BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748516.2.1
(1155 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF293831.1|CF293831 30DGS--03-C11.b1 Rice leaf plasmid c... 335 3e-089
gb|CV720797.1|CV720797 YBH--01-O04.b1 Rice before heading y... 335 3e-089
dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA... 335 3e-089
ref|NM_197700.1| Oryza sativa (japonica cultivar-group) bet... 335 3e-089
gb|CF328550.1|CF328550 NACL--03-I06.b1 Rice callus plasmid ... 319 2e-084
gb|CF276870.1|CF276870 14ETL--02-D03.b1 Rice etiolated leaf... 307 7e-081
gb|CF311548.1|CF311548 ABF--06-M21.g1 ABF3-overexpressing t... 307 7e-081
gb|CF333825.1|CF333825 JMT--02-N24.b1 AtJMT-overexpressing ... 307 7e-081
gb|CF277133.1|CF277133 14ETL--02-I21.b1 Rice etiolated leaf... 301 4e-079
gb|CF311056.1|CF311056 ABF--06-C03.b1 ABF3-overexpressing t... 299 2e-078
gb|CF326079.1|CF326079 JMT1--05-A19.g1 AtJMT-overexpressing... 272 4e-070
dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA... 210 1e-051
dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA... 210 1e-051
dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA... 210 1e-051
dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA... 210 1e-051
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 210 1e-051
gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) c... 210 1e-051
ref|NM_197698.1| Oryza sativa (japonica cultivar-group) bet... 210 1e-051
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 210 1e-051
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 210 1e-051
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 210 1e-051
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 210 1e-051
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 210 1e-051
dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA... 202 3e-049
gb|C19781.1|C19781 C19781 Rice panicle at ripening stage Or... 188 5e-045
gb|D48730.1|D48730 RICS15119A Rice green shoot Oryza sativa... 186 2e-044
gb|AU198282.1|AU198282 AU198282 Rice green shoot Oryza sati... 186 2e-044
dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA... 186 2e-044
dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA... 186 2e-044
dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA... 186 2e-044
ref|NM_197699.1| Oryza sativa (japonica cultivar-group) bet... 186 2e-044
gb|C73067.1|C73067 C73067 Rice panicle at flowering stage O... 184 7e-044
gb|AU184759.1|AU184759 AU184759 Rice root Oryza sativa (jap... 184 7e-044
gb|C28558.1|C28558 C28558 Rice callus cDNA Oryza sativa (ja... 182 3e-043
gb|AU062937.1|AU062937 AU062937 Rice callus Oryza sativa (j... 182 3e-043
gb|CF332237.1|CF332237 NACL--08-K17.g1 Rice callus plasmid ... 182 3e-043
gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature lea... 178 4e-042
gb|AU068468.1|AU068468 AU068468 Rice callus Oryza sativa (j... 174 7e-041
gb|CD670675.1|CD670675 OsMR090 5MT resistant rice mutant cD... 174 7e-041
gb|D39004.1|D39004 RICR0481A Rice root Oryza sativa (japoni... 170 1e-039
gb|C72255.1|C72255 C72255 Rice panicle at flowering stage O... 167 2e-038
gb|D47446.1|D47446 RICS12935A Rice green shoot Oryza sativa... 161 1e-036
gb|D47570.1|D47570 RICS13152A Rice green shoot Oryza sativa... 159 4e-036
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 157 2e-035
gb|AU181572.1|AU181572 AU181572 Rice callus (2001) Oryza sa... 153 3e-034
gb|AU225439.1|AU225439 AU225439 Oryza sativa Koshihikari pi... 153 3e-034
dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA... 153 3e-034
dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA... 153 3e-034
dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA... 153 3e-034
dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA... 153 3e-034
dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA... 153 3e-034
ref|NM_197701.1| Oryza sativa (japonica cultivar-group) bet... 153 3e-034
gb|D40182.1|D40182 RICS1969A Rice shoot Oryza sativa (japon... 151 1e-033
gb|D24261.1|D24261 RICR1604A Rice root Oryza sativa (japoni... 143 2e-031
gb|CZ552388.1|CZ552388 M0002054 AS_TRIM_TDNA_B1 Oryza sativ... 137 2e-029
gb|D39144.1|D39144 RICR2519A Rice root Oryza sativa (japoni... 133 2e-028
dbj|AP003875.3| Oryza sativa (japonica cultivar-group) geno... 127 1e-026
gb|AACV01017536.1| Oryza sativa (japonica cultivar-group) c... 127 1e-026
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 127 1e-026
gb|CH401229.1| Oryza sativa (japonica cultivar-group) chrom... 127 1e-026
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 127 1e-026
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 127 1e-026
gb|AU165471.1|AU165471 AU165471 Rice panicle at flowering s... 125 6e-026
dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA... 125 6e-026
gb|AU065701.1|AU065701 AU065701 Rice cDNA from immature lea... 123 2e-025
gb|AU091742.1|AU091742 AU091742 Rice callus Oryza sativa (j... 121 9e-025
gb|AU163612.1|AU163612 AU163612 Rice panicle at flowering s... 117 1e-023
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 117 1e-023
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 117 1e-023
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 117 1e-023
gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) c... 117 1e-023
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 117 1e-023
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 117 1e-023
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 117 1e-023
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 117 1e-023
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 117 1e-023
gb|AQ794914.1|AQ794914 nbxb0054A04f CUGI Rice BAC Library O... 113 2e-022
gb|CD670632.1|CD670632 OsMR047 5MT resistant rice mutant cD... 109 3e-021
gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (ja... 103 2e-019
gb|AU184077.1|AU184077 AU184077 Rice root Oryza sativa (jap... 103 2e-019
dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-019
gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) c... 103 2e-019
gb|AU093542.1|AU093542 AU093542 Rice callus Oryza sativa (j... 101 8e-019
gb|D39101.1|D39101 RICR1965A Rice root Oryza sativa (japoni... 96 5e-017
gb|D39864.1|D39864 RICS1504A Rice shoot Oryza sativa (japon... 92 8e-016
gb|AU077523.1|AU077523 AU077523 Rice callus Oryza sativa (j... 92 8e-016
gb|C20417.1|C20417 C20417 Rice panicle at ripening stage Or... 90 3e-015
gb|C98131.1|C98131 C98131 Rice callus Oryza sativa (japonic... 90 3e-015
gb|AU093543.1|AU093543 AU093543 Rice callus Oryza sativa (j... 90 3e-015
gb|AU094597.1|AU094597 AU094597 Rice panicle at ripening st... 90 3e-015
gb|AU163569.1|AU163569 AU163569 Rice panicle at flowering s... 90 3e-015
gb|AU225903.1|AU225903 AU225903 Oryza sativa Koshihikari pi... 90 3e-015
gb|CV722636.1|CV722636 root--01-B24.g1 Rice root lambda pha... 90 3e-015
gb|D39925.1|D39925 RICS1590A Rice shoot Oryza sativa (japon... 88 1e-014
gb|AU108787.1|AU108787 AU108787 Rice callus Oryza sativa (j... 84 2e-013
gb|AU166079.1|AU166079 AU166079 Rice panicle shorter than 3... 84 2e-013
gb|D46769.1|D46769 RICS11648A Rice green shoot Oryza sativa... 80 3e-012
gb|C72059.1|C72059 C72059 Rice panicle at flowering stage O... 80 3e-012
gb|C72914.1|C72914 C72914 Rice panicle at flowering stage O... 80 3e-012
gb|AU063919.1|AU063919 AU063919 Rice panicle at flowering s... 80 3e-012
gb|AU063925.1|AU063925 AU063925 Rice panicle at flowering s... 80 3e-012
gb|AU063981.1|AU063981 AU063981 Rice panicle at flowering s... 80 3e-012
gb|AU161321.1|AU161321 AU161321 Rice callus Oryza sativa (j... 80 3e-012
gb|AU093947.2|AU093947 AU093947 Rice panicle at flowering s... 80 3e-012
gb|BP184832.1|BP184832 BP184832 pNS rice panicle cDNA, flow... 80 3e-012
dbj|AK072792.1| Oryza sativa (japonica cultivar-group) cDNA... 80 3e-012
gb|AC107224.2| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|AACV01005739.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
gb|AACV01005740.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
ref|NM_187639.1| Oryza sativa (japonica cultivar-group), p... 80 3e-012
ref|NM_187641.1| Oryza sativa (japonica cultivar-group), p... 80 3e-012
ref|NM_187643.1| Oryza sativa (japonica cultivar-group), p... 80 3e-012
gb|CF333826.1|CF333826 JMT--02-N24.g1 AtJMT-overexpressing ... 78 1e-011
gb|C72448.1|C72448 C72448 Rice panicle at flowering stage O... 74 2e-010
gb|C72568.1|C72568 C72568 Rice panicle at flowering stage O... 74 2e-010
gb|C96991.1|C96991 C96991 Rice callus Oryza sativa (japonic... 74 2e-010
gb|D40180.1|D40180 RICS1967A Rice shoot Oryza sativa (japon... 72 7e-010
gb|AU094457.1|AU094457 AU094457 Rice panicle at ripening st... 72 7e-010
gb|AACV01005737.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
gb|D39965.1|D39965 RICS1661A Rice shoot Oryza sativa (japon... 70 3e-009
gb|C98677.1|C98677 C98677 Rice panicle at flowering stage O... 70 3e-009
gb|AU173230.1|AU173230 AU173230 Rice root Oryza sativa (jap... 70 3e-009
gb|AU184180.1|AU184180 AU184180 Rice root Oryza sativa (jap... 70 3e-009
gb|C96739.1|C96739 C96739 Rice callus Oryza sativa (japonic... 66 5e-008
gb|AU165472.1|AU165472 AU165472 Rice panicle at flowering s... 66 5e-008
gb|AU163761.1|AU163761 AU163761 Rice panicle at ripening st... 64 2e-007
gb|AU184078.1|AU184078 AU184078 Rice root Oryza sativa (jap... 62 7e-007
gb|AACV01010248.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
ref|XM_473433.1| Oryza sativa (japonica cultivar-group), p... 62 7e-007
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 62 7e-007
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromoso... 62 7e-007
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|C72628.1|C72628 C72628 Rice panicle at flowering stage O... 60 3e-006
gb|C93658.1|C93658 C93658 Rice panicle at flowering stage O... 60 3e-006
gb|C98558.1|C98558 C98558 Rice panicle at flowering stage O... 60 3e-006
gb|AU063778.1|AU063778 AU063778 Rice panicle at flowering s... 60 3e-006
gb|AU068467.1|AU068467 AU068467 Rice callus Oryza sativa (j... 60 3e-006
gb|AU069701.1|AU069701 AU069701 Rice panicle at flowering s... 60 3e-006
gb|AU069778.1|AU069778 AU069778 Rice panicle at flowering s... 60 3e-006
gb|AU163433.1|AU163433 AU163433 Rice panicle at flowering s... 60 3e-006
gb|AU163583.1|AU163583 AU163583 Rice panicle at flowering s... 60 3e-006
gb|AU165452.1|AU165452 AU165452 Rice panicle at flowering s... 60 3e-006
gb|AU165487.1|AU165487 AU165487 Rice panicle at flowering s... 60 3e-006
gb|AU165516.1|AU165516 AU165516 Rice panicle at flowering s... 60 3e-006
gb|AU165567.1|AU165567 AU165567 Rice panicle at flowering s... 60 3e-006
dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15... 60 3e-006
gb|AACV01022050.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|NM_197637.1| Oryza sativa (japonica cultivar-group) bet... 60 3e-006
gb|AU029750.1|AU029750 AU029750 Rice panicle shorter than 3... 58 1e-005
gb|C72838.1|C72838 C72838 Rice panicle at flowering stage O... 56 4e-005
gb|AU162185.1|AU162185 AU162185 Rice panicle at flowering s... 56 4e-005
gb|D39077.1|D39077 RICR1787A Rice root Oryza sativa (japoni... 54 2e-004
gb|C71918.1|C71918 C71918 Rice panicle at flowering stage O... 54 2e-004
gb|AU069738.1|AU069738 AU069738 Rice panicle at flowering s... 54 2e-004
gb|AU070620.1|AU070620 AU070620 Rice shoot Oryza sativa (ja... 54 2e-004
gb|AU091886.1|AU091886 AU091886 Rice panicle at flowering s... 54 2e-004
gb|AU162920.1|AU162920 AU162920 Rice green shoot Oryza sati... 54 2e-004
gb|AU163608.1|AU163608 AU163608 Rice panicle at flowering s... 54 2e-004
dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AP005289.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01011389.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AC119290.2| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP005072.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|C19751.1|C19751 C19751 Rice panicle at ripening stage Or... 52 7e-004
gb|C73163.1|C73163 C73163 Rice panicle at flowering stage O... 52 7e-004
gb|AU069737.1|AU069737 AU069737 Rice panicle at flowering s... 52 7e-004
gb|AU182569.1|AU182569 AU182569 Rice panicle at flowering s... 52 7e-004
gb|CD670606.1|CD670606 OsMR021 5MT resistant rice mutant cD... 52 7e-004
dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
gb|C71943.1|C71943 C71943 Rice panicle at flowering stage O... 50 0.003
gb|C72196.1|C72196 C72196 Rice panicle at flowering stage O... 50 0.003
gb|C72276.1|C72276 C72276 Rice panicle at flowering stage O... 50 0.003
gb|C72523.1|C72523 C72523 Rice panicle at flowering stage O... 50 0.003
gb|C72950.1|C72950 C72950 Rice panicle at flowering stage O... 50 0.003
gb|C93663.1|C93663 C93663 Rice panicle at flowering stage O... 50 0.003
gb|AU069745.1|AU069745 AU069745 Rice panicle at flowering s... 50 0.003
gb|AU069748.1|AU069748 AU069748 Rice panicle at flowering s... 50 0.003
gb|AU069749.1|AU069749 AU069749 Rice panicle at flowering s... 50 0.003
gb|AU091897.1|AU091897 AU091897 Rice panicle at flowering s... 50 0.003
gb|AU165329.1|AU165329 AU165329 Rice panicle at flowering s... 50 0.003
dbj|AK069853.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AACV01005738.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NM_187642.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
gb|D39058.1|D39058 RICR1486A Rice root Oryza sativa (japoni... 48 0.011
gb|AU030830.1|AU030830 AU030830 Rice cDNA from immature lea... 48 0.011
gb|AU166877.1|AU166877 AU166877 Rice callus (2001) Oryza sa... 48 0.011
gb|CA754736.1|CA754736 BR030005001_BR030_F01_6_011.ab1 OA O... 48 0.011
gb|CA998319.1|CA998319 S345B_D06 Rice cold stress germinati... 48 0.011
gb|AU094059.1|AU094059 AU094059 Rice panicle at flowering s... 46 0.042
gb|AU163434.1|AU163434 AU163434 Rice panicle at flowering s... 46 0.042
gb|AU165517.1|AU165517 AU165517 Rice panicle at flowering s... 46 0.042
gb|C98492.1|C98492 C98492 Rice panicle at flowering stage O... 44 0.17
gb|C98824.1|C98824 C98824 Rice panicle at flowering stage O... 44 0.17
gb|AU093769.1|AU093769 AU093769 Rice panicle at flowering s... 44 0.17
gb|AU093795.1|AU093795 AU093795 Rice panicle at flowering s... 44 0.17
gb|AU093825.1|AU093825 AU093825 Rice panicle at flowering s... 44 0.17
gb|AU096413.1|AU096413 AU096413 Rice green shoot Oryza sati... 44 0.17
gb|AU163584.1|AU163584 AU163584 Rice panicle at flowering s... 44 0.17
gb|AU165453.1|AU165453 AU165453 Rice panicle at flowering s... 44 0.17
gb|AU165536.1|AU165536 AU165536 Rice panicle at flowering s... 44 0.17
gb|AU182308.1|AU182308 AU182308 Rice panicle at flowering s... 44 0.17
gb|AU182416.1|AU182416 AU182416 Rice panicle at flowering s... 44 0.17
>gb|CF293831.1|CF293831 30DGS--03-C11.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-C11, mRNA sequence
Length = 632
Score = 335 bits (169), Expect = 3e-089
Identities = 323/372 (86%), Gaps = 8/372 (2%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
||||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||| |
Sbjct: 606 gggaagttgcacggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctgg 547
Query: 603 tcgttcaggccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggta 661
|||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 546 tcgttctg-ccccggcttggccatggcgccgaacgccgtgccgctcaggtcgaagtggta 488
Query: 662 cttggccaccgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagca 721
||||| || ||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 487 cttggaaacggggtagtagttcatgtcggtgatgatcaccgtctccgggttgccggagca 428
Query: 722 ggccgggtggttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtc 781
||| ||||||||| | ||| | |||||||||||||||||| || ||||| |||||
Sbjct: 427 ggcagggtggttg------acgcatcttatctggtagcatgagccacagcccttcccgtc 374
Query: 782 cttgaagatgggctcgttgccacaggacgtcatggacgagaacgggtactggttggtgcc 841
||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 373 cttgaagataggctcgttgccgcaggaggtcatcgacgagaacgggtactggttggtgtt 314
Query: 842 cttgaacccgcacgcaccaccgttgtcgacggggccggcgccggtgggggcgccgtacca 901
|||||||||||| ||||| || | |||| | ||||||||||||||||| |||||||||||
Sbjct: 313 cttgaacccgcaagcaccgccatcgtcgtcagggccggcgccggtgggagcgccgtacca 254
Query: 902 ggtggccttggc 913
||||||| ||||
Sbjct: 253 ggtggccctggc 242
>gb|CV720797.1|CV720797 YBH--01-O04.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--01-O04, mRNA sequence
Length = 453
Score = 335 bits (169), Expect = 3e-089
Identities = 323/372 (86%), Gaps = 8/372 (2%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
||||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||| |
Sbjct: 422 gggaagttgcacggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctgg 363
Query: 603 tcgttcaggccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggta 661
|||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 362 tcgttctg-ccccggcttggccatggcgccgaacgccgtgccgctcaggtcgaagtggta 304
Query: 662 cttggccaccgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagca 721
||||| || ||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 303 cttggaaacggggtagtagttcatgtcggtgatgatcaccgtctccgggttgccggagca 244
Query: 722 ggccgggtggttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtc 781
||| ||||||||| | ||| | |||||||||||||||||| || ||||| |||||
Sbjct: 243 ggcagggtggttg------acgcatcttatctggtagcatgagccacagcccttcccgtc 190
Query: 782 cttgaagatgggctcgttgccacaggacgtcatggacgagaacgggtactggttggtgcc 841
||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 189 cttgaagataggctcgttgccgcaggaggtcatcgacgagaacgggtactggttggtgtt 130
Query: 842 cttgaacccgcacgcaccaccgttgtcgacggggccggcgccggtgggggcgccgtacca 901
|||||||||||| ||||| || | |||| | ||||||||||||||||| |||||||||||
Sbjct: 129 cttgaacccgcaagcaccgccatcgtcgtcagggccggcgccggtgggagcgccgtacca 70
Query: 902 ggtggccttggc 913
||||||| ||||
Sbjct: 69 ggtggccctggc 58
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full
insert sequence
Length = 1313
Score = 335 bits (169), Expect = 3e-089
Identities = 323/372 (86%), Gaps = 8/372 (2%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
||||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||| |
Sbjct: 605 gggaagttgcacggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctgg 546
Query: 603 tcgttcaggccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggta 661
|||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 545 tcgttctg-ccccggcttggccatggcgccgaacgccgtgccgctcaggtcgaagtggta 487
Query: 662 cttggccaccgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagca 721
||||| || ||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 486 cttggaaacggggtagtagttcatgtcggtgatgatcaccgtctccgggttgccggagca 427
Query: 722 ggccgggtggttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtc 781
||| ||||||||| | ||| | |||||||||||||||||| || ||||| |||||
Sbjct: 426 ggcagggtggttg------acgcatcttatctggtagcatgagccacagcccttcccgtc 373
Query: 782 cttgaagatgggctcgttgccacaggacgtcatggacgagaacgggtactggttggtgcc 841
||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 372 cttgaagataggctcgttgccgcaggaggtcatcgacgagaacgggtactggttggtgtt 313
Query: 842 cttgaacccgcacgcaccaccgttgtcgacggggccggcgccggtgggggcgccgtacca 901
|||||||||||| ||||| || | |||| | ||||||||||||||||| |||||||||||
Sbjct: 312 cttgaacccgcaagcaccgccatcgtcgtcagggccggcgccggtgggagcgccgtacca 253
Query: 902 ggtggccttggc 913
||||||| ||||
Sbjct: 252 ggtggccctggc 241
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 868 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 809
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 808 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 749
Query: 400 cgtgcat 406
|| ||||
Sbjct: 748 cgcgcat 742
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3
(OSJNBb0014I11.1), mRNA
Length = 904
Score = 335 bits (169), Expect = 3e-089
Identities = 323/372 (86%), Gaps = 8/372 (2%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
||||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||| |
Sbjct: 594 gggaagttgcacggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctgg 535
Query: 603 tcgttcaggccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggta 661
|||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 534 tcgttctg-ccccggcttggccatggcgccgaacgccgtgccgctcaggtcgaagtggta 476
Query: 662 cttggccaccgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagca 721
||||| || ||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 475 cttggaaacggggtagtagttcatgtcggtgatgatcaccgtctccgggttgccggagca 416
Query: 722 ggccgggtggttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtc 781
||| ||||||||| | ||| | |||||||||||||||||| || ||||| |||||
Sbjct: 415 ggcagggtggttg------acgcatcttatctggtagcatgagccacagcccttcccgtc 362
Query: 782 cttgaagatgggctcgttgccacaggacgtcatggacgagaacgggtactggttggtgcc 841
||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 361 cttgaagataggctcgttgccgcaggaggtcatcgacgagaacgggtactggttggtgtt 302
Query: 842 cttgaacccgcacgcaccaccgttgtcgacggggccggcgccggtgggggcgccgtacca 901
|||||||||||| ||||| || | |||| | ||||||||||||||||| |||||||||||
Sbjct: 301 cttgaacccgcaagcaccgccatcgtcgtcagggccggcgccggtgggagcgccgtacca 242
Query: 902 ggtggccttggc 913
||||||| ||||
Sbjct: 241 ggtggccctggc 230
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 857 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 798
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 797 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 738
Query: 400 cgtgcat 406
|| ||||
Sbjct: 737 cgcgcat 731
>gb|CF328550.1|CF328550 NACL--03-I06.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--03-I06, mRNA sequence
Length = 632
Score = 319 bits (161), Expect = 2e-084
Identities = 321/372 (86%), Gaps = 8/372 (2%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
|||||| |||||||||||| | ||||||| ||||||||||| |||||||| ||||||| |
Sbjct: 605 gggaagctgcacggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctgg 546
Query: 603 tcgttcaggccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggta 661
|||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 545 tcgttctg-ccccggcttggccatggcgccgaacgccgtgccgctcaggtcgaagtggta 487
Query: 662 cttggccaccgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagca 721
||||| || ||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 486 cttggaaacggggtagtagttcatgtcggtgatgatcaccgtctccgggttgccggagca 427
Query: 722 ggccgggtggttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtc 781
||| ||||||||| | ||| | |||||||||||||||||| || ||||| |||||
Sbjct: 426 ggcagggtggttg------acgcatcttatctggtagcatgagccacagcccttcccgtc 373
Query: 782 cttgaagatgggctcgttgccacaggacgtcatggacgagaacgggtactggttggtgcc 841
||||||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||||
Sbjct: 372 cttgaagataggctcgttgccgcaggaggtcatcgacgagaaagggtactggttggtgtt 313
Query: 842 cttgaacccgcacgcaccaccgttgtcgacggggccggcgccggtgggggcgccgtacca 901
|||||||||||| ||||| || | |||| | ||||||||||||||||| |||||||||||
Sbjct: 312 cttgaacccgcaagcaccgccatcgtcgtcagggccggcgccggtgggagcgccgtacca 253
Query: 902 ggtggccttggc 913
||||||| ||||
Sbjct: 252 ggtggccctggc 241
>gb|CF276870.1|CF276870 14ETL--02-D03.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-D03, mRNA sequence
Length = 581
Score = 307 bits (155), Expect = 7e-081
Identities = 303/350 (86%), Gaps = 8/350 (2%)
Strand = Plus / Minus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 581 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 523
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 522 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 463
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttgctcttcagg 743
||||| |||||||||||||||| | |||||||||||| ||||||||| | |
Sbjct: 462 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg------acg 409
Query: 744 caccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcca 803
|| | |||||||||||||||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 408 catcttatctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccg 349
Query: 804 caggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccg 863
||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||| ||
Sbjct: 348 caggaggtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgcca 289
Query: 864 ttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
| |||| | ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 288 tcgtcgtcagggccggcgccggtgggagcgccgtaccaggtggccctggc 239
>gb|CF311548.1|CF311548 ABF--06-M21.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-M21, mRNA sequence
Length = 583
Score = 307 bits (155), Expect = 7e-081
Identities = 303/350 (86%), Gaps = 8/350 (2%)
Strand = Plus / Minus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 583 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 525
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 524 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 465
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttgctcttcagg 743
||||| |||||||||||||||| | |||||||||||| ||||||||| | |
Sbjct: 464 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg------acg 411
Query: 744 caccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcca 803
|| | |||||||||||||||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 410 catcttatctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccg 351
Query: 804 caggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccg 863
||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||| ||
Sbjct: 350 caggaggtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgcca 291
Query: 864 ttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
| |||| | ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 290 tcgtcgtcagggccggcgccggtgggagcgccgtaccaggtggccctggc 241
>gb|CF333825.1|CF333825 JMT--02-N24.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-N24, mRNA sequence
Length = 577
Score = 307 bits (155), Expect = 7e-081
Identities = 303/350 (86%), Gaps = 8/350 (2%)
Strand = Plus / Minus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 577 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 519
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 518 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 459
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttgctcttcagg 743
||||| |||||||||||||||| | |||||||||||| ||||||||| | |
Sbjct: 458 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg------acg 405
Query: 744 caccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcca 803
|| | |||||||||||||||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 404 catcttatctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccg 345
Query: 804 caggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccg 863
||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||| ||
Sbjct: 344 caggaggtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgcca 285
Query: 864 ttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
| |||| | ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 284 tcgtcgtcagggccggcgccggtgggagcgccgtaccaggtggccctggc 235
>gb|CF277133.1|CF277133 14ETL--02-I21.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-I21, mRNA sequence
Length = 602
Score = 301 bits (152), Expect = 4e-079
Identities = 300/347 (86%), Gaps = 8/347 (2%)
Strand = Plus / Minus
Query: 568 actgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggccatg 626
|||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| |||||||
Sbjct: 602 actggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggccatg 544
Query: 627 gacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatg 686
| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 543 gcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttcatg 484
Query: 687 tccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttgctcttcaggcac 746
|| |||||||||||||||| | |||||||||||| ||||||||| | |||
Sbjct: 483 tcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg------acgcat 430
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
| |||||||||||||||||| || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 429 cttatctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcag 370
Query: 807 gacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttg 866
|| ||||| |||||||||||||||||||||||| |||||||||||| ||||| || | |
Sbjct: 369 gaggtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgccatcg 310
Query: 867 tcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
||| | ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 309 tcgtcagggccggcgccggtgggagcgccgtaccaggtggccctggc 263
>gb|CF311056.1|CF311056 ABF--06-C03.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-C03, mRNA sequence
Length = 585
Score = 299 bits (151), Expect = 2e-078
Identities = 302/350 (86%), Gaps = 8/350 (2%)
Strand = Plus / Minus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 583 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 525
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 524 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 465
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttgctcttcagg 743
||||| |||||||||||||||| | |||||||||||| ||||||||| |
Sbjct: 464 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg------aca 411
Query: 744 caccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcca 803
|| | |||||||||||||||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 410 catcttatctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccg 351
Query: 804 caggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccg 863
||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||| ||
Sbjct: 350 caggaggtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgcca 291
Query: 864 ttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
| |||| | ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 290 tcgtcgtcagggccggcgccggtgggagcgccgtaccaggtggccctggc 241
>gb|CF326079.1|CF326079 JMT1--05-A19.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-A19, mRNA sequence
Length = 518
Score = 272 bits (137), Expect = 4e-070
Identities = 247/284 (86%), Gaps = 6/284 (2%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 511 ccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttcatgtcg 452
Query: 690 gtgatgatcaccgtctgagccacgccggagcaggccgggtggttgctcttcaggcaccgt 749
|||||||||||||||| | |||||||||||| ||||||||| | ||| | |
Sbjct: 451 gtgatgatcaccgtctccgggttgccggagcaggcagggtggttg------acgcatctt 398
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
||||||||||||||||| || ||||| |||||||||||||| ||||||||||| |||||
Sbjct: 397 atctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggag 338
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| |||||||||||||||||||||||| |||||||||||| ||||| || | ||||
Sbjct: 337 gtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgccatcgtcg 278
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
| ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 277 tcagggccggcgccggtgggagcgccgtaccaggtggccctggc 234
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full
insert sequence
Length = 1259
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Minus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 710 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 651
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 650 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 591
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 590 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 532
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 531 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 472
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 471 atgtcggtgatgatcaccgtct 450
Score = 182 bits (92), Expect = 3e-043
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 411 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 352
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 351 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 292
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 291 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 236
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 1187 agtgacagtgggcgggagagcaca 1164
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full
insert sequence
Length = 1263
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Minus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 716 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 657
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 656 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 597
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 596 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 538
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 537 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 478
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 477 atgtcggtgatgatcaccgtct 456
Score = 174 bits (88), Expect = 7e-041
Identities = 154/176 (87%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 417 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 358
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| || |||||||| | |||||||||||| || || |||||||||
Sbjct: 357 gtcatggacgagaatggttactggttcacgttcttgaacccgcaagcgccgccgttgtcg 298
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 297 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 242
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 1191 agtgacagtgggcgggagagcaca 1168
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full
insert sequence
Length = 1257
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Minus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 710 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 651
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 650 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 591
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 590 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 532
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 531 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 472
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 471 atgtcggtgatgatcaccgtct 450
Score = 182 bits (92), Expect = 3e-043
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 411 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 352
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 351 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 292
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 291 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 236
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 1185 agtgacagtgggcgggagagcaca 1162
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full
insert sequence
Length = 1257
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Minus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 710 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 651
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 650 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 591
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 590 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 532
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 531 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 472
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 471 atgtcggtgatgatcaccgtct 450
Score = 182 bits (92), Expect = 3e-043
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 411 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 352
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 351 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 292
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 291 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 236
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 1185 agtgacagtgggcgggagagcaca 1162
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
sequence
Length = 135510
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Minus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 22831 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 22772
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 22771 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 22712
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 22711 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 22653
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 22652 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 22593
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 22592 atgtcggtgatgatcaccgtct 22571
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 16866 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 16807
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 16806 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 16747
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 16746 ggggtagtagttcatgtccgtgatgatcaccgtc 16713
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Minus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 4634 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 4576
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 4575 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 4516
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 4515 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 4465
Score = 137 bits (69), Expect = 2e-029
Identities = 84/89 (94%)
Strand = Plus / Minus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 22363 cgtacctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcag 22304
Query: 807 gacgtcatggacgagaacgggtactggtt 835
|| |||||||||||||| |||||||||||
Sbjct: 22303 gaggtcatggacgagaatgggtactggtt 22275
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Minus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 4317 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 4258
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 4257 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 4210
Score = 103 bits (52), Expect = 2e-019
Identities = 94/108 (87%)
Strand = Plus / Minus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| | ||| || ||||||||||||| ||| | ||||||||||| ||||| ||
Sbjct: 16315 ctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgccgcaggaggt 16256
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 16255 catggacatgaacgggtactggttggtgttcttgaacccgcacgcacc 16208
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 5264 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 5205
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 5204 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 5145
Query: 400 cgtgcat 406
|| ||||
Sbjct: 5144 cgcgcat 5138
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 16104 caccgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccggga 16045
Query: 919 gccag 923
|||||
Sbjct: 16044 gccag 16040
Score = 65.9 bits (33), Expect = 5e-008
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 873 gggccggcgccggtgggggcgccgtaccaggtggccttggc 913
||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 4093 gggccggcgccggtgggagcgccgtaccaggtggccctggc 4053
Score = 61.9 bits (31), Expect = 7e-007
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| || |
Sbjct: 22147 caccgttgtcgtcagggccggcgccggtgggagcgccataccaggttgcccgggcaggga 22088
Query: 919 gccagcc 925
|||||||
Sbjct: 22087 gccagcc 22081
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 23306 agtgacagtgggcgggagagcaca 23283
>gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022091, whole
genome shotgun sequence
Length = 36005
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Minus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 22125 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 22066
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 22065 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 22006
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 22005 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 21947
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 21946 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 21887
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 21886 atgtcggtgatgatcaccgtct 21865
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 16160 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 16101
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 16100 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 16041
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 16040 ggggtagtagttcatgtccgtgatgatcaccgtc 16007
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Minus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 3928 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 3870
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 3869 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 3810
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 3809 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 3759
Score = 137 bits (69), Expect = 2e-029
Identities = 84/89 (94%)
Strand = Plus / Minus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 21657 cgtacctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcag 21598
Query: 807 gacgtcatggacgagaacgggtactggtt 835
|| |||||||||||||| |||||||||||
Sbjct: 21597 gaggtcatggacgagaatgggtactggtt 21569
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Minus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 3611 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 3552
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 3551 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 3504
Score = 103 bits (52), Expect = 2e-019
Identities = 94/108 (87%)
Strand = Plus / Minus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| | ||| || ||||||||||||| ||| | ||||||||||| ||||| ||
Sbjct: 15609 ctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgccgcaggaggt 15550
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 15549 catggacatgaacgggtactggttggtgttcttgaacccgcacgcacc 15502
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 4558 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 4499
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 4498 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 4439
Query: 400 cgtgcat 406
|| ||||
Sbjct: 4438 cgcgcat 4432
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 15398 caccgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccggga 15339
Query: 919 gccag 923
|||||
Sbjct: 15338 gccag 15334
Score = 61.9 bits (31), Expect = 7e-007
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| || |
Sbjct: 21441 caccgttgtcgtcagggccggcgccggtgggagcgccataccaggttgcccgggcaggga 21382
Query: 919 gccagcc 925
|||||||
Sbjct: 21381 gccagcc 21375
Score = 52.0 bits (26), Expect = 7e-004
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 873 gggccggcgccggtgggggcgc-cgtaccaggtggccttggc 913
||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 3387 gggccggcgccggtgggagcgctcgtaccaggtggccctggc 3346
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 22600 agtgacagtgggcgggagagcaca 22577
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6
(OSJNBb0014I11.3), mRNA
Length = 1240
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Minus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 697 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 638
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 637 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 578
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 577 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 519
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 518 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 459
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 458 atgtcggtgatgatcaccgtct 437
Score = 182 bits (92), Expect = 3e-043
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 398 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 339
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 338 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 279
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 278 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 223
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 1172 agtgacagtgggcgggagagcaca 1149
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 3233722 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 3233781
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 3233782 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 3233841
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 3233842 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 3233900
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 3233901 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 3233960
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 3233961 atgtcggtgatgatcaccgtct 3233982
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 3239687 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 3239746
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3239747 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 3239806
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 3239807 ggggtagtagttcatgtccgtgatgatcaccgtc 3239840
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 3251919 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 3251977
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 3251978 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 3252037
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 3252038 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 3252088
Score = 137 bits (69), Expect = 2e-029
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 3234190 cgtacctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcag 3234249
Query: 807 gacgtcatggacgagaacgggtactggtt 835
|| |||||||||||||| |||||||||||
Sbjct: 3234250 gaggtcatggacgagaatgggtactggtt 3234278
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 3252236 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 3252295
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 3252296 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 3252343
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 3262961 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 3262902
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 3262901 gtgatgatcaccgtct 3262886
Score = 103 bits (52), Expect = 2e-019
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| | ||| || ||||||||||||| ||| | ||||||||||| ||||| ||
Sbjct: 3240238 ctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgccgcaggaggt 3240297
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 3240298 catggacatgaacgggtactggttggtgttcttgaacccgcacgcacc 3240345
Score = 99.6 bits (50), Expect = 3e-018
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcat 814
|||||| |||||||| ||||||||||||||||| | |||| |||||| ||||| |||||
Sbjct: 3262593 gtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggaggtcat 3262534
Query: 815 ggacgagaacgggtactggttggtgcccttgaacccgcacgc 856
||| ||||||||||||||||||| |||||||||||||||
Sbjct: 3262533 cgacatgaacgggtactggttggtgtgcttgaacccgcacgc 3262492
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 3263907 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 3263848
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 3263847 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 3263788
Query: 400 c 400
|
Sbjct: 3263787 c 3263787
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 3251289 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 3251348
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 3251349 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 3251408
Query: 400 cgtgcat 406
|| ||||
Sbjct: 3251409 cgcgcat 3251415
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 3240449 caccgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccggga 3240508
Query: 919 gccag 923
|||||
Sbjct: 3240509 gccag 3240513
Score = 65.9 bits (33), Expect = 5e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 873 gggccggcgccggtgggggcgccgtaccaggtggccttggc 913
||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 3252460 gggccggcgccggtgggagcgccgtaccaggtggccctggc 3252500
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 860 accgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||| |||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 3262394 accgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggccctggcc 3262340
Score = 61.9 bits (31), Expect = 7e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| || |
Sbjct: 3234406 caccgttgtcgtcagggccggcgccggtgggagcgccataccaggttgcccgggcaggga 3234465
Query: 919 gccagcc 925
|||||||
Sbjct: 3234466 gccagcc 3234472
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacagga 808
||||||||||||||| ||| |||||||||||||||| || ||||||| |||||
Sbjct: 2868669 gtagcatgagccgcatcccctgccgtccttgaagattgggacgttgccgcagga 2868616
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 556 gcacccgcctgaactgcatgtcgatgatcccggc 589
|||||| ||||||||||||||||||||| |||||
Sbjct: 2869240 gcaccctcctgaactgcatgtcgatgatgccggc 2869207
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 3233247 agtgacagtgggcgggagagcaca 3233270
Score = 48.1 bits (24), Expect = 0.011
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 677 gtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||| |||||||
Sbjct: 2869119 gtagttcatgtccgtgatgaacaccgtc 2869092
Score = 44.1 bits (22), Expect = 0.17
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 316 tgccggactcgttggtgatgcgcatggagaaggg 349
||||||||||| |||||| ||| |||||||||||
Sbjct: 2869483 tgccggactcggtggtgacgcgaatggagaaggg 2869450
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 9286881 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 9286940
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 9286941 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 9287000
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 9287001 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 9287059
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 9287060 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 9287119
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 9287120 atgtcggtgatgatcaccgtct 9287141
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 9292846 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 9292905
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 9292906 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 9292965
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 9292966 ggggtagtagttcatgtccgtgatgatcaccgtc 9292999
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 9305078 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 9305136
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 9305137 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 9305196
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 9305197 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 9305247
Score = 137 bits (69), Expect = 2e-029
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 9287349 cgtacctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcag 9287408
Query: 807 gacgtcatggacgagaacgggtactggtt 835
|| |||||||||||||| |||||||||||
Sbjct: 9287409 gaggtcatggacgagaatgggtactggtt 9287437
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 9305395 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 9305454
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 9305455 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 9305502
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 9315836 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 9315777
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 9315776 gtgatgatcaccgtct 9315761
Score = 103 bits (52), Expect = 2e-019
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| | ||| || ||||||||||||| ||| | ||||||||||| ||||| ||
Sbjct: 9293397 ctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgccgcaggaggt 9293456
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 9293457 catggacatgaacgggtactggttggtgttcttgaacccgcacgcacc 9293504
Score = 99.6 bits (50), Expect = 3e-018
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcat 814
|||||| |||||||| ||||||||||||||||| | |||| |||||| ||||| |||||
Sbjct: 9315468 gtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggaggtcat 9315409
Query: 815 ggacgagaacgggtactggttggtgcccttgaacccgcacgc 856
||| ||||||||||||||||||| |||||||||||||||
Sbjct: 9315408 cgacatgaacgggtactggttggtgtgcttgaacccgcacgc 9315367
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 9316782 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 9316723
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 9316722 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 9316663
Query: 400 c 400
|
Sbjct: 9316662 c 9316662
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 9304448 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 9304507
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 9304508 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 9304567
Query: 400 cgtgcat 406
|| ||||
Sbjct: 9304568 cgcgcat 9304574
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 9293608 caccgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccggga 9293667
Query: 919 gccag 923
|||||
Sbjct: 9293668 gccag 9293672
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 860 accgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||| |||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 9315269 accgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggccctggcc 9315215
Score = 61.9 bits (31), Expect = 7e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| || |
Sbjct: 9287565 caccgttgtcgtcagggccggcgccggtgggagcgccataccaggttgcccgggcaggga 9287624
Query: 919 gccagcc 925
|||||||
Sbjct: 9287625 gccagcc 9287631
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacagga 808
||||||||||||||| ||| |||||||||||||||| || ||||||| |||||
Sbjct: 8898383 gtagcatgagccgcatcccctgccgtccttgaagattgggacgttgccgcagga 8898330
Score = 52.0 bits (26), Expect = 7e-004
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 873 gggccggcgccggtgggggcgc-cgtaccaggtggccttggc 913
||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 9305619 gggccggcgccggtgggagcgctcgtaccaggtggccctggc 9305660
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 556 gcacccgcctgaactgcatgtcgatgatcccggc 589
|||||| ||||||||||||||||||||| |||||
Sbjct: 8898954 gcaccctcctgaactgcatgtcgatgatgccggc 8898921
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 9286406 agtgacagtgggcgggagagcaca 9286429
Score = 48.1 bits (24), Expect = 0.011
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 677 gtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||| |||||||
Sbjct: 8898833 gtagttcatgtccgtgatgaacaccgtc 8898806
Score = 44.1 bits (22), Expect = 0.17
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 316 tgccggactcgttggtgatgcgcatggagaaggg 349
||||||||||| |||||| ||| |||||||||||
Sbjct: 8899197 tgccggactcggtggtgacgcgaatggagaaggg 8899164
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 20152675 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 20152734
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 20152735 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 20152794
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 20152795 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 20152853
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 20152854 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 20152913
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 20152914 atgtcggtgatgatcaccgtct 20152935
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 20158640 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 20158699
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 20158700 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 20158759
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 20158760 ggggtagtagttcatgtccgtgatgatcaccgtc 20158793
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 20170872 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 20170930
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 20170931 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 20170990
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 20170991 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 20171041
Score = 137 bits (69), Expect = 2e-029
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 20153143 cgtacctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcag 20153202
Query: 807 gacgtcatggacgagaacgggtactggtt 835
|| |||||||||||||| |||||||||||
Sbjct: 20153203 gaggtcatggacgagaatgggtactggtt 20153231
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 20171189 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 20171248
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 20171249 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 20171296
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 20181630 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 20181571
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 20181570 gtgatgatcaccgtct 20181555
Score = 103 bits (52), Expect = 2e-019
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| | ||| || ||||||||||||| ||| | ||||||||||| ||||| ||
Sbjct: 20159191 ctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgccgcaggaggt 20159250
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 20159251 catggacatgaacgggtactggttggtgttcttgaacccgcacgcacc 20159298
Score = 99.6 bits (50), Expect = 3e-018
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcat 814
|||||| |||||||| ||||||||||||||||| | |||| |||||| ||||| |||||
Sbjct: 20181262 gtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggaggtcat 20181203
Query: 815 ggacgagaacgggtactggttggtgcccttgaacccgcacgc 856
||| ||||||||||||||||||| |||||||||||||||
Sbjct: 20181202 cgacatgaacgggtactggttggtgtgcttgaacccgcacgc 20181161
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 20182576 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 20182517
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 20182516 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 20182457
Query: 400 c 400
|
Sbjct: 20182456 c 20182456
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 20170242 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 20170301
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 20170302 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 20170361
Query: 400 cgtgcat 406
|| ||||
Sbjct: 20170362 cgcgcat 20170368
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 20159402 caccgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccggga 20159461
Query: 919 gccag 923
|||||
Sbjct: 20159462 gccag 20159466
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 860 accgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||| |||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 20181063 accgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggccctggcc 20181009
Score = 61.9 bits (31), Expect = 7e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| || |
Sbjct: 20153359 caccgttgtcgtcagggccggcgccggtgggagcgccataccaggttgcccgggcaggga 20153418
Query: 919 gccagcc 925
|||||||
Sbjct: 20153419 gccagcc 20153425
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacagga 808
||||||||||||||| ||| |||||||||||||||| || ||||||| |||||
Sbjct: 19764177 gtagcatgagccgcatcccctgccgtccttgaagattgggacgttgccgcagga 19764124
Score = 52.0 bits (26), Expect = 7e-004
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 873 gggccggcgccggtgggggcgc-cgtaccaggtggccttggc 913
||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 20171413 gggccggcgccggtgggagcgctcgtaccaggtggccctggc 20171454
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 556 gcacccgcctgaactgcatgtcgatgatcccggc 589
|||||| ||||||||||||||||||||| |||||
Sbjct: 19764748 gcaccctcctgaactgcatgtcgatgatgccggc 19764715
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 20152200 agtgacagtgggcgggagagcaca 20152223
Score = 48.1 bits (24), Expect = 0.011
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 677 gtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||| |||||||
Sbjct: 19764627 gtagttcatgtccgtgatgaacaccgtc 19764600
Score = 44.1 bits (22), Expect = 0.17
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 316 tgccggactcgttggtgatgcgcatggagaaggg 349
||||||||||| |||||| ||| |||||||||||
Sbjct: 19764991 tgccggactcggtggtgacgcgaatggagaaggg 19764958
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 21311528 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 21311587
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 21311588 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 21311647
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 21311648 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 21311706
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 21311707 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 21311766
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 21311767 atgtcggtgatgatcaccgtct 21311788
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 21317493 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 21317552
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21317553 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 21317612
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 21317613 ggggtagtagttcatgtccgtgatgatcaccgtc 21317646
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 21329725 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 21329783
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 21329784 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 21329843
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 21329844 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 21329894
Score = 137 bits (69), Expect = 2e-029
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 21311996 cgtacctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcag 21312055
Query: 807 gacgtcatggacgagaacgggtactggtt 835
|| |||||||||||||| |||||||||||
Sbjct: 21312056 gaggtcatggacgagaatgggtactggtt 21312084
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 21330042 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 21330101
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 21330102 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 21330149
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 21340767 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 21340708
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 21340707 gtgatgatcaccgtct 21340692
Score = 103 bits (52), Expect = 2e-019
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| | ||| || ||||||||||||| ||| | ||||||||||| ||||| ||
Sbjct: 21318044 ctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgccgcaggaggt 21318103
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 21318104 catggacatgaacgggtactggttggtgttcttgaacccgcacgcacc 21318151
Score = 99.6 bits (50), Expect = 3e-018
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcat 814
|||||| |||||||| ||||||||||||||||| | |||| |||||| ||||| |||||
Sbjct: 21340399 gtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggaggtcat 21340340
Query: 815 ggacgagaacgggtactggttggtgcccttgaacccgcacgc 856
||| ||||||||||||||||||| |||||||||||||||
Sbjct: 21340339 cgacatgaacgggtactggttggtgtgcttgaacccgcacgc 21340298
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 21341713 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 21341654
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 21341653 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 21341594
Query: 400 c 400
|
Sbjct: 21341593 c 21341593
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 21329095 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 21329154
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 21329155 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 21329214
Query: 400 cgtgcat 406
|| ||||
Sbjct: 21329215 cgcgcat 21329221
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 21318255 caccgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccggga 21318314
Query: 919 gccag 923
|||||
Sbjct: 21318315 gccag 21318319
Score = 65.9 bits (33), Expect = 5e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 873 gggccggcgccggtgggggcgccgtaccaggtggccttggc 913
||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 21330266 gggccggcgccggtgggagcgccgtaccaggtggccctggc 21330306
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 860 accgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||| |||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 21340200 accgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggccctggcc 21340146
Score = 61.9 bits (31), Expect = 7e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| || |
Sbjct: 21312212 caccgttgtcgtcagggccggcgccggtgggagcgccataccaggttgcccgggcaggga 21312271
Query: 919 gccagcc 925
|||||||
Sbjct: 21312272 gccagcc 21312278
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacagga 808
||||||||||||||| ||| |||||||||||||||| || ||||||| |||||
Sbjct: 20946475 gtagcatgagccgcatcccctgccgtccttgaagattgggacgttgccgcagga 20946422
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 556 gcacccgcctgaactgcatgtcgatgatcccggc 589
|||||| ||||||||||||||||||||| |||||
Sbjct: 20947046 gcaccctcctgaactgcatgtcgatgatgccggc 20947013
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 21311053 agtgacagtgggcgggagagcaca 21311076
Score = 48.1 bits (24), Expect = 0.011
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 677 gtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||| |||||||
Sbjct: 20946925 gtagttcatgtccgtgatgaacaccgtc 20946898
Score = 44.1 bits (22), Expect = 0.17
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 316 tgccggactcgttggtgatgcgcatggagaaggg 349
||||||||||| |||||| ||| |||||||||||
Sbjct: 20947289 tgccggactcggtggtgacgcgaatggagaaggg 20947256
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 210 bits (106), Expect = 1e-051
Identities = 225/262 (85%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 445 cctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtacatggggt 504
||||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| ||||
Sbjct: 21322792 cctgcacgacgtcgccgtcgaggtcctcgtactcgacgagcacggcgaagtacaccgggt 21322851
Query: 505 tggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacccgcc 564
||||||| | || |||| ||||| |||| | ||||||||| ||||||| || || ||||
Sbjct: 21322852 tggagccctcctcgacgtggaagttgatcttgaggcccgggtagttgcaggggacgcgcc 21322911
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| ||||
Sbjct: 21322912 tgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggcc 21322970
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 21322971 atggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttc 21323030
Query: 684 atgtccgtgatgatcaccgtct 705
||||| ||||||||||||||||
Sbjct: 21323031 atgtcggtgatgatcaccgtct 21323052
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 21328757 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 21328816
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21328817 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 21328876
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 21328877 ggggtagtagttcatgtccgtgatgatcaccgtc 21328910
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 21340989 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 21341047
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 21341048 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 21341107
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 21341108 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 21341158
Score = 137 bits (69), Expect = 2e-029
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 21323260 cgtacctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcag 21323319
Query: 807 gacgtcatggacgagaacgggtactggtt 835
|| |||||||||||||| |||||||||||
Sbjct: 21323320 gaggtcatggacgagaatgggtactggtt 21323348
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 21341306 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 21341365
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 21341366 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 21341413
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 21352030 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 21351971
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 21351970 gtgatgatcaccgtct 21351955
Score = 103 bits (52), Expect = 2e-019
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| | ||| || ||||||||||||| ||| | ||||||||||| ||||| ||
Sbjct: 21329308 ctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgccgcaggaggt 21329367
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 21329368 catggacatgaacgggtactggttggtgttcttgaacccgcacgcacc 21329415
Score = 99.6 bits (50), Expect = 3e-018
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcat 814
|||||| |||||||| ||||||||||||||||| | |||| |||||| ||||| |||||
Sbjct: 21351662 gtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggaggtcat 21351603
Query: 815 ggacgagaacgggtactggttggtgcccttgaacccgcacgc 856
||| ||||||||||||||||||| |||||||||||||||
Sbjct: 21351602 cgacatgaacgggtactggttggtgtgcttgaacccgcacgc 21351561
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 21352976 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 21352917
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 21352916 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 21352857
Query: 400 c 400
|
Sbjct: 21352856 c 21352856
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 21340359 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 21340418
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 21340419 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 21340478
Query: 400 cgtgcat 406
|| ||||
Sbjct: 21340479 cgcgcat 21340485
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 21329519 caccgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccggga 21329578
Query: 919 gccag 923
|||||
Sbjct: 21329579 gccag 21329583
Score = 65.9 bits (33), Expect = 5e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 873 gggccggcgccggtgggggcgccgtaccaggtggccttggc 913
||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 21341530 gggccggcgccggtgggagcgccgtaccaggtggccctggc 21341570
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 860 accgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||| |||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 21351463 accgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggccctggcc 21351409
Score = 61.9 bits (31), Expect = 7e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 859 caccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggca 918
||||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| || |
Sbjct: 21323476 caccgttgtcgtcagggccggcgccggtgggagcgccataccaggttgcccgggcaggga 21323535
Query: 919 gccagcc 925
|||||||
Sbjct: 21323536 gccagcc 21323542
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacagga 808
||||||||||||||| ||| |||||||||||||||| || ||||||| |||||
Sbjct: 20957739 gtagcatgagccgcatcccctgccgtccttgaagattgggacgttgccgcagga 20957686
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 556 gcacccgcctgaactgcatgtcgatgatcccggc 589
|||||| ||||||||||||||||||||| |||||
Sbjct: 20958310 gcaccctcctgaactgcatgtcgatgatgccggc 20958277
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 agtgacagtgggcgggagagcaca 119
||||||||||||||||||||||||
Sbjct: 21322317 agtgacagtgggcgggagagcaca 21322340
Score = 48.1 bits (24), Expect = 0.011
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 677 gtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||| |||||||
Sbjct: 20958189 gtagttcatgtccgtgatgaacaccgtc 20958162
Score = 44.1 bits (22), Expect = 0.17
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 316 tgccggactcgttggtgatgcgcatggagaaggg 349
||||||||||| |||||| ||| |||||||||||
Sbjct: 20958553 tgccggactcggtggtgacgcgaatggagaaggg 20958520
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full
insert sequence
Length = 1031
Score = 202 bits (102), Expect = 3e-049
Identities = 214/249 (85%), Gaps = 8/249 (3%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
||||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||| |
Sbjct: 349 gggaagttgcacggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctgg 290
Query: 603 tcgttcaggccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggta 661
|||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 289 tcgttctg-ccccggcttggccatggcgccgaacgccgtgccgctcaggtcgaagtggta 231
Query: 662 cttggccaccgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagca 721
||||| || ||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 230 cttggaaacggggtagtagttcatgtcggtgatgatcaccgtctccgggttgccggagca 171
Query: 722 ggccgggtggttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtc 781
||| ||||||||| | ||| | |||||||||||||||||| || ||||| |||||
Sbjct: 170 ggcagggtggttg------acgcatcttatctggtagcatgagccacagcccttcccgtc 117
Query: 782 cttgaagat 790
|||||||||
Sbjct: 116 cttgaagat 108
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 612 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 553
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 552 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 493
Query: 400 cgtgcat 406
|| ||||
Sbjct: 492 cgcgcat 486
>gb|C19781.1|C19781 C19781 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10926_1A, mRNA sequence
Length = 449
Score = 188 bits (95), Expect = 5e-045
Identities = 241/284 (84%), Gaps = 11/284 (3%)
Strand = Plus / Minus
Query: 633 aacgccgtgccgct-caggtcgaa-gtggtacttggccaccgggtagtagttcatgtccg 690
|||||||||||||| |||||| || ||||||||||| || ||||||||||||||||| |
Sbjct: 366 aacgccgtgccgcttcaggtcnaaagtggtacttggaaacggggtagtagttcatgtcgg 307
Query: 691 tgatgatcaccgtc-tgagccacgccggagcaggccgggtggttgctcttcaggcaccgt 749
|||||||||||||| | | |||||||||||| ||||||||| | ||| | |
Sbjct: 306 tgatgatcaccgtcctcngggttgccggagcaggcagggtggttg------acgcatctt 253
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
||||||||||||||||| || ||||| |||||||||||||| ||||||||||| |||||
Sbjct: 252 atctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggag 193
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| |||||||||||||||||||||||| |||||||||||| ||||| || | ||||
Sbjct: 192 gtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgccatcgtcg 133
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
| ||| ||||||||||||| |||||||| ||||||||| ||||
Sbjct: 132 tcaggg-cggcgccggtgggagcgccgta-caggtggccctggc 91
>gb|D48730.1|D48730 RICS15119A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 407
Score = 186 bits (94), Expect = 2e-044
Identities = 147/165 (89%)
Strand = Plus / Minus
Query: 749 tatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacagga 808
|||||| ||||||||||| || ||||| |||||||||||||| ||||||||||| |||||
Sbjct: 395 tatctgntagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcagga 336
Query: 809 cgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtc 868
||||| |||||||||||||||||||||||| |||||||||||| ||||| || | |||
Sbjct: 335 ggtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgccatcgtc 276
Query: 869 gacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
| | ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 275 gtcagggccggcgccggtgggagcgccgtaccaggtggccctggc 231
>gb|AU198282.1|AU198282 AU198282 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16583, mRNA sequence
Length = 472
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 204 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 145
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 144 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 85
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 84 ggggtagtagttcatgtccgtgatgatcaccgtc 51
>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full
insert sequence
Length = 1026
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 515 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 456
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 455 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 396
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 395 ggggtagtagttcatgtccgtgatgatcaccgtc 362
Score = 184 bits (93), Expect = 7e-044
Identities = 159/181 (87%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| | ||| || ||||||||||||| ||| | |||||||||||
Sbjct: 329 gcaccgtatctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgcc 270
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 269 gcaggaggtcatggacatgaacgggtactggttggtgttcttgaacccgcacgcaccgcc 210
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |||||
Sbjct: 209 gttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccgggagcca 150
Query: 923 g 923
|
Sbjct: 149 g 149
>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full
insert sequence
Length = 1259
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 522 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 463
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 462 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 403
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 402 ggggtagtagttcatgtccgtgatgatcaccgtc 369
Score = 184 bits (93), Expect = 7e-044
Identities = 159/181 (87%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| | ||| || ||||||||||||| ||| | |||||||||||
Sbjct: 336 gcaccgtatctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgcc 277
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 276 gcaggaggtcatggacatgaacgggtactggttggtgttcttgaacccgcacgcaccgcc 217
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |||||
Sbjct: 216 gttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccgggagcca 157
Query: 923 g 923
|
Sbjct: 156 g 156
>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full
insert sequence
Length = 1043
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 524 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 465
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 464 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 405
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 404 ggggtagtagttcatgtccgtgatgatcaccgtc 371
Score = 184 bits (93), Expect = 7e-044
Identities = 159/181 (87%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| | ||| || ||||||||||||| ||| | |||||||||||
Sbjct: 338 gcaccgtatctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgcc 279
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 278 gcaggaggtcatggacatgaacgggtactggttggtgttcttgaacccgcacgcaccgcc 219
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |||||
Sbjct: 218 gttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccgggagcca 159
Query: 923 g 923
|
Sbjct: 158 g 158
>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2
(OSJNBb0014I11.2), mRNA
Length = 1262
Score = 186 bits (94), Expect = 2e-044
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
|||||| || ||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 525 gcacgggacgcgcctgaactggatgtcgatgatgccggcgtggcggagctggtcgttcag 466
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 465 ccccggcctcgccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccac 406
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||||||||||||||||||||||||||||||
Sbjct: 405 ggggtagtagttcatgtccgtgatgatcaccgtc 372
Score = 184 bits (93), Expect = 7e-044
Identities = 159/181 (87%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| | ||| || ||||||||||||| ||| | |||||||||||
Sbjct: 339 gcaccgtatctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgcc 280
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 279 gcaggaggtcatggacatgaacgggtactggttggtgttcttgaacccgcacgcaccgcc 220
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |||||
Sbjct: 219 gttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccgggagcca 160
Query: 923 g 923
|
Sbjct: 159 g 159
>gb|C73067.1|C73067 C73067 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2852_1A, mRNA sequence
Length = 385
Score = 184 bits (93), Expect = 7e-044
Identities = 159/181 (87%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| | ||| || ||||||||||||| ||| | |||||||||||
Sbjct: 307 gcaccgtatctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgcc 248
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 247 gcaggaggtcatggacatgaacgggtactggttggtgttcttgaacccgcacgcaccgcc 188
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |||||
Sbjct: 187 gttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccgggagcca 128
Query: 923 g 923
|
Sbjct: 127 g 127
Score = 56.0 bits (28), Expect = 4e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtc 704
||| || |||||||||||||||||||||||||||
Sbjct: 373 cggntantagttcatgtccgtgatgatcaccgtc 340
>gb|AU184759.1|AU184759 AU184759 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3782, mRNA sequence
Length = 441
Score = 184 bits (93), Expect = 7e-044
Identities = 159/181 (87%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| | ||| || ||||||||||||| ||| | |||||||||||
Sbjct: 308 gcaccgtatctggtagcaggcgccacagcccttgccgtcctggaacagaggctcgttgcc 249
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 248 gcaggaggtcatggacatgaacgggtactggttggtgttcttgaacccgcacgcaccgcc 189
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||||||| |||| ||||||||| |||| |||||||||||||||||||||||| |||||
Sbjct: 188 gttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccgggagcca 129
Query: 923 g 923
|
Sbjct: 128 g 128
Score = 135 bits (68), Expect = 6e-029
Identities = 80/84 (95%)
Strand = Plus / Minus
Query: 621 gccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtag 680
||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 424 gccatggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtag 365
Query: 681 ttcatgtccgtgatgatcaccgtc 704
||||||||||||||||||||||||
Sbjct: 364 ttcatgtccgtgatgatcaccgtc 341
>gb|C28558.1|C28558 C28558 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C61589_1A, mRNA sequence
Length = 462
Score = 182 bits (92), Expect = 3e-043
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 392 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 333
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 332 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 273
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 272 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 217
Score = 50.1 bits (25), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 674 gtagtagttcatgtccgtgatgatcaccgtct 705
||||||||||||||| || |||||||||||||
Sbjct: 462 gtagtagttcatgtcggtnatgatcaccgtct 431
>gb|AU062937.1|AU062937 AU062937 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51730_3A, mRNA sequence
Length = 424
Score = 182 bits (92), Expect = 3e-043
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 398 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 339
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 338 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 279
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 278 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 223
>gb|CF332237.1|CF332237 NACL--08-K17.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-K17, mRNA sequence
Length = 587
Score = 182 bits (92), Expect = 3e-043
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 411 atctggtagcatgagccgcagcccttgccgtccttgaagatgggctcgttgccgcaggag 352
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 351 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 292
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 291 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 236
Score = 149 bits (75), Expect = 4e-033
Identities = 125/139 (89%), Gaps = 2/139 (1%)
Strand = Plus / Minus
Query: 568 actgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggccatg 626
|||| ||||||||||| || | ||| |||||||||||||| || |||| ||| |||||||
Sbjct: 587 actggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggccatg 529
Query: 627 gacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatg 686
| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 528 gcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagttcatg 469
Query: 687 tccgtgatgatcaccgtct 705
|| ||||||||||||||||
Sbjct: 468 tcggtgatgatcaccgtct 450
>gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60311_1A, mRNA sequence
Length = 378
Score = 178 bits (90), Expect = 4e-042
Identities = 169/193 (87%), Gaps = 2/193 (1%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
||||| ||||||||||||| | ||||||| ||||||||||| |||||||| ||||||| |
Sbjct: 233 gggaanttgcacggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctgg 174
Query: 603 tcgttcaggccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggta 661
|||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 173 tcgttctg-ccccggcttggccatggcgccgaacgccgtgccgctcaggtcgaagtggta 115
Query: 662 cttggccaccgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagca 721
||||| || ||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 114 cttggaaacggggtagtagttcatgtcggtgatgatcaccgtctccgggttgccggagca 55
Query: 722 ggccgggtggttg 734
||| |||||||||
Sbjct: 54 ggcagggtggttg 42
>gb|AU068468.1|AU068468 AU068468 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30315_4A, mRNA sequence
Length = 381
Score = 174 bits (88), Expect = 7e-041
Identities = 139/156 (89%)
Strand = Plus / Minus
Query: 758 gcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcatgga 817
||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct: 381 gcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggtcatcga 322
Query: 818 cgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcgacggggcc 877
|||||||||||||||||||||| |||||||||||| ||||| || | |||| | |||||
Sbjct: 321 cgagaacgggtactggttggtgttcttgaacccgcaagcaccgccatcgtcgtcagggcc 262
Query: 878 ggcgccggtgggggcgccgtaccaggtggccttggc 913
|||||||||||| |||||||||||||||||| ||||
Sbjct: 261 ggcgccggtgggagcgccgtaccaggtggccctggc 226
>gb|CD670675.1|CD670675 OsMR090 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 636
Score = 174 bits (88), Expect = 7e-041
Identities = 154/176 (87%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 418 atctggtagcatgagccgcagcctttgccgtccttgaagatgggctcgttgccgcaggag 359
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 358 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 299
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 298 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 243
Score = 157 bits (79), Expect = 2e-035
Identities = 129/143 (90%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 564 ctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggc 622
|||||||| ||||||||||| || | ||| |||||||||||||| || |||| ||| |||
Sbjct: 598 ctgaactggatgtcgatgatgcccgagtggcggagcttgtcgttgag-ccccggcttggc 540
Query: 623 catggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagtt 682
||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 539 catggcgccgaacgccgtgccgctcaggtcgaagtggtacctggccacggggtagtagtt 480
Query: 683 catgtccgtgatgatcaccgtct 705
|||||| ||||||||||||||||
Sbjct: 479 catgtcggtgatgatcaccgtct 457
>gb|D39004.1|D39004 RICR0481A Rice root Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 391
Score = 170 bits (86), Expect = 1e-039
Identities = 159/182 (87%), Gaps = 1/182 (0%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtag-catgagccgcaacccttgccgtccttgaagatgggctcgttgc 801
|||||||||||||||| || | ||| || ||||||||||||| ||| | ||||||||||
Sbjct: 310 gcaccgtatctggtaggcaggcgccacagcccttgccgtcctggaacagaggctcgttgc 251
Query: 802 cacaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccac 861
| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| |
Sbjct: 250 cgcaggaggtcatggacatgaacgggtactggttggtgttcttgaacccgcacgcaccgc 191
Query: 862 cgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcc 921
|||||||| |||| ||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 190 cgttgtcgtcgggtccggcgccgttgggctggccgtaccaggtggccttggccgggagcc 131
Query: 922 ag 923
||
Sbjct: 130 ag 129
Score = 79.8 bits (40), Expect = 3e-012
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 657 tggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtc 704
|||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 391 tggtacctggccacggggtagtagttcatgtccgtgatgatcaccgtc 344
>gb|C72255.1|C72255 C72255 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1309_1A, mRNA sequence
Length = 444
Score = 167 bits (84), Expect = 2e-038
Identities = 154/176 (87%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 320 atctggtaacatga-ccgcaacccttgccgtccttgaagatgggctcgttgccgcaggag 262
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||||||| ||||||||||| | |||||||||||| || || |||||||||
Sbjct: 261 gtcatggacgagaatgggtactggttcacgttcttgaacccgcaagcgccgccgttgtcg 202
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagccagcc 925
| ||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||
Sbjct: 201 tcagggccggcgccggtgggagcgccataccaggttgcccgggcagggagccagcc 146
Score = 56.0 bits (28), Expect = 4e-005
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 642 ccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtccgtgatgatcacc 701
||||| ||||| || |||||| ||||||| ||||| |||| |||||| || |||||||||
Sbjct: 420 ccgctaaggtcnaantggtacctggccacggggtantagt-catgtcggtnatgatcacc 362
Query: 702 gtct 705
||||
Sbjct: 361 gtct 358
>gb|D47446.1|D47446 RICS12935A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 362
Score = 161 bits (81), Expect = 1e-036
Identities = 123/137 (89%)
Strand = Plus / Minus
Query: 777 ccgtccttgaagatgggctcgttgccacaggacgtcatggacgagaacgggtactggttg 836
|||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 358 ccgtccttgaagataggctcgttgccgcaggaggtcatcgacgagaacgggtactggttg 299
Query: 837 gtgcccttgaacccgcacgcaccaccgttgtcgacggggccggcgccggtgggggcgccg 896
||| |||||||||||| ||||| || | |||| | ||||||||||||||||| ||||||
Sbjct: 298 gtgttcttgaacccgcaagcaccgccatcgtcgtcagggccggcgccggtgggagcgccg 239
Query: 897 taccaggtggccttggc 913
|||||||||||| ||||
Sbjct: 238 taccaggtggccctggc 222
>gb|D47570.1|D47570 RICS13152A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 459
Score = 159 bits (80), Expect = 4e-036
Identities = 140/160 (87%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 749 tatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacagga 808
||||||||| ||||| || |||||||| ||||| || ||||| |||||||| || |||||
Sbjct: 385 tatctggtancatgaaccacaacccttcccgtc-ttnaagataggctcgttnccncagga 327
Query: 809 cgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtc 868
||||| |||||||||||||||||||||||| |||||||||||| ||||| || | |||
Sbjct: 326 ggtcatcgacgagaacgggtactggttggtgttcttgaacccgcaagcaccgccatcgtc 267
Query: 869 gacggggccggcgccggtgggggcgccgtaccaggtggcc 908
| | ||||||||||||||||| ||||||||||||||||||
Sbjct: 266 gtcagggccggcgccggtgggagcgccgtaccaggtggcc 227
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence,
complete sequence
Length = 147117
Score = 157 bits (79), Expect = 2e-035
Identities = 150/171 (87%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct-ggcc 623
||||||| ||||||||||| |||||||| ||||||| ||||||| | |||| ||| ||||
Sbjct: 4739 tgaactggatgtcgatgatgccggcgtggcggagctggtcgttctg-ccccggcttggcc 4797
Query: 624 atggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttc 683
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 4798 atggcgccgaacgccgtgccgctcaggtcgaagtggtacttggaaacggggtagtagttc 4857
Query: 684 atgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttg 734
||||| |||||||||||||||| | |||||||||||| |||||||||
Sbjct: 4858 atgtcggtgatgatcaccgtctccgggttgccggagcaggcagggtggttg 4908
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 5056 ctggtagcatgagccacagcccttcccgtccttgaagataggctcgttgccgcaggaggt 5115
Query: 812 catggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 5116 catcgacgagaacgggtactggttggtgttcttgaacccgcaagcacc 5163
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 15780 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 15721
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 15720 gtgatgatcaccgtct 15705
Score = 99.6 bits (50), Expect = 3e-018
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 755 gtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcat 814
|||||| |||||||| ||||||||||||||||| | |||| |||||| ||||| |||||
Sbjct: 15412 gtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggaggtcat 15353
Query: 815 ggacgagaacgggtactggttggtgcccttgaacccgcacgc 856
||| ||||||||||||||||||| |||||||||||||||
Sbjct: 15352 cgacatgaacgggtactggttggtgtgcttgaacccgcacgc 15311
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 16726 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 16667
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 16666 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 16607
Query: 400 c 400
|
Sbjct: 16606 c 16606
Score = 77.8 bits (39), Expect = 1e-011
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
|||||||||||||||| | |||| || |||||| |||||||||||||||||||||| |
Sbjct: 4109 agttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgcgga 4168
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
|||||||| | ||| || |||||| ||||| |||||||||||||||||| ||||
Sbjct: 4169 gcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacgact 4228
Query: 400 cgtgcat 406
|| ||||
Sbjct: 4229 cgcgcat 4235
Score = 65.9 bits (33), Expect = 5e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 873 gggccggcgccggtgggggcgccgtaccaggtggccttggc 913
||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 5280 gggccggcgccggtgggagcgccgtaccaggtggccctggc 5320
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 860 accgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||| |||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 15213 accgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggccctggcc 15159
>gb|AU181572.1|AU181572 AU181572 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50438, mRNA sequence
Length = 454
Score = 153 bits (77), Expect = 3e-034
Identities = 143/165 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| |||||| |||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 440 atcttgtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 381
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| ||| ||||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct: 380 gtcatcgacatgaacgggtactggttggtgtgcttgaacccgcacgcgccgccgttgtcg 321
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 320 tcggggccggcgccgttgggctggccgtaccaggtggccctggcc 276
>gb|AU225439.1|AU225439 AU225439 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0399, mRNA sequence
Length = 540
Score = 153 bits (77), Expect = 3e-034
Identities = 143/165 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| |||||| |||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 445 atcttgtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 386
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| ||| ||||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct: 385 gtcatcgacatgaacgggtactggttggtgtgcttgaacccgcacgcgccgccgttgtcg 326
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 325 tcggggccggcgccgttgggctggccgtaccaggtggccctggcc 281
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 649 ggtcgaagtggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||||||| || ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 540 ggtcgaagtggaacggagccaccgggtagtagttcatgtcggtgatgatcaccgtct 484
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
insert sequence
Length = 1293
Score = 153 bits (77), Expect = 3e-034
Identities = 143/165 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| |||||| |||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 454 atcttgtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 395
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| ||| ||||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct: 394 gtcatcgacatgaacgggtactggttggtgtgcttgaacccgcacgcgccgccgttgtcg 335
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 334 tcggggccggcgccgttgggctggccgtaccaggtggccctggcc 290
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 568 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 509
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 508 gtgatgatcaccgtct 493
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 936 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 877
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 876 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 817
Query: 400 c 400
|
Sbjct: 816 c 816
Score = 44.1 bits (22), Expect = 0.17
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 540 cccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagc 599
|||||||| | ||| ||||||| |||||| ||||||||||| |||| ||| || |||
Sbjct: 658 cccgggaactcgcatggcaccctggtgaactcgatgtcgatgatgccggagtggcgcagc 599
Query: 600 ttgtcgttcaggcc 613
|||||||| |||||
Sbjct: 598 ttgtcgttgaggcc 585
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
insert sequence
Length = 1794
Score = 153 bits (77), Expect = 3e-034
Identities = 143/165 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| |||||| |||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 454 atcttgtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 395
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| ||| ||||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct: 394 gtcatcgacatgaacgggtactggttggtgtgcttgaacccgcacgcgccgccgttgtcg 335
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 334 tcggggccggcgccgttgggctggccgtaccaggtggccctggcc 290
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 568 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 509
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 508 gtgatgatcaccgtct 493
Score = 81.8 bits (41), Expect = 8e-013
Identities = 98/117 (83%)
Strand = Plus / Minus
Query: 284 ggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgcatgga 343
||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |||||
Sbjct: 932 ggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatgga 873
Query: 344 gaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggactc 400
||||||| | ||||| | |||||| ||| | |||||||||||||||||| |||||
Sbjct: 872 gaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgactc 816
Score = 44.1 bits (22), Expect = 0.17
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 540 cccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagc 599
|||||||| | ||| ||||||| |||||| ||||||||||| |||| ||| || |||
Sbjct: 658 cccgggaactcgcatggcaccctggtgaactcgatgtcgatgatgccggagtggcgcagc 599
Query: 600 ttgtcgttcaggcc 613
|||||||| |||||
Sbjct: 598 ttgtcgttgaggcc 585
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
insert sequence
Length = 1475
Score = 153 bits (77), Expect = 3e-034
Identities = 143/165 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| |||||| |||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 636 atcttgtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 577
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| ||| ||||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct: 576 gtcatcgacatgaacgggtactggttggtgtgcttgaacccgcacgcgccgccgttgtcg 517
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 516 tcggggccggcgccgttgggctggccgtaccaggtggccctggcc 472
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 750 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 691
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 690 gtgatgatcaccgtct 675
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 1118 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 1059
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 1058 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 999
Query: 400 c 400
|
Sbjct: 998 c 998
Score = 44.1 bits (22), Expect = 0.17
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 540 cccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagc 599
|||||||| | ||| ||||||| |||||| ||||||||||| |||| ||| || |||
Sbjct: 840 cccgggaactcgcatggcaccctggtgaactcgatgtcgatgatgccggagtggcgcagc 781
Query: 600 ttgtcgttcaggcc 613
|||||||| |||||
Sbjct: 780 ttgtcgttgaggcc 767
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
insert sequence
Length = 1266
Score = 153 bits (77), Expect = 3e-034
Identities = 143/165 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| |||||| |||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 448 atcttgtagcaagagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 389
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
||||| ||| ||||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct: 388 gtcatcgacatgaacgggtactggttggtgtgcttgaacccgcacgcgccgccgttgtcg 329
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggcc 914
|||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 328 tcggggccggcgccgttgggctggccgtaccaggtggccctggcc 284
Score = 103 bits (52), Expect = 2e-019
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 562 ccgaacgccgtgccgctgaggtcgaagtggaacggagccaccgggtagtagttcatgtcg 503
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 502 gtgatgatcaccgtct 487
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 280 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 339
||||||||||||||||||| ||||| || ||| | |||||||||||||| |||||| |
Sbjct: 930 agttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcgga 871
Query: 340 tggagaaggggccacggagcgggcggttggggtcgatcctccagatggagccccaggact 399
||||||||||| | ||||| | |||||| ||| | |||||||||||||||||| ||||
Sbjct: 870 tggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacgact 811
Query: 400 c 400
|
Sbjct: 810 c 810
Score = 44.1 bits (22), Expect = 0.17
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 540 cccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagc 599
|||||||| | ||| ||||||| |||||| ||||||||||| |||| ||| || |||
Sbjct: 652 cccgggaactcgcatggcaccctggtgaactcgatgtcgatgatgccggagtggcgcagc 593
Query: 600 ttgtcgttcaggcc 613
|||||||| |||||
Sbjct: 592 ttgtcgttgaggcc 579
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,683,329
Number of Sequences: 438736
Number of extensions: 1683329
Number of successful extensions: 13232
Number of sequences better than 0.5: 217
Number of HSP's better than 0.5 without gapping: 217
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11722
Number of HSP's gapped (non-prelim): 1426
length of query: 1155
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1134
effective length of database: 2,791,206,460
effective search space: 3165228125640
effective search space used: 3165228125640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)