BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230358.2.1
(2136 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA... 797 0.0
ref|XM_472733.1| Oryza sativa (japonica cultivar-group), p... 797 0.0
gb|AY652735.1| Oryza sativa (japonica cultivar-group) somat... 789 0.0
dbj|AK061767.1| Oryza sativa (japonica cultivar-group) cDNA... 537 e-150
dbj|AK105892.1| Oryza sativa (japonica cultivar-group) cDNA... 537 e-150
gb|CB671818.1|CB671818 OSJNEe05J02.f OSJNEe Oryza sativa (j... 323 2e-085
gb|AACV01009903.1| Oryza sativa (japonica cultivar-group) c... 307 1e-080
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 307 1e-080
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 307 1e-080
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 307 1e-080
emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromoso... 307 1e-080
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 307 1e-080
gb|CB671776.1|CB671776 OSJNEe05I05.f OSJNEe Oryza sativa (j... 303 2e-079
dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA... 293 2e-076
ref|XM_480325.1| Oryza sativa (japonica cultivar-group), mRNA 293 2e-076
dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSE... 293 2e-076
gb|CB671777.1|CB671777 OSJNEe05I05.r OSJNEe Oryza sativa (j... 280 3e-072
gb|CB671819.1|CB671819 OSJNEe05J02.r OSJNEe Oryza sativa (j... 242 7e-061
gb|CB669447.1|CB669447 OSJNEe01P02.f OSJNEe Oryza sativa (j... 198 9e-048
gb|CB638292.1|CB638292 OSJNEa06G22.f OSJNEa Oryza sativa (j... 167 3e-038
gb|AACV01017395.1| Oryza sativa (japonica cultivar-group) c... 155 1e-034
dbj|AP005164.3| Oryza sativa (japonica cultivar-group) geno... 155 1e-034
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 155 1e-034
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 155 1e-034
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 155 1e-034
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 155 1e-034
gb|BF889447.1|BF889447 EST016 Magnaporthe grisea infected 1... 149 7e-033
dbj|AB188248.1| Oryza sativa (japonica cultivar-group) ORK1... 115 1e-022
gb|D25047.1|D25047 RICR2976A Rice root Oryza sativa (japoni... 105 1e-019
dbj|AP004619.3| Oryza sativa (japonica cultivar-group) geno... 105 1e-019
dbj|AP003882.3| Oryza sativa (japonica cultivar-group) geno... 105 1e-019
gb|AACV01017402.1| Oryza sativa (japonica cultivar-group) c... 105 1e-019
dbj|AB188249.1| Oryza sativa (japonica cultivar-group) ORK1... 105 1e-019
gb|CB679880.1|CB679880 OSJNEf03P06.r OSJNEf Oryza sativa (j... 86 9e-014
dbj|AK060589.1| Oryza sativa (japonica cultivar-group) cDNA... 86 9e-014
dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA... 86 9e-014
ref|XM_480326.1| Oryza sativa (japonica cultivar-group), mRNA 86 9e-014
gb|CF322960.1|CF322960 HDN--02-I17.g1 OsHDAC1-overexpressin... 80 6e-012
gb|AU095162.1|AU095162 AU095162 Rice cDNA from immature lea... 78 2e-011
dbj|AP004874.1| Oryza sativa (japonica cultivar-group) chro... 78 2e-011
dbj|AK066118.1| Oryza sativa (japonica cultivar-group) cDNA... 78 2e-011
dbj|AK102120.1| Oryza sativa (japonica cultivar-group) cDNA... 78 2e-011
dbj|AP005533.3| Oryza sativa (japonica cultivar-group) geno... 78 2e-011
gb|AACV01003913.1| Oryza sativa (japonica cultivar-group) c... 78 2e-011
ref|XM_464966.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-011
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 78 2e-011
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 78 2e-011
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 78 2e-011
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 78 2e-011
gb|AZ133092.1|AZ133092 OSJNBb0108O22r CUGI Rice BAC Library... 74 3e-010
gb|CA754142.1|CA754142 BR040010000_PLATE_B09_66_076.ab1 OA ... 74 3e-010
gb|C22490.1|C22490 C22490 Rice panicle at flowering stage O... 70 5e-009
dbj|AK065224.1| Oryza sativa (japonica cultivar-group) cDNA... 70 5e-009
dbj|AK100258.1| Oryza sativa (japonica cultivar-group) cDNA... 70 5e-009
dbj|AP003513.2| Oryza sativa (japonica cultivar-group) geno... 70 5e-009
gb|AACV01013340.1| Oryza sativa (japonica cultivar-group) c... 70 5e-009
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 70 5e-009
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 70 5e-009
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 70 5e-009
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 70 5e-009
gb|CB645230.1|CB645230 OSJNEb06M17.f OSJNEb Oryza sativa (j... 64 3e-007
gb|AQ327980.1|AQ327980 nbxb0042M01f CUGI Rice BAC Library O... 58 2e-005
dbj|AG023349.1| Oryza sativa (japonica cultivar-group) DNA,... 50 0.005
dbj|AG023485.1| Oryza sativa (japonica cultivar-group) DNA,... 50 0.005
gb|CF309953.1|CF309953 ABF--04-F20.b1 ABF3-overexpressing t... 50 0.005
gb|AC136491.4| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
ref|NT_107094.1| Oryza sativa (japonica cultivar-group) chr... 50 0.005
gb|AACV01023215.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 50 0.005
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.020
dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.020
dbj|AP005284.3| Oryza sativa (japonica cultivar-group) geno... 48 0.020
dbj|AP005751.3| Oryza sativa (japonica cultivar-group) geno... 48 0.020
gb|AACV01005331.1| Oryza sativa (japonica cultivar-group) c... 48 0.020
gb|AACV01013543.1| Oryza sativa (japonica cultivar-group) c... 48 0.020
dbj|AP003044.1| Oryza sativa (japonica cultivar-group) geno... 48 0.020
dbj|AP005813.1| Oryza sativa (japonica cultivar-group) geno... 48 0.020
ref|NM_185793.1| Oryza sativa (japonica cultivar-group), p... 48 0.020
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 48 0.020
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.020
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.020
gb|AU071016.1|AU071016 AU071016 Rice cDNA from young root O... 46 0.079
gb|CB639106.1|CB639106 OSJNEa08G15.r OSJNEa Oryza sativa (j... 46 0.079
gb|CB642095.1|CB642095 OSJNEb02B14.f OSJNEb Oryza sativa (j... 46 0.079
gb|CB642096.1|CB642096 OSJNEb02B14.r OSJNEb Oryza sativa (j... 46 0.079
gb|CB644576.1|CB644576 OSJNEb05N16.r OSJNEb Oryza sativa (j... 46 0.079
gb|CB646984.1|CB646984 OSJNEb09L11.r OSJNEb Oryza sativa (j... 46 0.079
gb|CB652635.1|CB652635 OSJNEc02N13.r OSJNEc Oryza sativa (j... 46 0.079
gb|CB665539.1|CB665539 OSJNEd12A11.f OSJNEd Oryza sativa (j... 46 0.079
gb|CB665540.1|CB665540 OSJNEd12A11.r OSJNEd Oryza sativa (j... 46 0.079
gb|CB668881.1|CB668881 OSJNEd16P06.f OSJNEd Oryza sativa (j... 46 0.079
gb|CB669332.1|CB669332 OSJNEe01L21.r OSJNEe Oryza sativa (j... 46 0.079
gb|CB671658.1|CB671658 OSJNEe05F09.r OSJNEe Oryza sativa (j... 46 0.079
dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.079
dbj|AK111846.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.079
gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 ... 46 0.079
gb|AACV01000480.1| Oryza sativa (japonica cultivar-group) c... 46 0.079
gb|AACV01007734.1| Oryza sativa (japonica cultivar-group) c... 46 0.079
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.079
ref|XM_469439.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.079
ref|XM_469440.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.079
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 46 0.079
ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Oz... 46 0.079
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 46 0.079
dbj|AP001800.2| Oryza sativa (japonica cultivar-group) geno... 46 0.079
dbj|AP002835.1| Oryza sativa (japonica cultivar-group) geno... 46 0.079
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.079
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.079
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.079
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.079
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.079
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 46 0.079
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.079
gb|AC091670.7| Oryza sativa (japonica cultivar-group) chrom... 46 0.079
gb|AZ133119.1|AZ133119 OSJNBb0108D01f CUGI Rice BAC Library... 44 0.31
dbj|AG206057.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.31
gb|CB653945.1|CB653945 OSJNEc05H04.f OSJNEc Oryza sativa (j... 44 0.31
gb|CB655672.1|CB655672 OSJNEc09E22.f OSJNEc Oryza sativa (j... 44 0.31
dbj|AK071680.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.31
dbj|AK072306.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.31
dbj|AK072806.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.31
dbj|AK099424.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.31
dbj|AP005128.3| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AP005566.3| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AP005199.3| Oryza sativa (japonica cultivar-group) geno... 44 0.31
gb|AACV01000451.1| Oryza sativa (japonica cultivar-group) c... 44 0.31
gb|AACV01017077.1| Oryza sativa (japonica cultivar-group) c... 44 0.31
gb|AACV01019648.1| Oryza sativa (japonica cultivar-group) c... 44 0.31
ref|XM_473686.1| Oryza sativa (japonica cultivar-group), p... 44 0.31
ref|XM_479631.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.31
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 44 0.31
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 44 0.31
ref|NM_188464.1| Oryza sativa (japonica cultivar-group), Oz... 44 0.31
dbj|AP001633.2| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AP002861.2| Oryza sativa (japonica cultivar-group) geno... 44 0.31
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.31
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.31
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.31
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.31
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.31
emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromoso... 44 0.31
emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromoso... 44 0.31
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 44 0.31
>dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095F19, full
insert sequence
Length = 2296
Score = 797 bits (402), Expect = 0.0
Identities = 975/1166 (83%)
Strand = Plus / Minus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 2088 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 2029
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 2028 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 1969
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 1968 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 1909
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 1908 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 1849
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 1848 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 1789
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|| ||||||||||| || || | ||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 1788 agccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatca 1729
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|||||||| || || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1728 aatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtc 1669
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
|||||||| ||||| || ||||| |||||||| ||||||||||| || || || ||||||
Sbjct: 1668 ttctcagaggacttcccagtagagaggtactcaggagcaatgtgtccgatcgtcccacga 1609
Query: 731 acagctgttgtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcaccc 790
|||||||| || ||||| || |||||||| |||||||| ||||| || || || ||||||
Sbjct: 1608 acagctgtggttacatgagtgtccttgtaatccataagtttggccagtccaaagtcaccc 1549
Query: 791 acaactgcctcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatg 850
|| |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1548 acgactgcctcaaaatcttcatccaacagaatatttgcagctttgacatcacgatgaatg 1489
Query: 851 attttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaatc 910
|| |||||||| || || || |||||||| || | |||||| ||||||||||| ||||||
Sbjct: 1488 atcttgggatcacaatggtcgtgcaagtaggacaatcctctggcagatcccagcgcaatc 1429
Query: 911 cgtcttcttggttcccagctaagaggtggctcagatggctgccgctctcgtaaacgtgat 970
|| |||||| || ||| ||| || || ||| ||||||||||||||| || ||||||
Sbjct: 1428 cgagttcttgtttgccattcaagcggcggatcatttggctgccgctctcgcaatcgtgat 1369
Query: 971 gccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcag 1030
|| |||||||| ||||||||||| || ||||| | |||| ||| ||||| ||||||||
Sbjct: 1368 gcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtcatgcaa 1309
Query: 1031 aaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtt 1090
|| ||||| || || || |||||| | |||||||||||||||||||| ||||| ||||||
Sbjct: 1308 aatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaacttctgtt 1249
Query: 1091 tggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaat 1150
|||||||| |||||||||||||| ||||| || ||||||| ||||||||||||||||||
Sbjct: 1248 tggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgctaccaac 1189
Query: 1151 gagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttc 1210
|||||||| || || || ||||||||||| |||||||| || |||||||| | ||| |||
Sbjct: 1188 gagccatctgccagtctacctttgtacacctttccaaagccacctcttcccagaatattc 1129
Query: 1211 ttgttactgaaattatcagttgcaacttgaagctcccgcaatgaaaactttttgagctga 1270
|| || || || |||||||| ||||||||||||||||| | ||| || | || || ||
Sbjct: 1128 ttattgctaaagttatcagtagcaacttgaagctcccggagtgagaatctcttaagttgg 1069
Query: 1271 ccaagatggacttctggatcctcctcggcaggaacatcgaagaaatgctcttcaggttta 1330
||||| || ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 1068 ccaaggtgcacttccggatcctcctcagcagggacatcaaagaagtgttcttcaggttta 1009
Query: 1331 cgacggcgccacattgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagca 1390
|| || |||||| ||||||| ||||||| ||||| ||||||| |||||| ||| | |||
Sbjct: 1008 cgccgccgccaccatgcaaatccaattgccggaaccgcaaacagcaatgcagcagctgca 949
Query: 1391 gcaacacctccagctattgctccagt 1416
|||||||||||||| |||||||||||
Sbjct: 948 gcaacacctccagcaattgctccagt 923
Score = 371 bits (187), Expect = 1e-099
Identities = 499/603 (82%)
Strand = Plus / Minus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 888 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 829
Query: 1514 gggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaaaaggagcca 1573
||||||||||||| | ||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 828 gggccacaaagatctttattattagcaaaacttataggggtaaagagtgaaaaggagcca 769
Query: 1574 gtcgatgggacttgtcctgagaggttgttgttcgagagatccagtacttggagagtggag 1633
|| || || || | ||||||||| ||||| || ||||||||||| ||||| ||||| | |
Sbjct: 768 gtagacggaacctctcctgagagattgttatttgagagatccagaacttgaagagtagtg 709
Query: 1634 atattggtcaaggatacgggaatcgggccaaccaagctattgttgttaagacgtaggaaa 1693
||||||||||||||| ||||| | ||| | || |||||||||||||| ||||||
Sbjct: 708 atattggtcaaggattttggaattgaaccagaaagactgttgttgttaagacgaaggaaa 649
Query: 1694 cgcagcttcactagattccccaggctgtcagggatattgccagagaagttgttcatatac 1753
|||||||| || | ||||| | | || || ||| |||| ||||||||||| ||
Sbjct: 648 cgcagcttgtagagttgccccaaggtttccggaataaaaccagtgaagttgttcaggtaa 589
Query: 1754 agatccaaactgaccaggttagtcaggttccccagttcagggggtattgtcccacttatg 1813
|||||||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||
Sbjct: 588 agatccaaactgaccaagttagttaagtttcccagttcattaggtattgtcccacttatg 529
Query: 1814 ttgttgctgtaaagctccaaatattggagatttttcagctggccaagttgtggcactaga 1873
||||||||||||||||||| |||||| |||||||||| ||| ||||| || || || |
Sbjct: 528 ttgttgctgtaaagctccagatattgcagatttttcaactgcccaagctggggaaccaat 469
Query: 1874 acgccagataattgtgcatttccaaggtcaactctgataacactgttatcgttgttacac 1933
| || || | ||||||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 468 gcacctgacagttgtgcatttccaagatcaactctgatcacgctgttgtcagggttacaa 409
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaagacattg 1993
|| |||||||||||||| |||||||| || |||||||||||||||||||||| ||||||
Sbjct: 408 gttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcagcacattg 349
Query: 1994 ttagcatctttcaagctctgacgcaggctgtacagggcatcaccctcggtgttggcgacg 2053
||||||||||||| || || ||||| || || |||||||||||||| ||||||||| ||
Sbjct: 348 ttagcatctttcagactttggcgcagactatatagggcatcaccctccgtgttggcgccg 289
Query: 2054 acc 2056
|||
Sbjct: 288 acc 286
>ref|XM_472733.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1887
Score = 797 bits (402), Expect = 0.0
Identities = 975/1166 (83%)
Strand = Plus / Minus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 1886 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 1827
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 1826 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 1767
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 1766 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 1707
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 1706 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 1647
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 1646 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 1587
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|| ||||||||||| || || | ||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 1586 agccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatca 1527
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|||||||| || || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1526 aatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtc 1467
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
|||||||| ||||| || ||||| |||||||| ||||||||||| || || || ||||||
Sbjct: 1466 ttctcagaggacttcccagtagagaggtactcaggagcaatgtgtccgatcgtcccacga 1407
Query: 731 acagctgttgtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcaccc 790
|||||||| || ||||| || |||||||| |||||||| ||||| || || || ||||||
Sbjct: 1406 acagctgtggttacatgagtgtccttgtaatccataagtttggccagtccaaagtcaccc 1347
Query: 791 acaactgcctcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatg 850
|| |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1346 acgactgcctcaaaatcttcatccaacagaatatttgcagctttgacatcacgatgaatg 1287
Query: 851 attttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaatc 910
|| |||||||| || || || |||||||| || | |||||| ||||||||||| ||||||
Sbjct: 1286 atcttgggatcacaatggtcgtgcaagtaggacaatcctctggcagatcccagcgcaatc 1227
Query: 911 cgtcttcttggttcccagctaagaggtggctcagatggctgccgctctcgtaaacgtgat 970
|| |||||| || ||| ||| || || ||| ||||||||||||||| || ||||||
Sbjct: 1226 cgagttcttgtttgccattcaagcggcggatcatttggctgccgctctcgcaatcgtgat 1167
Query: 971 gccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcag 1030
|| |||||||| ||||||||||| || ||||| | |||| ||| ||||| ||||||||
Sbjct: 1166 gcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtcatgcaa 1107
Query: 1031 aaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtt 1090
|| ||||| || || || |||||| | |||||||||||||||||||| ||||| ||||||
Sbjct: 1106 aatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaacttctgtt 1047
Query: 1091 tggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaat 1150
|||||||| |||||||||||||| ||||| || ||||||| ||||||||||||||||||
Sbjct: 1046 tggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgctaccaac 987
Query: 1151 gagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttc 1210
|||||||| || || || ||||||||||| |||||||| || |||||||| | ||| |||
Sbjct: 986 gagccatctgccagtctacctttgtacacctttccaaagccacctcttcccagaatattc 927
Query: 1211 ttgttactgaaattatcagttgcaacttgaagctcccgcaatgaaaactttttgagctga 1270
|| || || || |||||||| ||||||||||||||||| | ||| || | || || ||
Sbjct: 926 ttattgctaaagttatcagtagcaacttgaagctcccggagtgagaatctcttaagttgg 867
Query: 1271 ccaagatggacttctggatcctcctcggcaggaacatcgaagaaatgctcttcaggttta 1330
||||| || ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 866 ccaaggtgcacttccggatcctcctcagcagggacatcaaagaagtgttcttcaggttta 807
Query: 1331 cgacggcgccacattgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagca 1390
|| || |||||| ||||||| ||||||| ||||| ||||||| |||||| ||| | |||
Sbjct: 806 cgccgccgccaccatgcaaatccaattgccggaaccgcaaacagcaatgcagcagctgca 747
Query: 1391 gcaacacctccagctattgctccagt 1416
|||||||||||||| |||||||||||
Sbjct: 746 gcaacacctccagcaattgctccagt 721
Score = 371 bits (187), Expect = 1e-099
Identities = 499/603 (82%)
Strand = Plus / Minus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 686 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 627
Query: 1514 gggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaaaaggagcca 1573
||||||||||||| | ||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 626 gggccacaaagatctttattattagcaaaacttataggggtaaagagtgaaaaggagcca 567
Query: 1574 gtcgatgggacttgtcctgagaggttgttgttcgagagatccagtacttggagagtggag 1633
|| || || || | ||||||||| ||||| || ||||||||||| ||||| ||||| | |
Sbjct: 566 gtagacggaacctctcctgagagattgttatttgagagatccagaacttgaagagtagtg 507
Query: 1634 atattggtcaaggatacgggaatcgggccaaccaagctattgttgttaagacgtaggaaa 1693
||||||||||||||| ||||| | ||| | || |||||||||||||| ||||||
Sbjct: 506 atattggtcaaggattttggaattgaaccagaaagactgttgttgttaagacgaaggaaa 447
Query: 1694 cgcagcttcactagattccccaggctgtcagggatattgccagagaagttgttcatatac 1753
|||||||| || | ||||| | | || || ||| |||| ||||||||||| ||
Sbjct: 446 cgcagcttgtagagttgccccaaggtttccggaataaaaccagtgaagttgttcaggtaa 387
Query: 1754 agatccaaactgaccaggttagtcaggttccccagttcagggggtattgtcccacttatg 1813
|||||||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||
Sbjct: 386 agatccaaactgaccaagttagttaagtttcccagttcattaggtattgtcccacttatg 327
Query: 1814 ttgttgctgtaaagctccaaatattggagatttttcagctggccaagttgtggcactaga 1873
||||||||||||||||||| |||||| |||||||||| ||| ||||| || || || |
Sbjct: 326 ttgttgctgtaaagctccagatattgcagatttttcaactgcccaagctggggaaccaat 267
Query: 1874 acgccagataattgtgcatttccaaggtcaactctgataacactgttatcgttgttacac 1933
| || || | ||||||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 266 gcacctgacagttgtgcatttccaagatcaactctgatcacgctgttgtcagggttacaa 207
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaagacattg 1993
|| |||||||||||||| |||||||| || |||||||||||||||||||||| ||||||
Sbjct: 206 gttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcagcacattg 147
Query: 1994 ttagcatctttcaagctctgacgcaggctgtacagggcatcaccctcggtgttggcgacg 2053
||||||||||||| || || ||||| || || |||||||||||||| ||||||||| ||
Sbjct: 146 ttagcatctttcagactttggcgcagactatatagggcatcaccctccgtgttggcgccg 87
Query: 2054 acc 2056
|||
Sbjct: 86 acc 84
>gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic embryogenesis protein
kinase 1 mRNA, complete cds
Length = 2380
Score = 789 bits (398), Expect = 0.0
Identities = 974/1166 (83%)
Strand = Plus / Minus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 2006 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 1947
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || || ||||| || |||
Sbjct: 1946 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttttgccactcctcc 1887
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 1886 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 1827
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 1826 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 1767
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 1766 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 1707
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|| ||||||||||| || || | ||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 1706 agccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatca 1647
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|||||||| || || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1646 aatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtc 1587
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
|||||||| ||||| || ||||| |||||||| ||||||||||| || || || ||||||
Sbjct: 1586 ttctcagaggacttcccagtagagaggtactcaggagcaatgtgtccgatcgtcccacga 1527
Query: 731 acagctgttgtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcaccc 790
|||||||| || ||||| || |||||||| |||||||| ||||| || || || ||||||
Sbjct: 1526 acagctgtggttacatgagtgtccttgtaatccataagtttggccagtccaaagtcaccc 1467
Query: 791 acaactgcctcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatg 850
|| |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1466 acgactgcctcaaaatcttcatccaacagaatatttgcagctttgacatcacgatgaatg 1407
Query: 851 attttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaatc 910
|| |||||||| || || || |||||||| || | |||||| ||||||||||| ||||||
Sbjct: 1406 atcttgggatcacaatggtcgtgcaagtaggacaatcctctggcagatcccagcgcaatc 1347
Query: 911 cgtcttcttggttcccagctaagaggtggctcagatggctgccgctctcgtaaacgtgat 970
|| |||||| || ||| ||| || || ||| ||||||||||||||| || ||||||
Sbjct: 1346 cgagttcttgtttgccattcaagcggcggatcatttggctgccgctctcgcaatcgtgat 1287
Query: 971 gccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcag 1030
|| |||||||| ||||||||||| || ||||| | |||| ||| ||||| ||||||||
Sbjct: 1286 gcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtcatgcaa 1227
Query: 1031 aaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtt 1090
|| ||||| || || || |||||| | |||||||||||||||||||| ||||| ||||||
Sbjct: 1226 aatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaacttctgtt 1167
Query: 1091 tggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaat 1150
|||||||| |||||||||||||| ||||| || ||||||| ||||||||||||||||||
Sbjct: 1166 tggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgctaccaac 1107
Query: 1151 gagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttc 1210
|||||||| || || || ||||||||||| |||||||| || |||||||| | ||| |||
Sbjct: 1106 gagccatctgccagtctacctttgtacacctttccaaagccacctcttcccagaatattc 1047
Query: 1211 ttgttactgaaattatcagttgcaacttgaagctcccgcaatgaaaactttttgagctga 1270
|| || || || |||||||| ||||||||||||||||| | ||| || | || || ||
Sbjct: 1046 ttattgctaaagttatcagtagcaacttgaagctcccggagtgagaatctcttaagttgg 987
Query: 1271 ccaagatggacttctggatcctcctcggcaggaacatcgaagaaatgctcttcaggttta 1330
||||| || ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 986 ccaaggtgcacttccggatcctcctcagcagggacatcaaagaagtgttcttcaggttta 927
Query: 1331 cgacggcgccacattgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagca 1390
|| || |||||| ||||||| ||||||| ||||| ||||||| |||||| ||| | |||
Sbjct: 926 cgccgccgccaccatgcaaatccaattgccggaaccgcaaacagcaatgcagcagctgca 867
Query: 1391 gcaacacctccagctattgctccagt 1416
|||||||||||||| |||||||||||
Sbjct: 866 gcaacacctccagcaattgctccagt 841
Score = 371 bits (187), Expect = 1e-099
Identities = 499/603 (82%)
Strand = Plus / Minus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 806 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 747
Query: 1514 gggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaaaaggagcca 1573
||||||||||||| | ||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 746 gggccacaaagatctttattattagcaaaacttataggggtaaagagtgaaaaggagcca 687
Query: 1574 gtcgatgggacttgtcctgagaggttgttgttcgagagatccagtacttggagagtggag 1633
|| || || || | ||||||||| ||||| || ||||||||||| ||||| ||||| | |
Sbjct: 686 gtagacggaacctctcctgagagattgttatttgagagatccagaacttgaagagtagtg 627
Query: 1634 atattggtcaaggatacgggaatcgggccaaccaagctattgttgttaagacgtaggaaa 1693
||||||||||||||| ||||| | ||| | || |||||||||||||| ||||||
Sbjct: 626 atattggtcaaggattttggaattgaaccagaaagactgttgttgttaagacgaaggaaa 567
Query: 1694 cgcagcttcactagattccccaggctgtcagggatattgccagagaagttgttcatatac 1753
|||||||| || | ||||| | | || || ||| |||| ||||||||||| ||
Sbjct: 566 cgcagcttgtagagttgccccaaggtttccggaataaaaccagtgaagttgttcaggtaa 507
Query: 1754 agatccaaactgaccaggttagtcaggttccccagttcagggggtattgtcccacttatg 1813
|||||||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||
Sbjct: 506 agatccaaactgaccaagttagttaagtttcccagttcattaggtattgtcccacttatg 447
Query: 1814 ttgttgctgtaaagctccaaatattggagatttttcagctggccaagttgtggcactaga 1873
||||||||||||||||||| |||||| |||||||||| ||| ||||| || || || |
Sbjct: 446 ttgttgctgtaaagctccagatattgcagatttttcaactgcccaagctggggaaccaat 387
Query: 1874 acgccagataattgtgcatttccaaggtcaactctgataacactgttatcgttgttacac 1933
| || || | ||||||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 386 gcacctgacagttgtgcatttccaagatcaactctgatcacgctgttgtcagggttacaa 327
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaagacattg 1993
|| |||||||||||||| |||||||| || |||||||||||||||||||||| ||||||
Sbjct: 326 gttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcagcacattg 267
Query: 1994 ttagcatctttcaagctctgacgcaggctgtacagggcatcaccctcggtgttggcgacg 2053
||||||||||||| || || ||||| || || |||||||||||||| ||||||||| ||
Sbjct: 266 ttagcatctttcagactttggcgcagactatatagggcatcaccctccgtgttggcgccg 207
Query: 2054 acc 2056
|||
Sbjct: 206 acc 204
>dbj|AK061767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B11, full
insert sequence
Length = 1161
Score = 537 bits (271), Expect = e-150
Identities = 688/827 (83%)
Strand = Plus / Minus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 831 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 772
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 771 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 712
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 711 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 652
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 651 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 592
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 591 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 532
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|| ||||||||||| || || | ||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 531 agccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatca 472
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|||||||| || || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 471 aatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtc 412
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
|||||||| ||||| || ||||| |||||||| ||||||||||| || || || ||||||
Sbjct: 411 ttctcagaggacttcccagtagagaggtactcaggagcaatgtgtccgatcgtcccacga 352
Query: 731 acagctgttgtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcaccc 790
|||||||| || ||||| || |||||||| |||||||| ||||| || || || ||||||
Sbjct: 351 acagctgtggttacatgagtgtccttgtaatccataagtttggccagtccaaagtcaccc 292
Query: 791 acaactgcctcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatg 850
|| |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 291 acgactgcctcaaaatcttcatccaacagaatatttgcagctttgacatcacgatgaatg 232
Query: 851 attttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaatc 910
|| |||||||| || || || |||||||| || | |||||| ||||||||||| ||||||
Sbjct: 231 atcttgggatcacaatggtcgtgcaagtaggacaatcctctggcagatcccagcgcaatc 172
Query: 911 cgtcttcttggttcccagctaagaggtggctcagatggctgccgctctcgtaaacgtgat 970
|| |||||| || ||| ||| || || ||| ||||||||||||||| || ||||||
Sbjct: 171 cgagttcttgtttgccattcaagcggcggatcatttggctgccgctctcgcaatcgtgat 112
Query: 971 gccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcag 1030
|| |||||||| ||||||||||| || ||||| | |||| ||| ||||| ||||||||
Sbjct: 111 gcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtcatgcaa 52
Query: 1031 aaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcat 1077
|| ||||| || || || |||||| | ||||||||||||||||||||
Sbjct: 51 aatccacggagccgaagcaggttcctatgcaccgccatgctaatcat 5
>dbj|AK105892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E09, full
insert sequence
Length = 1161
Score = 537 bits (271), Expect = e-150
Identities = 688/827 (83%)
Strand = Plus / Minus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 831 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 772
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 771 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 712
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 711 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 652
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 651 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 592
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 591 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 532
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|| ||||||||||| || || | ||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 531 agccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatca 472
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|||||||| || || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 471 aatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtc 412
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
|||||||| ||||| || ||||| |||||||| ||||||||||| || || || ||||||
Sbjct: 411 ttctcagaggacttcccagtagagaggtactcaggagcaatgtgtccgatcgtcccacga 352
Query: 731 acagctgttgtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcaccc 790
|||||||| || ||||| || |||||||| |||||||| ||||| || || || ||||||
Sbjct: 351 acagctgtggttacatgagtgtccttgtaatccataagtttggccagtccaaagtcaccc 292
Query: 791 acaactgcctcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatg 850
|| |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 291 acgactgcctcaaaatcttcatccaacagaatatttgcagctttgacatcacgatgaatg 232
Query: 851 attttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaatc 910
|| |||||||| || || || |||||||| || | |||||| ||||||||||| ||||||
Sbjct: 231 atcttgggatcacaatggtcgtgcaagtaggacaatcctctggcagatcccagcgcaatc 172
Query: 911 cgtcttcttggttcccagctaagaggtggctcagatggctgccgctctcgtaaacgtgat 970
|| |||||| || ||| ||| || || ||| ||||||||||||||| || ||||||
Sbjct: 171 cgagttcttgtttgccattcaagcggcggatcatttggctgccgctctcgcaatcgtgat 112
Query: 971 gccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcag 1030
|| |||||||| ||||||||||| || ||||| | |||| ||| ||||| ||||||||
Sbjct: 111 gcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtcatgcaa 52
Query: 1031 aaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcat 1077
|| ||||| || || || |||||| | ||||||||||||||||||||
Sbjct: 51 aatccacggagccgaagcaggttcctatgcaccgccatgctaatcat 5
>gb|CB671818.1|CB671818 OSJNEe05J02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05J02 5', mRNA sequence
Length = 784
Score = 323 bits (163), Expect = 2e-085
Identities = 430/519 (82%)
Strand = Plus / Minus
Query: 1538 gcaaaacttataggggtgaagagtgaaaaggagccagtcgatgggacttgtcctgagagg 1597
||||||||||||||||| |||||||||||||||||||| || || || | |||||||||
Sbjct: 769 gcaaaacttataggggtaaagagtgaaaaggagccagtagacggaacctctcctgagaga 710
Query: 1598 ttgttgttcgagagatccagtacttggagagtggagatattggtcaaggatacgggaatc 1657
||||| || ||||||||||| ||||| ||||| | |||||||||||||||| |||||
Sbjct: 709 ttgttatttgagagatccagaacttgaagagtagtgatattggtcaaggattttggaatt 650
Query: 1658 gggccaaccaagctattgttgttaagacgtaggaaacgcagcttcactagattccccagg 1717
| ||| | || |||||||||||||| |||||||||||||| || | ||||| |
Sbjct: 649 gaaccagaaagactgttgttgttaagacgaaggaaacgcagcttgtagagttgccccaag 590
Query: 1718 ctgtcagggatattgccagagaagttgttcatatacagatccaaactgaccaggttagtc 1777
| || || ||| |||| ||||||||||| || |||||||||||||||| ||||||
Sbjct: 589 gtttccggaataaaaccagtgaagttgttcaggtaaagatccaaactgaccaagttagtt 530
Query: 1778 aggttccccagttcagggggtattgtcccacttatgttgttgctgtaaagctccaaatat 1837
| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 529 aagtttcccagttcattaggtattgtcccacttatgttgttgctgtaaagctccagatat 470
Query: 1838 tggagatttttcagctggccaagttgtggcactagaacgccagataattgtgcatttcca 1897
|| |||||||||| ||| ||||| || || || | | || || | |||||||||||||
Sbjct: 469 tgcagatttttcaactgcccaagctggggaaccaatgcacctgacagttgtgcatttcca 410
Query: 1898 aggtcaactctgataacactgttatcgttgttacacgtaacatggaaccatgtacatgga 1957
|| ||||||||||| || ||||| || |||||| || |||||||||||||| ||||||
Sbjct: 409 agatcaactctgatcacgctgttgtcagggttacaagttacatggaaccatgtgcatgga 350
Query: 1958 ttaacaagagtgggatcccaactctgcaagacattgttagcatctttcaagctctgacgc 2017
|| || |||||||||||||||||||||| ||||||||||||||||||| || || |||
Sbjct: 349 ttgaccagagtgggatcccaactctgcagcacattgttagcatctttcagactttggcgc 290
Query: 2018 aggctgtacagggcatcaccctcggtgttggcgacgacc 2056
|| || || |||||||||||||| ||||||||| |||||
Sbjct: 289 agactatatagggcatcaccctccgtgttggcgccgacc 251
>gb|AACV01009903.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009903, whole
genome shotgun sequence
Length = 23971
Score = 307 bits (155), Expect = 1e-080
Identities = 290/335 (86%)
Strand = Plus / Minus
Query: 578 acatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaataagctcc 637
||||| ||||| |||||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 5777 acatcatcatcgtttgcaagacgagcaagatcaaatgccctttgtcctgtaatgagctca 5718
Query: 638 agaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggtagatagg 697
||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 5717 agaagcatgattccatagccaaaaacatcagtcttctcagaggacttcccagtagagagg 5658
Query: 698 tactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggtatccttg 757
||||| ||||||||||| || || || |||||||||||||| || ||||| || ||||||
Sbjct: 5657 tactcaggagcaatgtgtccgatcgtcccacgaacagctgtggttacatgagtgtccttg 5598
Query: 758 tagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctcatccaaa 817
|| |||||||| ||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 5597 taatccataagtttggccagtccaaagtcacccacgactgcctcaaaatcttcatccaac 5538
Query: 818 agaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaag 877
||||||||||||||||||||||| ||||| ||||| |||||||| || || || ||||||
Sbjct: 5537 agaatatttgcagctttgacatcacgatgaatgatcttgggatcacaatggtcgtgcaag 5478
Query: 878 taagaaagtcctcttgcagatcccagtgcaatccg 912
|| || | |||||| ||||||||||| ||||||||
Sbjct: 5477 taggacaatcctctggcagatcccagcgcaatccg 5443
Score = 238 bits (120), Expect = 1e-059
Identities = 243/284 (85%)
Strand = Plus / Minus
Query: 965 cgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtc 1024
|||||||| |||||||| ||||||||||| || ||||| | |||| ||| ||||| |||
Sbjct: 5061 cgtgatgcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtc 5002
Query: 1025 atgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacc 1084
||||| || ||||| || || || |||||| | |||||||||||||||||||| |||||
Sbjct: 5001 atgcaaaatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaact 4942
Query: 1085 tctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgct 1144
|||||||||||||| |||||||||||||| ||||| || ||||||| |||||||||||||
Sbjct: 4941 tctgtttggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgct 4882
Query: 1145 accaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaa 1204
||||| |||||||| || || || ||||||||||| |||||||| || |||||||| | |
Sbjct: 4881 accaacgagccatctgccagtctacctttgtacacctttccaaagccacctcttcccaga 4822
Query: 1205 atgttcttgttactgaaattatcagttgcaacttgaagctcccg 1248
|| ||||| || || || |||||||| |||||||||||||||||
Sbjct: 4821 atattcttattgctaaagttatcagtagcaacttgaagctcccg 4778
Score = 167 bits (84), Expect = 3e-038
Identities = 255/312 (81%)
Strand = Plus / Minus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 6463 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 6404
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 6403 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 6344
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 6343 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 6284
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 6283 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 6224
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 6223 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 6164
Query: 551 agtcctttcacc 562
|| |||||||||
Sbjct: 6163 agccctttcacc 6152
Score = 109 bits (55), Expect = 6e-021
Identities = 88/99 (88%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 3778 ccagtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttca 3719
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||||||||||||||||||||||||||||||||||
Sbjct: 3718 ttaggtattgtcccacttatgttgttgctgtaaagctcc 3680
Score = 109 bits (55), Expect = 6e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 1927 gttacacgtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaa 1986
|||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 3282 gttacaagttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcag 3223
Query: 1987 gacattgttagcatctttcaagctctgacgcaggctgtacagggcatcacc 2037
||||||||||||||||||| || || ||||| || || |||||||||||
Sbjct: 3222 cacattgttagcatctttcagactttggcgcagactatatagggcatcacc 3172
Score = 107 bits (54), Expect = 3e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 1299 caggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaattg 1358
|||| ||||| ||||| || |||||||||||||| || |||||| ||||||| ||||||
Sbjct: 4647 cagggacatcaaagaagtgttcttcaggtttacgccgccgccaccatgcaaatccaattg 4588
Query: 1359 caggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
| ||||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||
Sbjct: 4587 ccggaaccgcaaacagcaatgcagcagctgcagcaacacctccagcaattgctccagt 4530
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1544 cttataggggtgaagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttg 1603
||||||||||| |||||||||||||||||||| || || || | ||||||||| |||||
Sbjct: 4205 cttataggggtaaagagtgaaaaggagccagtagacggaacctctcctgagagattgtta 4146
Query: 1604 ttcgagagatcc 1615
|| |||||||||
Sbjct: 4145 tttgagagatcc 4134
Score = 65.9 bits (33), Expect = 9e-008
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 4376 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 4317
Query: 1514 gggccacaaagat 1526
|||||||||||||
Sbjct: 4316 gggccacaaagat 4304
>ref|NT_079863.2| Oryza sativa (japonica cultivar-group)
Length = 2656602
Score = 307 bits (155), Expect = 1e-080
Identities = 290/335 (86%)
Strand = Plus / Plus
Query: 578 acatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaataagctcc 637
||||| ||||| |||||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 446777 acatcatcatcgtttgcaagacgagcaagatcaaatgccctttgtcctgtaatgagctca 446836
Query: 638 agaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggtagatagg 697
||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 446837 agaagcatgattccatagccaaaaacatcagtcttctcagaggacttcccagtagagagg 446896
Query: 698 tactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggtatccttg 757
||||| ||||||||||| || || || |||||||||||||| || ||||| || ||||||
Sbjct: 446897 tactcaggagcaatgtgtccgatcgtcccacgaacagctgtggttacatgagtgtccttg 446956
Query: 758 tagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctcatccaaa 817
|| |||||||| ||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 446957 taatccataagtttggccagtccaaagtcacccacgactgcctcaaaatcttcatccaac 447016
Query: 818 agaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaag 877
||||||||||||||||||||||| ||||| ||||| |||||||| || || || ||||||
Sbjct: 447017 agaatatttgcagctttgacatcacgatgaatgatcttgggatcacaatggtcgtgcaag 447076
Query: 878 taagaaagtcctcttgcagatcccagtgcaatccg 912
|| || | |||||| ||||||||||| ||||||||
Sbjct: 447077 taggacaatcctctggcagatcccagcgcaatccg 447111
Score = 238 bits (120), Expect = 1e-059
Identities = 243/284 (85%)
Strand = Plus / Plus
Query: 965 cgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtc 1024
|||||||| |||||||| ||||||||||| || ||||| | |||| ||| ||||| |||
Sbjct: 447493 cgtgatgcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtc 447552
Query: 1025 atgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacc 1084
||||| || ||||| || || || |||||| | |||||||||||||||||||| |||||
Sbjct: 447553 atgcaaaatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaact 447612
Query: 1085 tctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgct 1144
|||||||||||||| |||||||||||||| ||||| || ||||||| |||||||||||||
Sbjct: 447613 tctgtttggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgct 447672
Query: 1145 accaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaa 1204
||||| |||||||| || || || ||||||||||| |||||||| || |||||||| | |
Sbjct: 447673 accaacgagccatctgccagtctacctttgtacacctttccaaagccacctcttcccaga 447732
Query: 1205 atgttcttgttactgaaattatcagttgcaacttgaagctcccg 1248
|| ||||| || || || |||||||| |||||||||||||||||
Sbjct: 447733 atattcttattgctaaagttatcagtagcaacttgaagctcccg 447776
Score = 167 bits (84), Expect = 3e-038
Identities = 255/312 (81%)
Strand = Plus / Plus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 446091 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 446150
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 446151 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 446210
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 446211 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 446270
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 446271 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 446330
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 446331 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 446390
Query: 551 agtcctttcacc 562
|| |||||||||
Sbjct: 446391 agccctttcacc 446402
Score = 109 bits (55), Expect = 6e-021
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 1927 gttacacgtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaa 1986
|||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 449272 gttacaagttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcag 449331
Query: 1987 gacattgttagcatctttcaagctctgacgcaggctgtacagggcatcacc 2037
||||||||||||||||||| || || ||||| || || |||||||||||
Sbjct: 449332 cacattgttagcatctttcagactttggcgcagactatatagggcatcacc 449382
Score = 109 bits (55), Expect = 6e-021
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 448776 ccagtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttca 448835
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||||||||||||||||||||||||||||||||||
Sbjct: 448836 ttaggtattgtcccacttatgttgttgctgtaaagctcc 448874
Score = 107 bits (54), Expect = 3e-020
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 1299 caggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaattg 1358
|||| ||||| ||||| || |||||||||||||| || |||||| ||||||| ||||||
Sbjct: 447907 cagggacatcaaagaagtgttcttcaggtttacgccgccgccaccatgcaaatccaattg 447966
Query: 1359 caggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
| ||||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||
Sbjct: 447967 ccggaaccgcaaacagcaatgcagcagctgcagcaacacctccagcaattgctccagt 448024
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1544 cttataggggtgaagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttg 1603
||||||||||| |||||||||||||||||||| || || || | ||||||||| |||||
Sbjct: 448349 cttataggggtaaagagtgaaaaggagccagtagacggaacctctcctgagagattgtta 448408
Query: 1604 ttcgagagatcc 1615
|| |||||||||
Sbjct: 448409 tttgagagatcc 448420
Score = 65.9 bits (33), Expect = 9e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 448178 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 448237
Query: 1514 gggccacaaagat 1526
|||||||||||||
Sbjct: 448238 gggccacaaagat 448250
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027
genomic scaffold, whole genome shotgun sequence
Length = 13167135
Score = 307 bits (155), Expect = 1e-080
Identities = 290/335 (86%)
Strand = Plus / Plus
Query: 578 acatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaataagctcc 637
||||| ||||| |||||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 722150 acatcatcatcgtttgcaagacgagcaagatcaaatgccctttgtcctgtaatgagctca 722209
Query: 638 agaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggtagatagg 697
||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 722210 agaagcatgattccatagccaaaaacatcagtcttctcagaggacttcccagtagagagg 722269
Query: 698 tactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggtatccttg 757
||||| ||||||||||| || || || |||||||||||||| || ||||| || ||||||
Sbjct: 722270 tactcaggagcaatgtgtccgatcgtcccacgaacagctgtggttacatgagtgtccttg 722329
Query: 758 tagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctcatccaaa 817
|| |||||||| ||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 722330 taatccataagtttggccagtccaaagtcacccacgactgcctcaaaatcttcatccaac 722389
Query: 818 agaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaag 877
||||||||||||||||||||||| ||||| ||||| |||||||| || || || ||||||
Sbjct: 722390 agaatatttgcagctttgacatcacgatgaatgatcttgggatcacaatggtcgtgcaag 722449
Query: 878 taagaaagtcctcttgcagatcccagtgcaatccg 912
|| || | |||||| ||||||||||| ||||||||
Sbjct: 722450 taggacaatcctctggcagatcccagcgcaatccg 722484
Score = 238 bits (120), Expect = 1e-059
Identities = 243/284 (85%)
Strand = Plus / Plus
Query: 965 cgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtc 1024
|||||||| |||||||| ||||||||||| || ||||| | |||| ||| ||||| |||
Sbjct: 722866 cgtgatgcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtc 722925
Query: 1025 atgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacc 1084
||||| || ||||| || || || |||||| | |||||||||||||||||||| |||||
Sbjct: 722926 atgcaaaatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaact 722985
Query: 1085 tctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgct 1144
|||||||||||||| |||||||||||||| ||||| || ||||||| |||||||||||||
Sbjct: 722986 tctgtttggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgct 723045
Query: 1145 accaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaa 1204
||||| |||||||| || || || ||||||||||| |||||||| || |||||||| | |
Sbjct: 723046 accaacgagccatctgccagtctacctttgtacacctttccaaagccacctcttcccaga 723105
Query: 1205 atgttcttgttactgaaattatcagttgcaacttgaagctcccg 1248
|| ||||| || || || |||||||| |||||||||||||||||
Sbjct: 723106 atattcttattgctaaagttatcagtagcaacttgaagctcccg 723149
Score = 167 bits (84), Expect = 3e-038
Identities = 255/312 (81%)
Strand = Plus / Plus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 721464 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 721523
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 721524 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 721583
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 721584 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 721643
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 721644 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 721703
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 721704 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 721763
Query: 551 agtcctttcacc 562
|| |||||||||
Sbjct: 721764 agccctttcacc 721775
Score = 109 bits (55), Expect = 6e-021
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 1927 gttacacgtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaa 1986
|||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 724645 gttacaagttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcag 724704
Query: 1987 gacattgttagcatctttcaagctctgacgcaggctgtacagggcatcacc 2037
||||||||||||||||||| || || ||||| || || |||||||||||
Sbjct: 724705 cacattgttagcatctttcagactttggcgcagactatatagggcatcacc 724755
Score = 109 bits (55), Expect = 6e-021
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 724149 ccagtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttca 724208
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||||||||||||||||||||||||||||||||||
Sbjct: 724209 ttaggtattgtcccacttatgttgttgctgtaaagctcc 724247
Score = 107 bits (54), Expect = 3e-020
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 1299 caggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaattg 1358
|||| ||||| ||||| || |||||||||||||| || |||||| ||||||| ||||||
Sbjct: 723280 cagggacatcaaagaagtgttcttcaggtttacgccgccgccaccatgcaaatccaattg 723339
Query: 1359 caggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
| ||||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||
Sbjct: 723340 ccggaaccgcaaacagcaatgcagcagctgcagcaacacctccagcaattgctccagt 723397
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1544 cttataggggtgaagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttg 1603
||||||||||| |||||||||||||||||||| || || || | ||||||||| |||||
Sbjct: 723722 cttataggggtaaagagtgaaaaggagccagtagacggaacctctcctgagagattgtta 723781
Query: 1604 ttcgagagatcc 1615
|| |||||||||
Sbjct: 723782 tttgagagatcc 723793
Score = 65.9 bits (33), Expect = 9e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 723551 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 723610
Query: 1514 gggccacaaagat 1526
|||||||||||||
Sbjct: 723611 gggccacaaagat 723623
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 307 bits (155), Expect = 1e-080
Identities = 290/335 (86%)
Strand = Plus / Plus
Query: 578 acatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaataagctcc 637
||||| ||||| |||||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 19866249 acatcatcatcgtttgcaagacgagcaagatcaaatgccctttgtcctgtaatgagctca 19866308
Query: 638 agaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggtagatagg 697
||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 19866309 agaagcatgattccatagccaaaaacatcagtcttctcagaggacttcccagtagagagg 19866368
Query: 698 tactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggtatccttg 757
||||| ||||||||||| || || || |||||||||||||| || ||||| || ||||||
Sbjct: 19866369 tactcaggagcaatgtgtccgatcgtcccacgaacagctgtggttacatgagtgtccttg 19866428
Query: 758 tagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctcatccaaa 817
|| |||||||| ||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 19866429 taatccataagtttggccagtccaaagtcacccacgactgcctcaaaatcttcatccaac 19866488
Query: 818 agaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaag 877
||||||||||||||||||||||| ||||| ||||| |||||||| || || || ||||||
Sbjct: 19866489 agaatatttgcagctttgacatcacgatgaatgatcttgggatcacaatggtcgtgcaag 19866548
Query: 878 taagaaagtcctcttgcagatcccagtgcaatccg 912
|| || | |||||| ||||||||||| ||||||||
Sbjct: 19866549 taggacaatcctctggcagatcccagcgcaatccg 19866583
Score = 238 bits (120), Expect = 1e-059
Identities = 243/284 (85%)
Strand = Plus / Plus
Query: 965 cgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtc 1024
|||||||| |||||||| ||||||||||| || ||||| | |||| ||| ||||| |||
Sbjct: 19866965 cgtgatgcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtc 19867024
Query: 1025 atgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacc 1084
||||| || ||||| || || || |||||| | |||||||||||||||||||| |||||
Sbjct: 19867025 atgcaaaatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaact 19867084
Query: 1085 tctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgct 1144
|||||||||||||| |||||||||||||| ||||| || ||||||| |||||||||||||
Sbjct: 19867085 tctgtttggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgct 19867144
Query: 1145 accaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaa 1204
||||| |||||||| || || || ||||||||||| |||||||| || |||||||| | |
Sbjct: 19867145 accaacgagccatctgccagtctacctttgtacacctttccaaagccacctcttcccaga 19867204
Query: 1205 atgttcttgttactgaaattatcagttgcaacttgaagctcccg 1248
|| ||||| || || || |||||||| |||||||||||||||||
Sbjct: 19867205 atattcttattgctaaagttatcagtagcaacttgaagctcccg 19867248
Score = 167 bits (84), Expect = 3e-038
Identities = 255/312 (81%)
Strand = Plus / Plus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 19865563 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 19865622
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 19865623 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 19865682
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 19865683 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 19865742
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 19865743 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 19865802
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 19865803 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 19865862
Query: 551 agtcctttcacc 562
|| |||||||||
Sbjct: 19865863 agccctttcacc 19865874
Score = 109 bits (55), Expect = 6e-021
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 1927 gttacacgtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaa 1986
|||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 19868744 gttacaagttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcag 19868803
Query: 1987 gacattgttagcatctttcaagctctgacgcaggctgtacagggcatcacc 2037
||||||||||||||||||| || || ||||| || || |||||||||||
Sbjct: 19868804 cacattgttagcatctttcagactttggcgcagactatatagggcatcacc 19868854
Score = 109 bits (55), Expect = 6e-021
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 19868248 ccagtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttca 19868307
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||||||||||||||||||||||||||||||||||
Sbjct: 19868308 ttaggtattgtcccacttatgttgttgctgtaaagctcc 19868346
Score = 107 bits (54), Expect = 3e-020
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 1299 caggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaattg 1358
|||| ||||| ||||| || |||||||||||||| || |||||| ||||||| ||||||
Sbjct: 19867379 cagggacatcaaagaagtgttcttcaggtttacgccgccgccaccatgcaaatccaattg 19867438
Query: 1359 caggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
| ||||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||
Sbjct: 19867439 ccggaaccgcaaacagcaatgcagcagctgcagcaacacctccagcaattgctccagt 19867496
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1544 cttataggggtgaagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttg 1603
||||||||||| |||||||||||||||||||| || || || | ||||||||| |||||
Sbjct: 19867821 cttataggggtaaagagtgaaaaggagccagtagacggaacctctcctgagagattgtta 19867880
Query: 1604 ttcgagagatcc 1615
|| |||||||||
Sbjct: 19867881 tttgagagatcc 19867892
Score = 65.9 bits (33), Expect = 9e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 19867650 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 19867709
Query: 1514 gggccacaaagat 1526
|||||||||||||
Sbjct: 19867710 gggccacaaagat 19867722
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
complete sequence
Length = 138969
Score = 307 bits (155), Expect = 1e-080
Identities = 290/335 (86%)
Strand = Plus / Plus
Query: 578 acatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaataagctcc 637
||||| ||||| |||||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 51799 acatcatcatcgtttgcaagacgagcaagatcaaatgccctttgtcctgtaatgagctca 51858
Query: 638 agaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggtagatagg 697
||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 51859 agaagcatgattccatagccaaaaacatcagtcttctcagaggacttcccagtagagagg 51918
Query: 698 tactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggtatccttg 757
||||| ||||||||||| || || || |||||||||||||| || ||||| || ||||||
Sbjct: 51919 tactcaggagcaatgtgtccgatcgtcccacgaacagctgtggttacatgagtgtccttg 51978
Query: 758 tagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctcatccaaa 817
|| |||||||| ||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 51979 taatccataagtttggccagtccaaagtcacccacgactgcctcaaaatcttcatccaac 52038
Query: 818 agaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaag 877
||||||||||||||||||||||| ||||| ||||| |||||||| || || || ||||||
Sbjct: 52039 agaatatttgcagctttgacatcacgatgaatgatcttgggatcacaatggtcgtgcaag 52098
Query: 878 taagaaagtcctcttgcagatcccagtgcaatccg 912
|| || | |||||| ||||||||||| ||||||||
Sbjct: 52099 taggacaatcctctggcagatcccagcgcaatccg 52133
Score = 238 bits (120), Expect = 1e-059
Identities = 243/284 (85%)
Strand = Plus / Plus
Query: 965 cgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtc 1024
|||||||| |||||||| ||||||||||| || ||||| | |||| ||| ||||| |||
Sbjct: 52515 cgtgatgcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtc 52574
Query: 1025 atgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacc 1084
||||| || ||||| || || || |||||| | |||||||||||||||||||| |||||
Sbjct: 52575 atgcaaaatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaact 52634
Query: 1085 tctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgct 1144
|||||||||||||| |||||||||||||| ||||| || ||||||| |||||||||||||
Sbjct: 52635 tctgtttggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgct 52694
Query: 1145 accaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaa 1204
||||| |||||||| || || || ||||||||||| |||||||| || |||||||| | |
Sbjct: 52695 accaacgagccatctgccagtctacctttgtacacctttccaaagccacctcttcccaga 52754
Query: 1205 atgttcttgttactgaaattatcagttgcaacttgaagctcccg 1248
|| ||||| || || || |||||||| |||||||||||||||||
Sbjct: 52755 atattcttattgctaaagttatcagtagcaacttgaagctcccg 52798
Score = 167 bits (84), Expect = 3e-038
Identities = 255/312 (81%)
Strand = Plus / Plus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 51113 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 51172
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 51173 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 51232
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 51233 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 51292
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 51293 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 51352
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 51353 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 51412
Query: 551 agtcctttcacc 562
|| |||||||||
Sbjct: 51413 agccctttcacc 51424
Score = 109 bits (55), Expect = 6e-021
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 1927 gttacacgtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaa 1986
|||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 54294 gttacaagttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcag 54353
Query: 1987 gacattgttagcatctttcaagctctgacgcaggctgtacagggcatcacc 2037
||||||||||||||||||| || || ||||| || || |||||||||||
Sbjct: 54354 cacattgttagcatctttcagactttggcgcagactatatagggcatcacc 54404
Score = 109 bits (55), Expect = 6e-021
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 53798 ccagtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttca 53857
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||||||||||||||||||||||||||||||||||
Sbjct: 53858 ttaggtattgtcccacttatgttgttgctgtaaagctcc 53896
Score = 107 bits (54), Expect = 3e-020
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 1299 caggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaattg 1358
|||| ||||| ||||| || |||||||||||||| || |||||| ||||||| ||||||
Sbjct: 52929 cagggacatcaaagaagtgttcttcaggtttacgccgccgccaccatgcaaatccaattg 52988
Query: 1359 caggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
| ||||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||
Sbjct: 52989 ccggaaccgcaaacagcaatgcagcagctgcagcaacacctccagcaattgctccagt 53046
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1544 cttataggggtgaagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttg 1603
||||||||||| |||||||||||||||||||| || || || | ||||||||| |||||
Sbjct: 53371 cttataggggtaaagagtgaaaaggagccagtagacggaacctctcctgagagattgtta 53430
Query: 1604 ttcgagagatcc 1615
|| |||||||||
Sbjct: 53431 tttgagagatcc 53442
Score = 65.9 bits (33), Expect = 9e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 53200 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 53259
Query: 1514 gggccacaaagat 1526
|||||||||||||
Sbjct: 53260 gggccacaaagat 53272
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 307 bits (155), Expect = 1e-080
Identities = 290/335 (86%)
Strand = Plus / Plus
Query: 578 acatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaataagctcc 637
||||| ||||| |||||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 22843024 acatcatcatcgtttgcaagacgagcaagatcaaatgccctttgtcctgtaatgagctca 22843083
Query: 638 agaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggtagatagg 697
||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 22843084 agaagcatgattccatagccaaaaacatcagtcttctcagaggacttcccagtagagagg 22843143
Query: 698 tactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggtatccttg 757
||||| ||||||||||| || || || |||||||||||||| || ||||| || ||||||
Sbjct: 22843144 tactcaggagcaatgtgtccgatcgtcccacgaacagctgtggttacatgagtgtccttg 22843203
Query: 758 tagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctcatccaaa 817
|| |||||||| ||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 22843204 taatccataagtttggccagtccaaagtcacccacgactgcctcaaaatcttcatccaac 22843263
Query: 818 agaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaag 877
||||||||||||||||||||||| ||||| ||||| |||||||| || || || ||||||
Sbjct: 22843264 agaatatttgcagctttgacatcacgatgaatgatcttgggatcacaatggtcgtgcaag 22843323
Query: 878 taagaaagtcctcttgcagatcccagtgcaatccg 912
|| || | |||||| ||||||||||| ||||||||
Sbjct: 22843324 taggacaatcctctggcagatcccagcgcaatccg 22843358
Score = 238 bits (120), Expect = 1e-059
Identities = 243/284 (85%)
Strand = Plus / Plus
Query: 965 cgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtc 1024
|||||||| |||||||| ||||||||||| || ||||| | |||| ||| ||||| |||
Sbjct: 22843740 cgtgatgcgacactcccattagccatgtagggatagacaagtaaccgttctgtaggcgtc 22843799
Query: 1025 atgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacc 1084
||||| || ||||| || || || |||||| | |||||||||||||||||||| |||||
Sbjct: 22843800 atgcaaaatccacggagccgaagcaggttcctatgcaccgccatgctaatcatttcaact 22843859
Query: 1085 tctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgct 1144
|||||||||||||| |||||||||||||| ||||| || ||||||| |||||||||||||
Sbjct: 22843860 tctgtttggaactggagctcaccaccaggggtacgttcttcttttaatcttttcactgct 22843919
Query: 1145 accaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaa 1204
||||| |||||||| || || || ||||||||||| |||||||| || |||||||| | |
Sbjct: 22843920 accaacgagccatctgccagtctacctttgtacacctttccaaagccacctcttcccaga 22843979
Query: 1205 atgttcttgttactgaaattatcagttgcaacttgaagctcccg 1248
|| ||||| || || || |||||||| |||||||||||||||||
Sbjct: 22843980 atattcttattgctaaagttatcagtagcaacttgaagctcccg 22844023
Score = 167 bits (84), Expect = 3e-038
Identities = 255/312 (81%)
Strand = Plus / Plus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 22842338 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 22842397
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 22842398 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 22842457
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 22842458 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 22842517
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 22842518 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 22842577
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 22842578 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 22842637
Query: 551 agtcctttcacc 562
|| |||||||||
Sbjct: 22842638 agccctttcacc 22842649
Score = 109 bits (55), Expect = 6e-021
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 1927 gttacacgtaacatggaaccatgtacatggattaacaagagtgggatcccaactctgcaa 1986
|||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 22845519 gttacaagttacatggaaccatgtgcatggattgaccagagtgggatcccaactctgcag 22845578
Query: 1987 gacattgttagcatctttcaagctctgacgcaggctgtacagggcatcacc 2037
||||||||||||||||||| || || ||||| || || |||||||||||
Sbjct: 22845579 cacattgttagcatctttcagactttggcgcagactatatagggcatcacc 22845629
Score = 109 bits (55), Expect = 6e-021
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 22845023 ccagtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttca 22845082
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||||||||||||||||||||||||||||||||||
Sbjct: 22845083 ttaggtattgtcccacttatgttgttgctgtaaagctcc 22845121
Score = 107 bits (54), Expect = 3e-020
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 1299 caggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaattg 1358
|||| ||||| ||||| || |||||||||||||| || |||||| ||||||| ||||||
Sbjct: 22844154 cagggacatcaaagaagtgttcttcaggtttacgccgccgccaccatgcaaatccaattg 22844213
Query: 1359 caggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
| ||||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||
Sbjct: 22844214 ccggaaccgcaaacagcaatgcagcagctgcagcaacacctccagcaattgctccagt 22844271
Score = 71.9 bits (36), Expect = 1e-009
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1544 cttataggggtgaagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttg 1603
||||||||||| |||||||||||||||||||| || || || | ||||||||| |||||
Sbjct: 22844596 cttataggggtaaagagtgaaaaggagccagtagacggaacctctcctgagagattgtta 22844655
Query: 1604 ttcgagagatcc 1615
|| |||||||||
Sbjct: 22844656 tttgagagatcc 22844667
Score = 65.9 bits (33), Expect = 9e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 22844425 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 22844484
Query: 1514 gggccacaaagat 1526
|||||||||||||
Sbjct: 22844485 gggccacaaagat 22844497
Score = 44.1 bits (22), Expect = 0.31
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 2084 gcaaggaccaccgcccaccacc 2105
||||||||||||||||||||||
Sbjct: 29634550 gcaaggaccaccgcccaccacc 29634529
>gb|CB671776.1|CB671776 OSJNEe05I05.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05I05 5', mRNA sequence
Length = 761
Score = 303 bits (153), Expect = 2e-079
Identities = 414/501 (82%)
Strand = Plus / Minus
Query: 1556 aagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttgttcgagagatcc 1615
|||||||||||||||||||| || || || | ||||||||| ||||| || |||||||||
Sbjct: 761 aagagtgaaaaggagccagtagacggaacctctcctgagagattgttatttgagagatcc 702
Query: 1616 agtacttggagagtggagatattggtcaaggatacgggaatcgggccaaccaagctattg 1675
|| ||||| ||||| | |||||||||||||||| ||||| | ||| | || |||
Sbjct: 701 agaacttgaagagtagtgatattggtcaaggattttggaattgaaccagaaagactgttg 642
Query: 1676 ttgttaagacgtaggaaacgcagcttcactagattccccaggctgtcagggatattgcca 1735
||||||||||| |||||||||||||| || | ||||| | | || || ||| |||
Sbjct: 641 ttgttaagacgaaggaaacgcagcttgtagagttgccccaaggtctccggaataaaacca 582
Query: 1736 gagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttcaggg 1795
| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 581 gtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttcatta 522
Query: 1796 ggtattgtcccacttatgttgttgctgtaaagctccaaatattggagatttttcagctgg 1855
||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct: 521 ggtattgtcccacttatgttgttgctgtaaagctccagatattgcagatttttcaactgc 462
Query: 1856 ccaagttgtggcactagaacgccagataattgtgcatttccaaggtcaactctgataaca 1915
||||| || || || | | || || | ||||||||||||||| ||||||||||| ||
Sbjct: 461 ccaagctggggaaccaatgcacctgacagttgtgcatttccaagatcaactctgatcacg 402
Query: 1916 ctgttatcgttgttacacgtaacatggaaccatgtacatggattaacaagagtgggatcc 1975
||||| || |||||| || |||||||||||||| |||||||| || ||||||||||||
Sbjct: 401 ctgttgtcagggttacaagttacatggaaccatgtgcatggattgaccagagtgggatcc 342
Query: 1976 caactctgcaagacattgttagcatctttcaagctctgacgcaggctgtacagggcatca 2035
|||||||||| ||||||||||||||||||| ||||| ||||| || || |||||||||
Sbjct: 341 caactctgcagcacattgttagcatctttcagactctggcgcagactatatagggcatca 282
Query: 2036 ccctcggtgttggcgacgacc 2056
||||| ||||||||| |||||
Sbjct: 281 ccctccgtgttggcgccgacc 261
>dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E16, full
insert sequence
Length = 2674
Score = 293 bits (148), Expect = 2e-076
Identities = 721/912 (79%)
Strand = Plus / Minus
Query: 511 atctgggtccaccagcatctccaccttcttctccttcaacagtcctttcacccagtcaag 570
|||||| || |||| |||||||| | | |||||||| | | |||||| |||||||| ||
Sbjct: 1896 atctggatcaaccaacatctccagccttttctccttgagtaatccttttacccagtccag 1837
Query: 571 aagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaat 630
||||| ||||| |||||||| || |||||||| || ||||| || | || || || ||
Sbjct: 1836 tagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgttgtcctgttat 1777
Query: 631 aagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggt 690
|||||||| |||||| |||||||| ||||| |||||||| |||||||| || || || ||
Sbjct: 1776 aagctccaaaagcataatcccataaccaaatacatcagttttctcagatgattttcctgt 1717
Query: 691 agataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggt 750
|| || || || || ||||| |||||||||||||||||||| || ||||| ||||||||
Sbjct: 1716 tgaaagatattctggtgcaatatgcccaattgttccacgaactgcagttgttacatgggt 1657
Query: 751 atccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctc 810
||||||||| ||||| || ||||| | || || || || || || || || ||||| ||
Sbjct: 1656 atccttgtaatccattagtttggccaaaccaaagtcccctactacagcttcaaagtcttc 1597
Query: 811 atccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatc 870
||| || | ||||||||||||||||||||| |||||||| || || || || || |||||
Sbjct: 1596 atctaataaaatatttgcagctttgacatcacgatggataatctttgggtcacaatgatc 1537
Query: 871 atgcaagtaagaaagtcctcttgcagatcccagtgcaatccgtcttcttggttcccagct 930
||| || || || || || || || || |||| ||||||| |||||||| | |||
Sbjct: 1536 atgtaaataggacagccccctggcggaacccaacgcaatccttcttcttgttcgccaatc 1477
Query: 931 aagaggtggctcagatggctgccgctctcgtaaacgtgatgccacactcccgttagccat 990
||| || || || ||||| |||| |||| | |||||| || || || || ||||||||
Sbjct: 1476 aagtggaggttccgatggtggccgttctctaagacgtgacgcaacgcttccattagccat 1417
Query: 991 gtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagtcggagaag 1050
|||||| || || | ||||||||| || |||||||| ||||| || || | || || ||
Sbjct: 1416 gtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaacgcagcag 1357
Query: 1051 gttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagctcaccacc 1110
|| | || || |||||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 1356 atttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagttccccacc 1297
Query: 1111 aggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagcaagccttcc 1170
|||||| | |||||| |||||||| || || ||||| || || ||||| || | |||||
Sbjct: 1296 aggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgctaatcttcc 1237
Query: 1171 tttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaattatcagt 1230
||| || || || ||||| || |||||||| | |||||| || || ||||| |||| ||
Sbjct: 1236 tttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaaggtatctgt 1177
Query: 1231 tgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggacttctggatc 1290
||||||||| || || || | |||||| |||| ||||| ||||||||||| ||||||||
Sbjct: 1176 tgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacctctggatc 1117
Query: 1291 ctcctcggcaggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaa 1350
|||||| ||||| ||||| ||||||||||||| ||||| | || || || ||||||
Sbjct: 1116 ctcctcagcaggcacatcaaagaaatgctcttggggtttcctgcgccgataccatgcaaa 1057
Query: 1351 tgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgc 1410
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||
Sbjct: 1056 accaatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgc 997
Query: 1411 tccagtgctaga 1422
|||||| |||||
Sbjct: 996 tccagtactaga 985
Score = 95.6 bits (48), Expect = 1e-016
Identities = 198/248 (79%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 674 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 615
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctccaaatattggagatttttcagc 1852
||||| || || |||||||| || ||||| ||||||| ||||| | ||||| ||
Sbjct: 614 ctaggtatcgttccgcttatgttattactgtagagctccaggtattgcaagttttttagt 555
Query: 1853 tggccaagttgtggcactagaacgccagataattgtgcatttccaaggtcaactctgata 1912
|| ||||||||||| || | | ||| |||| | ||||| ||||| ||||||||||||
Sbjct: 554 tgcccaagttgtgggaccaaagtgcctgatagtgcagcattcccaagatcaactctgata 495
Query: 1913 acactgttatcgttgttacacgtaacatggaaccatgtacatggattaacaagagtggga 1972
|||||||| ||||| || || |||||||| ||||| || || ||||| || ||||| ||
Sbjct: 494 acactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgaccagagttggg 435
Query: 1973 tcccaact 1980
||||||||
Sbjct: 434 tcccaact 427
Score = 85.7 bits (43), Expect = 9e-014
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttc 1504
|||| ||||||||| |||||||||||||||||||||| ||||| |||||||| || ||
Sbjct: 962 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggcaaggtttt 903
Query: 1505 gaagtaccagggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaa 1564
| || ||||| ||||| | || |||||||||||||| ||||||||||| | ||||
Sbjct: 902 gtggtcccaggaccacacaaggaagggttgttggcaaaactgataggggtgaataatgaa 843
Query: 1565 aaggagccagtcgatgggacttgtcctgagaggttgttgttcgagagatccagtacttg 1623
||||| ||||| ||||| |||| ||| || | |||||||| || ||||| || |||||
Sbjct: 842 aaggaaccagttgatggaacttctccagacaaattgttgtttgaaagatctagaacttg 784
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 2051 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 1992
Query: 416 gacatctt 423
| ||||||
Sbjct: 1991 gccatctt 1984
>ref|XM_480325.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2674
Score = 293 bits (148), Expect = 2e-076
Identities = 721/912 (79%)
Strand = Plus / Minus
Query: 511 atctgggtccaccagcatctccaccttcttctccttcaacagtcctttcacccagtcaag 570
|||||| || |||| |||||||| | | |||||||| | | |||||| |||||||| ||
Sbjct: 1896 atctggatcaaccaacatctccagccttttctccttgagtaatccttttacccagtccag 1837
Query: 571 aagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaat 630
||||| ||||| |||||||| || |||||||| || ||||| || | || || || ||
Sbjct: 1836 tagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgttgtcctgttat 1777
Query: 631 aagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggt 690
|||||||| |||||| |||||||| ||||| |||||||| |||||||| || || || ||
Sbjct: 1776 aagctccaaaagcataatcccataaccaaatacatcagttttctcagatgattttcctgt 1717
Query: 691 agataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggt 750
|| || || || || ||||| |||||||||||||||||||| || ||||| ||||||||
Sbjct: 1716 tgaaagatattctggtgcaatatgcccaattgttccacgaactgcagttgttacatgggt 1657
Query: 751 atccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctc 810
||||||||| ||||| || ||||| | || || || || || || || || ||||| ||
Sbjct: 1656 atccttgtaatccattagtttggccaaaccaaagtcccctactacagcttcaaagtcttc 1597
Query: 811 atccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatc 870
||| || | ||||||||||||||||||||| |||||||| || || || || || |||||
Sbjct: 1596 atctaataaaatatttgcagctttgacatcacgatggataatctttgggtcacaatgatc 1537
Query: 871 atgcaagtaagaaagtcctcttgcagatcccagtgcaatccgtcttcttggttcccagct 930
||| || || || || || || || || |||| ||||||| |||||||| | |||
Sbjct: 1536 atgtaaataggacagccccctggcggaacccaacgcaatccttcttcttgttcgccaatc 1477
Query: 931 aagaggtggctcagatggctgccgctctcgtaaacgtgatgccacactcccgttagccat 990
||| || || || ||||| |||| |||| | |||||| || || || || ||||||||
Sbjct: 1476 aagtggaggttccgatggtggccgttctctaagacgtgacgcaacgcttccattagccat 1417
Query: 991 gtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagtcggagaag 1050
|||||| || || | ||||||||| || |||||||| ||||| || || | || || ||
Sbjct: 1416 gtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaacgcagcag 1357
Query: 1051 gttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagctcaccacc 1110
|| | || || |||||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 1356 atttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagttccccacc 1297
Query: 1111 aggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagcaagccttcc 1170
|||||| | |||||| |||||||| || || ||||| || || ||||| || | |||||
Sbjct: 1296 aggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgctaatcttcc 1237
Query: 1171 tttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaattatcagt 1230
||| || || || ||||| || |||||||| | |||||| || || ||||| |||| ||
Sbjct: 1236 tttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaaggtatctgt 1177
Query: 1231 tgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggacttctggatc 1290
||||||||| || || || | |||||| |||| ||||| ||||||||||| ||||||||
Sbjct: 1176 tgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacctctggatc 1117
Query: 1291 ctcctcggcaggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaa 1350
|||||| ||||| ||||| ||||||||||||| ||||| | || || || ||||||
Sbjct: 1116 ctcctcagcaggcacatcaaagaaatgctcttggggtttcctgcgccgataccatgcaaa 1057
Query: 1351 tgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgc 1410
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||
Sbjct: 1056 accaatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgc 997
Query: 1411 tccagtgctaga 1422
|||||| |||||
Sbjct: 996 tccagtactaga 985
Score = 95.6 bits (48), Expect = 1e-016
Identities = 198/248 (79%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 674 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 615
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctccaaatattggagatttttcagc 1852
||||| || || |||||||| || ||||| ||||||| ||||| | ||||| ||
Sbjct: 614 ctaggtatcgttccgcttatgttattactgtagagctccaggtattgcaagttttttagt 555
Query: 1853 tggccaagttgtggcactagaacgccagataattgtgcatttccaaggtcaactctgata 1912
|| ||||||||||| || | | ||| |||| | ||||| ||||| ||||||||||||
Sbjct: 554 tgcccaagttgtgggaccaaagtgcctgatagtgcagcattcccaagatcaactctgata 495
Query: 1913 acactgttatcgttgttacacgtaacatggaaccatgtacatggattaacaagagtggga 1972
|||||||| ||||| || || |||||||| ||||| || || ||||| || ||||| ||
Sbjct: 494 acactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgaccagagttggg 435
Query: 1973 tcccaact 1980
||||||||
Sbjct: 434 tcccaact 427
Score = 85.7 bits (43), Expect = 9e-014
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttc 1504
|||| ||||||||| |||||||||||||||||||||| ||||| |||||||| || ||
Sbjct: 962 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggcaaggtttt 903
Query: 1505 gaagtaccagggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaa 1564
| || ||||| ||||| | || |||||||||||||| ||||||||||| | ||||
Sbjct: 902 gtggtcccaggaccacacaaggaagggttgttggcaaaactgataggggtgaataatgaa 843
Query: 1565 aaggagccagtcgatgggacttgtcctgagaggttgttgttcgagagatccagtacttg 1623
||||| ||||| ||||| |||| ||| || | |||||||| || ||||| || |||||
Sbjct: 842 aaggaaccagttgatggaacttctccagacaaattgttgtttgaaagatctagaacttg 784
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 2051 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 1992
Query: 416 gacatctt 423
| ||||||
Sbjct: 1991 gccatctt 1984
>dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSERK1 mRNA for SERK-family
receptor-like protein kinase, complete cds
Length = 2674
Score = 293 bits (148), Expect = 2e-076
Identities = 721/912 (79%)
Strand = Plus / Minus
Query: 511 atctgggtccaccagcatctccaccttcttctccttcaacagtcctttcacccagtcaag 570
|||||| || |||| |||||||| | | |||||||| | | |||||| |||||||| ||
Sbjct: 1841 atctggatcaaccaacatctccagccttttctccttgagtaatccttttacccagtccag 1782
Query: 571 aagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagtaat 630
||||| ||||| |||||||| || |||||||| || ||||| || | || || || ||
Sbjct: 1781 tagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgttgtcctgttat 1722
Query: 631 aagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccggt 690
|||||||| |||||| |||||||| ||||| |||||||| |||||||| || || || ||
Sbjct: 1721 aagctccaaaagcataatcccataaccaaatacatcagttttctcagatgattttcctgt 1662
Query: 691 agataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgggt 750
|| || || || || ||||| |||||||||||||||||||| || ||||| ||||||||
Sbjct: 1661 tgaaagatattctggtgcaatatgcccaattgttccacgaactgcagttgttacatgggt 1602
Query: 751 atccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcctc 810
||||||||| ||||| || ||||| | || || || || || || || || ||||| ||
Sbjct: 1601 atccttgtaatccattagtttggccaaaccaaagtcccctactacagcttcaaagtcttc 1542
Query: 811 atccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatc 870
||| || | ||||||||||||||||||||| |||||||| || || || || || |||||
Sbjct: 1541 atctaataaaatatttgcagctttgacatcacgatggataatctttgggtcacaatgatc 1482
Query: 871 atgcaagtaagaaagtcctcttgcagatcccagtgcaatccgtcttcttggttcccagct 930
||| || || || || || || || || |||| ||||||| |||||||| | |||
Sbjct: 1481 atgtaaataggacagccccctggcggaacccaacgcaatccttcttcttgttcgccaatc 1422
Query: 931 aagaggtggctcagatggctgccgctctcgtaaacgtgatgccacactcccgttagccat 990
||| || || || ||||| |||| |||| | |||||| || || || || ||||||||
Sbjct: 1421 aagtggaggttccgatggtggccgttctctaagacgtgacgcaacgcttccattagccat 1362
Query: 991 gtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagtcggagaag 1050
|||||| || || | ||||||||| || |||||||| ||||| || || | || || ||
Sbjct: 1361 gtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaacgcagcag 1302
Query: 1051 gttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagctcaccacc 1110
|| | || || |||||||||||||||||||| |||||||| ||||| || || |||||
Sbjct: 1301 atttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagttccccacc 1242
Query: 1111 aggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagcaagccttcc 1170
|||||| | |||||| |||||||| || || ||||| || || ||||| || | |||||
Sbjct: 1241 aggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgctaatcttcc 1182
Query: 1171 tttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaattatcagt 1230
||| || || || ||||| || |||||||| | |||||| || || ||||| |||| ||
Sbjct: 1181 tttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaaggtatctgt 1122
Query: 1231 tgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggacttctggatc 1290
||||||||| || || || | |||||| |||| ||||| ||||||||||| ||||||||
Sbjct: 1121 tgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacctctggatc 1062
Query: 1291 ctcctcggcaggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaa 1350
|||||| ||||| ||||| ||||||||||||| ||||| | || || || ||||||
Sbjct: 1061 ctcctcagcaggcacatcaaagaaatgctcttggggtttcctgcgccgataccatgcaaa 1002
Query: 1351 tgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgc 1410
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||
Sbjct: 1001 accaatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgc 942
Query: 1411 tccagtgctaga 1422
|||||| |||||
Sbjct: 941 tccagtactaga 930
Score = 95.6 bits (48), Expect = 1e-016
Identities = 198/248 (79%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 619 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 560
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctccaaatattggagatttttcagc 1852
||||| || || |||||||| || ||||| ||||||| ||||| | ||||| ||
Sbjct: 559 ctaggtatcgttccgcttatgttattactgtagagctccaggtattgcaagttttttagt 500
Query: 1853 tggccaagttgtggcactagaacgccagataattgtgcatttccaaggtcaactctgata 1912
|| ||||||||||| || | | ||| |||| | ||||| ||||| ||||||||||||
Sbjct: 499 tgcccaagttgtgggaccaaagtgcctgatagtgcagcattcccaagatcaactctgata 440
Query: 1913 acactgttatcgttgttacacgtaacatggaaccatgtacatggattaacaagagtggga 1972
|||||||| ||||| || || |||||||| ||||| || || ||||| || ||||| ||
Sbjct: 439 acactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgaccagagttggg 380
Query: 1973 tcccaact 1980
||||||||
Sbjct: 379 tcccaact 372
Score = 85.7 bits (43), Expect = 9e-014
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttc 1504
|||| ||||||||| |||||||||||||||||||||| ||||| |||||||| || ||
Sbjct: 907 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggcaaggtttt 848
Query: 1505 gaagtaccagggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaa 1564
| || ||||| ||||| | || |||||||||||||| ||||||||||| | ||||
Sbjct: 847 gtggtcccaggaccacacaaggaagggttgttggcaaaactgataggggtgaataatgaa 788
Query: 1565 aaggagccagtcgatgggacttgtcctgagaggttgttgttcgagagatccagtacttg 1623
||||| ||||| ||||| |||| ||| || | |||||||| || ||||| || |||||
Sbjct: 787 aaggaaccagttgatggaacttctccagacaaattgttgtttgaaagatctagaacttg 729
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 1996 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 1937
Query: 416 gacatctt 423
| ||||||
Sbjct: 1936 gccatctt 1929
>gb|CB671777.1|CB671777 OSJNEe05I05.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05I05 3', mRNA sequence
Length = 741
Score = 280 bits (141), Expect = 3e-072
Identities = 354/425 (83%)
Strand = Plus / Plus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 317 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 376
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 377 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 436
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 437 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 496
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 497 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 556
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 557 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 616
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|| ||||||||||| || || | ||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 617 agccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatca 676
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|||||||| || || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 677 aatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtc 736
Query: 671 ttctc 675
|||||
Sbjct: 737 ttctc 741
>gb|CB671819.1|CB671819 OSJNEe05J02.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05J02 3', mRNA sequence
Length = 731
Score = 242 bits (122), Expect = 7e-061
Identities = 335/406 (82%)
Strand = Plus / Plus
Query: 251 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 310
||||| |||||||||||||||| || || || ||||| || || ||||||||||||||
Sbjct: 326 tacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtcg 385
Query: 311 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 370
||| || | || ||| ||| |||||||||| |||||||| || |||||||| || |||
Sbjct: 386 ttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctcc 445
Query: 371 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 430
|| ||||| || || || || || || |||||||||||||||||||||||||| || |||
Sbjct: 446 caccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccgg 505
Query: 431 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 490
|||| |||||||||||||||||||| || |||||||| || || ||||||||| |
Sbjct: 506 tccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatgc 565
Query: 491 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 550
||| || || | |||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 566 tccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcagg 625
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|| ||||||||||| || || | ||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 626 agccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatca 685
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagc 656
|||||||| || || ||||| ||||| ||||||||||| |||||||
Sbjct: 686 aatgccctttgtcctgtaatgagctcaagaagcatgattccatagc 731
>gb|CB669447.1|CB669447 OSJNEe01P02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01P02 5', mRNA sequence
Length = 667
Score = 198 bits (100), Expect = 9e-048
Identities = 313/384 (81%)
Strand = Plus / Minus
Query: 1673 ttgttgttaagacgtaggaaacgcagcttcactagattccccaggctgtcagggatattg 1732
|||||||||||||| |||||||||||||| || | ||||| | | || || |||
Sbjct: 638 ttgttgttaagacgaaggaaacgcagcttgtagagttgccccaaggtttccggaataaaa 579
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| || |||||||||||||||| |||||| | ||| |||||||||
Sbjct: 578 ccagtgaagttgttcaggtaaagatccaaactgaccaagttagttaagtttcccagttca 519
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctccaaatattggagatttttcagc 1852
||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct: 518 ttaggtatggtcccacttatgttgttgctgtaaagctccagatattgcagatttttcaac 459
Query: 1853 tggccaagttgtggcactagaacgccagataattgtgcatttccaaggtcaactctgata 1912
|| ||||| || || || | | || || | ||||||||||||||| |||||| |||
Sbjct: 458 tgcccaagctggggaaccaatgcacccgacagttgtgcatttccaagatcaactaagatc 399
Query: 1913 acactgttatcgttgttacacgtaacatggaaccatgtacatggattaacaagagtggga 1972
|| ||||| || |||||| || ||||| | ||| || |||||||| || |||||||||
Sbjct: 398 acgctgttgtcagggttacaagttacatgcacccacgtgcatggattgaccagagtggga 339
Query: 1973 tcccaactctgcaagacattgttagcatctttcaagctctgacgcaggctgtacagggca 2032
|||||||| |||| ||||||||||||||||||| || || ||||| || || ||||||
Sbjct: 338 tcccaactttgcagcacattgttagcatctttcagactgtggcgcagactatatagggca 279
Query: 2033 tcaccctcggtgttggcgacgacc 2056
|||||||| ||||||||| |||||
Sbjct: 278 tcaccctccgtgttggcgccgacc 255
>gb|CB638292.1|CB638292 OSJNEa06G22.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa06G22 5', mRNA sequence
Length = 566
Score = 167 bits (84), Expect = 3e-038
Identities = 207/248 (83%)
Strand = Plus / Minus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 314 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 255
Query: 1514 gggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaaaaggagcca 1573
||||||||||||| | ||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 254 gggccacaaagatctttattattagcaaaacttataggggtaaagagtgaaaaggagcca 195
Query: 1574 gtcgatgggacttgtcctgagaggttgttgttcgagagatccagtacttggagagtggag 1633
|| || || || | ||||||||| ||||| || ||||||||||| ||||| ||||| | |
Sbjct: 194 gtagacggaacctctcctgagagattgttatttgagagatccagaacttgaagagtagtg 135
Query: 1634 atattggtcaaggatacgggaatcgggccaaccaagctattgttgttaagacgtaggaaa 1693
||||||||||||||| ||||| | ||| | || |||||||||||||| ||||||
Sbjct: 134 atattggtcaaggattttggaattgaaccagaaagactgttgttgttaagacgaaggaaa 75
Query: 1694 cgcagctt 1701
||||||||
Sbjct: 74 cgcagctt 67
Score = 119 bits (60), Expect = 7e-024
Identities = 164/196 (83%), Gaps = 2/196 (1%)
Strand = Plus / Minus
Query: 1223 ttatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggact 1282
|||||||| ||||||||||||||||| | ||| || | || || || ||||| || |||
Sbjct: 545 ttatcagtagcaacttgaagctcccggagtgagaatctcttaagttggccaaggtgcact 486
Query: 1283 tctg-gatcctcctcggcaggaacatcgaagaaatgctcttcaggtttacgacggcgcca 1341
|| | |||||||||| ||||| ||||| ||||| || |||||||||||||| || |||||
Sbjct: 485 tccgngatcctcctcagcagggacatcaaagaagtgttcttcaggtttacgccgccgcca 426
Query: 1342 cattgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctcc 1401
| ||||||| ||||||| ||||| ||||||| |||||| ||| | ||||||||||||||
Sbjct: 425 ccatgcaaatccaattgccggaaccgcaaacagcaatgcagcagctgcagcaacacctcc 366
Query: 1402 ag-ctattgctccagt 1416
|| | |||||||||||
Sbjct: 365 agccaattgctccagt 350
>gb|AACV01017395.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017395, whole
genome shotgun sequence
Length = 28596
Score = 155 bits (78), Expect = 1e-034
Identities = 237/290 (81%)
Strand = Plus / Plus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || |
Sbjct: 13544 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 13603
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| || || |||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 13604 tgtcctgttataagctccaaaagcataatcccataaccaaatacatcagttttctcagat 13663
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|| || || || || || || || || ||||| |||||||||||||||||||| || |||
Sbjct: 13664 gattttcctgttgaaagatattctggtgcaatatgcccaattgttccacgaactgcagtt 13723
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| ||||||||||||||||| ||||| || ||||| | || || || || || || ||
Sbjct: 13724 gttacatgggtatccttgtaatccattagtttggccaaaccaaagtcccctactacagct 13783
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggat 849
|| ||||| ||||| || | ||||||||||||||||||||| ||||||||
Sbjct: 13784 tcaaagtcttcatctaataaaatatttgcagctttgacatcacgatggat 13833
Score = 131 bits (66), Expect = 2e-027
Identities = 252/314 (80%)
Strand = Plus / Plus
Query: 983 ttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagt 1042
|||||||||||||| || || | ||||||||| || |||||||| ||||| || || |
Sbjct: 14049 ttagccatgtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaa 14108
Query: 1043 cggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagc 1102
|| || || || | || || |||||||||||||||||||| |||||||| ||||| ||
Sbjct: 14109 cgcagcagatttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagt 14168
Query: 1103 tcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagca 1162
|| ||||||||||| | |||||| |||||||| || || ||||| || || ||||| ||
Sbjct: 14169 tccccaccaggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgct 14228
Query: 1163 agccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaa 1222
| |||||||| || || || ||||| || |||||||| | |||||| || || |||||
Sbjct: 14229 aatcttcctttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaag 14288
Query: 1223 ttatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggact 1282
|||| ||||||||||| || || || | |||||| |||| ||||| |||||||||||
Sbjct: 14289 gtatctgttgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacc 14348
Query: 1283 tctggatcctcctc 1296
||||||||||||||
Sbjct: 14349 tctggatcctcctc 14362
Score = 77.8 bits (39), Expect = 2e-011
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| || || |||||||| || |||||||| || ||||| || |
Sbjct: 2239 acccagtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgt 2298
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
|| || ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 2299 tgtcctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 2357
Score = 65.9 bits (33), Expect = 9e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggca 1497
|||| ||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 14729 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggca 14781
Score = 58.0 bits (29), Expect = 2e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||| ||||| || || |||||||| ||||| || || ||||| ||
Sbjct: 16526 actctgataacactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgacc 16585
Query: 1964 agagtgggatcccaact 1980
||||| || ||||||||
Sbjct: 16586 agagttgggtcccaact 16602
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 2499 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 2558
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 2559 ggacagtcccctggcggaacccaatgcaatcc 2590
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 1765 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 1824
Query: 416 gacatctt 423
| ||||||
Sbjct: 1825 gccatctt 1832
Score = 54.0 bits (27), Expect = 3e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 15946 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 16005
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||| || || |||||||| || ||||| ||||||
Sbjct: 16006 ctaggtatcgttccgcttatgttattactgtagagctcc 16044
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 1353 caattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctc 1412
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||||
Sbjct: 14496 caatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgctc 14555
Query: 1413 cagtgctaga 1422
|||| |||||
Sbjct: 14556 cagtactaga 14565
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 13070 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 13129
Query: 416 gacatctt 423
| ||||||
Sbjct: 13130 gccatctt 13137
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0054L03
Length = 183623
Score = 155 bits (78), Expect = 1e-034
Identities = 237/290 (81%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || |
Sbjct: 105818 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 105759
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| || || |||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 105758 tgtcctgttataagctccaaaagcataatcccataaccaaatacatcagttttctcagat 105699
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|| || || || || || || || || ||||| |||||||||||||||||||| || |||
Sbjct: 105698 gattttcctgttgaaagatattctggtgcaatatgcccaattgttccacgaactgcagtt 105639
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| ||||||||||||||||| ||||| || ||||| | || || || || || || ||
Sbjct: 105638 gttacatgggtatccttgtaatccattagtttggccaaaccaaagtcccctactacagct 105579
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggat 849
|| ||||| ||||| || | ||||||||||||||||||||| ||||||||
Sbjct: 105578 tcaaagtcttcatctaataaaatatttgcagctttgacatcacgatggat 105529
Score = 131 bits (66), Expect = 2e-027
Identities = 252/314 (80%)
Strand = Plus / Minus
Query: 983 ttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagt 1042
|||||||||||||| || || | ||||||||| || |||||||| ||||| || || |
Sbjct: 105313 ttagccatgtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaa 105254
Query: 1043 cggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagc 1102
|| || || || | || || |||||||||||||||||||| |||||||| ||||| ||
Sbjct: 105253 cgcagcagatttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagt 105194
Query: 1103 tcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagca 1162
|| ||||||||||| | |||||| |||||||| || || ||||| || || ||||| ||
Sbjct: 105193 tccccaccaggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgct 105134
Query: 1163 agccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaa 1222
| |||||||| || || || ||||| || |||||||| | |||||| || || |||||
Sbjct: 105133 aatcttcctttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaag 105074
Query: 1223 ttatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggact 1282
|||| ||||||||||| || || || | |||||| |||| ||||| |||||||||||
Sbjct: 105073 gtatctgttgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacc 105014
Query: 1283 tctggatcctcctc 1296
||||||||||||||
Sbjct: 105013 tctggatcctcctc 105000
Score = 77.8 bits (39), Expect = 2e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| || || |||||||| || |||||||| || ||||| || |
Sbjct: 117122 acccagtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgt 117063
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
|| || ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 117062 tgtcctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 117004
Score = 65.9 bits (33), Expect = 9e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggca 1497
|||| ||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 104633 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggca 104581
Score = 58.0 bits (29), Expect = 2e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||| ||||| || || |||||||| ||||| || || ||||| ||
Sbjct: 102836 actctgataacactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgacc 102777
Query: 1964 agagtgggatcccaact 1980
||||| || ||||||||
Sbjct: 102776 agagttgggtcccaact 102760
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 117596 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 117537
Query: 416 gacatctt 423
| ||||||
Sbjct: 117536 gccatctt 117529
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 116862 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 116803
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 116802 ggacagtcccctggcggaacccaatgcaatcc 116771
Score = 54.0 bits (27), Expect = 3e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 103416 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 103357
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||| || || |||||||| || ||||| ||||||
Sbjct: 103356 ctaggtatcgttccgcttatgttattactgtagagctcc 103318
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1353 caattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctc 1412
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||||
Sbjct: 104866 caatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgctc 104807
Query: 1413 cagtgctaga 1422
|||| |||||
Sbjct: 104806 cagtactaga 104797
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 106292 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 106233
Query: 416 gacatctt 423
| ||||||
Sbjct: 106232 gccatctt 106225
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 155 bits (78), Expect = 1e-034
Identities = 237/290 (81%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || |
Sbjct: 4110550 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 4110491
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| || || |||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4110490 tgtcctgttataagctccaaaagcataatcccataaccaaatacatcagttttctcagat 4110431
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|| || || || || || || || || ||||| |||||||||||||||||||| || |||
Sbjct: 4110430 gattttcctgttgaaagatattctggtgcaatatgcccaattgttccacgaactgcagtt 4110371
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| ||||||||||||||||| ||||| || ||||| | || || || || || || ||
Sbjct: 4110370 gttacatgggtatccttgtaatccattagtttggccaaaccaaagtcccctactacagct 4110311
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggat 849
|| ||||| ||||| || | ||||||||||||||||||||| ||||||||
Sbjct: 4110310 tcaaagtcttcatctaataaaatatttgcagctttgacatcacgatggat 4110261
Score = 131 bits (66), Expect = 2e-027
Identities = 252/314 (80%)
Strand = Plus / Minus
Query: 983 ttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagt 1042
|||||||||||||| || || | ||||||||| || |||||||| ||||| || || |
Sbjct: 4110045 ttagccatgtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaa 4109986
Query: 1043 cggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagc 1102
|| || || || | || || |||||||||||||||||||| |||||||| ||||| ||
Sbjct: 4109985 cgcagcagatttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagt 4109926
Query: 1103 tcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagca 1162
|| ||||||||||| | |||||| |||||||| || || ||||| || || ||||| ||
Sbjct: 4109925 tccccaccaggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgct 4109866
Query: 1163 agccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaa 1222
| |||||||| || || || ||||| || |||||||| | |||||| || || |||||
Sbjct: 4109865 aatcttcctttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaag 4109806
Query: 1223 ttatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggact 1282
|||| ||||||||||| || || || | |||||| |||| ||||| |||||||||||
Sbjct: 4109805 gtatctgttgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacc 4109746
Query: 1283 tctggatcctcctc 1296
||||||||||||||
Sbjct: 4109745 tctggatcctcctc 4109732
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 4207819 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 4207760
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 4207759 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 4207701
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 4207700 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 4207641
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 4207640 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 4207581
Query: 865 gtgatcatg 873
||||||||
Sbjct: 4207580 atgatcatg 4207572
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 4207299 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 4207240
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 4207239 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 4207180
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 4207179 ctaaaaccgcct 4207168
Score = 77.8 bits (39), Expect = 2e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| || || |||||||| || |||||||| || ||||| || |
Sbjct: 4121854 acccagtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgt 4121795
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
|| || ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4121794 tgtcctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 4121736
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 4206067 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 4206015
Score = 65.9 bits (33), Expect = 9e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggca 1497
|||| ||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 4109365 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggca 4109313
Score = 58.0 bits (29), Expect = 2e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||| ||||| || || |||||||| ||||| || || ||||| ||
Sbjct: 4107568 actctgataacactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgacc 4107509
Query: 1964 agagtgggatcccaact 1980
||||| || ||||||||
Sbjct: 4107508 agagttgggtcccaact 4107492
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 4122328 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 4122269
Query: 416 gacatctt 423
| ||||||
Sbjct: 4122268 gccatctt 4122261
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 4121594 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 4121535
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 4121534 ggacagtcccctggcggaacccaatgcaatcc 4121503
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 4207399 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 4207340
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 4207339 catacagaacccacg 4207325
Score = 54.0 bits (27), Expect = 3e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 4108148 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 4108089
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||| || || |||||||| || ||||| ||||||
Sbjct: 4108088 ctaggtatcgttccgcttatgttattactgtagagctcc 4108050
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1353 caattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctc 1412
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||||
Sbjct: 4109598 caatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgctc 4109539
Query: 1413 cagtgctaga 1422
|||| |||||
Sbjct: 4109538 cagtactaga 4109529
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 4111024 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 4110965
Query: 416 gacatctt 423
| ||||||
Sbjct: 4110964 gccatctt 4110957
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 4206469 caccttctagcatcctcaccacctcc 4206444
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065 genomic
scaffold, whole genome shotgun sequence
Length = 5026603
Score = 155 bits (78), Expect = 1e-034
Identities = 237/290 (81%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || |
Sbjct: 4210663 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 4210604
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| || || |||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4210603 tgtcctgttataagctccaaaagcataatcccataaccaaatacatcagttttctcagat 4210544
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|| || || || || || || || || ||||| |||||||||||||||||||| || |||
Sbjct: 4210543 gattttcctgttgaaagatattctggtgcaatatgcccaattgttccacgaactgcagtt 4210484
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| ||||||||||||||||| ||||| || ||||| | || || || || || || ||
Sbjct: 4210483 gttacatgggtatccttgtaatccattagtttggccaaaccaaagtcccctactacagct 4210424
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggat 849
|| ||||| ||||| || | ||||||||||||||||||||| ||||||||
Sbjct: 4210423 tcaaagtcttcatctaataaaatatttgcagctttgacatcacgatggat 4210374
Score = 131 bits (66), Expect = 2e-027
Identities = 252/314 (80%)
Strand = Plus / Minus
Query: 983 ttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagt 1042
|||||||||||||| || || | ||||||||| || |||||||| ||||| || || |
Sbjct: 4210158 ttagccatgtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaa 4210099
Query: 1043 cggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagc 1102
|| || || || | || || |||||||||||||||||||| |||||||| ||||| ||
Sbjct: 4210098 cgcagcagatttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagt 4210039
Query: 1103 tcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagca 1162
|| ||||||||||| | |||||| |||||||| || || ||||| || || ||||| ||
Sbjct: 4210038 tccccaccaggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgct 4209979
Query: 1163 agccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaa 1222
| |||||||| || || || ||||| || |||||||| | |||||| || || |||||
Sbjct: 4209978 aatcttcctttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaag 4209919
Query: 1223 ttatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggact 1282
|||| ||||||||||| || || || | |||||| |||| ||||| |||||||||||
Sbjct: 4209918 gtatctgttgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacc 4209859
Query: 1283 tctggatcctcctc 1296
||||||||||||||
Sbjct: 4209858 tctggatcctcctc 4209845
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 4304672 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 4304613
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 4304612 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 4304554
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 4304553 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 4304494
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 4304493 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 4304434
Query: 865 gtgatcatg 873
||||||||
Sbjct: 4304433 atgatcatg 4304425
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 4304152 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 4304093
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 4304092 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 4304033
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 4304032 ctaaaaccgcct 4304021
Score = 77.8 bits (39), Expect = 2e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| || || |||||||| || |||||||| || ||||| || |
Sbjct: 4221968 acccagtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgt 4221909
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
|| || ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4221908 tgtcctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 4221850
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 4302920 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 4302868
Score = 65.9 bits (33), Expect = 9e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggca 1497
|||| ||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 4209478 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggca 4209426
Score = 58.0 bits (29), Expect = 2e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||| ||||| || || |||||||| ||||| || || ||||| ||
Sbjct: 4207681 actctgataacactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgacc 4207622
Query: 1964 agagtgggatcccaact 1980
||||| || ||||||||
Sbjct: 4207621 agagttgggtcccaact 4207605
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 4222442 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 4222383
Query: 416 gacatctt 423
| ||||||
Sbjct: 4222382 gccatctt 4222375
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 4221708 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 4221649
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 4221648 ggacagtcccctggcggaacccaatgcaatcc 4221617
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 4304252 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 4304193
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 4304192 catacagaacccacg 4304178
Score = 54.0 bits (27), Expect = 3e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 4208261 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 4208202
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||| || || |||||||| || ||||| ||||||
Sbjct: 4208201 ctaggtatcgttccgcttatgttattactgtagagctcc 4208163
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1353 caattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctc 1412
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||||
Sbjct: 4209711 caatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgctc 4209652
Query: 1413 cagtgctaga 1422
|||| |||||
Sbjct: 4209651 cagtactaga 4209642
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 4211137 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 4211078
Query: 416 gacatctt 423
| ||||||
Sbjct: 4211077 gccatctt 4211070
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 4303322 caccttctagcatcctcaccacctcc 4303297
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 155 bits (78), Expect = 1e-034
Identities = 237/290 (81%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || |
Sbjct: 4210663 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 4210604
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| || || |||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4210603 tgtcctgttataagctccaaaagcataatcccataaccaaatacatcagttttctcagat 4210544
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|| || || || || || || || || ||||| |||||||||||||||||||| || |||
Sbjct: 4210543 gattttcctgttgaaagatattctggtgcaatatgcccaattgttccacgaactgcagtt 4210484
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| ||||||||||||||||| ||||| || ||||| | || || || || || || ||
Sbjct: 4210483 gttacatgggtatccttgtaatccattagtttggccaaaccaaagtcccctactacagct 4210424
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggat 849
|| ||||| ||||| || | ||||||||||||||||||||| ||||||||
Sbjct: 4210423 tcaaagtcttcatctaataaaatatttgcagctttgacatcacgatggat 4210374
Score = 131 bits (66), Expect = 2e-027
Identities = 252/314 (80%)
Strand = Plus / Minus
Query: 983 ttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagt 1042
|||||||||||||| || || | ||||||||| || |||||||| ||||| || || |
Sbjct: 4210158 ttagccatgtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaa 4210099
Query: 1043 cggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagc 1102
|| || || || | || || |||||||||||||||||||| |||||||| ||||| ||
Sbjct: 4210098 cgcagcagatttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagt 4210039
Query: 1103 tcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagca 1162
|| ||||||||||| | |||||| |||||||| || || ||||| || || ||||| ||
Sbjct: 4210038 tccccaccaggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgct 4209979
Query: 1163 agccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaa 1222
| |||||||| || || || ||||| || |||||||| | |||||| || || |||||
Sbjct: 4209978 aatcttcctttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaag 4209919
Query: 1223 ttatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggact 1282
|||| ||||||||||| || || || | |||||| |||| ||||| |||||||||||
Sbjct: 4209918 gtatctgttgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacc 4209859
Query: 1283 tctggatcctcctc 1296
||||||||||||||
Sbjct: 4209858 tctggatcctcctc 4209845
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 4304672 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 4304613
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 4304612 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 4304554
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 4304553 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 4304494
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 4304493 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 4304434
Query: 865 gtgatcatg 873
||||||||
Sbjct: 4304433 atgatcatg 4304425
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 4304152 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 4304093
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 4304092 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 4304033
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 4304032 ctaaaaccgcct 4304021
Score = 77.8 bits (39), Expect = 2e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| || || |||||||| || |||||||| || ||||| || |
Sbjct: 4221968 acccagtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgt 4221909
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
|| || ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4221908 tgtcctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 4221850
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 4302920 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 4302868
Score = 65.9 bits (33), Expect = 9e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggca 1497
|||| ||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 4209478 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggca 4209426
Score = 58.0 bits (29), Expect = 2e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||| ||||| || || |||||||| ||||| || || ||||| ||
Sbjct: 4207681 actctgataacactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgacc 4207622
Query: 1964 agagtgggatcccaact 1980
||||| || ||||||||
Sbjct: 4207621 agagttgggtcccaact 4207605
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 4222442 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 4222383
Query: 416 gacatctt 423
| ||||||
Sbjct: 4222382 gccatctt 4222375
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 4221708 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 4221649
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 4221648 ggacagtcccctggcggaacccaatgcaatcc 4221617
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 4304252 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 4304193
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 4304192 catacagaacccacg 4304178
Score = 54.0 bits (27), Expect = 3e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 4208261 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 4208202
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||| || || |||||||| || ||||| ||||||
Sbjct: 4208201 ctaggtatcgttccgcttatgttattactgtagagctcc 4208163
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1353 caattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctc 1412
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||||
Sbjct: 4209711 caatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgctc 4209652
Query: 1413 cagtgctaga 1422
|||| |||||
Sbjct: 4209651 cagtactaga 4209642
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 4211137 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 4211078
Query: 416 gacatctt 423
| ||||||
Sbjct: 4211077 gccatctt 4211070
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 4303322 caccttctagcatcctcaccacctcc 4303297
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 155 bits (78), Expect = 1e-034
Identities = 237/290 (81%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || |
Sbjct: 4343024 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 4342965
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| || || |||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4342964 tgtcctgttataagctccaaaagcataatcccataaccaaatacatcagttttctcagat 4342905
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|| || || || || || || || || ||||| |||||||||||||||||||| || |||
Sbjct: 4342904 gattttcctgttgaaagatattctggtgcaatatgcccaattgttccacgaactgcagtt 4342845
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| ||||||||||||||||| ||||| || ||||| | || || || || || || ||
Sbjct: 4342844 gttacatgggtatccttgtaatccattagtttggccaaaccaaagtcccctactacagct 4342785
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggat 849
|| ||||| ||||| || | ||||||||||||||||||||| ||||||||
Sbjct: 4342784 tcaaagtcttcatctaataaaatatttgcagctttgacatcacgatggat 4342735
Score = 131 bits (66), Expect = 2e-027
Identities = 252/314 (80%)
Strand = Plus / Minus
Query: 983 ttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaagt 1042
|||||||||||||| || || | ||||||||| || |||||||| ||||| || || |
Sbjct: 4342519 ttagccatgtatggatacacaagcaacctttctgtgggtgtcatacagaaccctcgtaaa 4342460
Query: 1043 cggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactgaagc 1102
|| || || || | || || |||||||||||||||||||| |||||||| ||||| ||
Sbjct: 4342459 cgcagcagatttctatgtacagccatgctaatcatctcaacttctgtttgaaactgtagt 4342400
Query: 1103 tcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccatcagca 1162
|| ||||||||||| | |||||| |||||||| || || ||||| || || ||||| ||
Sbjct: 4342399 tccccaccaggtgttctctcctcctttagtctcttaacagctactaaagaaccatctgct 4342340
Query: 1163 agccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaaa 1222
| |||||||| || || || ||||| || |||||||| | |||||| || || |||||
Sbjct: 4342339 aatcttcctttatagaccttgccaaacccacctcttccgagaatgtttttattgctgaag 4342280
Query: 1223 ttatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagatggact 1282
|||| ||||||||||| || || || | |||||| |||| ||||| |||||||||||
Sbjct: 4342279 gtatctgttgcaacttgtagttctcgtagtgaaaatcttttaagctggccaagatggacc 4342220
Query: 1283 tctggatcctcctc 1296
||||||||||||||
Sbjct: 4342219 tctggatcctcctc 4342206
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 4440293 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 4440234
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 4440233 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 4440175
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 4440174 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 4440115
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 4440114 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 4440055
Query: 865 gtgatcatg 873
||||||||
Sbjct: 4440054 atgatcatg 4440046
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 4439773 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 4439714
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 4439713 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 4439654
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 4439653 ctaaaaccgcct 4439642
Score = 77.8 bits (39), Expect = 2e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| || || |||||||| || |||||||| || ||||| || |
Sbjct: 4354328 acccagtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgt 4354269
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
|| || ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 4354268 tgtcctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 4354210
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 4438541 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 4438489
Score = 65.9 bits (33), Expect = 9e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1445 ggagatggaggattgaatggaggaggtggggaaaagggaggagccccagggca 1497
|||| ||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 4341839 ggagttggaggattatatggaggaggtggggaaaaggggggagcaccagggca 4341787
Score = 58.0 bits (29), Expect = 2e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||| ||||| || || |||||||| ||||| || || ||||| ||
Sbjct: 4340042 actctgataacactgttgtcgttattgcaagtaacatgaaaccaagtgcacggattgacc 4339983
Query: 1964 agagtgggatcccaact 1980
||||| || ||||||||
Sbjct: 4339982 agagttgggtcccaact 4339966
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 4354802 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 4354743
Query: 416 gacatctt 423
| ||||||
Sbjct: 4354742 gccatctt 4354735
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 4354068 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 4354009
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 4354008 ggacagtcccctggcggaacccaatgcaatcc 4353977
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 4439873 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 4439814
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 4439813 catacagaacccacg 4439799
Score = 54.0 bits (27), Expect = 3e-004
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||
Sbjct: 4340622 ccagtgaagttgttcaagtacaaatccaaactgaccaagtttgtgaggtttccaagttca 4340563
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||| || || |||||||| || ||||| ||||||
Sbjct: 4340562 ctaggtatcgttccgcttatgttattactgtagagctcc 4340524
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1353 caattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctc 1412
|||| ||||||| |||||| | ||| ||||| |||||||| || || ||||| |||||||
Sbjct: 4342072 caatagcaggaatagcaaatagcaaggctgctccagcagccactccaccagcaattgctc 4342013
Query: 1413 cagtgctaga 1422
|||| |||||
Sbjct: 4342012 cagtactaga 4342003
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||| ||||||
Sbjct: 4343498 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcacaacctcc 4343439
Query: 416 gacatctt 423
| ||||||
Sbjct: 4343438 gccatctt 4343431
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 4438943 caccttctagcatcctcaccacctcc 4438918
>gb|BF889447.1|BF889447 EST016 Magnaporthe grisea infected 16-day-old rice seedling cDNA
library Oryza sativa (japonica cultivar-group) cDNA clone
BFR16 5', mRNA sequence
Length = 425
Score = 149 bits (75), Expect = 7e-033
Identities = 194/234 (82%)
Strand = Plus / Minus
Query: 1183 tccaaaaccgcctcttcctaaaatgttcttgttactgaaattatcagttgcaacttgaag 1242
|||||| || |||||||| | ||| ||||| || || || |||||||| || ||||||||
Sbjct: 425 tccaaagccacctcttcccagaatattcttattgctaaagttatcagtagcnacttgaag 366
Query: 1243 ctcccgcaatgaaaactttttgagctgaccaagatggacttctggatcctcctcggcagg 1302
|||||| | ||| || | || || || ||||| || ||||| ||||||||||| |||||
Sbjct: 365 ctcccggagtgagaatctcttaagttggccaaggtgcacttccggatcctcctcagcagg 306
Query: 1303 aacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaattgcagg 1362
||||| ||||| || |||||||||||||| || |||||| ||||||| ||||||| ||
Sbjct: 305 gacatcaaagaagtgttcttcaggtttacgccgccgccaccatgcaaatccaattgccgg 246
Query: 1363 aacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||
Sbjct: 245 aaccgcaaacagcaatgcagcagctgcagcaacacctccagcaattgctccagt 192
Score = 115 bits (58), Expect = 1e-022
Identities = 106/122 (86%)
Strand = Plus / Minus
Query: 1454 ggattgaatggaggaggtggggaaaagggaggagccccagggcagggcttcgaagtacca 1513
|||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | ||||||
Sbjct: 157 ggattgaaaggaggtggtggagaaaaaggtggagctccagggcagggttttgtagtaccc 98
Query: 1514 gggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaaaaggagcca 1573
||||||||||||| | ||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 97 gggccacaaagatctttattattagcaaaacttataggggtaaagagtgaaaaggagcca 38
Query: 1574 gt 1575
||
Sbjct: 37 gt 36
>dbj|AB188248.1| Oryza sativa (japonica cultivar-group) ORK1 mRNA for SERK family
receptor-like protein kinase, partial cds
Length = 1363
Score = 115 bits (58), Expect = 1e-022
Identities = 327/414 (78%), Gaps = 2/414 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 545 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 486
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 485 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 427
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 426 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 367
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 366 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 307
Query: 865 gtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaatccgtcttcttggttc 924
|||||||| || || || || || || ||||| || ||| |||| |||||||| ||
Sbjct: 306 atgatcatgtaaataggacagccccctggcagaacctgctgcgatccttcttcttgtttg 247
Query: 925 ccagctaagaggtggctcagatggctgccgctctcgtaaacgtgatgccacactcccgtt 984
||| ||| || || |||||||| | || |||| | |||||| || ||||| || ||
Sbjct: 246 ccaatcaagtggaggttcagatggtggtcgttctctcagacgtgaagcaacacttccatt 187
Query: 985 agccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacg 1038
|||||||||||| || || | ||||||||| || |||||||| ||||| |||||
Sbjct: 186 agccatgtatggatacacaagcaacctttctgtgggtgtcatacagaacccacg 133
Score = 69.9 bits (35), Expect = 5e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 107 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 48
Query: 1124 tcttttagtct 1134
|| ||||||||
Sbjct: 47 tcctttagtct 37
>gb|D25047.1|D25047 RICR2976A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2976_1A, mRNA sequence
Length = 299
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 289 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 230
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 229 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 171
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 170 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 111
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 110 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 51
Query: 865 gtgatcatg 873
||||||||
Sbjct: 50 atgatcatg 42
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0583B06
Length = 134442
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 6183 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 6124
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 6123 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 6065
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 6064 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 6005
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 6004 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 5945
Query: 865 gtgatcatg 873
||||||||
Sbjct: 5944 atgatcatg 5936
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 5663 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 5604
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 5603 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 5544
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 5543 ctaaaaccgcct 5532
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 4431 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 4379
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 5763 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 5704
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 5703 catacagaacccacg 5689
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 4833 caccttctagcatcctcaccacctcc 4808
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1134_B10
Length = 115074
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 87469 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 87410
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 87409 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 87351
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 87350 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 87291
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 87290 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 87231
Query: 865 gtgatcatg 873
||||||||
Sbjct: 87230 atgatcatg 87222
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 86949 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 86890
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 86889 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 86830
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 86829 ctaaaaccgcct 86818
Score = 77.8 bits (39), Expect = 2e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||||||| || ||||| || || |||||||| || |||||||| || ||||| || |
Sbjct: 1504 acccagtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgt 1445
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
|| || ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 1444 tgtcctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 1386
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 85717 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 85665
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 1978 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 1919
Query: 416 gacatctt 423
| ||||||
Sbjct: 1918 gccatctt 1911
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 1244 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 1185
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 1184 ggacagtcccctggcggaacccaatgcaatcc 1153
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 87049 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 86990
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 86989 catacagaacccacg 86975
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 86119 caccttctagcatcctcaccacctcc 86094
>gb|AACV01017402.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017402, whole
genome shotgun sequence
Length = 12108
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 3627 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 3686
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 3687 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 3745
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 3746 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 3805
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 3806 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 3865
Query: 865 gtgatcatg 873
||||||||
Sbjct: 3866 atgatcatg 3874
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Plus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 4147 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 4206
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 4207 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 4266
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 4267 ctaaaaccgcct 4278
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 5379 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 5431
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 4047 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 4106
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 4107 catacagaacccacg 4121
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 4977 caccttctagcatcctcaccacctcc 5002
>dbj|AB188249.1| Oryza sativa (japonica cultivar-group) ORK1 gene for SERK family
receptor-like protein kinase, partial cds
Length = 5675
Score = 105 bits (53), Expect = 1e-019
Identities = 202/249 (81%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga-agactt 684
||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||| ||
Sbjct: 3402 gtaataagctccaaaagcatgattccatagccaaatacatcagttttctcagagagaatt 3343
Query: 685 gccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgac 744
|| || || || || || || ||||| || |||||||||||| | || || ||||| ||
Sbjct: 3342 -cctgttgaaagatattctggtgcaatatgtccaattgttccatgtactgcagttgttac 3284
Query: 745 atgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaa 804
||||||||||||||| ||||| | ||||| | || ||||| || | || || || ||
Sbjct: 3283 atgggtatccttgtaatccattggtttggccaaaccaaaatctccaaatacagcttcaaa 3224
Query: 805 gtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgca 864
||| ||||| || | ||||||||| ||||||||||| ||||||||||| || || | |||
Sbjct: 3223 gtcttcatctaataaaatatttgccgctttgacatcacgatggatgatctttgggttgca 3164
Query: 865 gtgatcatg 873
||||||||
Sbjct: 3163 atgatcatg 3155
Score = 79.8 bits (40), Expect = 6e-012
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 2882 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 2823
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 2822 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 2763
Query: 1184 ccaaaaccgcct 1195
| ||||||||||
Sbjct: 2762 ctaaaaccgcct 2751
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 1650 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 1598
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 2982 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 2923
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 2922 catacagaacccacg 2908
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 390 caccttcgagcatcctcaccacctcc 415
||||||| ||||||||||||||||||
Sbjct: 2052 caccttctagcatcctcaccacctcc 2027
>gb|CB679880.1|CB679880 OSJNEf03P06.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03P06 3', mRNA sequence
Length = 835
Score = 85.7 bits (43), Expect = 9e-014
Identities = 142/175 (81%)
Strand = Plus / Plus
Query: 504 tctgcagatctgggtccaccagcatctccaccttcttctccttcaacagtcctttcaccc 563
|||| |||||||| || |||| |||||||| | |||||||| | | |||||| ||||
Sbjct: 424 tctgtagatctggatcaaccaacatctccagccgtttctccttgagtaatccttttaccc 483
Query: 564 agtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggc 623
|||| || ||||| || || |||||||| || |||||||| || ||||| || | || |
Sbjct: 484 agtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgttgtc 543
Query: 624 cagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
| ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 544 ctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 598
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 740 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 799
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 800 ggacagtcccctggcggaacccaatgcaatcc 831
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 276 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 335
Query: 416 gacatctt 423
| ||||||
Sbjct: 336 gccatctt 343
>dbj|AK060589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C11, full
insert sequence
Length = 1782
Score = 85.7 bits (43), Expect = 9e-014
Identities = 142/175 (81%)
Strand = Plus / Minus
Query: 504 tctgcagatctgggtccaccagcatctccaccttcttctccttcaacagtcctttcaccc 563
|||| |||||||| || |||| |||||||| | |||||||| | | |||||| ||||
Sbjct: 1388 tctgtagatctggatcaaccaacatctccagccgtttctccttgagtaatccttttaccc 1329
Query: 564 agtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggc 623
|||| || ||||| || || |||||||| || |||||||| || ||||| || | || |
Sbjct: 1328 agtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgttgtc 1269
Query: 624 cagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
| ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 1268 ctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 1214
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 1536 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 1477
Query: 416 gacatctt 423
| ||||||
Sbjct: 1476 gccatctt 1469
Score = 52.0 bits (26), Expect = 0.001
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggat 849
||||||||||||||||||||| ||||||||
Sbjct: 1072 aatatttgcagctttgacatcacgatggat 1043
>dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L06, full
insert sequence
Length = 4009
Score = 85.7 bits (43), Expect = 9e-014
Identities = 142/175 (81%)
Strand = Plus / Minus
Query: 504 tctgcagatctgggtccaccagcatctccaccttcttctccttcaacagtcctttcaccc 563
|||| |||||||| || |||| |||||||| | |||||||| | | |||||| ||||
Sbjct: 3642 tctgtagatctggatcaaccaacatctccagccgtttctccttgagtaatccttttaccc 3583
Query: 564 agtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggc 623
|||| || ||||| || || |||||||| || |||||||| || ||||| || | || |
Sbjct: 3582 agtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgttgtc 3523
Query: 624 cagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
| ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 3522 ctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 3468
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 3790 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 3731
Query: 416 gacatctt 423
| ||||||
Sbjct: 3730 gccatctt 3723
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 3326 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 3267
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 3266 ggacagtcccctggcggaacccaatgcaatcc 3235
>ref|XM_480326.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 4009
Score = 85.7 bits (43), Expect = 9e-014
Identities = 142/175 (81%)
Strand = Plus / Minus
Query: 504 tctgcagatctgggtccaccagcatctccaccttcttctccttcaacagtcctttcaccc 563
|||| |||||||| || |||| |||||||| | |||||||| | | |||||| ||||
Sbjct: 3642 tctgtagatctggatcaaccaacatctccagccgtttctccttgagtaatccttttaccc 3583
Query: 564 agtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggc 623
|||| || ||||| || || |||||||| || |||||||| || ||||| || | || |
Sbjct: 3582 agtccagtagcatgacgtcatcatcattggctagacgagcaaggtcaaaggcacgttgtc 3523
Query: 624 cagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
| ||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 3522 ctgtaataagctccaaaagcataatcccataaccaaatacatcagttttctcaga 3468
Score = 56.0 bits (28), Expect = 8e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 356 ttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctcc 415
|||||||| || ||||| | ||| || || || |||||||| ||||||||||||||||||
Sbjct: 3790 ttctgccactcctcccatctctcggcaaggccatcaccttcaagcatcctcaccacctcc 3731
Query: 416 gacatctt 423
| ||||||
Sbjct: 3730 gccatctt 3723
Score = 56.0 bits (28), Expect = 8e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 820 aatatttgcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagta 879
||||||||||||||||||||| |||||||| || || || || || |||||||| || ||
Sbjct: 3326 aatatttgcagctttgacatcacgatggataatctttgggtcacaatgatcatgtaaata 3267
Query: 880 agaaagtcctcttgcagatcccagtgcaatcc 911
|| ||||| || || || |||| ||||||||
Sbjct: 3266 ggacagtcccctggcggaacccaatgcaatcc 3235
>gb|CF322960.1|CF322960 HDN--02-I17.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-I17, mRNA sequence
Length = 385
Score = 79.8 bits (40), Expect = 6e-012
Identities = 259/332 (78%)
Strand = Plus / Minus
Query: 707 gcaatgtgcccaattgttccacgaacagctgttgtgacatgggtatccttgtagtccata 766
||||| || |||||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct: 384 gcaatatgtccaattgttccatgtactgcagttgttacatgggtatccttgtaatccatt 325
Query: 767 agcttggcaagcccgaaatcacccacaactgcctcgaagtcctcatccaaaagaatattt 826
| ||||| | || ||||| || | || || || ||||| ||||| || | |||||||
Sbjct: 324 ggtttggccaaaccaaaatctccaaatacagcttcaaagtcttcatctaataaaatattt 265
Query: 827 gcagctttgacatcccgatggatgattttgggatcgcagtgatcatgcaagtaagaaagt 886
|| ||||||||||| ||||||||||| || || | ||| |||||||| || || || ||
Sbjct: 264 gccgctttgacatcacgatggatgatctttgggttgcaatgatcatgtaaataggacagc 205
Query: 887 cctcttgcagatcccagtgcaatccgtcttcttggttcccagctaagaggtggctcagat 946
|| || ||||| || ||| |||| |||||||| || ||| ||| || || ||||||
Sbjct: 204 cccctggcagaacctgctgcgatccttcttcttgtttgccaatcaagtggaggttcagat 145
Query: 947 ggctgccgctctcgtaaacgtgatgccacactcccgttagccatgtatgggtagactaac 1006
|| | || |||| | |||||| || ||||| || |||||||||||||| || || | |
Sbjct: 144 ggtggtcgttctctcagacgtgaagcaacacttccattagccatgtatggatacacaagc 85
Query: 1007 aacctttcagtaggtgtcatgcagaaaccacg 1038
|||||||| || |||||||| ||||| |||||
Sbjct: 84 aacctttctgtgggtgtcatacagaacccacg 53
>gb|AU095162.1|AU095162 AU095162 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60419, mRNA sequence
Length = 428
Score = 77.8 bits (39), Expect = 2e-011
Identities = 108/131 (82%)
Strand = Plus / Minus
Query: 1064 gccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcc 1123
|||||||||||||||||||| |||||||| ||||| || || ||||||||||| | || |
Sbjct: 131 gccatgctaatcatctcaacttctgtttgaaactgtagttccccaccaggtgttctctgc 72
Query: 1124 tcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtacactttt 1183
|| |||||||| || || ||||| || || ||||| || || |||||||| || || ||
Sbjct: 71 tcctttagtctcttaacagctactaaagaaccatctgctagtcttcctttatagaccttg 12
Query: 1184 ccaaaaccgcc 1194
| |||||||||
Sbjct: 11 ctaaaaccgcc 1
Score = 54.0 bits (27), Expect = 3e-004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 964 acgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagtaggtgt 1023
|||||| || ||||| || |||||||||||||| || || | ||||||||| || |||||
Sbjct: 231 acgtgaagcaacacttccattagccatgtatggatacacaagcaacctttctgtgggtgt 172
Query: 1024 catgcagaaaccacg 1038
||| ||||| |||||
Sbjct: 171 catacagaacccacg 157
>dbj|AP004874.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0462B05, ***
SEQUENCING IN PROGRESS ***
Length = 157394
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 138265 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 138206
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 138205 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 138155
>dbj|AK066118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F13, full
insert sequence
Length = 2968
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 2203 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 2144
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 2143 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 2093
>dbj|AK102120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084N08, full
insert sequence
Length = 2415
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 1688 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 1629
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 1628 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 1578
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0018M09
Length = 157377
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 57016 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 56957
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 56956 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 56906
>gb|AACV01003913.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003913, whole
genome shotgun sequence
Length = 38306
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 24619 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 24678
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 24679 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 24729
>ref|XM_464966.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2415
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 1688 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 1629
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 1628 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 1578
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 4672278 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 4672219
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 4672218 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 4672168
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 10641143 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 10641084
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 10641083 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 10641033
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 10641143 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 10641084
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 10641083 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 10641033
Score = 48.1 bits (24), Expect = 0.020
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 gtcttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaa 719
||||||||||| |||| |||||| || ||||| || || |||||||||||||
Sbjct: 30280884 gtcttctcagatgactggccggtggagaggtattccggggcaatgtgcccaa 30280935
Score = 44.1 bits (22), Expect = 0.31
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 368 tcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatc 421
||||| ||||||||||| || || || || |||||||| |||||||| ||||||
Sbjct: 30280471 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatc 30280524
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 77.8 bits (39), Expect = 2e-011
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 619 ctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 10639326 ctggccagtcacaagctcaagaagcatgatcccgtagccaaaaacatcagttctctctga 10639267
Query: 679 agacttgccggtagataggtactcgggagcaatgtgcccaattgttccacg 729
||||| || || ||||| || || || || ||||| || |||||||||||
Sbjct: 10639266 tgacttccctgtggatagatattcaggtgctatgtgacccattgttccacg 10639216
Score = 48.1 bits (24), Expect = 0.020
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 gtcttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaa 719
||||||||||| |||| |||||| || ||||| || || |||||||||||||
Sbjct: 30335594 gtcttctcagatgactggccggtggagaggtattccggggcaatgtgcccaa 30335645
Score = 44.1 bits (22), Expect = 0.31
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 368 tcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatc 421
||||| ||||||||||| || || || || |||||||| |||||||| ||||||
Sbjct: 30335181 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatc 30335234
>gb|AZ133092.1|AZ133092 OSJNBb0108O22r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0108O22r, DNA
sequence
Length = 710
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 626 gtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcaga 678
||||||||||||| ||||||||||||||||||| | |||||||| ||||||||
Sbjct: 55 gtaataagctccaaaagcatgatcccatagccatatacatcagttttctcaga 3
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 398 agcatcctcaccacctccgacatctt 423
||||||||||||||||||| ||||||
Sbjct: 449 agcatcctcaccacctccgccatctt 424
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,973,317
Number of Sequences: 438736
Number of extensions: 2973317
Number of successful extensions: 22268
Number of sequences better than 0.5: 147
Number of HSP's better than 0.5 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20194
Number of HSP's gapped (non-prelim): 2044
length of query: 2136
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2114
effective length of database: 2,790,767,724
effective search space: 5899682968536
effective search space used: 5899682968536
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)