BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3848939.2.1
(952 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA754554.1|CA754554 BR030001000_PLATE_F03_22_029.ab1 OA ... 369 2e-099
gb|CB678992.1|CB678992 OSJNEf01P14.r OSJNEf Oryza sativa (j... 369 2e-099
gb|CB679398.1|CB679398 OSJNEf02N18.f OSJNEf Oryza sativa (j... 369 2e-099
gb|AACV01010468.1| Oryza sativa (japonica cultivar-group) c... 369 2e-099
ref|XM_473863.1| Oryza sativa (japonica cultivar-group), p... 369 2e-099
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 369 2e-099
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 369 2e-099
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 369 2e-099
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 369 2e-099
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 369 2e-099
gb|CB680925.1|CB680925 OSJNEf06H23.r OSJNEf Oryza sativa (j... 367 7e-099
gb|CB681355.1|CB681355 OSJNEf07H22.r OSJNEf Oryza sativa (j... 361 5e-097
gb|CB683325.1|CB683325 OSJNEf11J01.r OSJNEf Oryza sativa (j... 361 5e-097
gb|CB684926.1|CB684926 OSJNEf14O16.r OSJNEf Oryza sativa (j... 361 5e-097
gb|CB680452.1|CB680452 OSJNEf05D04.r OSJNEf Oryza sativa (j... 355 3e-095
gb|CB659556.1|CB659556 OSJNEc16K08.f OSJNEc Oryza sativa (j... 345 3e-092
ref|XM_473862.1| Oryza sativa (japonica cultivar-group), p... 345 3e-092
gb|CB681354.1|CB681354 OSJNEf07H22.f OSJNEf Oryza sativa (j... 323 1e-085
gb|CB660560.1|CB660560 OSJNEd02H15.r OSJNEd Oryza sativa (j... 266 2e-068
dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA... 260 1e-066
gb|AU068610.1|AU068610 AU068610 Rice callus Oryza sativa (j... 258 5e-066
dbj|AK062295.1| Oryza sativa (japonica cultivar-group) cDNA... 230 1e-057
gb|CB685536.1|CB685536 OSJNEf16A07.r OSJNEf Oryza sativa (j... 149 3e-033
gb|CB684838.1|CB684838 OSJNEf14M03.f OSJNEf Oryza sativa (j... 92 7e-016
gb|AQ365861.2|AQ365861 nbxb0064H21f CUGI Rice BAC Library O... 88 1e-014
dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA... 88 1e-014
gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15... 88 1e-014
gb|AACV01022073.1| Oryza sativa (japonica cultivar-group) c... 88 1e-014
ref|NM_197672.1| Oryza sativa (japonica cultivar-group) put... 88 1e-014
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 88 1e-014
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 88 1e-014
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
gb|CB685535.1|CB685535 OSJNEf16A07.f OSJNEf Oryza sativa (j... 86 4e-014
gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening st... 72 6e-010
dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA... 72 6e-010
dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA... 72 6e-010
dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA... 72 6e-010
gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) c... 72 6e-010
gb|AACV01022074.1| Oryza sativa (japonica cultivar-group) c... 72 6e-010
dbj|AB023482.2| Oryza sativa (japonica cultivar-group) geno... 72 6e-010
dbj|AP002864.2| Oryza sativa (japonica cultivar-group) geno... 72 6e-010
ref|NM_197676.1| Oryza sativa (japonica cultivar-group) put... 72 6e-010
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 72 6e-010
ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 72 6e-010
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 72 6e-010
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 72 6e-010
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 72 6e-010
gb|AU081583.1|AU081583 AU081583 Rice cDNA from young root O... 66 4e-008
gb|AU082154.1|AU082154 AU082154 Rice root Oryza sativa (jap... 66 4e-008
gb|AU082158.1|AU082158 AU082158 Rice root Oryza sativa (jap... 66 4e-008
gb|AU082161.1|AU082161 AU082161 Rice root Oryza sativa (jap... 66 4e-008
gb|CA755383.1|CA755383 BR030019000_PLATE_E10_77_082.ab1 OA ... 66 4e-008
gb|CA756160.1|CA756160 BR030036000_PLATE_D01_4_012.ab1 OA O... 66 4e-008
gb|CB000988.1|CB000988 S234F_A10 Rice cold stress germinati... 66 4e-008
gb|CB685490.1|CB685490 OSJNEf15O17.f OSJNEf Oryza sativa (j... 66 4e-008
gb|CF325935.1|CF325935 JMT1--04-K07.g1 AtJMT-overexpressing... 66 4e-008
gb|CV722920.1|CV722920 root--01-P12.g1 Rice root lambda pha... 66 4e-008
gb|CV724379.1|CV724379 root--06-N13.g1 Rice root lambda pha... 66 4e-008
gb|CV724500.1|CV724500 14Salt--01-B21.b1 Salt treated rice ... 66 4e-008
gb|CV724579.1|CV724579 14Salt--01-D21.b1 Salt treated rice ... 66 4e-008
gb|CV725574.1|CV725574 14Salt--02-L17.g1 Salt treated rice ... 66 4e-008
gb|CV725664.1|CV725664 14Salt--02-N21.b1 Salt treated rice ... 66 4e-008
gb|CV725882.1|CV725882 14Salt--03-D14.g1 Salt treated rice ... 66 4e-008
gb|CV727251.1|CV727251 14Salt--05-E24.g1 Salt treated rice ... 66 4e-008
gb|CV727305.1|CV727305 14Salt--05-G05.b1 Salt treated rice ... 66 4e-008
gb|CV728268.1|CV728268 14Salt--06-O07.b1 Salt treated rice ... 66 4e-008
gb|CV728302.1|CV728302 14Salt--06-P02.b1 Salt treated rice ... 66 4e-008
gb|CV728303.1|CV728303 14Salt--06-P02.g1 Salt treated rice ... 66 4e-008
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 66 4e-008
dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid... 66 4e-008
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 66 4e-008
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 66 4e-008
gb|AACV01012630.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
gb|AACV01022075.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
gb|AACV01022076.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
ref|NM_197679.1| Oryza sativa (japonica cultivar-group) put... 66 4e-008
ref|NM_197681.1| Oryza sativa (japonica cultivar-group) put... 66 4e-008
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 66 4e-008
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 66 4e-008
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 66 4e-008
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 66 4e-008
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 66 4e-008
gb|AQ287619.1|AQ287619 nbxb0016C05f CUGI Rice BAC Library O... 62 6e-007
gb|CA755754.1|CA755754 BR030027000_PLATE_F11_86_094.ab1 OA ... 62 6e-007
gb|CF291694.1|CF291694 14ROOT--02-D16.b1 Rice root plasmid ... 62 6e-007
gb|AACV01002671.1| Oryza sativa (japonica cultivar-group) c... 62 6e-007
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
ref|NM_190601.1| Oryza sativa (japonica cultivar-group), p... 62 6e-007
ref|NM_197674.1| Oryza sativa (japonica cultivar-group) put... 62 6e-007
ref|NM_197675.1| Oryza sativa (japonica cultivar-group) put... 62 6e-007
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 62 6e-007
dbj|AP004127.1| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
gb|AU184738.1|AU184738 AU184738 Rice root Oryza sativa (jap... 60 2e-006
gb|AQ796380.1|AQ796380 nbxb0063M17f CUGI Rice BAC Library O... 58 9e-006
gb|AU081582.1|AU081582 AU081582 Rice cDNA from young root O... 58 9e-006
gb|CV725665.1|CV725665 14Salt--02-N21.g1 Salt treated rice ... 58 9e-006
gb|CV727621.1|CV727621 14Salt--05-N17.b1 Salt treated rice ... 58 9e-006
dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
ref|NM_197680.1| Oryza sativa (japonica cultivar-group) put... 58 9e-006
gb|AU198065.1|AU198065 AU198065 Rice green shoot Oryza sati... 56 4e-005
gb|CF325876.1|CF325876 JMT1--04-H12.g1 AtJMT-overexpressing... 56 4e-005
gb|AACV01010255.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
ref|XM_473450.1| Oryza sativa (japonica cultivar-group), p... 56 4e-005
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 56 4e-005
emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromoso... 56 4e-005
gb|AU184680.1|AU184680 AU184680 Rice root Oryza sativa (jap... 54 1e-004
gb|D46826.1|D46826 RICS11741A Rice green shoot Oryza sativa... 52 6e-004
gb|AU095966.1|AU095966 AU095966 Rice green shoot Oryza sati... 52 6e-004
gb|AU095985.1|AU095985 AU095985 Rice green shoot Oryza sati... 52 6e-004
gb|AU096374.1|AU096374 AU096374 Rice green shoot Oryza sati... 52 6e-004
gb|AU198219.1|AU198219 AU198219 Rice green shoot Oryza sati... 52 6e-004
gb|CB649757.1|CB649757 OSJNEb13O02.r OSJNEb Oryza sativa (j... 52 6e-004
gb|CB681630.1|CB681630 OSJNEf08C09.r OSJNEf Oryza sativa (j... 52 6e-004
gb|CB682960.1|CB682960 OSJNEf10M18.f OSJNEf Oryza sativa (j... 52 6e-004
gb|CV722569.1|CV722569 YTPSP--01-N18.b1 TPSP-overexpression... 52 6e-004
dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
ref|XM_474092.1| Oryza sativa (japonica cultivar-group), p... 52 6e-004
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 52 6e-004
emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromoso... 52 6e-004
gb|CF291056.1|CF291056 14ROOT--01-F09.b1 Rice root plasmid ... 50 0.002
gb|CF291057.1|CF291057 14ROOT--01-F09.g1 Rice root plasmid ... 50 0.002
gb|CV725022.1|CV725022 14Salt--01-O08.b1 Salt treated rice ... 50 0.002
gb|CV725023.1|CV725023 14Salt--01-O08.g1 Salt treated rice ... 50 0.002
gb|CV727250.1|CV727250 14Salt--05-E24.b1 Salt treated rice ... 50 0.002
gb|CV727622.1|CV727622 14Salt--05-N17.g1 Salt treated rice ... 50 0.002
dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AC123594.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AACV01021306.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NM_195931.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 50 0.002
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AU029427.1|AU029427 AU029427 Rice panicle shorter than 3... 48 0.009
gb|CB000875.1|CB000875 S345K_D02 Rice cold stress germinati... 48 0.009
gb|AU032568.1|AU032568 AU032568 Rice green shoot Oryza sati... 46 0.035
gb|AU075822.1|AU075822 AU075822 Rice root Oryza sativa (jap... 46 0.035
gb|AU082153.1|AU082153 AU082153 Rice root Oryza sativa (jap... 46 0.035
gb|AU082157.1|AU082157 AU082157 Rice root Oryza sativa (jap... 46 0.035
gb|AU082159.1|AU082159 AU082159 Rice root Oryza sativa (jap... 46 0.035
gb|AU095885.1|AU095885 AU095885 Rice green shoot Oryza sati... 46 0.035
gb|CA758859.1|CA758859 BR030041000_PLATE_B05_34_043.ab1 OA ... 46 0.035
gb|CB679219.1|CB679219 OSJNEf02G23.r OSJNEf Oryza sativa (j... 46 0.035
gb|CB679517.1|CB679517 OSJNEf03B23.f OSJNEf Oryza sativa (j... 46 0.035
gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, c... 46 0.035
gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg... 46 0.035
dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.035
dbj|AP004883.3| Oryza sativa (japonica cultivar-group) geno... 46 0.035
dbj|AP004037.3| Oryza sativa (japonica cultivar-group) geno... 46 0.035
gb|AACV01005096.1| Oryza sativa (japonica cultivar-group) c... 46 0.035
ref|NM_197671.1| Oryza sativa (japonica cultivar-group) put... 46 0.035
ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.035
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 46 0.035
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.035
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.035
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 46 0.035
gb|AU065430.1|AU065430 AU065430 Rice root Oryza sativa (jap... 44 0.14
gb|AU174081.1|AU174081 AU174081 Rice green shoot Oryza sati... 44 0.14
gb|AU223342.1|AU223342 AU223342 Rice shoot Oryza sativa (ja... 44 0.14
gb|CB682961.1|CB682961 OSJNEf10M18.r OSJNEf Oryza sativa (j... 44 0.14
>gb|CA754554.1|CA754554 BR030001000_PLATE_F03_22_029.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030001000_PLATE_F03_22_029.ab1 similar to proline rich
protein homolog WCOR518 - wheat (fragment)
gi|1657851|gb|AAB18205.1| (U73214) cold acclimation
protein WCOR518 [Triticum aestivum], mRNA sequence
Length = 624
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 230 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 289
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 290 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 349
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 350 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 409
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 410 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 469
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 470 cacgtcccctccagcttccagtgccc 495
>gb|CB678992.1|CB678992 OSJNEf01P14.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf01P14 3', mRNA sequence
Length = 689
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 651 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 592
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 591 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 532
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 531 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 472
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 471 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 412
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 411 cacgtcccctccagcttccagtgccc 386
>gb|CB679398.1|CB679398 OSJNEf02N18.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02N18 5', mRNA sequence
Length = 705
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 236 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 295
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 296 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 355
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 356 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 415
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 416 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 475
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 476 cacgtcccctccagcttccagtgccc 501
>gb|AACV01010468.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010468, whole
genome shotgun sequence
Length = 17647
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 7776 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 7717
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 7716 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 7657
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7656 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 7597
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7596 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 7537
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 7536 cacgtcccctccagcttccagtgccc 7511
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 465
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 193 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 252
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 253 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 312
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 313 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 372
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 373 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 432
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 433 cacgtcccctccagcttccagtgccc 458
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 992455 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 992514
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 992515 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 992574
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 992575 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 992634
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 992635 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 992694
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 992695 cacgtcccctccagcttccagtgccc 992720
Score = 345 bits (174), Expect = 3e-092
Identities = 250/274 (91%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 228 cgccgtccacgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtgg 287
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 982028 cgccgtcgacgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtgg 982087
Query: 288 acgcgctcaacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcc 347
||||||| ||||| || | |||||| || ||||| ||| |||| |||||||||||||||
Sbjct: 982088 acgcgctgaacgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcc 982147
Query: 348 cgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaagg 406
|||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 982148 cgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaagg 982207
Query: 407 ccaaggcgctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagt 466
||||||||||| || |||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 982208 ccaaggcgctcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgact 982267
Query: 467 gcggcaagcacgtgccctccagcttccagtgccc 500
|||||||| ||||||||||| ||||||||||||
Sbjct: 982268 gcggcaagtacgtgccctccgacttccagtgccc 982301
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 8790356 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 8790415
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 8790416 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 8790475
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8790476 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 8790535
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8790536 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 8790595
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 8790596 cacgtcccctccagcttccagtgccc 8790621
Score = 56.0 bits (28), Expect = 4e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgctcagcgtc 423
||||||||||| ||||| ||||||||||||| ||||||||||||| | |||| |||||
Sbjct: 5556039 gccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaacgtgctcggcgtc 5556098
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 384 ctgcctctgcaccaccatcaaggccaaggcgctc 417
||||||||||||| ||||||||||||||| ||||
Sbjct: 10494734 ctgcctctgcaccgccatcaaggccaaggtgctc 10494701
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 27934455 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 27934514
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 27934515 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 27934574
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 27934575 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 27934634
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 27934635 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 27934694
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 27934695 cacgtcccctccagcttccagtgccc 27934720
Score = 56.0 bits (28), Expect = 4e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgctcagcgtc 423
||||||||||| ||||| ||||||||||||| ||||||||||||| | |||| |||||
Sbjct: 24700138 gccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaacgtgctcggcgtc 24700197
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 384 ctgcctctgcaccaccatcaaggccaaggcgctc 417
||||||||||||| ||||||||||||||| ||||
Sbjct: 29638833 ctgcctctgcaccgccatcaaggccaaggtgctc 29638800
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
complete sequence
Length = 160484
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 77924 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 77983
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 77984 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 78043
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 78044 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 78103
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 78104 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 78163
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 78164 cacgtcccctccagcttccagtgccc 78189
Score = 345 bits (174), Expect = 3e-092
Identities = 250/274 (91%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 228 cgccgtccacgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtgg 287
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 67497 cgccgtcgacgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtgg 67556
Query: 288 acgcgctcaacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcc 347
||||||| ||||| || | |||||| || ||||| ||| |||| |||||||||||||||
Sbjct: 67557 acgcgctgaacgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcc 67616
Query: 348 cgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaagg 406
|||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 67617 cgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaagg 67676
Query: 407 ccaaggcgctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagt 466
||||||||||| || |||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 67677 ccaaggcgctcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgact 67736
Query: 467 gcggcaagcacgtgccctccagcttccagtgccc 500
|||||||| ||||||||||| ||||||||||||
Sbjct: 67737 gcggcaagtacgtgccctccgacttccagtgccc 67770
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 369 bits (186), Expect = 2e-099
Identities = 247/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 31095843 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 31095902
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 31095903 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 31095962
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 31095963 tccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 31096022
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 31096023 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 31096082
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 31096083 cacgtcccctccagcttccagtgccc 31096108
Score = 345 bits (174), Expect = 3e-092
Identities = 250/274 (91%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 228 cgccgtccacgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtgg 287
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 31085416 cgccgtcgacgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtgg 31085475
Query: 288 acgcgctcaacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcc 347
||||||| ||||| || | |||||| || ||||| ||| |||| |||||||||||||||
Sbjct: 31085476 acgcgctgaacgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcc 31085535
Query: 348 cgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaagg 406
|||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 31085536 cgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaagg 31085595
Query: 407 ccaaggcgctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagt 466
||||||||||| || |||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 31085596 ccaaggcgctcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgact 31085655
Query: 467 gcggcaagcacgtgccctccagcttccagtgccc 500
|||||||| ||||||||||| ||||||||||||
Sbjct: 31085656 gcggcaagtacgtgccctccgacttccagtgccc 31085689
Score = 56.0 bits (28), Expect = 4e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgctcagcgtc 423
||||||||||| ||||| ||||||||||||| ||||||||||||| | |||| |||||
Sbjct: 27727009 gccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaacgtgctcggcgtc 27727068
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 384 ctgcctctgcaccaccatcaaggccaaggcgctc 417
||||||||||||| ||||||||||||||| ||||
Sbjct: 32827253 ctgcctctgcaccgccatcaaggccaaggtgctc 32827220
>gb|CB680925.1|CB680925 OSJNEf06H23.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06H23 3', mRNA sequence
Length = 765
Score = 367 bits (185), Expect = 7e-099
Identities = 246/265 (92%), Gaps = 1/265 (0%)
Strand = Plus / Minus
Query: 237 cgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctca 296
|||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct: 765 cgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctga 706
Query: 297 acggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctgt 356
|||| || | |||||| || ||||| |||| ||||||||||||||||||||||||||||
Sbjct: 705 acgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctgt 646
Query: 357 ccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgc 415
||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 645 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgc 586
Query: 416 tcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaagc 475
|| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 585 tcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaagc 526
Query: 476 acgtgccctccagcttccagtgccc 500
|||| ||||||||||||||||||||
Sbjct: 525 acgtcccctccagcttccagtgccc 501
>gb|CB681355.1|CB681355 OSJNEf07H22.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07H22 3', mRNA sequence
Length = 643
Score = 361 bits (182), Expect = 5e-097
Identities = 246/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 624 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 565
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 564 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 505
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 504 tccggcgtcgccgacctcgacgccgcgctctgcctttgcaccgccatcaaggccaaggcg 445
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 444 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 385
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 384 cacgtcccctccagcttccagtgccc 359
>gb|CB683325.1|CB683325 OSJNEf11J01.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11J01 3', mRNA sequence
Length = 671
Score = 361 bits (182), Expect = 5e-097
Identities = 246/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 659 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 600
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 599 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 540
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| |||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 539 tccggcgtcgccgacctcgacgccgcgctttgcctctgcaccgccatcaaggccaaggcg 480
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 479 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 420
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 419 cacgtcccctccagcttccagtgccc 394
>gb|CB684926.1|CB684926 OSJNEf14O16.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14O16 3', mRNA sequence
Length = 697
Score = 361 bits (182), Expect = 5e-097
Identities = 246/266 (92%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 666 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 607
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || ||||| |||| |||||||||||||||||||||||||||
Sbjct: 606 aacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctg 547
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 546 tccggcgtcgccgacctcgacgccgcgctctgcctttgcaccgccatcaaggccaaggcg 487
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 486 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 427
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| ||||||||||||||||||||
Sbjct: 426 cacgtcccctccagcttccagtgccc 401
>gb|CB680452.1|CB680452 OSJNEf05D04.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf05D04 3', mRNA sequence
Length = 527
Score = 355 bits (179), Expect = 3e-095
Identities = 247/267 (92%), Gaps = 2/267 (0%)
Strand = Plus / Minus
Query: 236 acgccgacgggcaagtgccccgtgga-cacgctgaagctgctggcgtgcgtggacgcgct 294
||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||
Sbjct: 511 acgccgacggggaagtgcccggtggaacacggtgaagctgctggcgtgcgtggacgcgct 452
Query: 295 caacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgct 354
||||| || | |||||| || ||||| |||| ||||||||||||||||||||||||||
Sbjct: 451 gaacgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgct 392
Query: 355 gtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggc 413
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 391 gtccggcgtggccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggc 332
Query: 414 gctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaa 473
|||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 331 gctcggcgtcagcctcgtcctccccgttgccatgtccgtgctcgtcaacgagtgcggcaa 272
Query: 474 gcacgtgccctccagcttccagtgccc 500
|||||| ||||||||||||||||||||
Sbjct: 271 gcacgtcccctccagcttccagtgccc 245
>gb|CB659556.1|CB659556 OSJNEc16K08.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16K08 5', mRNA sequence
Length = 869
Score = 345 bits (174), Expect = 3e-092
Identities = 250/274 (91%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 228 cgccgtccacgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtgg 287
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 333 cgccgtcgacgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtgg 392
Query: 288 acgcgctcaacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcc 347
||||||| ||||| || | |||||| || ||||| ||| |||| |||||||||||||||
Sbjct: 393 acgcgctgaacgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcc 452
Query: 348 cgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaagg 406
|||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 453 cgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaagg 512
Query: 407 ccaaggcgctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagt 466
||||||||||| || |||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 513 ccaaggcgctcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgact 572
Query: 467 gcggcaagcacgtgccctccagcttccagtgccc 500
|||||||| ||||||||||| ||||||||||||
Sbjct: 573 gcggcaagtacgtgccctccgacttccagtgccc 606
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 609
Score = 345 bits (174), Expect = 3e-092
Identities = 250/274 (91%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 228 cgccgtccacgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtgg 287
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 311 cgccgtcgacgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtgg 370
Query: 288 acgcgctcaacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcc 347
||||||| ||||| || | |||||| || ||||| ||| |||| |||||||||||||||
Sbjct: 371 acgcgctgaacgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcc 430
Query: 348 cgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaagg 406
|||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 431 cgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaagg 490
Query: 407 ccaaggcgctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagt 466
||||||||||| || |||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 491 ccaaggcgctcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgact 550
Query: 467 gcggcaagcacgtgccctccagcttccagtgccc 500
|||||||| ||||||||||| ||||||||||||
Sbjct: 551 gcggcaagtacgtgccctccgacttccagtgccc 584
>gb|CB681354.1|CB681354 OSJNEf07H22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07H22 5', mRNA sequence
Length = 685
Score = 323 bits (163), Expect = 1e-085
Identities = 243/267 (91%), Gaps = 2/267 (0%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 23 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 82
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| | ||||| ||| |||| ||||||||||||||||||||||
Sbjct: 83 aacgggctggtgcacgcgggggtcggcgccagggccatcgacacctgctgcccgctgctg 142
Query: 356 tccg-cgtggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| ||| | ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 143 tccggcgtcgacgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcg 202
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 203 ctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaag 262
Query: 475 cac-gtgccctccagcttccagtgccc 500
||| || ||||||||||||||||||||
Sbjct: 263 cacagtcccctccagcttccagtgccc 289
>gb|CB660560.1|CB660560 OSJNEd02H15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02H15 3', mRNA sequence
Length = 716
Score = 266 bits (134), Expect = 2e-068
Identities = 234/266 (87%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctc 295
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 654 acgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctg 595
Query: 296 aacggcctcgcgcacgccgttgtcgggaccaacgccagcgacacctgctgcccgctgctg 355
||||| || | |||||| || || || |||| ||||| |||||||||||||||||||||
Sbjct: 594 aacgggctggtgcacgcggtggttggcgccaaggccagggacacctgctgcccgctgctg 535
Query: 356 tccgcg-tggccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcg 414
|||| | | |||||||| ||||||||| | ||||| |||||| |||||||||||||||||
Sbjct: 534 tccggggttgccgaccttgacgccgcgttttgcctttgcaccgccatcaaggccaaggcg 475
Query: 415 ctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcgtcaacgagtgcggcaag 474
|| | |||||||| || |||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 474 cttggggtcagccttgtcctccccgttgccatttccgtgcttgtcaacgagtgcggcaag 415
Query: 475 cacgtgccctccagcttccagtgccc 500
||||| |||||||| |||||||||||
Sbjct: 414 cacgtcccctccagtttccagtgccc 389
>dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B03, full
insert sequence
Length = 713
Score = 260 bits (131), Expect = 1e-066
Identities = 156/163 (95%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 339 cctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcacca 397
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 156 cctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccg 215
Query: 398 ccatcaaggccaaggcgctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcg 457
|||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||
Sbjct: 216 ccatcaaggccaaggcgctcggcgtcagcctcgtcctccccgttgccatctccgtgctcg 275
Query: 458 tcaacgagtgcggcaagcacgtgccctccagcttccagtgccc 500
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 276 tcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 318
>gb|AU068610.1|AU068610 AU068610 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30533_14A, mRNA sequence
Length = 508
Score = 258 bits (130), Expect = 5e-066
Identities = 167/178 (93%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 324 ccaacgccagcgacacctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgc 382
|||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 30 ccaaggccagcgacacctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgc 89
Query: 383 tctgcctctgcaccaccatcaaggccaaggcgctcagcgtcagcctcgtgctccccgtcg 442
|||||||||||||| |||||||||||||||||||| |||||| | ||| |||||||| |
Sbjct: 90 tctgcctctgcaccgccatcaaggccaaggcgctcggcgtcacctgcgtcctccccgttg 149
Query: 443 ccatctccgtgctcgtcaacgagtgcggcaagcacgtgccctccagcttccagtgccc 500
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 150 ccatctccgtgctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 207
>dbj|AK062295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F05, full
insert sequence
Length = 570
Score = 230 bits (116), Expect = 1e-057
Identities = 168/184 (91%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 268 gaagctgctggcgtgcgtggacgcgctcaacggcctcgcgcacgccgttgtcgggaccaa 327
||||||||||||||||||||||||||| ||||| || | |||||| || ||||| ||||
Sbjct: 1 gaagctgctggcgtgcgtggacgcgctgaacgggctggtgcacgcggtggtcggcgccaa 60
Query: 328 cgccagcgacacctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctg 386
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 61 ggccagcgacacctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgctctg 120
Query: 387 cctctgcaccaccatcaaggccaaggcgctcagcgtcagcctcgtgctccccgtcgccat 446
|||||||||| ||||||||||||||||| || ||||||||||||| |||||||| |||||
Sbjct: 121 cctctgcaccgccatcaaggccaaggcgttcggcgtcagcctcgtcctccccgttgccat 180
Query: 447 ctcc 450
||||
Sbjct: 181 ctcc 184
>gb|CB685536.1|CB685536 OSJNEf16A07.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16A07 3', mRNA sequence
Length = 628
Score = 149 bits (75), Expect = 3e-033
Identities = 96/103 (93%)
Strand = Plus / Minus
Query: 398 ccatcaaggccaaggcgctcagcgtcagcctcgtgctccccgtcgccatctccgtgctcg 457
|||||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |
Sbjct: 628 ccatcaaggccaaggcgctcggggtcagcctcgtcctccccgttgccatctccgtgcttg 569
Query: 458 tcaacgagtgcggcaagcacgtgccctccagcttccagtgccc 500
|||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 568 tcaacgagtggggcaagcacgtcccctccagcttccagtgccc 526
>gb|CB684838.1|CB684838 OSJNEf14M03.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14M03 5', mRNA sequence
Length = 317
Score = 91.7 bits (46), Expect = 7e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 239 ccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgctcaac 298
|||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 242 ccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctgaac 301
Query: 299 gg 300
||
Sbjct: 302 gg 303
>gb|AQ365861.2|AQ365861 nbxb0064H21f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0064H21f, DNA sequence
Length = 568
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 179 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 120
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 119 catcaaggccaa 108
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full
insert sequence
Length = 769
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 343 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 402
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 403 catcaaggccaa 414
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete
sequence
Length = 144798
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 62001 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 62060
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 62061 catcaaggccaa 62072
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 49847 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 49906
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 49907 cgtcaaggccaa 49918
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 34143 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 34187
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 27429 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 27473
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 57280 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 57326
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 53987 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 54033
Score = 58.0 bits (29), Expect = 9e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 30697 cgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 30741
Score = 46.1 bits (23), Expect = 0.035
Identities = 75/91 (82%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| ||| | | |||||| ||||||||| |||||||||||||| |
Sbjct: 66371 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 66430
Query: 399 catcaaggccaaggcgctcagcgtcagcctc 429
| | |||||||| | |||| |||||| ||||
Sbjct: 66431 cgtgaaggccaacgtgctcggcgtcaacctc 66461
>gb|AACV01022073.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022073, whole
genome shotgun sequence
Length = 4713
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 1155 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 1214
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 1215 catcaaggccaa 1226
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer
protein (OSJNBa0015J15.15), mRNA
Length = 429
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 264 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 323
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 324 catcaaggccaa 335
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 3065899 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 3065840
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 3065839 catcaaggccaa 3065828
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 3078053 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 3077994
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 3077993 cgtcaaggccaa 3077982
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 3100471 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 3100427
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 3093757 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 3093713
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 3073913 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 3073867
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 3070620 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 3070574
Score = 58.0 bits (29), Expect = 9e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 3097203 cgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 3097159
Score = 46.1 bits (23), Expect = 0.035
Identities = 75/91 (82%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| ||| | | |||||| ||||||||| |||||||||||||| |
Sbjct: 3061529 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 3061470
Query: 399 catcaaggccaaggcgctcagcgtcagcctc 429
| | |||||||| | |||| |||||| ||||
Sbjct: 3061469 cgtgaaggccaacgtgctcggcgtcaacctc 3061439
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 9100386 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 9100327
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 9100326 catcaaggccaa 9100315
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 9111673 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 9111614
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 9111613 cgtcaaggccaa 9111602
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 9124271 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 9124227
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 9117529 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 9117485
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 9107532 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 9107486
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 9104239 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 9104193
Score = 58.0 bits (29), Expect = 9e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 9120975 cgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 9120931
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 19966180 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 19966121
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 19966120 catcaaggccaa 19966109
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 19977467 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 19977408
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 19977407 cgtcaaggccaa 19977396
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 19990065 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 19990021
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 19983323 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 19983279
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 19973326 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 19973280
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 19970033 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 19969987
Score = 58.0 bits (29), Expect = 9e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 19986769 cgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 19986725
Score = 50.1 bits (25), Expect = 0.002
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 341 tgctgcccgctgctgtcc-gcgtggccgacctcgacgccgcgctctgcctctgcacc 396
||||||||||||||| || | | ||||||||||||||||| ||||||||||||||
Sbjct: 9403199 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 9403143
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 21143705 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 21143646
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 21143645 catcaaggccaa 21143634
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 21155859 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 21155800
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 21155799 cgtcaaggccaa 21155788
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 21178277 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 21178233
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 21171563 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 21171519
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 21151719 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21151673
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 21148426 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21148380
Score = 58.0 bits (29), Expect = 9e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 21175009 cgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21174965
Score = 50.1 bits (25), Expect = 0.002
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 341 tgctgcccgctgctgtcc-gcgtggccgacctcgacgccgcgctctgcctctgcacc 396
||||||||||||||| || | | ||||||||||||||||| ||||||||||||||
Sbjct: 10072390 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 10072334
Score = 46.1 bits (23), Expect = 0.035
Identities = 75/91 (82%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| ||| | | |||||| ||||||||| |||||||||||||| |
Sbjct: 21139335 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 21139276
Query: 399 catcaaggccaaggcgctcagcgtcagcctc 429
| | |||||||| | |||| |||||| ||||
Sbjct: 21139275 cgtgaaggccaacgtgctcggcgtcaacctc 21139245
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 87.7 bits (44), Expect = 1e-014
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
|||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 21154969 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 21154910
Query: 399 catcaaggccaa 410
||||||||||||
Sbjct: 21154909 catcaaggccaa 21154898
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 21167123 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 21167064
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 21167063 cgtcaaggccaa 21167052
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 21189541 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 21189497
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 21182827 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 21182783
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 21162983 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21162937
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 21159690 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21159644
Score = 58.0 bits (29), Expect = 9e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 21186273 cgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21186229
Score = 50.1 bits (25), Expect = 0.002
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 341 tgctgcccgctgctgtcc-gcgtggccgacctcgacgccgcgctctgcctctgcacc 396
||||||||||||||| || | | ||||||||||||||||| ||||||||||||||
Sbjct: 10078429 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 10078373
Score = 46.1 bits (23), Expect = 0.035
Identities = 75/91 (82%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 340 ctgctgcccgctgctgtccg-cgtggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| ||| | | |||||| ||||||||| |||||||||||||| |
Sbjct: 21150599 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 21150540
Query: 399 catcaaggccaaggcgctcagcgtcagcctc 429
| | |||||||| | |||| |||||| ||||
Sbjct: 21150539 cgtgaaggccaacgtgctcggcgtcaacctc 21150509
>gb|CB685535.1|CB685535 OSJNEf16A07.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16A07 5', mRNA sequence
Length = 308
Score = 85.7 bits (43), Expect = 4e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 236 acgccgacgggcaagtgccccgtggacacgctgaagctgctggcgtgcgtggacgcgct 294
||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||||
Sbjct: 240 acgccgacggggaagtggccggtgaacacgctgaagctgctggcgtgcgtggacgcgct 298
>gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11111_4Z, mRNA sequence
Length = 619
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 260 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 303
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full
insert sequence
Length = 1384
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1035 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 1078
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full
insert sequence
Length = 992
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 618 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 661
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full
insert sequence
Length = 1013
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 618 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 661
>gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013105, whole
genome shotgun sequence
Length = 17541
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 16324 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 16367
>gb|AACV01022074.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022074, whole
genome shotgun sequence
Length = 10854
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 1722 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 1781
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 1782 cgtcaaggccaa 1793
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 9156 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 9202
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 364 gccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 5863 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 5909
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
P0680A03
Length = 156054
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 146741 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 146698
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0033B09
Length = 143545
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 71891 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 71848
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer
protein (OSJNBa0015J15.11), mRNA
Length = 411
Score = 71.9 bits (36), Expect = 6e-010
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 340 ctgctgcccgctgctgtccgcg-tggccgacctcgacgccgcgctctgcctctgcaccac 398
||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||| |
Sbjct: 249 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 308
Query: 399 catcaaggccaa 410
| ||||||||||
Sbjct: 309 cgtcaaggccaa 320
>ref|NT_079872.2| Oryza sativa (japonica cultivar-group)
Length = 1124013
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 543218 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 543175
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 992
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 618 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 661
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 3345106 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 3345063
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 3345106 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 3345063
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 71.9 bits (36), Expect = 6e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 359 gcgtggccgacctcgacgccgcgctctgcctctgcaccaccatc 402
||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 3455187 gcgtggcggacctggacgccgcgctctgcctctgcaccaccatc 3455144
>gb|AU081583.1|AU081583 AU081583 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10135_2Z, mRNA sequence
Length = 471
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 366 cgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaa 410
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 24 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 68
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,813,173
Number of Sequences: 438736
Number of extensions: 1813173
Number of successful extensions: 44178
Number of sequences better than 0.5: 174
Number of HSP's better than 0.5 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41281
Number of HSP's gapped (non-prelim): 2773
length of query: 952
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 931
effective length of database: 2,791,206,460
effective search space: 2598613214260
effective search space used: 2598613214260
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)