BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3742446.2.1
(598 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB670852.1|CB670852 OSJNEe04C10.f OSJNEe Oryza sativa (j... 402 e-110
gb|CB647042.1|CB647042 OSJNEb09M19.f OSJNEb Oryza sativa (j... 367 5e-099
dbj|AK068499.1| Oryza sativa (japonica cultivar-group) cDNA... 359 1e-096
gb|CB660687.1|CB660687 OSJNEd02K23.f OSJNEd Oryza sativa (j... 317 4e-084
gb|AZ047845.1|AZ047845 nbeb0095C16f CUGI Rice BAC Library (... 212 2e-052
dbj|AP003821.1| Oryza sativa (japonica cultivar-group) chro... 212 2e-052
gb|AACV01016950.1| Oryza sativa (japonica cultivar-group) c... 212 2e-052
dbj|AP005182.5| Oryza sativa (japonica cultivar-group) geno... 212 2e-052
dbj|AP005184.5| Oryza sativa (japonica cultivar-group) geno... 212 2e-052
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 212 2e-052
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 212 2e-052
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 212 2e-052
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 212 2e-052
gb|C19278.1|C19278 C19278 Rice panicle at ripening stage Or... 165 3e-038
gb|CB661844.1|CB661844 OSJNEd05D15.f OSJNEd Oryza sativa (j... 94 1e-016
gb|CB660688.1|CB660688 OSJNEd02K23.r OSJNEd Oryza sativa (j... 58 6e-006
gb|CB670853.1|CB670853 OSJNEe04C10.r OSJNEe Oryza sativa (j... 58 6e-006
dbj|AK060988.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK069177.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
gb|AACV01001283.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
ref|NM_193731.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 52 3e-004
dbj|AP003435.2| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
dbj|AP003217.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|AQ273257.1|AQ273257 nbxb0029H15f CUGI Rice BAC Library O... 50 0.001
gb|AQ329439.1|AQ329439 nbxb0045A19r CUGI Rice BAC Library O... 50 0.001
gb|CG408776.1|CG408776 Ds469 Ds insertion lines Oryza sativ... 50 0.001
dbj|AK071372.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, N... 50 0.001
gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbar... 50 0.001
gb|AACV01006514.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01021195.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|NM_195684.1| Oryza sativa (japonica cultivar-group) put... 50 0.001
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 50 0.001
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 50 0.001
gb|CH401251.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CF276027.1|CF276027 14ETL--01-A08.b1 Rice etiolated leaf... 48 0.005
gb|AQ574428.1|AQ574428 nbxb0085B03f CUGI Rice BAC Library O... 44 0.085
>gb|CB670852.1|CB670852 OSJNEe04C10.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C10 5', mRNA sequence
Length = 816
Score = 402 bits (203), Expect = e-110
Identities = 493/587 (83%), Gaps = 2/587 (0%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 231 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 290
Query: 72 gcccaaagattgtggaggcgtttgcagactacgccgagttctgcttccacgcgttcggag 131
||||||| || || |||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 291 gcccaaacatcgtagaggcgtttgcagactacgcagatttctgcttccagacgttcggag 350
Query: 132 acagggtgaagaactggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacg 191
||||||||||| |||||||||||||||| |||||||| ||||| |||||||| || || |
Sbjct: 351 acagggtgaaggactggtttaccttcaatgagccgagatgcgttgctgctctaggatatg 410
Query: 192 acaatggcttgcacgcaccgggaaggtgttccgggtgccccgccggaggcaactccacca 251
|||||||||| || || ||||||||||| || || || || |||||||||||||| |
Sbjct: 411 acaatggcttccatgccccgggaaggtgctctggctgtgatgcaggaggcaactccacga 470
Query: 252 cggaaccgtaccttgtcgcacaccatctcatcctttctcatgcagctgcggccaggcgat 311
| ||||| ||||||| || ||||||||||||||||||||||| || || | || |||||
Sbjct: 471 cagaaccataccttgctgcccaccatctcatcctttctcatgctgccgccgtcaagcgat 530
Query: 312 accgcgacaagtatcagcttcaccagaaggggaagattggaattctcctggatttcgtgt 371
||||||| |||||||||||| | || ||||||| ||||||||||||| ||||||| || |
Sbjct: 531 accgcgaaaagtatcagctttatcaaaaggggaggattggaattctcttggattttgtct 590
Query: 372 ggtacgaacctttcagcgacagcaatgcggaccaggctgcagcacagcgagccagggact 431
|||| ||||| ||||| ||||||||||| || ||||||||||||| | || || || |
Sbjct: 591 ggtatgaaccattcagtgacagcaatgctgatagggctgcagcacagagggcaagagatt 650
Query: 432 tccacctaggctggttccttgaccccattgtacatggacggtacccgtactcgatgcaag 491
| ||||| || |||||||||||||||||| | ||||| |||||||| |||||||||| |
Sbjct: 651 ttcacctcggatggttccttgaccccattatccatggtcggtacccatactcgatgctcg 710
Query: 492 agattgccaaagacaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggct 551
| || | ||| |||||| | || ||||| ||||| || ||||||||| ||||| ||
Sbjct: 711 aaatcgtcaaggacaggatgccaaccttcagtgatgaggagtccaggatggtgaaagact 770
Query: 552 ctatagactatgttggcatcaaccactacacttcttttctacatgaa 598
| ||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 771 caatagattatgttggcatcaaccactacacctc-tttctacatgaa 816
>gb|CB647042.1|CB647042 OSJNEb09M19.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09M19 5', mRNA sequence
Length = 789
Score = 367 bits (185), Expect = 5e-099
Identities = 405/477 (84%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 304 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 363
Query: 72 gcccaaagattgtggaggcgtttgcagactacgccgagttctgcttccacgcgttcggag 131
||||||| || || |||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 364 gcccaaacatcgtagaggcgtttgcagactacgcagatttctgcttccagacgttcggag 423
Query: 132 acagggtgaagaactggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacg 191
||||||||||| |||||||||||||||| |||||||| ||||| |||||||| || || |
Sbjct: 424 acagggtgaaggactggtttaccttcaatgagccgagatgcgttgctgctctaggatatg 483
Query: 192 acaatggcttgcacgcaccgggaaggtgttccgggtgccccgccggaggcaactccacca 251
|||||||||| || || ||||||||||| || || || || |||||||||||||| |
Sbjct: 484 acaatggcttccatgccccgggaaggtgctctggctgtgatgcaggaggcaactccacga 543
Query: 252 cggaaccgtaccttgtcgcacaccatctcatcctttctcatgcagctgcggccaggcgat 311
| ||||| ||||||| || ||||||||||||||||||||||| || || | || |||||
Sbjct: 544 cagaaccataccttgctgcccaccatctcatcctttctcatgctgccgccgtcaagcgat 603
Query: 312 accgcgacaagtatcagcttcaccagaaggggaagattggaattctcctggatttcgtgt 371
||||||| |||||||||||| | || ||||||| ||||||||||||| ||||||| || |
Sbjct: 604 accgcgaaaagtatcagctttatcaaaaggggaggattggaattctcttggattttgtct 663
Query: 372 ggtacgaacctttcagcgacagcaatgcggaccaggctgcagcacagcgagccagggact 431
|||| ||||| ||||| ||||||||||| || ||||||||||||| | || || || |
Sbjct: 664 ggtatgaaccattcagtgacagcaatgctgatagggctgcagcacagagggcaagagatt 723
Query: 432 tccacctaggctggttccttgaccccattgtacatggacggtacccgtactcgatgc 488
| ||||| || |||||||||||||||||| | ||||| |||||||| ||||||||||
Sbjct: 724 ttcacctcggatggttccttgaccccattatccatggtcggtacccatactcgatgc 780
>dbj|AK068499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155M12, full
insert sequence
Length = 1897
Score = 359 bits (181), Expect = 1e-096
Identities = 431/513 (84%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 642 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 701
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 702 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 761
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 762 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 821
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 822 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 881
Query: 326 cagcttcaccagaaggggaagattggaattctcctggatttcgtgtggtacgaacctttc 385
|||||| | || ||||||| ||||||||||||| ||||||| || ||||| ||||| |||
Sbjct: 882 cagctttatcaaaaggggaggattggaattctcttggattttgtctggtatgaaccattc 941
Query: 386 agcgacagcaatgcggaccaggctgcagcacagcgagccagggacttccacctaggctgg 445
|| ||||||||||| || ||||||||||||| | || || || || ||||| || |||
Sbjct: 942 agtgacagcaatgctgatagggctgcagcacagagggcaagagattttcacctcggatgg 1001
Query: 446 ttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaagac 505
||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |||
Sbjct: 1002 ttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaaggac 1061
Query: 506 aggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatgtt 565
||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||||
Sbjct: 1062 aggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatgtt 1121
Query: 566 ggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||| || ||||||||||||
Sbjct: 1122 ggcatcaaccactacacctc-tttctacatgaa 1153
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 472 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 531
Query: 72 gcccaaa 78
|||||||
Sbjct: 532 gcccaaa 538
>gb|CB660687.1|CB660687 OSJNEd02K23.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02K23 5', mRNA sequence
Length = 863
Score = 317 bits (160), Expect = 4e-084
Identities = 332/388 (85%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 465 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 524
Query: 72 gcccaaagattgtggaggcgtttgcagactacgccgagttctgcttccacgcgttcggag 131
||||||| || || |||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 525 gcccaaacatcgtagaggcgtttgcagactacgcagatttctgcttccagacgttcggag 584
Query: 132 acagggtgaagaactggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacg 191
||||||||||| |||||||||||||||| |||||||| ||||| |||||||| || || |
Sbjct: 585 acagggtgaaggactggtttaccttcaatgagccgagatgcgttgctgctctaggatatg 644
Query: 192 acaatggcttgcacgcaccgggaaggtgttccgggtgccccgccggaggcaactccacca 251
|||||||||| || || ||||||||||| || || || || |||||||||||||| |
Sbjct: 645 acaatggcttccatgccccgggaaggtgctctggctgtgatgcaggaggcaactccacga 704
Query: 252 cggaaccgtaccttgtcgcacaccatctcatcctttctcatgcagctgcggccaggcgat 311
| ||||| ||||||| || ||||||||||||||||||||||| || || | || |||||
Sbjct: 705 cagaaccataccttgctgcccaccatctcatcctttctcatgctgccgccgtcaagcgat 764
Query: 312 accgcgacaagtatcagcttcaccagaaggggaagattggaattctcctggatttcgtgt 371
||||||| |||||||||||| | || ||||||| ||||||||||||| ||||||| || |
Sbjct: 765 accgcgaaaagtatcagctttatcaaaaggggaggattggaattctcttggattttgtct 824
Query: 372 ggtacgaacctttcagcgacagcaatgc 399
|||| ||||| ||||| |||||||||||
Sbjct: 825 ggtatgaaccattcagtgacagcaatgc 852
>gb|AZ047845.1|AZ047845 nbeb0095C16f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0095C16f, DNA
sequence
Length = 830
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Minus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 431 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 372
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 371 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 312
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 311 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 252
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 251 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 192
Query: 326 cag 328
|||
Sbjct: 191 cag 189
Score = 50.1 bits (25), Expect = 0.001
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 19 tctaccattatgacctcccattggcactccatgaacag-acctgggctggcttagcccaa 77
||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |||||||
Sbjct: 595 tctaccactatgacctaccattagcactccatgagcagtacttaggctggctaagcccaa 536
Query: 78 a 78
|
Sbjct: 535 a 535
>dbj|AP003821.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1308_C12,
*** SEQUENCING IN PROGRESS ***
Length = 99427
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Minus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 35381 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 35322
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 35321 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 35262
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 35261 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 35202
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 35201 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 35142
Query: 326 cag 328
|||
Sbjct: 35141 cag 35139
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 34718 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 34659
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 34658 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 34599
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 34598 ttggcatcaaccactacacctc-tttctacatgaa 34565
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 35001 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 34942
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 34941 gctgatagggctgcagcacag 34921
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 35551 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 35492
Query: 72 gcccaaa 78
|||||||
Sbjct: 35491 gcccaaa 35485
>gb|AACV01016950.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016950, whole
genome shotgun sequence
Length = 44918
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 5606 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 5665
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 5666 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 5725
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 5726 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 5785
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 5786 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 5845
Query: 326 cag 328
|||
Sbjct: 5846 cag 5848
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 6269 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 6328
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 6329 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 6388
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 6389 ttggcatcaaccactacacctc-tttctacatgaa 6422
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 5986 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 6045
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 6046 gctgatagggctgcagcacag 6066
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 5436 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 5495
Query: 72 gcccaaa 78
|||||||
Sbjct: 5496 gcccaaa 5502
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0018C07
Length = 141707
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 127090 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 127149
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 127150 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 127209
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 127210 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 127269
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 127270 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 127329
Query: 326 cag 328
|||
Sbjct: 127330 cag 127332
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 127753 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 127812
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 127813 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 127872
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 127873 ttggcatcaaccactacacctc-tttctacatgaa 127906
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 127470 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 127529
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 127530 gctgatagggctgcagcacag 127550
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 126920 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 126979
Query: 72 gcccaaa 78
|||||||
Sbjct: 126980 gcccaaa 126986
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0047B07
Length = 157797
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 20112 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 20171
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 20172 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 20231
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 20232 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 20291
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 20292 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 20351
Query: 326 cag 328
|||
Sbjct: 20352 cag 20354
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 20775 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 20834
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 20835 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 20894
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 20895 ttggcatcaaccactacacctc-tttctacatgaa 20928
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 20492 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 20551
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 20552 gctgatagggctgcagcacag 20572
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 19942 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 20001
Query: 72 gcccaaa 78
|||||||
Sbjct: 20002 gcccaaa 20008
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 15176124 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 15176183
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 15176184 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 15176243
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 15176244 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 15176303
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 15176304 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 15176363
Query: 326 cag 328
|||
Sbjct: 15176364 cag 15176366
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 15176787 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 15176846
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 15176847 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 15176906
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 15176907 ttggcatcaaccactacacctc-tttctacatgaa 15176940
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 15176504 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 15176563
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 15176564 gctgatagggctgcagcacag 15176584
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 15175954 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 15176013
Query: 72 gcccaaa 78
|||||||
Sbjct: 15176014 gcccaaa 15176020
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 13114998 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 13115057
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 13115058 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 13115117
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 13115118 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 13115177
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 13115178 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 13115237
Query: 326 cag 328
|||
Sbjct: 13115238 cag 13115240
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 13115661 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 13115720
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 13115721 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 13115780
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 13115781 ttggcatcaaccactacacctc-tttctacatgaa 13115814
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 13115378 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 13115437
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 13115438 gctgatagggctgcagcacag 13115458
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 13114828 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 13114887
Query: 72 gcccaaa 78
|||||||
Sbjct: 13114888 gcccaaa 13114894
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 26514437 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 26514496
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 26514497 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 26514556
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 26514557 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 26514616
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 26514617 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 26514676
Query: 326 cag 328
|||
Sbjct: 26514677 cag 26514679
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 26515100 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 26515159
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 26515160 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 26515219
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 26515220 ttggcatcaaccactacacctc-tttctacatgaa 26515253
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 26514817 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 26514876
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 26514877 gctgatagggctgcagcacag 26514897
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 26514267 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 26514326
Query: 72 gcccaaa 78
|||||||
Sbjct: 26514327 gcccaaa 26514333
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 212 bits (107), Expect = 2e-052
Identities = 209/243 (86%)
Strand = Plus / Plus
Query: 86 gaggcgtttgcagactacgccgagttctgcttccacgcgttcggagacagggtgaagaac 145
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 27563119 gaggcgtttgcagactacgcagatttctgcttccagacgttcggagacagggtgaaggac 27563178
Query: 146 tggtttaccttcaacgagccgaggtgcgtcgctgctctgggctacgacaatggcttgcac 205
|||||||||||||| |||||||| ||||| |||||||| || || ||||||||||| ||
Sbjct: 27563179 tggtttaccttcaatgagccgagatgcgttgctgctctaggatatgacaatggcttccat 27563238
Query: 206 gcaccgggaaggtgttccgggtgccccgccggaggcaactccaccacggaaccgtacctt 265
|| ||||||||||| || || || || |||||||||||||| || ||||| ||||||
Sbjct: 27563239 gccccgggaaggtgctctggctgtgatgcaggaggcaactccacgacagaaccatacctt 27563298
Query: 266 gtcgcacaccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtat 325
| || ||||||||||||||||||||||| || || | || |||||||||||| ||||||
Sbjct: 27563299 gctgcccaccatctcatcctttctcatgctgccgccgtcaagcgataccgcgaaaagtat 27563358
Query: 326 cag 328
|||
Sbjct: 27563359 cag 27563361
Score = 93.7 bits (47), Expect = 1e-016
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaag 503
||||||||||||||||| | ||||| |||||||| |||||||||| || || | ||| |
Sbjct: 27563782 ggttccttgaccccattatccatggtcggtacccatactcgatgctcgaaatcgtcaagg 27563841
Query: 504 acaggctaccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatg 563
||||| | || ||||| ||||| || ||||||||| ||||| ||| ||||| ||||
Sbjct: 27563842 acaggatgccaaccttcagtgatgaggagtccaggatggtgaaagactcaatagattatg 27563901
Query: 564 ttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||| || ||||||||||||
Sbjct: 27563902 ttggcatcaaccactacacctc-tttctacatgaa 27563935
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgacagcaat 397
||||||| ||||||||||||| ||||||| || ||||| ||||| ||||| |||||||||
Sbjct: 27563499 aaggggaggattggaattctcttggattttgtctggtatgaaccattcagtgacagcaat 27563558
Query: 398 gcggaccaggctgcagcacag 418
|| || |||||||||||||
Sbjct: 27563559 gctgatagggctgcagcacag 27563579
Score = 54.0 bits (27), Expect = 9e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 27562949 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 27563008
Query: 72 gcccaaa 78
|||||||
Sbjct: 27563009 gcccaaa 27563015
>gb|C19278.1|C19278 C19278 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10201_1A, mRNA sequence
Length = 346
Score = 165 bits (83), Expect = 3e-038
Identities = 254/311 (81%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 272 caccatctcatcctttctcatgcagctgcggccaggcgataccgcgacaagtatcagctt 331
||||||||||||||||||||||| || || | || ||||||||||| ||||||||||||
Sbjct: 7 caccatctcatcctttctcatgctgccgccgtcaagcgataccgcggaaagtatcagctt 66
Query: 332 caccagaaggggaagattggaattctcctggatttcgtgtggtacgaacctttcagcgac 391
| || ||||||| ||||||||||||| | ||||| || ||||| ||||| ||||| |||
Sbjct: 67 tatcaaaaggggaggattggaattctcttngattttgtctggtatgaaccattcagtgac 126
Query: 392 agcaatgcggaccaggctgcagcacagcgagccagggacttccacctaggctggttcctt 451
|||||||| || ||||||||||||| | || || || || ||||| || |||||||||
Sbjct: 127 agcaatgctgatagggctgcagcacagagggcaagagattttcacctcggatggttcctt 186
Query: 452 gaccccattgtacatggacggtacccgtactcgatgcaagagattgccaaagacaggcta 511
||||||||| | ||||| |||||||| ||||| |||| || || | ||| |||||| |
Sbjct: 187 gaccccattatccatggtcggtacccatactcnatgctcganatcgtcaaggacaggatg 246
Query: 512 ccgttgttcagcgatgaagaagccaggatggcgaaaggctctatagactatgtt-ggcat 570
|| ||||| ||||| || |||||||| ||||| ||| ||||| |||||| |||||
Sbjct: 247 ccaaccttcagtgatgaggagtncaggatggtgaaagactcaatagattatgttgggcat 306
Query: 571 caaccactaca 581
|||||||||||
Sbjct: 307 caaccactaca 317
>gb|CB661844.1|CB661844 OSJNEd05D15.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05D15 5', mRNA sequence
Length = 742
Score = 93.7 bits (47), Expect = 1e-016
Identities = 93/107 (86%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatgaacag-acctgggctggctta 71
|||| |||||||| |||||||| ||||| ||||||||||| ||| || | |||||||| |
Sbjct: 636 caaacctctaccactatgacctaccattagcactccatgagcagtacttaggctggctaa 695
Query: 72 gcccaaagattgtggaggcgtttgcagactacgccgagttctgcttc 118
||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 696 gcccaaacatcgtagaggcgtttgcagactacgcagatttctgcttc 742
>gb|CB660688.1|CB660688 OSJNEd02K23.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02K23 3', mRNA sequence
Length = 814
Score = 58.0 bits (29), Expect = 6e-006
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 554 atagactatgttggcatcaaccactacacttcttttctacatgaa 598
||||| ||||||||||||||||||||||| |||||| ||||||||
Sbjct: 811 atagattatgttggcatcaaccactacacctctttt-tacatgaa 768
>gb|CB670853.1|CB670853 OSJNEe04C10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C10 3', mRNA sequence
Length = 753
Score = 58.0 bits (29), Expect = 6e-006
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 554 atagactatgttggcatcaaccactacacttcttttctacatgaa 598
||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 750 atagattatgttggcatcaaccactacacctc-tttctacatgaa 707
>dbj|AK060988.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C08, full
insert sequence
Length = 1113
Score = 54.0 bits (27), Expect = 9e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 309 gataccgcgacaagtatcagcttcaccagaaggggaagattggaattctcctggatttcg 368
||||||| |||||||||||| | || |||||||||||||||||||| |||||||| |
Sbjct: 246 gataccggcacaagtatcagcatatacaaaaggggaagattggaattcttctggattttg 305
Query: 369 tgtggta 375
| |||||
Sbjct: 306 tctggta 312
>dbj|AK069177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006J10, full
insert sequence
Length = 1833
Score = 54.0 bits (27), Expect = 9e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 309 gataccgcgacaagtatcagcttcaccagaaggggaagattggaattctcctggatttcg 368
||||||| |||||||||||| | || |||||||||||||||||||| |||||||| |
Sbjct: 947 gataccggcacaagtatcagcatatacaaaaggggaagattggaattcttctggattttg 1006
Query: 369 tgtggta 375
| |||||
Sbjct: 1007 tctggta 1013
>gb|AACV01001283.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001283, whole
genome shotgun sequence
Length = 12034
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 5338 aaggggaagattggaattcttctggattttgtctggta 5301
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 17838187 aaggggaagattggaattcttctggattttgtctggta 17838224
>ref|NM_193731.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1389
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 655 aaggggaagattggaattcttctggattttgtctggta 692
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 756419 aaggggaagattggaattcttctggattttgtctggta 756456
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0455H03
Length = 175947
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 6592 aaggggaagattggaattcttctggattttgtctggta 6629
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBa0094H06
Length = 147245
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 141005 aaggggaagattggaattcttctggattttgtctggta 141042
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003
genomic scaffold, whole genome shotgun sequence
Length = 8539496
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 759065 aaggggaagattggaattcttctggattttgtctggta 759102
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 17384188 aaggggaagattggaattcttctggattttgtctggta 17384225
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 338 aaggggaagattggaattctcctggatttcgtgtggta 375
|||||||||||||||||||| |||||||| || |||||
Sbjct: 17759470 aaggggaagattggaattcttctggattttgtctggta 17759507
>gb|AQ273257.1|AQ273257 nbxb0029H15f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0029H15f, DNA sequence
Length = 729
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 143 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 195
>gb|AQ329439.1|AQ329439 nbxb0045A19r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0045A19r, DNA sequence
Length = 686
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 144 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 196
>gb|CG408776.1|CG408776 Ds469 Ds insertion lines Oryza sativa (japonica cultivar-group)
genomic, DNA sequence
Length = 300
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 84 tgttggcatcaaccactacacctc-tttctacatgaa 119
>dbj|AK071372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094F17, full
insert sequence
Length = 1842
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 589 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 641
>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0065C16, from Chromosome 10, complete sequence
Length = 146391
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 73273 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 73221
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBb0093J20, from chromosome 3, complete sequence
Length = 148635
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 83510 tgttggcatcaaccactacacctc-tttctacatgaa 83475
Score = 44.1 bits (22), Expect = 0.085
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtac 481
||||||||||||||||| | ||| | ||||||||||||
Sbjct: 84596 ggttccttgaccccattatccatagtcggtacccgtac 84559
>gb|AACV01006514.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006514, whole
genome shotgun sequence
Length = 14109
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 4455 tgttggcatcaaccactacacctc-tttctacatgaa 4420
Score = 44.1 bits (22), Expect = 0.085
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtac 481
||||||||||||||||| | ||| | ||||||||||||
Sbjct: 5389 ggttccttgaccccattatccatagtcggtacccgtac 5352
>gb|AACV01021195.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021195, whole
genome shotgun sequence
Length = 17610
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 14493 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 14545
>ref|NM_195684.1| Oryza sativa (japonica cultivar-group) putative beta-glucosidase
(OSJNBa0065C16.15), mRNA
Length = 1548
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 547 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 599
>ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1671487
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 753396 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 753448
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 3036675 tgttggcatcaaccactacacctc-tttctacatgaa 3036640
Score = 44.1 bits (22), Expect = 0.085
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtac 481
||||||||||||||||| | ||| | ||||||||||||
Sbjct: 3037761 ggttccttgaccccattatccatagtcggtacccgtac 3037724
>gb|CH401251.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000088
genomic scaffold, whole genome shotgun sequence
Length = 1117668
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 547654 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 547706
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 11823522 tgttggcatcaaccactacacctc-tttctacatgaa 11823487
Score = 44.1 bits (22), Expect = 0.085
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtac 481
||||||||||||||||| | ||| | ||||||||||||
Sbjct: 11824456 ggttccttgaccccattatccatagtcggtacccgtac 11824419
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 7800550 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 7800602
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 12015884 tgttggcatcaaccactacacctc-tttctacatgaa 12015849
Score = 44.1 bits (22), Expect = 0.085
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtac 481
||||||||||||||||| | ||| | ||||||||||||
Sbjct: 12016818 ggttccttgaccccattatccatagtcggtacccgtac 12016781
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 11691178 tgttggcatcaaccactacacctc-tttctacatgaa 11691143
Score = 44.1 bits (22), Expect = 0.085
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtac 481
||||||||||||||||| | ||| | ||||||||||||
Sbjct: 11692264 ggttccttgaccccattatccatagtcggtacccgtac 11692227
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 8447517 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 8447569
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 50.1 bits (25), Expect = 0.001
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 562 tgttggcatcaaccactacacttcttttctacatgaa 598
||||||||||||||||||||| || ||||||||||||
Sbjct: 11694415 tgttggcatcaaccactacacctc-tttctacatgaa 11694380
Score = 44.1 bits (22), Expect = 0.085
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 444 ggttccttgaccccattgtacatggacggtacccgtac 481
||||||||||||||||| | ||| | ||||||||||||
Sbjct: 11695501 ggttccttgaccccattatccatagtcggtacccgtac 11695464
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacgagcc 165
|||||||| || || || |||||||||||| ||||| | ||||||||||||||
Sbjct: 8452616 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagcc 8452668
>gb|CF276027.1|CF276027 14ETL--01-A08.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-A08, mRNA sequence
Length = 572
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 13 caaatctctaccattatgacctcccattggcactccatga 52
|||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 509 caaacctctaccactatgacctaccattagcactccatga 548
>gb|AQ574428.1|AQ574428 nbxb0085B03f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0085B03f, DNA sequence
Length = 697
Score = 44.1 bits (22), Expect = 0.085
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 113 tgcttccacgcgttcggagacagggtgaagaactggtttaccttcaacga 162
|||||||| || || || |||||||||||| ||||| | |||||||||||
Sbjct: 143 tgcttccaggcatttggggacagggtgaagcactggatcaccttcaacga 192
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 606,901
Number of Sequences: 438736
Number of extensions: 606901
Number of successful extensions: 10646
Number of sequences better than 0.5: 49
Number of HSP's better than 0.5 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10189
Number of HSP's gapped (non-prelim): 443
length of query: 598
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 577
effective length of database: 2,791,206,460
effective search space: 1610526127420
effective search space used: 1610526127420
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)