bits (69), Expect = 1e-029
Identities = 210/257 (81%)
Strand = Plus / Minus
Query: 335 acatttgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcat 394
||||| |||||||| ||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 730 acattggtcttgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcag 671
Query: 395 gcgaggtggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagc 454
||||||||||||||| ||||||| | | |||||| || ||||| || |||||||||| |
Sbjct: 670 gcgaggtggtagatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatc 611
Query: 455 agctcgaaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaag 514
| |||||| ||||| | || ||||||| | ||||||||||||| || ||||| | |
Sbjct: 610 atctcgaagtttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacagg 551
Query: 515 ttgtcgaccacgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccg 574
||||| ||||||||||||||||| || |||| | |||||||| || |||||||| ||
Sbjct: 550 ttgtccaccacgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctcccc 491
Query: 575 acgaaccctgccccgcc 591
|||||||| || |||||
Sbjct: 490 acgaacccggcgccgcc 474
Score = 75.8 bits (38), Expect = 4e-011
Identities = 137/170 (80%)
Strand = Plus / Minus
Query: 32 gcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatat 91
||||| |||||||| |||||||| || ||||||||||||| ||||| ||||| ||||||
Sbjct: 1033 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 974
Query: 92 gtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccatagtt 151
|| ||||| || || || || | ||||||| |||||||| ||||||||||| ||
Sbjct: 973 gtgttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtc 914
Query: 152 gaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|||| || ||||| | ||| |||||||| ||||| ||||| ||||||||
Sbjct: 913 aaagtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaat 864
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
complete sequence
Length = 164064
Score = 125 bits (63), Expect = 5e-026
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| ||||||| ||||| |||||||| |||||||| || |||||||| ||||||||||
Sbjct: 146714 tgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcaggcgaggtggt 146773
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| || ||||||
Sbjct: 146774 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatcatctcgaagt 146833
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||| | || ||||||| | ||||||||||||| || ||||| | |||||| ||||
Sbjct: 146834 ttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacaggttgtccacca 146893
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | |||||||| || |||||||| || |||||||| |
Sbjct: 146894 cgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctccccacgaacccgg 146953
Query: 585 ccccgcc 591
| |||||
Sbjct: 146954 cgccgcc 146960
Score = 61.9 bits (31), Expect = 6e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||||| ||||| ||||| |||||||
Sbjct: 144435 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 144494
Query: 93 tattgaa 99
| |||||
Sbjct: 144495 tgttgaa 144501
Score = 46.1 bits (23), Expect = 0.035
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 128 gcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatcataacag 187
|||||||| ||||||||||| || |||| || ||||| | ||| |||||||| |||||
Sbjct: 144628 gcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaa 144687
Query: 188 ctcctaacacc 198
||||| |||||
Sbjct: 144688 ctcctcacacc 144698
>gb|AACV01011960.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011960, whole
genome shotgun sequence
Length = 33954
Score = 125 bits (63), Expect = 5e-026
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| ||||||| ||||| |||||||| |||||||| || |||||||| ||||||||||
Sbjct: 12539 tgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcaggcgaggtggt 12598
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| || ||||||
Sbjct: 12599 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatcatctcgaagt 12658
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||| | || ||||||| | ||||||||||||| || ||||| | |||||| ||||
Sbjct: 12659 ttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacaggttgtccacca 12718
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | |||||||| || |||||||| || |||||||| |
Sbjct: 12719 cgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctccccacgaacccgg 12778
Query: 585 ccccgcc 591
| |||||
Sbjct: 12779 cgccgcc 12785
Score = 61.9 bits (31), Expect = 6e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||||| ||||| ||||| |||||||
Sbjct: 10260 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 10319
Query: 93 tattgaa 99
| |||||
Sbjct: 10320 tgttgaa 10326
Score = 46.1 bits (23), Expect = 0.035
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 128 gcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatcataacag 187
|||||||| ||||||||||| || |||| || ||||| | ||| |||||||| |||||
Sbjct: 10453 gcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaa 10512
Query: 188 ctcctaacacc 198
||||| |||||
Sbjct: 10513 ctcctcacacc 10523
>ref|NT_107210.1| Oryza sativa (japonica cultivar-group)
Length = 1353368
Score = 125 bits (63), Expect = 5e-026
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| ||||||| ||||| |||||||| |||||||| || |||||||| ||||||||||
Sbjct: 195946 tgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcaggcgaggtggt 196005
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| || ||||||
Sbjct: 196006 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatcatctcgaagt 196065
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||| | || ||||||| | ||||||||||||| || ||||| | |||||| ||||
Sbjct: 196066 ttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacaggttgtccacca 196125
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | |||||||| || |||||||| || |||||||| |
Sbjct: 196126 cgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctccccacgaacccgg 196185
Query: 585 ccccgcc 591
| |||||
Sbjct: 196186 cgccgcc 196192
Score = 61.9 bits (31), Expect = 6e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||||| ||||| ||||| |||||||
Sbjct: 193667 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 193726
Query: 93 tattgaa 99
| |||||
Sbjct: 193727 tgttgaa 193733
Score = 46.1 bits (23), Expect = 0.035
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 128 gcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatcataacag 187
|||||||| ||||||||||| || |||| || ||||| | ||| |||||||| |||||
Sbjct: 193860 gcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaa 193919
Query: 188 ctcctaacacc 198
||||| |||||
Sbjct: 193920 ctcctcacacc 193930
>gb|CH401205.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000042 genomic
scaffold, whole genome shotgun sequence
Length = 2493951
Score = 125 bits (63), Expect = 5e-026
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| ||||||| ||||| |||||||| |||||||| || |||||||| ||||||||||
Sbjct: 2084269 tgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcaggcgaggtggt 2084328
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| || ||||||
Sbjct: 2084329 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatcatctcgaagt 2084388
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||| | || ||||||| | ||||||||||||| || ||||| | |||||| ||||
Sbjct: 2084389 ttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacaggttgtccacca 2084448
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | |||||||| || |||||||| || |||||||| |
Sbjct: 2084449 cgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctccccacgaacccgg 2084508
Query: 585 ccccgcc 591
| |||||
Sbjct: 2084509 cgccgcc 2084515
Score = 61.9 bits (31), Expect = 6e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||||| ||||| ||||| |||||||
Sbjct: 2081990 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 2082049
Query: 93 tattgaa 99
| |||||
Sbjct: 2082050 tgttgaa 2082056
Score = 46.1 bits (23), Expect = 0.035
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 128 gcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatcataacag 187
|||||||| ||||||||||| || |||| || ||||| | ||| |||||||| |||||
Sbjct: 2082183 gcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaa 2082242
Query: 188 ctcctaacacc 198
||||| |||||
Sbjct: 2082243 ctcctcacacc 2082253
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 125 bits (63), Expect = 5e-026
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| ||||||| ||||| |||||||| |||||||| || |||||||| ||||||||||
Sbjct: 16890531 tgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcaggcgaggtggt 16890590
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| || ||||||
Sbjct: 16890591 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatcatctcgaagt 16890650
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||| | || ||||||| | ||||||||||||| || ||||| | |||||| ||||
Sbjct: 16890651 ttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacaggttgtccacca 16890710
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | |||||||| || |||||||| || |||||||| |
Sbjct: 16890711 cgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctccccacgaacccgg 16890770
Query: 585 ccccgcc 591
| |||||
Sbjct: 16890771 cgccgcc 16890777
Score = 61.9 bits (31), Expect = 6e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||||| ||||| ||||| |||||||
Sbjct: 16888252 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 16888311
Query: 93 tattgaa 99
| |||||
Sbjct: 16888312 tgttgaa 16888318
Score = 46.1 bits (23), Expect = 0.035
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 128 gcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatcataacag 187
|||||||| ||||||||||| || |||| || ||||| | ||| |||||||| |||||
Sbjct: 16888445 gcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaa 16888504
Query: 188 ctcctaacacc 198
||||| |||||
Sbjct: 16888505 ctcctcacacc 16888515
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 125 bits (63), Expect = 5e-026
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 345 tgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgaggtggt 404
|||| ||||||| ||||| |||||||| |||||||| || |||||||| ||||||||||
Sbjct: 17202579 tgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcaggcgaggtggt 17202638
Query: 405 agatccggtcgacataaaagaggattggttcgactacatcgtggcggagcagctcgaacc 464
||||| ||||||| | | |||||| || ||||| || |||||||||| || ||||||
Sbjct: 17202639 agatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatcatctcgaagt 17202698
Query: 465 gggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgacca 524
||||| | || ||||||| | ||||||||||||| || ||||| | |||||| ||||
Sbjct: 17202699 ttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacaggttgtccacca 17202758
Query: 525 cgatcacgctgtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctg 584
||||||||||||| || |||| | |||||||| || |||||||| || |||||||| |
Sbjct: 17202759 cgatcacgctgtcgccgcgctccaccagccggtccaccaggtggctccccacgaacccgg 17202818
Query: 585 ccccgcc 591
| |||||
Sbjct: 17202819 cgccgcc 17202825
Score = 61.9 bits (31), Expect = 6e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 33 cctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatatg 92
|||| |||||||| |||||||| || ||||||||||||| ||||| ||||| |||||||
Sbjct: 17200300 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 17200359
Query: 93 tattgaa 99
| |||||
Sbjct: 17200360 tgttgaa 17200366
Score = 46.1 bits (23), Expect = 0.035
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 128 gcaccacgatgatagtccatagttgaagtctcggctgttctcttcccctcatcataacag 187
|||||||| ||||||||||| || |||| || ||||| | ||| |||||||| |||||
Sbjct: 17200493 gcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaa 17200552
Query: 188 ctcctaacacc 198
||||| |||||
Sbjct: 17200553 ctcctcacacc 17200563
>gb|CB679658.1|CB679658 OSJNEf03H02.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03H02 5', mRNA sequence
Length = 742
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 374 tgaacgggcgacgcggggcatgcgaggtggtagatccggtcgacataaaagaggattggt 433
|||||||| || |||||||| ||||||||||||||| ||||||| | | |||||| ||
Sbjct: 738 tgaacgggggaagcggggcaggcgaggtggtagatctggtcgacctcgaggaggatgggc 679
Query: 434 tcgactacatcgtggcggagcagctcgaaccgggggttccggaggtggtgcgcgacgttc 493
||||| || |||||||||| || |||||| ||||| | || ||||||| | ||||||
Sbjct: 678 tcgacgacgtcgtggcggatcatctcgaagtttgggttgccgaagtggtgcaccacgttc 619
Query: 494 tccttcctgccggtgaagaagttgtcgaccacgatcacgctgtccccctgctctaggagc 553
||||||| || ||||| | |||||| ||||||||||||||||| || |||| | |||
Sbjct: 618 tccttccgccccgtgaacaggttgtccaccacgatcacgctgtcgccgcgctccaccagc 559
Query: 554 cggtcgacgaggtggctgccgacgaaccctgccccgcc 591
||||| || |||||||| || |||||||| || |||||
Sbjct: 558 cggtccaccaggtggctccccacgaacccggcgccgcc 521
>gb|CA758797.1|CA758797 BR030021000_PLATE_A07_49_051.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030021000_PLATE_A07_49_051.ab1 similar to dTDP-glucose
4-6-dehydratase homolog D18 - Arabidopsis thaliana
gi|928932|emb|CAA89205.1| (Z49239) homolog of
dTDP-glucose 4-6-dehydratases [Arabidopsis thaliana]
gi|136055..., mRNA sequence
Length = 353
Score = 97.6 bits (49), Expect = 1e-017
Identities = 161/197 (81%), Gaps = 1/197 (0%)
Strand = Plus / Minus
Query: 335 acatttgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcat 394
||||| |||||||| ||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 219 acattggtcttgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcag 160
Query: 395 gcgaggtggtagatccggtcgacataaaagaggattggttcgactacatc-gtggcggag 453
||||||||||||||| ||||||| | | |||||| || ||||| || || ||||||||
Sbjct: 159 gcgaggtggtagatctggtcgacctcgaggaggatgggctcgacgacgtcggtggcggat 100
Query: 454 cagctcgaaccgggggttccggaggtggtgcgcgacgttctccttcctgccggtgaagaa 513
|| |||||| ||||| | || ||||||| | ||||||||||||| || ||||| |
Sbjct: 99 catctcgaagtttgggttgccgaagtggtgcaccacgttctccttccgccccgtgaacag 40
Query: 514 gttgtcgaccacgatca 530
|||||| ||||||||||
Sbjct: 39 gttgtccaccacgatca 23
>gb|CB640033.1|CB640033 OSJNEa12P21.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa12P21 5', mRNA sequence
Length = 570
Score = 97.6 bits (49), Expect = 1e-017
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 475 gaggtggtgcgcgacgttctccttcctgccggtgaagaagttgtcgaccacgatcacgct 534
|||||||||||| ||||| ||||| | || ||||||||||||||||| |||||||||||
Sbjct: 559 gaggtggtgcgccacgttgtccttgcgccccgtgaagaagttgtcgacgacgatcacgct 500
Query: 535 gtccccctgctctaggagccggtcgacgaggtggctgccgacgaaccctgccccgcctgt 594
||| || |||| | || ||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct: 499 gtcgccgcgctccaccaggcggtccacgaggtggctcccgacgaacccggcgccgcccgt 440
Query: 595 gacga 599
|||||
Sbjct: 439 gacga 435
>gb|CF303741.1|CF303741 ABF1--03-B12.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-B12, mRNA sequence
Length = 552
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 335 acatttgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcat 394
||||| |||||||| ||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 170 acattggtcttgattgtcttgacggggttgtacttgtagtgaacgggggaagcggggcag 111
Query: 395 gcgaggtggtagatccggtcgacataaaagaggattggttcgactacatcgtggcggagc 454
||||||||||||||| ||||||| | | |||||| || ||||| || |||||||||| |
Sbjct: 110 gcgaggtggtagatctggtcgacctcgaggaggatgggctcgacgacgtcgtggcggatc 51
Query: 455 agctcgaa 462
| ||||||
Sbjct: 50 atctcgaa 43
Score = 69.9 bits (35), Expect = 2e-009
Identities = 136/170 (80%)
Strand = Plus / Minus
Query: 32 gcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatat 91
||||| |||||| | |||||||| || ||||||||||||| ||||| ||||| ||||||
Sbjct: 473 gcctgagcaacanagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 414
Query: 92 gtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccatagtt 151
|| ||||| || || || || | ||||||| |||||||| ||||||||||| ||
Sbjct: 413 gtgttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtc 354
Query: 152 gaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|||| || ||||| | ||| |||||||| ||||| ||||| ||||||||
Sbjct: 353 aaagtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaat 304
>gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydratase-like protein mRNA,
partial cds
Length = 773
Score = 81.8 bits (41), Expect = 6e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 29 agtgcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggacca 88
|||||||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||
Sbjct: 337 agtgcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggacca 278
Query: 89 tatgtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccata 148
||||| || ||||| || ||||| | |||||||| |||||||| || || |||||
Sbjct: 277 tatgtgttaaaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatg 218
Query: 149 gttgaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|| | || || ||||| | ||| ||||||||||| ||||| |||||||||||
Sbjct: 217 gtcaacgtttcagctgtgcgcttgccctcatcatagcagcttctaacaccaat 165
>dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G06, full
insert sequence
Length = 1057
Score = 81.8 bits (41), Expect = 6e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 29 agtgcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggacca 88
|||||||| |||||||| |||||||| || ||||||||||| | ||||| |||||||||
Sbjct: 342 agtgcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggacca 283
Query: 89 tatgtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccata 148
||||| || ||||| || ||||| | |||||||| |||||||| || || |||||
Sbjct: 282 tatgtgttaaaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatg 223
Query: 149 gttgaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|| | || || ||||| | ||| ||||||||||| ||||| |||||||||||
Sbjct: 222 gtcaacgtttcagctgtgcgcttgccctcatcatagcagcttctaacaccaat 170
>gb|CB661724.1|CB661724 OSJNEd05A04.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A04 3', mRNA sequence
Length = 831
Score = 75.8 bits (38), Expect = 4e-011
Identities = 137/170 (80%)
Strand = Plus / Plus
Query: 32 gcctgtgcaacaaaattgctgaccacgcggccatcatcgagacacatacgaggaccatat 91
||||| |||||||| |||||||| || ||||||||||||| ||||| ||||| ||||||
Sbjct: 618 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 677
Query: 92 gtattgaaaatgcgggcaatacgcacctcaacaccagcaccacgatgatagtccatagtt 151
|| ||||| || || || || | ||||||| |||||||| ||||||||||| ||
Sbjct: 678 gtgttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtc 737
Query: 152 gaagtctcggctgttctcttcccctcatcataacagctcctaacaccaat 201
|||| || ||||| | ||| |||||||| ||||| ||||| ||||||||
Sbjct: 738 aaagtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaat 787
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,515,597
Number of Sequences: 438736
Number of extensions: 1515597
Number of successful extensions: 17379
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16297
Number of HSP's gapped (non-prelim): 1011
length of query: 950
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 929
effective length of database: 2,791,206,460
effective search space: 2593030801340
effective search space used: 2593030801340
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)