BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3276111.2.1
(1393 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV720585.1|CV720585 YBH--01-C04.b1 Rice before heading y... 111 1e-021
dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA... 111 1e-021
dbj|AP005312.2| Oryza sativa (japonica cultivar-group) geno... 111 1e-021
dbj|AP005702.3| Oryza sativa (japonica cultivar-group) geno... 111 1e-021
gb|AACV01019835.1| Oryza sativa (japonica cultivar-group) c... 111 1e-021
ref|XM_450799.1| Oryza sativa (japonica cultivar-group), mRNA 111 1e-021
ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-... 111 1e-021
ref|NT_107082.1| Oryza sativa (japonica cultivar-group) 111 1e-021
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 111 1e-021
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 111 1e-021
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 111 1e-021
dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA... 103 3e-019
gb|AU166714.1|AU166714 AU166714 Rice callus (2001) Oryza sa... 80 4e-012
dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, c... 80 4e-012
gb|AC091089.1|AC091089 Oryza sativa (japonica cultivar-grou... 80 4e-012
ref|NT_107122.1| Oryza sativa (japonica cultivar-group) 80 4e-012
dbj|AP003380.3| Oryza sativa (japonica cultivar-group) geno... 80 4e-012
gb|AACV01002890.1| Oryza sativa (japonica cultivar-group) c... 80 4e-012
gb|AACV01007563.1| Oryza sativa (japonica cultivar-group) c... 80 4e-012
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 80 4e-012
ref|XM_463580.1| Oryza sativa (japonica cultivar-group), p... 80 4e-012
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 80 4e-012
dbj|AP006531.3| Oryza sativa (japonica cultivar-group) geno... 80 4e-012
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 80 4e-012
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 80 4e-012
gb|AC146913.2| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
gb|CB645294.1|CB645294 OSJNEb06O03.f OSJNEb Oryza sativa (j... 74 2e-010
gb|CB645295.1|CB645295 OSJNEb06O03.r OSJNEb Oryza sativa (j... 74 2e-010
gb|CB656442.1|CB656442 OSJNEc10M19.f OSJNEc Oryza sativa (j... 74 2e-010
gb|CV721364.1|CV721364 YBH--03-N16.b1 Rice before heading y... 74 2e-010
dbj|AP005711.1| Oryza sativa (japonica cultivar-group) chro... 74 2e-010
dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 gen... 74 2e-010
gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 ... 74 2e-010
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 74 2e-010
dbj|AP005396.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AACV01007933.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|AACV01020542.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA 74 2e-010
ref|NT_107186.1| Oryza sativa (japonica cultivar-group) 74 2e-010
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|AF377947.3| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|C19617.2|C19617 C19617 Rice panicle at ripening stage Or... 68 1e-008
gb|AU312209.1|AU312209 AU312209 Oryza sativa anther cDNA Or... 66 6e-008
gb|C98573.1|C98573 C98573 Rice panicle at flowering stage O... 64 2e-007
gb|C72645.1|C72645 C72645 Rice panicle at flowering stage O... 62 9e-007
gb|C98572.1|C98572 C98572 Rice panicle at flowering stage O... 62 9e-007
gb|AU063975.1|AU063975 AU063975 Rice panicle at flowering s... 62 9e-007
gb|AU063839.2|AU063839 AU063839 Rice panicle at flowering s... 62 9e-007
gb|AU162172.1|AU162172 AU162172 Rice panicle at flowering s... 62 9e-007
gb|CV721352.1|CV721352 YBH--03-M18.b1 Rice before heading y... 62 9e-007
gb|CV721980.1|CV721980 YBH--05-P17.b1 Rice before heading y... 62 9e-007
dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA... 62 9e-007
gb|AY335487.1| Oryza sativa (japonica cultivar-group) cyste... 62 9e-007
dbj|AK121482.1| Oryza sativa (japonica cultivar-group) cDNA... 62 9e-007
gb|AC129716.3| Oryza sativa (japonica cultivar-group) chrom... 62 9e-007
gb|AACV01010747.1| Oryza sativa (japonica cultivar-group) c... 62 9e-007
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 62 9e-007
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 62 9e-007
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 62 9e-007
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 62 9e-007
gb|CV720949.1|CV720949 YBH--02-G04.b1 Rice before heading y... 60 3e-006
dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA... 60 3e-006
dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
ref|NT_107115.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|AACV01022682.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease 60 3e-006
gb|AC145324.3| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CB645336.1|CB645336 OSJNEb06P02.r OSJNEb Oryza sativa (j... 58 1e-005
gb|CB650323.1|CB650323 OSJNEb14L09.r OSJNEb Oryza sativa (j... 58 1e-005
gb|AC108757.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AK064748.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC O... 58 1e-005
gb|AC130605.3| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AP004037.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC O... 58 1e-005
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|AC113332.2| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AC108500.3| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AACV01008740.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01010644.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01011286.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01012356.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01012493.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01020338.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01027990.1| Oryza sativa (japonica cultivar-group) C... 58 1e-005
ref|XM_474296.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|XM_474851.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 58 1e-005
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 58 1e-005
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 58 1e-005
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 58 1e-005
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CH401194.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CH401185.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromoso... 58 1e-005
emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromoso... 58 1e-005
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|AY781344.1| Oryza sativa (japonica cultivar-group) putat... 58 1e-005
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AU094043.1|AU094043 AU094043 Rice panicle at flowering s... 54 2e-004
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP003852.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01000451.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01001025.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01015030.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|NM_183998.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|NM_184000.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 54 2e-004
ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Oz... 54 2e-004
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP001633.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP002861.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|C98585.1|C98585 C98585 Rice panicle at flowering stage O... 52 8e-004
dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
dbj|AP003764.3| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
gb|AACV01001023.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
ref|NM_183997.1| Oryza sativa (japonica cultivar-group), p... 52 8e-004
ref|NM_184003.1| Oryza sativa (japonica cultivar-group), p... 52 8e-004
ref|NM_189456.1| Oryza sativa (japonica cultivar-group), p... 52 8e-004
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 52 8e-004
dbj|AP003277.2| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
gb|C72896.1|C72896 C72896 Rice panicle at flowering stage O... 50 0.003
gb|CA754531.1|CA754531 BR030001000_PLATE_A02_9_007.ab1 OA O... 50 0.003
dbj|AK071733.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC O... 50 0.003
ref|NT_107148.1| Oryza sativa (japonica cultivar-group) 50 0.003
dbj|AP002869.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP003143.2| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AACV01000934.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01008404.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01020548.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01024705.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NM_183860.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|XM_470991.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 50 0.003
dbj|AP006170.2| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|CH401275.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401182.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromoso... 50 0.003
gb|AU092094.1|AU092094 AU092094 Rice callus Oryza sativa (j... 48 0.013
gb|AU092283.1|AU092283 AU092283 Rice callus Oryza sativa (j... 48 0.013
gb|AU182034.1|AU182034 AU182034 Rice callus (2001) Oryza sa... 48 0.013
gb|CA997922.1|CA997922 S234C1_G02 Rice cold stress germinat... 48 0.013
gb|CF323898.1|CF323898 HDN--05-B01.g1 OsHDAC1-overexpressin... 48 0.013
gb|AC108760.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
dbj|AP004138.1| Oryza sativa (japonica cultivar-group) chro... 48 0.013
gb|AC108755.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|AC137594.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
dbj|AP006756.2| Oryza sativa (japonica cultivar-group) geno... 48 0.013
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 48 0.013
gb|AACV01001875.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
ref|NM_183859.1| Oryza sativa (japonica cultivar-group), p... 48 0.013
ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Oz... 48 0.013
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CL517549.1|CL517549 SAC1D01 Flanking Sequence Tag of Ory... 44 0.20
gb|C71861.1|C71861 C71861 Rice panicle at flowering stage O... 44 0.20
gb|C98628.1|C98628 C98628 Rice panicle at flowering stage O... 44 0.20
gb|AU057730.1|AU057730 AU057730 Oryza sativa mature leaf Ni... 44 0.20
gb|AU057731.1|AU057731 AU057731 Oryza sativa mature leaf Ni... 44 0.20
gb|AU070491.1|AU070491 AU070491 Rice green shoot Oryza sati... 44 0.20
gb|AU070651.1|AU070651 AU070651 Rice cDNA from young root O... 44 0.20
gb|AU108194.1|AU108194 AU108194 Rice cDNA from young root O... 44 0.20
gb|AU162034.1|AU162034 AU162034 Rice cDNA from young root O... 44 0.20
gb|CB641553.1|CB641553 OSJNEb01E04.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB641634.1|CB641634 OSJNEb01G03.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB644001.1|CB644001 OSJNEb05A05.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB647610.1|CB647610 OSJNEb10J18.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB648468.1|CB648468 OSJNEb11N19.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB649610.1|CB649610 OSJNEb13K08.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB649732.1|CB649732 OSJNEb13N08.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB650806.1|CB650806 OSJNEb15H11.r OSJNEb Oryza sativa (j... 44 0.20
gb|CB667976.1|CB667976 OSJNEd15J08.f OSJNEd Oryza sativa (j... 44 0.20
gb|CB675127.1|CB675127 OSJNEe10K09.f OSJNEe Oryza sativa (j... 44 0.20
gb|CB678060.1|CB678060 OSJNEe15J20.f OSJNEe Oryza sativa (j... 44 0.20
gb|CF306821.1|CF306821 HDA1--04-P01.g1 OsHDAC1-overexpressi... 44 0.20
gb|CV723743.1|CV723743 root--04-K05.g1 Rice root lambda pha... 44 0.20
dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) ... 44 0.20
dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AP003928.3| Oryza sativa (japonica cultivar-group) geno... 44 0.20
dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
gb|AACV01008720.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01010643.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01018980.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01020154.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01026937.1| Oryza sativa (japonica cultivar-group) C... 44 0.20
ref|XM_474291.1| Oryza sativa (japonica cultivar-group), p... 44 0.20
ref|XM_474825.1| Oryza sativa (japonica cultivar-group), p... 44 0.20
ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.20
ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.20
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 44 0.20
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromoso... 44 0.20
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 44 0.20
>gb|CV720585.1|CV720585 YBH--01-C04.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--01-C04, mRNA sequence
Length = 452
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 90 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 149
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 150 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 209
Query: 612 caac 615
||||
Sbjct: 210 caac 213
>dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N05, full
insert sequence
Length = 1419
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 558 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 617
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 618 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 677
Query: 612 caac 615
||||
Sbjct: 678 caac 681
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 964 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 1023
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 1024 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 1083
Query: 1015 gtcgg 1019
|||||
Sbjct: 1084 gtcgg 1088
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 339 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 385
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 719 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 768
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0505H05
Length = 152845
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 7121 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 7062
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 7061 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 7002
Query: 612 caac 615
||||
Sbjct: 7001 caac 6998
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 6715 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 6656
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 6655 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 6596
Query: 1015 gtcgg 1019
|||||
Sbjct: 6595 gtcgg 6591
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 7438 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 7392
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 6960 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 6911
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0027G10
Length = 184759
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 152914 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 152855
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 152854 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 152795
Query: 612 caac 615
||||
Sbjct: 152794 caac 152791
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 152508 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 152449
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 152448 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 152389
Query: 1015 gtcgg 1019
|||||
Sbjct: 152388 gtcgg 152384
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 153231 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 153185
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 152753 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 152704
>gb|AACV01019835.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019835, whole
genome shotgun sequence
Length = 35371
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 20499 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 20440
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 20439 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 20380
Query: 612 caac 615
||||
Sbjct: 20379 caac 20376
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 20093 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 20034
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 20033 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 19974
Query: 1015 gtcgg 1019
|||||
Sbjct: 19973 gtcgg 19969
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 20816 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 20770
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 20338 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 20289
>ref|XM_450799.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1419
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 558 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 617
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 618 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 677
Query: 612 caac 615
||||
Sbjct: 678 caac 681
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 964 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 1023
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 1024 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 1083
Query: 1015 gtcgg 1019
|||||
Sbjct: 1084 gtcgg 1088
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 339 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 385
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 719 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 768
>ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.55 mRNA
Length = 1882
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 566 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 625
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 626 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 685
Query: 612 caac 615
||||
Sbjct: 686 caac 689
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 972 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 1031
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 1032 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 1091
Query: 1015 gtcgg 1019
|||||
Sbjct: 1092 gtcgg 1096
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 347 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 393
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 727 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 776
>ref|NT_107082.1| Oryza sativa (japonica cultivar-group)
Length = 2185602
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 1478825 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 1478766
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 1478765 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 1478706
Query: 612 caac 615
||||
Sbjct: 1478705 caac 1478702
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 1478419 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 1478360
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 1478359 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 1478300
Query: 1015 gtcgg 1019
|||||
Sbjct: 1478299 gtcgg 1478295
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 1479142 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 1479096
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 1478664 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 1478615
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 2246939 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 2246880
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 2246879 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 2246820
Query: 612 caac 615
||||
Sbjct: 2246819 caac 2246816
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 11507453 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 11507409
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 2246533 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 2246474
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 2246473 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 2246414
Query: 1015 gtcgg 1019
|||||
Sbjct: 2246413 gtcgg 2246409
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 2247256 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 2247210
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 11507033 caagtactggatcatcaagaactcgtgggggaagaactggggcga 11506989
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 554 agctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 8484044 agctggtgtcgctgtcggagcaggagctcgtggactgcgac 8484004
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcag 576
|||| |||| |||||||||||| ||||||||||||||
Sbjct: 11579328 gatcgcgacggggaagctggtgacgctgtcggagcag 11579292
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 11507125 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 11507075
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 943 aagtactggctcgtcaagaactcgtggggg 972
||||||||| |||| |||||||||||||||
Sbjct: 8483622 aagtactggatcgtgaagaactcgtggggg 8483593
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| |||| ||||||||||||||
Sbjct: 6431709 caagtactggatcgttaagaactcgtgggg 6431738
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 2246778 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 2246729
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 11720750 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 11720691
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 11720690 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 11720631
Query: 612 caac 615
||||
Sbjct: 11720630 caac 11720627
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 20981264 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 20981220
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 11720344 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 11720285
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 11720284 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 11720225
Query: 1015 gtcgg 1019
|||||
Sbjct: 11720224 gtcgg 11720220
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 11721067 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 11721021
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 20980844 caagtactggatcatcaagaactcgtgggggaagaactggggcga 20980800
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 554 agctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 17957855 agctggtgtcgctgtcggagcaggagctcgtggactgcgac 17957815
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcag 576
|||| |||| |||||||||||| ||||||||||||||
Sbjct: 21053139 gatcgcgacggggaagctggtgacgctgtcggagcag 21053103
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 20980936 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 20980886
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 943 aagtactggctcgtcaagaactcgtggggg 972
||||||||| |||| |||||||||||||||
Sbjct: 17957433 aagtactggatcgtgaagaactcgtggggg 17957404
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| |||| ||||||||||||||
Sbjct: 15905520 caagtactggatcgttaagaactcgtgggg 15905549
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 11720589 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 11720540
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 111 bits (56), Expect = 1e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 12845137 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 12845078
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | ||||||||| ||| |||||||||||
Sbjct: 12845077 gaagctggtctctctgtcggagcagcagctggtggactgcgacagctatgacggcggctg 12845018
Query: 612 caac 615
||||
Sbjct: 12845017 caac 12845014
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 22051006 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 22050962
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 12844731 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 12844672
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 12844671 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 12844612
Query: 1015 gtcgg 1019
|||||
Sbjct: 12844611 gtcgg 12844607
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 12845454 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 12845408
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 22050584 caagtactggatcatcaagaactcgtgggggaagaactggggcga 22050540
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 554 agctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 18948725 agctggtgtcgctgtcggagcaggagctcgtggactgcgac 18948685
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcag 576
|||| |||| |||||||||||| ||||||||||||||
Sbjct: 22120144 gatcgcgacggggaagctggtgacgctgtcggagcag 22120108
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 554 agctggtgtcgctgtcggagcaggagct 581
|||||||||||||||| |||||||||||
Sbjct: 19683001 agctggtgtcgctgtcagagcaggagct 19682974
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 22050676 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 22050626
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| |||| ||||||||||||||
Sbjct: 22126354 caagtactggatcgttaagaactcgtgggg 22126325
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 943 aagtactggctcgtcaagaactcgtggggg 972
||||||||| |||| |||||||||||||||
Sbjct: 18948303 aagtactggatcgtgaagaactcgtggggg 18948274
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 12844976 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 12844927
>dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041D01, full
insert sequence
Length = 1882
Score = 103 bits (52), Expect = 3e-019
Identities = 106/124 (85%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| ||
Sbjct: 566 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacggg 625
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
||||||||| || |||||||||||| ||||| | || |||||| ||| |||||||||||
Sbjct: 626 gaagctggtctctctgtcggagcagcagctggtggaatgcgacagctatgacggcggctg 685
Query: 612 caac 615
||||
Sbjct: 686 caac 689
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 972 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 1031
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 1032 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 1091
Query: 1015 gtcgg 1019
|||||
Sbjct: 1092 gtcgg 1096
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 347 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 393
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 727 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 776
>gb|AU166714.1|AU166714 AU166714 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C30658, mRNA sequence
Length = 404
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 93
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds
Length = 1429
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 586
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 942 agtactggatcgtcaagaactcgtgggg 969
>gb|AC091089.1|AC091089 Oryza sativa (japonica cultivar-group) chromosome 1 clone P0497A05, ***
SEQUENCING IN PROGRESS ***, 2 ordered pieces
Length = 132928
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 51688 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 51727
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 52086 agtactggatcgtcaagaactcgtgggg 52113
>ref|NT_107122.1| Oryza sativa (japonica cultivar-group)
Length = 816751
Score = 79.8 bits (40), Expect = 4e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| |
Sbjct: 34367 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacgag 34426
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
|| |||||| || || ||||||||| ||||| | ||||||||| ||| ||||| |||||
Sbjct: 34427 gaggctggtctctctatcggagcagcagctggtggactgcgacagctatgacggtggctg 34486
Query: 612 caac 615
||||
Sbjct: 34487 caac 34490
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 31595 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 31641
Score = 44.1 bits (22), Expect = 0.20
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcg 1001
|||||||||| | ||| |||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct: 34819 caagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctacatccg 34878
Query: 1002 gatgcgccgcgacgtcgg 1019
||| | ||||||||||||
Sbjct: 34879 gattctccgcgacgtcgg 34896
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 34528 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 34577
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0497A05
Length = 130919
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 49713 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 49752
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 50111 agtactggatcgtcaagaactcgtgggg 50138
>gb|AACV01002890.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002890, whole
genome shotgun sequence
Length = 20508
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 10237
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 9878 agtactggatcgtcaagaactcgtgggg 9851
>gb|AACV01007563.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007563, whole
genome shotgun sequence
Length = 38828
Score = 79.8 bits (40), Expect = 4e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| |
Sbjct: 25388 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacgag 25447
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
|| |||||| || || ||||||||| ||||| | ||||||||| ||| ||||| |||||
Sbjct: 25448 gaggctggtctctctatcggagcagcagctggtggactgcgacagctatgacggtggctg 25507
Query: 612 caac 615
||||
Sbjct: 25508 caac 25511
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 22616 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 22662
Score = 44.1 bits (22), Expect = 0.20
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcg 1001
|||||||||| | ||| |||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct: 25840 caagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctacatccg 25899
Query: 1002 gatgcgccgcgacgtcgg 1019
||| | ||||||||||||
Sbjct: 25900 gattctccgcgacgtcgg 25917
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 25549 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 25598
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 39575941 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 39575980
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | ||| |||| |||||||| | | || ||||||| ||| ||| ||
Sbjct: 13829240 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 13829181
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||| | |||||||||||||||||||| | |||||||||
Sbjct: 13829180 ctgacgccgctgtcggagcaggagctggtggactgcgac 13829142
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | ||| |||| |||||||| | | || ||||||| ||| ||| ||
Sbjct: 13823581 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 13823640
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||| | |||||||||||||||||||| | |||||||||
Sbjct: 13823641 ctgacgccgctgtcggagcaggagctggtggactgcgac 13823679
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | |||||||| | |||||| | | | |||||||| ||| || ||
Sbjct: 6398261 tgctgggcgttcgcggcggcggcggccatcgaggggctgaacaagatcaggaccggcgag 6398320
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||| | || | |||||||||
Sbjct: 6398321 ctggtgtcgctgtcggagcaggtgatggtggactgcgac 6398359
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 565 ctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||| ||||||||||||
Sbjct: 42929290 ctgtcggagcaggagctcatcgactgcgac 42929319
Score = 52.0 bits (26), Expect = 8e-004
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| || |||||||||||||||||||||||| | || | |||||||||
Sbjct: 13840555 caagatcaagaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgac 13840612
Score = 52.0 bits (26), Expect = 8e-004
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| || |||||||||||||||||||||||| | || | |||||||||
Sbjct: 13819308 caagatcaagaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgac 13819251
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 886 aggatgaaccacgccatcaccgtcgtcggctac 918
||||||||||||||| ||||| |||||||||||
Sbjct: 12733638 aggatgaaccacgccgtcaccatcgtcggctac 12733670
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 554 agctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||||| | || | |||||||||
Sbjct: 12733294 agctggtgtcgctgtcggagcaggtgatggtggactgcgac 12733334
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 39576339 agtactggatcgtcaagaactcgtgggg 39576366
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 434 tcgactggaggtccaagggcgccgtcac 461
|||||||||||| |||||||||||||||
Sbjct: 12727171 tcgactggaggttcaagggcgccgtcac 12727144
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 434 tcgactggaggtccaagggcgccgtcac 461
|||||||||||| |||||||||||||||
Sbjct: 6393700 tcgactggaggtacaagggcgccgtcac 6393673
Score = 48.1 bits (24), Expect = 0.013
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 539 agatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||| ||| ||||||||| | |||| ||||||||||||||| | |||||||||
Sbjct: 6393503 agatcaggacggggaagctgacgccgctatcggagcaggagctggtggactgcgac 6393448
Score = 46.1 bits (23), Expect = 0.051
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcg 592
||||||| ||| ||| ||||| | |||||||||||||||||||| | |||||||
Sbjct: 12726981 aagatcaggacggggcagctgacgccgctgtcggagcaggagctggtggactgcg 12726927
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| ||| |||||||||||||||
Sbjct: 6398716 caagtactggatcgccaagaactcgtgggg 6398745
>ref|XM_463580.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1116
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 573
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 932 agtactggatcgtcaagaactcgtgggg 959
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 14023324 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 14023363
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 14023722 agtactggatcgtcaagaactcgtgggg 14023749
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1417F08
Length = 155536
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 70285 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 70324
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 70683 agtactggatcgtcaagaactcgtgggg 70710
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 79.8 bits (40), Expect = 4e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| |
Sbjct: 12435112 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacgag 12435171
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
|| |||||| || || ||||||||| ||||| | ||||||||| ||| ||||| |||||
Sbjct: 12435172 gaggctggtctctctatcggagcagcagctggtggactgcgacagctatgacggtggctg 12435231
Query: 612 caac 615
||||
Sbjct: 12435232 caac 12435235
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 12432340 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 12432386
Score = 44.1 bits (22), Expect = 0.20
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcg 1001
|||||||||| | ||| |||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct: 12435564 caagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctacatccg 12435623
Query: 1002 gatgcgccgcgacgtcgg 1019
||| | ||||||||||||
Sbjct: 12435624 gattctccgcgacgtcgg 12435641
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 12435273 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 12435322
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 13766109 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 13766148
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 565 ctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||| ||||||||||||
Sbjct: 17015840 ctgtcggagcaggagctcatcgactgcgac 17015869
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 13766507 agtactggatcgtcaagaactcgtgggg 13766534
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 79.8 bits (40), Expect = 4e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| |
Sbjct: 26485819 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacgag 26485878
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
|| |||||| || || ||||||||| ||||| | ||||||||| ||| ||||| |||||
Sbjct: 26485879 gaggctggtctctctatcggagcagcagctggtggactgcgacagctatgacggtggctg 26485938
Query: 612 caac 615
||||
Sbjct: 26485939 caac 26485942
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 31651544 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 31651600
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 26483047 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 26483093
Score = 44.1 bits (22), Expect = 0.20
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcg 1001
|||||||||| | ||| |||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct: 26486271 caagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctacatccg 26486330
Query: 1002 gatgcgccgcgacgtcgg 1019
||| | ||||||||||||
Sbjct: 26486331 gattctccgcgacgtcgg 26486348
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 26485980 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 26486029
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 38967830 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 38967869
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | ||| |||| |||||||| | | || ||||||| ||| ||| ||
Sbjct: 13805697 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 13805638
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||| | |||||||||||||||||||| | |||||||||
Sbjct: 13805637 ctgacgccgctgtcggagcaggagctggtggactgcgac 13805599
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | |||||||| | |||||| | | | |||||||| ||| || ||
Sbjct: 6464171 tgctgggcgttcgcggcggcggcggccatcgaggggctgaacaagatcaggaccggcgag 6464230
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||| | || | |||||||||
Sbjct: 6464231 ctggtgtcgctgtcggagcaggtgatggtggactgcgac 6464269
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 565 ctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||| ||||||||||||
Sbjct: 42217561 ctgtcggagcaggagctcatcgactgcgac 42217590
Score = 52.0 bits (26), Expect = 8e-004
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| || |||||||||||||||||||||||| | || | |||||||||
Sbjct: 13792206 caagatcaagaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgac 13792263
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 886 aggatgaaccacgccatcaccgtcgtcggctac 918
||||||||||||||| ||||| |||||||||||
Sbjct: 12691575 aggatgaaccacgccgtcaccatcgtcggctac 12691607
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 554 agctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||||| | || | |||||||||
Sbjct: 12691231 agctggtgtcgctgtcggagcaggtgatggtggactgcgac 12691271
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 38968228 agtactggatcgtcaagaactcgtgggg 38968255
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 554 agctggtgtcgctgtcggagcaggagct 581
|||||||||||||||| |||||||||||
Sbjct: 24705433 agctggtgtcgctgtcagagcaggagct 24705460
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 434 tcgactggaggtccaagggcgccgtcac 461
|||||||||||| |||||||||||||||
Sbjct: 12685108 tcgactggaggttcaagggcgccgtcac 12685081
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 434 tcgactggaggtccaagggcgccgtcac 461
|||||||||||| |||||||||||||||
Sbjct: 6459610 tcgactggaggtacaagggcgccgtcac 6459583
Score = 48.1 bits (24), Expect = 0.013
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 539 agatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||| ||| ||||||||| | |||| ||||||||||||||| | |||||||||
Sbjct: 6459413 agatcaggacggggaagctgacgccgctatcggagcaggagctggtggactgcgac 6459358
Score = 46.1 bits (23), Expect = 0.051
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcg 592
||||||| ||| ||| ||||| | |||||||||||||||||||| | |||||||
Sbjct: 12684918 aagatcaggacggggcagctgacgccgctgtcggagcaggagctggtggactgcg 12684864
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| ||| |||||||||||||||
Sbjct: 6464626 caagtactggatcgccaagaactcgtgggg 6464655
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 79.8 bits (40), Expect = 4e-012
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 555 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||||||||||
Sbjct: 39495271 gctggtgtcgctgtcggagcaggagctgatcgactgcgac 39495310
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | ||| |||| |||||||| | | || ||||||| ||| ||| ||
Sbjct: 13831458 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 13831399
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||| | |||||||||||||||||||| | |||||||||
Sbjct: 13831398 ctgacgccgctgtcggagcaggagctggtggactgcgac 13831360
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | ||| |||| |||||||| | | || ||||||| ||| ||| ||
Sbjct: 13825799 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 13825858
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||| | |||||||||||||||||||| | |||||||||
Sbjct: 13825859 ctgacgccgctgtcggagcaggagctggtggactgcgac 13825897
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 496 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 555
|||||||| |||| | |||||||| | |||||| | | | |||||||| ||| || ||
Sbjct: 6400479 tgctgggcgttcgcggcggcggcggccatcgaggggctgaacaagatcaggaccggcgag 6400538
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||| | || | |||||||||
Sbjct: 6400539 ctggtgtcgctgtcggagcaggtgatggtggactgcgac 6400577
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 565 ctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||| ||||||||||||
Sbjct: 42848620 ctgtcggagcaggagctcatcgactgcgac 42848649
Score = 52.0 bits (26), Expect = 8e-004
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| || |||||||||||||||||||||||| | || | |||||||||
Sbjct: 13842773 caagatcaagaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgac 13842830
Score = 52.0 bits (26), Expect = 8e-004
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| || |||||||||||||||||||||||| | || | |||||||||
Sbjct: 13821526 caagatcaagaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgac 13821469
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 886 aggatgaaccacgccatcaccgtcgtcggctac 918
||||||||||||||| ||||| |||||||||||
Sbjct: 12735856 aggatgaaccacgccgtcaccatcgtcggctac 12735888
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 554 agctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||||||||||||| | || | |||||||||
Sbjct: 12735512 agctggtgtcgctgtcggagcaggtgatggtggactgcgac 12735552
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 944 agtactggctcgtcaagaactcgtgggg 971
|||||||| |||||||||||||||||||
Sbjct: 39495669 agtactggatcgtcaagaactcgtgggg 39495696
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 434 tcgactggaggtccaagggcgccgtcac 461
|||||||||||| |||||||||||||||
Sbjct: 12729389 tcgactggaggttcaagggcgccgtcac 12729362
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 434 tcgactggaggtccaagggcgccgtcac 461
|||||||||||| |||||||||||||||
Sbjct: 6395918 tcgactggaggtacaagggcgccgtcac 6395891
Score = 48.1 bits (24), Expect = 0.013
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 539 agatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||| ||| ||||||||| | |||| ||||||||||||||| | |||||||||
Sbjct: 6395721 agatcaggacggggaagctgacgccgctatcggagcaggagctggtggactgcgac 6395666
Score = 46.1 bits (23), Expect = 0.051
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcg 592
||||||| ||| ||| ||||| | |||||||||||||||||||| | |||||||
Sbjct: 12729199 aagatcaggacggggcagctgacgccgctgtcggagcaggagctggtggactgcg 12729145
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| ||| |||||||||||||||
Sbjct: 6400934 caagtactggatcgccaagaactcgtgggg 6400963
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 79.8 bits (40), Expect = 4e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| |
Sbjct: 12867031 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacgag 12867090
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
|| |||||| || || ||||||||| ||||| | ||||||||| ||| ||||| |||||
Sbjct: 12867091 gaggctggtctctctatcggagcagcagctggtggactgcgacagctatgacggtggctg 12867150
Query: 612 caac 615
||||
Sbjct: 12867151 caac 12867154
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 12864259 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 12864305
Score = 60.0 bits (30), Expect = 3e-006
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||| | ||||| |||||||||||||||||||| | |||||||||
Sbjct: 8299191 caagatcaagacggggaggttggtgacgctgtcggagcaggagctggtggactgcgac 8299134
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| |||||||||||||||||||
Sbjct: 8298368 caagtactggatcgtcaagaactcgtgggg 8298339
Score = 44.1 bits (22), Expect = 0.20
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcg 1001
|||||||||| | ||| |||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct: 12867483 caagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctacatccg 12867542
Query: 1002 gatgcgccgcgacgtcgg 1019
||| | ||||||||||||
Sbjct: 12867543 gattctccgcgacgtcgg 12867560
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 12867192 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 12867241
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0013C12 map near S6115, complete sequence
Length = 123718
Score = 79.8 bits (40), Expect = 4e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| |
Sbjct: 34367 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacgag 34426
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
|| |||||| || || ||||||||| ||||| | ||||||||| ||| ||||| |||||
Sbjct: 34427 gaggctggtctctctatcggagcagcagctggtggactgcgacagctatgacggtggctg 34486
Query: 612 caac 615
||||
Sbjct: 34487 caac 34490
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 31595 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 31641
Score = 44.1 bits (22), Expect = 0.20
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcg 1001
|||||||||| | ||| |||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct: 34819 caagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctacatccg 34878
Query: 1002 gatgcgccgcgacgtcgg 1019
||| | ||||||||||||
Sbjct: 34879 gattctccgcgacgtcgg 34896
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 34528 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 34577
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 79.8 bits (40), Expect = 4e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 492 tagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagg 551
|||||||||||| |||||||| |||||||| ||||||||| | | || ||||| ||| |
Sbjct: 12947238 tagctgctgggcgttcgtgacagcggcgaccatcgagagcctgaacatgatcaagacgag 12947297
Query: 552 gaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggctg 611
|| |||||| || || ||||||||| ||||| | ||||||||| ||| ||||| |||||
Sbjct: 12947298 gaggctggtctctctatcggagcagcagctggtggactgcgacagctatgacggtggctg 12947357
Query: 612 caac 615
||||
Sbjct: 12947358 caac 12947361
Score = 61.9 bits (31), Expect = 9e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 288 gctcggcgagaaccagttcgccgacctcacggaggaggagttcctgg 334
||||| ||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 12944466 gctcgccgagaacgagttcgcagacctcaccgaggaggagttcctgg 12944512
Score = 60.0 bits (30), Expect = 3e-006
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||| | ||||| |||||||||||||||||||| | |||||||||
Sbjct: 8369954 caagatcaagacggggaggttggtgacgctgtcggagcaggagctggtggactgcgac 8369897
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| |||||||||||||||||||
Sbjct: 8369131 caagtactggatcgtcaagaactcgtgggg 8369102
Score = 44.1 bits (22), Expect = 0.20
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcg 1001
|||||||||| | ||| |||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct: 12947690 caagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctacatccg 12947749
Query: 1002 gatgcgccgcgacgtcgg 1019
||| | ||||||||||||
Sbjct: 12947750 gattctccgcgacgtcgg 12947767
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 653 agaacggcgggctcaccaccgaggccaactacccgtaccaggcgcggcgg 702
||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 12947399 agaacggtggcctcaccacggaggcggactacccgtacacggcgcggcgg 12947448
>gb|CB645294.1|CB645294 OSJNEb06O03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O03 5', mRNA sequence
Length = 826
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 626 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 670
>gb|CB645295.1|CB645295 OSJNEb06O03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O03 3', mRNA sequence
Length = 783
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 745 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 701
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 323 caagtactggatcatcaagaactcgtgggggaagaactggggcga 279
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 415 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 365
>gb|CB656442.1|CB656442 OSJNEc10M19.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10M19 5', mRNA sequence
Length = 788
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 473 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 529
>gb|CV721364.1|CV721364 YBH--03-N16.b1 Rice before heading yeast two hybrid lambda phage cDNA
library (YBH) Oryza sativa (japonica cultivar-group) cDNA
clone YBH--03-N16, mRNA sequence
Length = 320
Score = 73.8 bits (37), Expect = 2e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 895 cacgccatcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctc 954
|||||| ||||||||||||| |||||| ||||| | || || ||| |||||||||| |
Sbjct: 126 cacgccgtcaccgtcgtcgggtacggcaccgacgcgtcttccggcgccaagtactggacc 185
Query: 955 gtcaagaactcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgac 1014
|||||||||| ||||| ||| |||||||||||||| ||| | ||||| | |||||||
Sbjct: 186 atcaagaactcatggggccagtcatggggcgagcgcggctacatccggattctccgcgac 245
Query: 1015 gtcgg 1019
|||||
Sbjct: 246 gtcgg 250
>dbj|AP005711.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone P0646H10, ***
SEQUENCING IN PROGRESS ***
Length = 152406
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 116409 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 116453
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 116831 caagtactggatcatcaagaactcgtgggggaagaactggggcga 116875
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcag 576
|||| |||| |||||||||||| ||||||||||||||
Sbjct: 47293 gatcgcgacggggaagctggtgacgctgtcggagcag 47329
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 116739 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 116789
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| |||| ||||||||||||||
Sbjct: 40254 caagtactggatcgttaagaactcgtgggg 40283
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full
insert sequence
Length = 904
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 151 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 195
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 573 caagtactggatcatcaagaactcgtgggggaagaactggggcga 617
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 481 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 531
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
sequence
Length = 128294
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 40552 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 40608
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
sequence
Length = 157970
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 30539 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 30483
>ref|NT_107078.1| Oryza sativa (japonica cultivar-group)
Length = 747721
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 181723 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 181679
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 181301 caagtactggatcatcaagaactcgtgggggaagaactggggcga 181257
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcag 576
|||| |||| |||||||||||| ||||||||||||||
Sbjct: 250861 gatcgcgacggggaagctggtgacgctgtcggagcag 250825
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 181393 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 181343
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggg 971
|||||||||| |||| ||||||||||||||
Sbjct: 257071 caagtactggatcgttaagaactcgtgggg 257042
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0635G10
Length = 146728
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 93070 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 93026
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 92648 caagtactggatcatcaagaactcgtgggggaagaactggggcga 92604
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 92740 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 92690
>gb|AACV01007933.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007933, whole
genome shotgun sequence
Length = 33153
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 29592 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 29648
>gb|AACV01020542.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020542, whole
genome shotgun sequence
Length = 11891
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1528 gggaagctggtgtcactgtcggagcaggagctggtcgactgcgac 1484
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcga 986
|||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 1108 caagtactggatcatcaagaactcgtgggggaagaactggggcga 1064
Score = 46.1 bits (23), Expect = 0.051
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggc 921
|||| ||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 1200 gggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggc 1150
>ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1460
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 562 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 618
>ref|NT_107186.1| Oryza sativa (japonica cultivar-group)
Length = 215173
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 127432 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 127488
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 4385381 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 4385437
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 30823275 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 30823331
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 30731851 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 30731907
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
OSJNBa0032E21, complete sequence
Length = 137580
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 71932 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgcgac 71876
>gb|C19617.2|C19617 C19617 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10684_1A, mRNA sequence
Length = 307
Score = 67.9 bits (34), Expect = 1e-008
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 538 aagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgc 591
||||||| ||| ||| ||||||||||||||||||||||||||||| | ||||||
Sbjct: 124 aagatcaggacggggcagctggtgtcgctgtcggagcaggagctggtggactgc 177
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,018,936
Number of Sequences: 438736
Number of extensions: 4018936
Number of successful extensions: 39079
Number of sequences better than 0.5: 232
Number of HSP's better than 0.5 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33306
Number of HSP's gapped (non-prelim): 5770
length of query: 1393
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1372
effective length of database: 2,791,206,460
effective search space: 3829535263120
effective search space used: 3829535263120
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)