BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3848982.2.1
(697 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA 121 5e-025
dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA... 117 8e-024
dbj|AP005289.2| Oryza sativa (japonica cultivar-group) geno... 103 1e-019
gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) c... 103 1e-019
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 103 1e-019
dbj|AP005072.3| Oryza sativa (japonica cultivar-group) geno... 103 1e-019
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 103 1e-019
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 103 1e-019
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 103 1e-019
gb|AACV01010248.1| Oryza sativa (japonica cultivar-group) c... 101 5e-019
gb|AACV01011389.1| Oryza sativa (japonica cultivar-group) c... 101 5e-019
gb|AC119290.2| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
ref|XM_473433.1| Oryza sativa (japonica cultivar-group), p... 101 5e-019
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 101 5e-019
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromoso... 101 5e-019
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 101 5e-019
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 101 5e-019
gb|AQ865692.1|AQ865692 nbeb0026A21r CUGI Rice BAC Library (... 84 1e-013
gb|AQ865772.1|AQ865772 nbeb0026A22r CUGI Rice BAC Library (... 84 1e-013
gb|AACV01010249.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
ref|XM_473434.1| Oryza sativa (japonica cultivar-group), p... 84 1e-013
gb|CD670812.1|CD670812 OsMR231 5MT resistant rice mutant cD... 76 3e-011
gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature lea... 70 2e-009
gb|CF276870.1|CF276870 14ETL--02-D03.b1 Rice etiolated leaf... 70 2e-009
gb|CF277133.1|CF277133 14ETL--02-I21.b1 Rice etiolated leaf... 70 2e-009
gb|CF293831.1|CF293831 30DGS--03-C11.b1 Rice leaf plasmid c... 70 2e-009
gb|CF311056.1|CF311056 ABF--06-C03.b1 ABF3-overexpressing t... 70 2e-009
gb|CF311548.1|CF311548 ABF--06-M21.g1 ABF3-overexpressing t... 70 2e-009
gb|CF328550.1|CF328550 NACL--03-I06.b1 Rice callus plasmid ... 70 2e-009
gb|CF333825.1|CF333825 JMT--02-N24.b1 AtJMT-overexpressing ... 70 2e-009
gb|CV720797.1|CV720797 YBH--01-O04.b1 Rice before heading y... 70 2e-009
dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 70 2e-009
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 70 2e-009
gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
ref|NM_197700.1| Oryza sativa (japonica cultivar-group) bet... 70 2e-009
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 70 2e-009
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OS... 66 3e-008
gb|AACV01007462.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|AU198282.1|AU198282 AU198282 Rice green shoot Oryza sati... 62 4e-007
dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
ref|NM_197699.1| Oryza sativa (japonica cultivar-group) bet... 62 4e-007
gb|AQ259290.1|AQ259290 nbxb0022M06f CUGI Rice BAC Library O... 56 3e-005
gb|AU101525.1|AU101525 AU101525 Rice cDNA from immature lea... 56 3e-005
gb|AU184759.1|AU184759 AU184759 Rice root Oryza sativa (jap... 56 3e-005
gb|CF332237.1|CF332237 NACL--08-K17.g1 Rice callus plasmid ... 56 3e-005
gb|CD670675.1|CD670675 OsMR090 5MT resistant rice mutant cD... 56 3e-005
dbj|AK059638.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AP003875.3| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|AACV01017536.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NM_197698.1| Oryza sativa (japonica cultivar-group) bet... 56 3e-005
ref|XM_467145.1| Oryza sativa (japonica cultivar-group), mRNA 56 3e-005
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 56 3e-005
gb|CH401229.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|CF326079.1|CF326079 JMT1--05-A19.g1 AtJMT-overexpressing... 48 0.006
gb|CD670632.1|CD670632 OsMR047 5MT resistant rice mutant cD... 44 0.100
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 44 0.100
dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.100
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 44 0.100
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 44 0.100
gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) c... 44 0.100
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 44 0.100
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.100
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.100
dbj|AK119750.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.39
gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 ... 42 0.39
gb|AACV01008037.1| Oryza sativa (japonica cultivar-group) c... 42 0.39
gb|AACV01022831.1| Oryza sativa (japonica cultivar-group) c... 42 0.39
ref|NM_185013.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.39
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 42 0.39
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
>ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 822
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 367 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 426
Query: 102 gccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtggcgtgcaac 161
| ||| |||||||| ||||||||| || | |||||| ||| | ||||| |||||||
Sbjct: 427 gacgatcagctccgcaacgccggcaagctcccagtccaatacgctagggtgccgtgcaaa 486
Query: 162 tggaacggcttggacatcgccttcagggtggacgccggctc 202
||| | || |||||||||| ||| ||||||||||||||||
Sbjct: 487 tggcagggggtggacatcgcgttccgggtggacgccggctc 527
Score = 91.7 bits (46), Expect = 5e-016
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 710 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 769
Query: 433 ggcagcccggcagaacctaccgctccgtcgtcaacttc 470
||||||||||| | || ||||| ||| |||| ||||||
Sbjct: 770 ggcagcccggcggcacgtaccggtccatcgtgaacttc 807
>dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034A12, full
insert sequence
Length = 1250
Score = 117 bits (59), Expect = 8e-024
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 463 gagccggtccacttcgacctgagcgggacggcgttcggtgccatggcgaatcctggccag 522
Query: 102 gccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtggcgtgcaac 161
||||||||||| || ||||||| ||| ||| ||||||||| |||||| ||||||||
Sbjct: 523 gccgaccagctgcgcgccgccggcgtcctccaaatccagtacaaccgggtgccgtgcaac 582
Query: 162 tgg 164
|||
Sbjct: 583 tgg 585
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 794 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccggct 853
Query: 433 ggcagcccggc 443
|| ||||||||
Sbjct: 854 ggaagcccggc 864
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_F09
Length = 139371
Score = 103 bits (52), Expect = 1e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 91893 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 91952
Query: 102 gccgaccagctccggaacgccggc 125
| ||| |||||||| |||||||||
Sbjct: 91953 gacgatcagctccgcaacgccggc 91976
Score = 91.7 bits (46), Expect = 5e-016
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 92530 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 92589
Query: 433 ggcagcccggcagaacctaccgctccgtcgtcaacttc 470
||||||||||| | || ||||| ||| |||| ||||||
Sbjct: 92590 ggcagcccggcggcacgtaccggtccatcgtgaacttc 92627
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccc 424
||||||||||||| | |||||||| ||| |||||||| | ||||||||||||
Sbjct: 102739 tccgcctcacctccgactccggcaaggtgctcgtcgcaaacaacgtcatccc 102790
Score = 46.1 bits (23), Expect = 0.025
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 172 tggacatcgccttcagggtggacgccggctc 202
|||||||||| ||| ||||||||||||||||
Sbjct: 92317 tggacatcgcgttccgggtggacgccggctc 92347
>gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005076, whole
genome shotgun sequence
Length = 21571
Score = 103 bits (52), Expect = 1e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 1591 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 1650
Query: 102 gccgaccagctccggaacgccggc 125
| ||| |||||||| |||||||||
Sbjct: 1651 gacgatcagctccgcaacgccggc 1674
Score = 85.7 bits (43), Expect = 3e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 2228 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 2287
Query: 433 ggcagcccggc 443
|||||||||||
Sbjct: 2288 ggcagcccggc 2298
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccc 424
||||||||||||| | |||||||| ||| |||||||| | ||||||||||||
Sbjct: 12438 tccgcctcacctccgactccggcaaggtgctcgtcgcaaacaacgtcatccc 12489
Score = 46.1 bits (23), Expect = 0.025
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 172 tggacatcgccttcagggtggacgccggctc 202
|||||||||| ||| ||||||||||||||||
Sbjct: 2015 tggacatcgcgttccgggtggacgccggctc 2045
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 103 bits (52), Expect = 1e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 1822731 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 1822790
Query: 102 gccgaccagctccggaacgccggc 125
| ||| |||||||| |||||||||
Sbjct: 1822791 gacgatcagctccgcaacgccggc 1822814
Score = 91.7 bits (46), Expect = 5e-016
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 1823368 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 1823427
Query: 433 ggcagcccggcagaacctaccgctccgtcgtcaacttc 470
||||||||||| | || ||||| ||| |||| ||||||
Sbjct: 1823428 ggcagcccggcggcacgtaccggtccatcgtgaacttc 1823465
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccc 424
||||||||||||| | |||||||| ||| |||||||| | ||||||||||||
Sbjct: 1833577 tccgcctcacctccgactccggcaaggtgctcgtcgcaaacaacgtcatccc 1833628
Score = 46.1 bits (23), Expect = 0.025
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 172 tggacatcgccttcagggtggacgccggctc 202
|||||||||| ||| ||||||||||||||||
Sbjct: 1823155 tggacatcgcgttccgggtggacgccggctc 1823185
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0708H12
Length = 162381
Score = 103 bits (52), Expect = 1e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 19762 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 19821
Query: 102 gccgaccagctccggaacgccggc 125
| ||| |||||||| |||||||||
Sbjct: 19822 gacgatcagctccgcaacgccggc 19845
Score = 91.7 bits (46), Expect = 5e-016
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 20399 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 20458
Query: 433 ggcagcccggcagaacctaccgctccgtcgtcaacttc 470
||||||||||| | || ||||| ||| |||| ||||||
Sbjct: 20459 ggcagcccggcggcacgtaccggtccatcgtgaacttc 20496
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccc 424
||||||||||||| | |||||||| ||| |||||||| | ||||||||||||
Sbjct: 30608 tccgcctcacctccgactccggcaaggtgctcgtcgcaaacaacgtcatccc 30659
Score = 46.1 bits (23), Expect = 0.025
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 172 tggacatcgccttcagggtggacgccggctc 202
|||||||||| ||| ||||||||||||||||
Sbjct: 20186 tggacatcgcgttccgggtggacgccggctc 20216
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 103 bits (52), Expect = 1e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 13111951 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 13112010
Query: 102 gccgaccagctccggaacgccggc 125
| ||| |||||||| |||||||||
Sbjct: 13112011 gacgatcagctccgcaacgccggc 13112034
Score = 85.7 bits (43), Expect = 3e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 13112588 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 13112647
Query: 433 ggcagcccggc 443
|||||||||||
Sbjct: 13112648 ggcagcccggc 13112658
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccc 424
||||||||||||| | |||||||| ||| |||||||| | ||||||||||||
Sbjct: 13122798 tccgcctcacctccgactccggcaaggtgctcgtcgcaaacaacgtcatccc 13122849
Score = 46.1 bits (23), Expect = 0.025
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 172 tggacatcgccttcagggtggacgccggctc 202
|||||||||| ||| ||||||||||||||||
Sbjct: 13112375 tggacatcgcgttccgggtggacgccggctc 13112405
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 103 bits (52), Expect = 1e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 26565015 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 26565074
Query: 102 gccgaccagctccggaacgccggc 125
| ||| |||||||| |||||||||
Sbjct: 26565075 gacgatcagctccgcaacgccggc 26565098
Score = 85.7 bits (43), Expect = 3e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 26565652 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 26565711
Query: 433 ggcagcccggc 443
|||||||||||
Sbjct: 26565712 ggcagcccggc 26565722
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccc 424
||||||||||||| | |||||||| ||| |||||||| | ||||||||||||
Sbjct: 26575862 tccgcctcacctccgactccggcaaggtgctcgtcgcaaacaacgtcatccc 26575913
Score = 46.1 bits (23), Expect = 0.025
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 172 tggacatcgccttcagggtggacgccggctc 202
|||||||||| ||| ||||||||||||||||
Sbjct: 26565439 tggacatcgcgttccgggtggacgccggctc 26565469
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 103 bits (52), Expect = 1e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 26657732 gagcccgtccacttcgacctgagcgggacggcgttcggcgccatggcaaaacccggccag 26657791
Query: 102 gccgaccagctccggaacgccggc 125
| ||| |||||||| |||||||||
Sbjct: 26657792 gacgatcagctccgcaacgccggc 26657815
Score = 91.7 bits (46), Expect = 5e-016
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 26658369 tccgcctcacgtccggctccggccggacgctcgtcgccagcaacgtcatccccgccgggt 26658428
Query: 433 ggcagcccggcagaacctaccgctccgtcgtcaacttc 470
||||||||||| | || ||||| ||| |||| ||||||
Sbjct: 26658429 ggcagcccggcggcacgtaccggtccatcgtgaacttc 26658466
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccc 424
||||||||||||| | |||||||| ||| |||||||| | ||||||||||||
Sbjct: 26668578 tccgcctcacctccgactccggcaaggtgctcgtcgcaaacaacgtcatccc 26668629
Score = 46.1 bits (23), Expect = 0.025
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 172 tggacatcgccttcagggtggacgccggctc 202
|||||||||| ||| ||||||||||||||||
Sbjct: 26658156 tggacatcgcgttccgggtggacgccggctc 26658186
>gb|AACV01010248.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010248, whole
genome shotgun sequence
Length = 37264
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 1710 gagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccag 1651
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 1650 gccgaccagct 1640
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 1127 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggt 1068
Query: 433 ggcagcccggca 444
|| |||||||||
Sbjct: 1067 ggaagcccggca 1056
>gb|AACV01011389.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011389, whole
genome shotgun sequence
Length = 22266
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 4207 gagccggtccacttcgacctgagcgggacggcgttcggtgccatggcgaatcctggccag 4148
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 4147 gccgaccagct 4137
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 3756 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccggct 3697
Query: 433 ggcagcccggc 443
|| ||||||||
Sbjct: 3696 ggaagcccggc 3686
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06,
complete sequence
Length = 144457
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 103347 gagccggtccacttcgacctgagcgggacggcgttcggtgccatggcgaatcctggccag 103288
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 103287 gccgaccagct 103277
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 102896 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccggct 102837
Query: 433 ggcagcccggc 443
|| ||||||||
Sbjct: 102836 ggaagcccggc 102826
>ref|XM_473433.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 795
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 364 gagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccag 423
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 424 gccgaccagct 434
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 695 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggt 754
Query: 433 ggcagcccggca 444
|| |||||||||
Sbjct: 755 ggaagcccggca 766
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 1396432 gagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccag 1396491
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 1396492 gccgaccagct 1396502
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 1406633 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 1406692
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 1406693 ggcaggccgg 1406702
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 1397015 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggt 1397074
Query: 433 ggcagcccggca 444
|| |||||||||
Sbjct: 1397075 ggaagcccggca 1397086
>gb|CH401195.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000032 genomic
scaffold, whole genome shotgun sequence
Length = 1766531
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 1013182 gagccggtccacttcgacctgagcgggacggcgttcggtgccatggcgaatcctggccag 1013123
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 1013122 gccgaccagct 1013112
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 1012731 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccggct 1012672
Query: 433 ggcagcccggc 443
|| ||||||||
Sbjct: 1012671 ggaagcccggc 1012661
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 5433997 gagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccag 5434056
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 5434057 gccgaccagct 5434067
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 5456390 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 5456449
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 5456450 ggcaggccgg 5456459
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 5434580 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggt 5434639
Query: 433 ggcagcccggca 444
|| |||||||||
Sbjct: 5434640 ggaagcccggca 5434651
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 9814459 gagccggtccacttcgacctgagcgggacggcgttcggtgccatggcgaatcctggccag 9814400
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 9814399 gccgaccagct 9814389
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 9814008 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccggct 9813949
Query: 433 ggcagcccggc 443
|| ||||||||
Sbjct: 9813948 ggaagcccggc 9813938
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 24578096 gagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccag 24578155
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 24578156 gccgaccagct 24578166
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 24600489 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 24600548
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 24600549 ggcaggccgg 24600558
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 24578679 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggt 24578738
Query: 433 ggcagcccggca 444
|| |||||||||
Sbjct: 24578739 ggaagcccggca 24578750
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
complete sequence
Length = 173522
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 50411 gagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccag 50470
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 50471 gccgaccagct 50481
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 60612 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 60671
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 60672 ggcaggccgg 60681
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 50994 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggt 51053
Query: 433 ggcagcccggca 444
|| |||||||||
Sbjct: 51054 ggaagcccggca 51065
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 27619782 gagccggtccacttcgacctgagcggcacggcgttcggtgccatggcgaaccccggccag 27619841
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 27619842 gccgaccagct 27619852
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 27629983 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 27630042
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 27630043 ggcaggccgg 27630052
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 27620365 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccgggt 27620424
Query: 433 ggcagcccggca 444
|| |||||||||
Sbjct: 27620425 ggaagcccggca 27620436
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 101 bits (51), Expect = 5e-019
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 8770905 gagccggtccacttcgacctgagcgggacggcgttcggtgccatggcgaatcctggccag 8770846
Query: 102 gccgaccagct 112
|||||||||||
Sbjct: 8770845 gccgaccagct 8770835
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||||||||| || ||||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 8770454 tccgcctcacgtccagctccggcaagacgctcgtcgccagcaacgtcatcccttccggct 8770395
Query: 433 ggcagcccggc 443
|| ||||||||
Sbjct: 8770394 ggaagcccggc 8770384
>gb|AQ865692.1|AQ865692 nbeb0026A21r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0026A21r, DNA sequence
Length = 468
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 419 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 360
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 359 ggcaggccgg 350
>gb|AQ865772.1|AQ865772 nbeb0026A22r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0026A22r, DNA sequence
Length = 450
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 414 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 355
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 354 ggcaggccgg 345
>gb|AACV01010249.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010249, whole
genome shotgun sequence
Length = 24047
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 20634 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 20693
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 20694 ggcaggccgg 20703
>ref|XM_473434.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 828
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
|||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||| |
Sbjct: 722 tccggctcacctcgggctccggcaaggtgctcgtcgccaacaacgtcatcccctccgggt 781
Query: 433 ggcagcccgg 442
||||| ||||
Sbjct: 782 ggcaggccgg 791
>gb|CD670812.1|CD670812 OsMR231 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 323
Score = 75.8 bits (38), Expect = 3e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 71 ggcgttcggtgccatggcgaagcccggccaggccgaccagct 112
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 54 ggcgttcggtgccatggcgaaccccggccaggccgaccagct 95
>gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60311_1A, mRNA sequence
Length = 378
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 118 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 177
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 178 ctccgccacgccggc 192
>gb|CF276870.1|CF276870 14ETL--02-D03.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-D03, mRNA sequence
Length = 581
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 488 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 547
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 548 ctccgccacgccggc 562
>gb|CF277133.1|CF277133 14ETL--02-I21.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-I21, mRNA sequence
Length = 602
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 512 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 571
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 572 ctccgccacgccggc 586
>gb|CF293831.1|CF293831 30DGS--03-C11.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-C11, mRNA sequence
Length = 632
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 491 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 550
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 551 ctccgccacgccggc 565
>gb|CF311056.1|CF311056 ABF--06-C03.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-C03, mRNA sequence
Length = 585
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 490 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 549
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 550 ctccgccacgccggc 564
>gb|CF311548.1|CF311548 ABF--06-M21.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-M21, mRNA sequence
Length = 583
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 490 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 549
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 550 ctccgccacgccggc 564
>gb|CF328550.1|CF328550 NACL--03-I06.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--03-I06, mRNA sequence
Length = 632
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 490 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 549
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 550 ctccgccacgccggc 564
>gb|CF333825.1|CF333825 JMT--02-N24.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-N24, mRNA sequence
Length = 577
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 484 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 543
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 544 ctccgccacgccggc 558
>gb|CV720797.1|CV720797 YBH--01-O04.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--01-O04, mRNA sequence
Length = 453
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 307 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 366
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 367 ctccgccacgccggc 381
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full
insert sequence
Length = 1313
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 490 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 549
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 550 ctccgccacgccggc 564
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full
insert sequence
Length = 1031
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 234 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 293
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 294 ctccgccacgccggc 308
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence,
complete sequence
Length = 147117
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 4832 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 4773
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 4772 ctccgccacgccggc 4758
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence,
complete sequence
Length = 135510
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 4541 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 4600
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 4601 ctccgccacgccggc 4615
Score = 61.9 bits (31), Expect = 4e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||||| ||| || | | |||||||
Sbjct: 16759 cacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgaccag 16818
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 16819 ctccgccacgccggc 16833
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcc 94
||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 22618 cacttcgacctgagcggcacggcgttcggcgccatggccaagcc 22661
>gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022091, whole
genome shotgun sequence
Length = 36005
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 3835 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 3894
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 3895 ctccgccacgccggc 3909
Score = 61.9 bits (31), Expect = 4e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||||| ||| || | | |||||||
Sbjct: 16053 cacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgaccag 16112
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 16113 ctccgccacgccggc 16127
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcc 94
||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 21912 cacttcgacctgagcggcacggcgttcggcgccatggccaagcc 21955
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3
(OSJNBb0014I11.1), mRNA
Length = 904
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 479 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 538
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 539 ctccgccacgccggc 553
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 3252012 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 3251953
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 3251952 ctccgccacgccggc 3251938
Score = 61.9 bits (31), Expect = 4e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||||| ||| || | | |||||||
Sbjct: 3239794 cacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgaccag 3239735
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 3239734 ctccgccacgccggc 3239720
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcc 94
||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 3233935 cacttcgacctgagcggcacggcgttcggcgccatggccaagcc 3233892
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 9305171 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 9305112
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 9305111 ctccgccacgccggc 9305097
Score = 61.9 bits (31), Expect = 4e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||||| ||| || | | |||||||
Sbjct: 9292953 cacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgaccag 9292894
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 9292893 ctccgccacgccggc 9292879
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcc 94
||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 9287094 cacttcgacctgagcggcacggcgttcggcgccatggccaagcc 9287051
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 20170965 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 20170906
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 20170905 ctccgccacgccggc 20170891
Score = 61.9 bits (31), Expect = 4e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||||| ||| || | | |||||||
Sbjct: 20158747 cacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgaccag 20158688
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 20158687 ctccgccacgccggc 20158673
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcc 94
||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 20152888 cacttcgacctgagcggcacggcgttcggcgccatggccaagcc 20152845
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 21329818 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 21329759
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 21329758 ctccgccacgccggc 21329744
Score = 61.9 bits (31), Expect = 4e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||||| ||| || | | |||||||
Sbjct: 21317600 cacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgaccag 21317541
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 21317540 ctccgccacgccggc 21317526
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcc 94
||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 21311741 cacttcgacctgagcggcacggcgttcggcgccatggccaagcc 21311698
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||
Sbjct: 21341082 cacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccag 21341023
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 21341022 ctccgccacgccggc 21341008
Score = 61.9 bits (31), Expect = 4e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||||||||||| ||||||||||| |||||||||| ||| || | | |||||||
Sbjct: 21328864 cacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgaccag 21328805
Query: 111 ctccggaacgccggc 125
||||| ||||||||
Sbjct: 21328804 ctccgccacgccggc 21328790
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcc 94
||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 21323005 cacttcgacctgagcggcacggcgttcggcgccatggccaagcc 21322962
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from
chromosome 3 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 183327
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggc 103
||||||||| |||||||||| || |||||||||||||||| ||| ||||||||
Sbjct: 80798 cactttgacatgagcgggacagcattcggtgccatggcgaggcctggccaggc 80850
>gb|AACV01007462.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007462, whole
genome shotgun sequence
Length = 20053
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggc 103
||||||||| |||||||||| || |||||||||||||||| ||| ||||||||
Sbjct: 6582 cactttgacatgagcgggacagcattcggtgccatggcgaggcctggccaggc 6634
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggc 103
||||||||| |||||||||| || |||||||||||||||| ||| ||||||||
Sbjct: 11209297 cactttgacatgagcgggacagcattcggtgccatggcgaggcctggccaggc 11209349
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggc 103
||||||||| |||||||||| || |||||||||||||||| ||| ||||||||
Sbjct: 25260004 cactttgacatgagcgggacagcattcggtgccatggcgaggcctggccaggc 25260056
Score = 44.1 bits (22), Expect = 0.100
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggc 88
||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 390254 cacttcgacctcagcggcacggcgttcggcgccatggc 390291
Score = 42.1 bits (21), Expect = 0.39
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 279 agcggcgcggcggcgtgggcg 299
|||||||||||||||||||||
Sbjct: 33092239 agcggcgcggcggcgtgggcg 33092219
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,237,347
Number of Sequences: 438736
Number of extensions: 1237347
Number of successful extensions: 10682
Number of sequences better than 0.5: 94
Number of HSP's better than 0.5 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9950
Number of HSP's gapped (non-prelim): 731
length of query: 697
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 676
effective length of database: 2,791,206,460
effective search space: 1886855566960
effective search space used: 1886855566960
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)