BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204486.2.1
(607 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB651417.1|CB651417 OSJNEb16F21.r OSJNEb Oryza sativa (j... 448 e-123
dbj|AK058745.1| Oryza sativa (japonica cultivar-group) cDNA... 448 e-123
dbj|AK070036.1| Oryza sativa (japonica cultivar-group) cDNA... 448 e-123
dbj|AK102216.1| Oryza sativa (japonica cultivar-group) cDNA... 448 e-123
dbj|AP002483.1| Oryza sativa (japonica cultivar-group) geno... 448 e-123
dbj|AP003311.2| Oryza sativa (japonica cultivar-group) geno... 448 e-123
gb|AACV01000167.1| Oryza sativa (japonica cultivar-group) c... 448 e-123
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 448 e-123
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 448 e-123
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 448 e-123
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 448 e-123
ref|NM_184319.2| Oryza sativa (japonica cultivar-group), mRNA 448 e-123
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 448 e-123
gb|CB657918.1|CB657918 OSJNEc13J12.r OSJNEc Oryza sativa (j... 440 e-121
dbj|AK105664.1| Oryza sativa (japonica cultivar-group) cDNA... 440 e-121
gb|AU102191.1|AU102191 AU102191 Rice panicle at flowering s... 438 e-120
gb|CB660500.1|CB660500 OSJNEd02F13.r OSJNEd Oryza sativa (j... 432 e-119
gb|CB669400.1|CB669400 OSJNEe01N14.r OSJNEe Oryza sativa (j... 416 e-114
dbj|AG213652.1| Oryza sativa (japonica cultivar-group) DNA,... 385 e-104
gb|AU092492.1|AU092492 AU092492 Rice callus Oryza sativa (j... 377 e-102
gb|CB665182.1|CB665182 OSJNEd11G01.r OSJNEd Oryza sativa (j... 353 7e-095
gb|C98524.1|C98524 C98524 Rice panicle at flowering stage O... 345 2e-092
gb|AU055922.1|AU055922 AU055922 Oryza sativa mature leaf Ni... 343 7e-092
gb|C27322.1|C27322 C27322 Rice callus cDNA Oryza sativa (ja... 307 4e-081
gb|AU029667.1|AU029667 AU029667 Rice panicle shorter than 3... 258 3e-066
gb|AU097146.1|AU097146 AU097146 Rice shoot Oryza sativa (ja... 222 2e-055
dbj|AK100112.1| Oryza sativa (japonica cultivar-group) cDNA... 222 2e-055
dbj|AK106932.1| Oryza sativa (japonica cultivar-group) cDNA... 222 2e-055
dbj|AP005869.3| Oryza sativa (japonica cultivar-group) geno... 222 2e-055
gb|AACV01014989.1| Oryza sativa (japonica cultivar-group) c... 222 2e-055
ref|XM_476341.1| Oryza sativa (japonica cultivar-group), mRNA 222 2e-055
ref|XM_506127.1| PREDICTED Oryza sativa (japonica cultivar-... 222 2e-055
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 222 2e-055
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 222 2e-055
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 222 2e-055
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 222 2e-055
gb|CB660499.1|CB660499 OSJNEd02F13.f OSJNEd Oryza sativa (j... 194 4e-047
gb|CB653007.1|CB653007 OSJNEc03J23.r OSJNEc Oryza sativa (j... 184 4e-044
dbj|AP003791.4| Oryza sativa (japonica cultivar-group) geno... 109 2e-021
gb|AACV01002870.1| Oryza sativa (japonica cultivar-group) c... 109 2e-021
ref|NM_190326.1| Oryza sativa (japonica cultivar-group), p... 109 2e-021
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 109 2e-021
dbj|AP006757.2| Oryza sativa (japonica cultivar-group) geno... 109 2e-021
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-021
gb|AACV01002875.1| Oryza sativa (japonica cultivar-group) c... 100 2e-018
ref|NM_190327.1| Oryza sativa (japonica cultivar-group), p... 100 2e-018
gb|AACV01002343.1| Oryza sativa (japonica cultivar-group) c... 94 1e-016
ref|NM_191215.1| Oryza sativa (japonica cultivar-group), p... 94 1e-016
dbj|AP003076.3| Oryza sativa (japonica cultivar-group) geno... 94 1e-016
dbj|AP003942.1| Oryza sativa (japonica cultivar-group) chro... 92 4e-016
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 92 4e-016
gb|AACV01013655.1| Oryza sativa (japonica cultivar-group) c... 92 4e-016
dbj|AP003524.3| Oryza sativa (japonica cultivar-group) geno... 92 4e-016
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 92 4e-016
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 92 4e-016
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 92 4e-016
gb|AACV01002869.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
gb|AQ840751.1|AQ840751 nbxb0068N15r CUGI Rice BAC Library O... 82 4e-013
gb|CB669344.1|CB669344 OSJNEe01M06.r OSJNEe Oryza sativa (j... 76 2e-011
dbj|D84400.1| Oryza sativa (japonica cultivar-group) poxA g... 76 2e-011
gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica ... 76 2e-011
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|AC105769.2| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|AC108502.3| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|AACV01012240.1| Oryza sativa (japonica cultivar-group) c... 76 2e-011
gb|AACV01020641.1| Oryza sativa (japonica cultivar-group) c... 76 2e-011
ref|NM_194556.1| Oryza sativa (japonica cultivar-group) put... 76 2e-011
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 76 2e-011
ref|XM_475278.1| Oryza sativa (japonica cultivar-group), p... 76 2e-011
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 76 2e-011
gb|CH401243.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 76 2e-011
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 76 2e-011
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CB647870.1|CB647870 OSJNEb10P21.r OSJNEb Oryza sativa (j... 74 1e-010
gb|AC098694.3| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
dbj|AP003857.3| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AACV01018891.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
gb|AACV01018893.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
gb|AACV01020673.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
ref|NM_194578.1| Oryza sativa (japonica cultivar-group) put... 74 1e-010
ref|XM_483444.1| Oryza sativa (japonica cultivar-group), mRNA 74 1e-010
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 74 1e-010
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AC079685.2| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|AACV01010703.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
ref|XM_474472.1| Oryza sativa (japonica cultivar-group), p... 70 2e-009
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 70 2e-009
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromoso... 70 2e-009
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|AU173459.1|AU173459 AU173459 Rice root Oryza sativa (jap... 68 6e-009
gb|CA999125.1|CA999125 S234N_E06 Rice cold stress germinati... 68 6e-009
gb|CB646897.1|CB646897 OSJNEb09J13.f OSJNEb Oryza sativa (j... 68 6e-009
gb|CB646898.1|CB646898 OSJNEb09J13.r OSJNEb Oryza sativa (j... 68 6e-009
gb|CB653136.1|CB653136 OSJNEc03N24.r OSJNEc Oryza sativa (j... 68 6e-009
gb|CB653729.1|CB653729 OSJNEc05A15.r OSJNEc Oryza sativa (j... 68 6e-009
gb|CB654409.1|CB654409 OSJNEc06M15.r OSJNEc Oryza sativa (j... 68 6e-009
gb|CB656554.1|CB656554 OSJNEc11A16.r OSJNEc Oryza sativa (j... 68 6e-009
gb|CB670836.1|CB670836 OSJNEe04B23.r OSJNEe Oryza sativa (j... 68 6e-009
gb|CB678057.1|CB678057 OSJNEe15J18.r OSJNEe Oryza sativa (j... 68 6e-009
gb|CB678229.1|CB678229 OSJNEe15O13.r OSJNEe Oryza sativa (j... 68 6e-009
gb|CB684251.1|CB684251 OSJNEf13J08.r OSJNEf Oryza sativa (j... 68 6e-009
dbj|AP003566.3| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
dbj|AK068679.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
dbj|AK068840.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
dbj|AK103248.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
gb|AACV01002762.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|AACV01020663.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
ref|NM_190802.1| Oryza sativa (japonica cultivar-group), p... 68 6e-009
ref|NM_190803.1| Oryza sativa (japonica cultivar-group), p... 68 6e-009
ref|NM_194571.1| Oryza sativa (japonica cultivar-group) put... 68 6e-009
dbj|AP003235.2| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
dbj|AP004669.3| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
gb|AQ690275.1|AQ690275 nbxb0081D04r CUGI Rice BAC Library O... 66 2e-008
gb|CB668869.1|CB668869 OSJNEd16O19.r OSJNEd Oryza sativa (j... 66 2e-008
dbj|AK109931.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
gb|AACV01005232.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
ref|XM_467305.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-008
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 66 2e-008
dbj|AP004778.3| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|AU097135.1|AU097135 AU097135 Rice shoot Oryza sativa (ja... 64 9e-008
gb|CB637222.1|CB637222 OSJNEa03I18.r OSJNEa Oryza sativa (j... 60 1e-006
gb|CB638003.1|CB638003 OSJNEa05L16.r OSJNEa Oryza sativa (j... 60 1e-006
gb|CB652421.1|CB652421 OSJNEc02F04.r OSJNEc Oryza sativa (j... 60 1e-006
gb|AACV01001557.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
ref|NM_193465.1| Oryza sativa (japonica cultivar-group), p... 60 1e-006
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 60 1e-006
dbj|AP003372.2| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
dbj|AP003443.4| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 60 1e-006
gb|AU070869.1|AU070869 AU070869 Rice cDNA from young root O... 58 6e-006
gb|AU108195.1|AU108195 AU108195 Rice cDNA from young root O... 58 6e-006
gb|AACV01005295.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
ref|XM_467477.1| Oryza sativa (japonica cultivar-group), mRNA 58 6e-006
dbj|AP004047.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AP004098.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
gb|AACV01002765.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01010423.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
ref|XM_462680.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_473735.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 56 2e-005
ref|NT_107105.1| Oryza sativa genomic DNA, chromosome 4, BA... 56 2e-005
emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromoso... 56 2e-005
gb|CB649378.1|CB649378 OSJNEb13E09.r OSJNEb Oryza sativa (j... 54 9e-005
gb|CB651464.1|CB651464 OSJNEb16G22.r OSJNEb Oryza sativa (j... 54 9e-005
gb|CB652818.1|CB652818 OSJNEc03D15.f OSJNEc Oryza sativa (j... 54 9e-005
gb|CB652819.1|CB652819 OSJNEc03D15.r OSJNEc Oryza sativa (j... 54 9e-005
gb|CB663876.1|CB663876 OSJNEd09E18.r OSJNEd Oryza sativa (j... 54 9e-005
dbj|AP002969.2| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
dbj|AK058723.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK059075.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK070557.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK101007.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK102239.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK105737.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNB... 54 9e-005
dbj|AP002818.2| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|AACV01000006.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01002766.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01021758.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
ref|NM_190807.1| Oryza sativa (japonica cultivar-group), p... 54 9e-005
ref|NM_196951.1| Oryza sativa (japonica cultivar-group) put... 54 9e-005
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 54 9e-005
ref|XM_462726.2| Oryza sativa (japonica cultivar-group), mRNA 54 9e-005
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|AZ047307.1|AZ047307 nbeb0093C23r CUGI Rice BAC Library (... 52 4e-004
gb|AU055921.1|AU055921 AU055921 Oryza sativa mature leaf Ni... 52 4e-004
gb|CB653491.1|CB653491 OSJNEc04J05.r OSJNEc Oryza sativa (j... 52 4e-004
gb|CB679458.1|CB679458 OSJNEf02P16.r OSJNEf Oryza sativa (j... 52 4e-004
dbj|AK099405.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK101055.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
gb|AACV01020832.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01021761.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
ref|NM_194851.1| Oryza sativa (japonica cultivar-group) put... 52 4e-004
ref|NM_196955.1| Oryza sativa (japonica cultivar-group) put... 52 4e-004
gb|CB645969.1|CB645969 OSJNEb08B08.r OSJNEb Oryza sativa (j... 50 0.001
gb|CB677019.1|CB677019 OSJNEe13J16.f OSJNEe Oryza sativa (j... 50 0.001
gb|CF303824.1|CF303824 ABF1--03-F03.g1 ABF3-overexpressing ... 50 0.001
gb|AY305030.1| Oryza sativa (japonica cultivar-group) nitra... 50 0.001
dbj|AK066937.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK068409.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK101480.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK105765.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK121847.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G1... 50 0.001
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 50 0.001
gb|AACV01002763.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01022085.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01022178.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|NM_190804.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|NM_197689.1| Oryza sativa (japonica cultivar-group) put... 50 0.001
ref|NM_197915.1| Oryza sativa (japonica cultivar-group) put... 50 0.001
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 50 0.001
ref|XM_462682.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_473737.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
gb|CB656714.1|CB656714 OSJNEc11F22.r OSJNEc Oryza sativa (j... 48 0.006
gb|CB670725.1|CB670725 OSJNEe03P07.r OSJNEe Oryza sativa (j... 48 0.006
gb|CB670985.1|CB670985 OSJNEe04F10.r OSJNEe Oryza sativa (j... 48 0.006
gb|CB672234.1|CB672234 OSJNEe06C18.r OSJNEe Oryza sativa (j... 48 0.006
dbj|AK061822.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK064899.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK101099.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP005809.4| Oryza sativa (japonica cultivar-group) geno... 48 0.006
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 48 0.006
dbj|AP003761.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|AACV01014891.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01016742.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
ref|XM_463492.1| Oryza sativa (japonica cultivar-group), p... 48 0.006
ref|XM_479079.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.006
dbj|AP003621.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 48 0.006
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|D48208.1|D48208 RICS14305A Rice green shoot Oryza sativa... 46 0.022
gb|D49106.1|D49106 RICS15782A Rice green shoot Oryza sativa... 46 0.022
gb|CB665828.1|CB665828 OSJNEd12H09.r OSJNEd Oryza sativa (j... 46 0.022
gb|CB675624.1|CB675624 OSJNEe11H15.r OSJNEe Oryza sativa (j... 46 0.022
gb|CB677221.1|CB677221 OSJNEe13O22.r OSJNEe Oryza sativa (j... 46 0.022
dbj|AK072119.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.022
gb|AC137930.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.022
gb|AACV01005835.1| Oryza sativa (japonica cultivar-group) c... 46 0.022
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 46 0.022
gb|AC118132.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.022
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.022
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.022
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 46 0.022
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.022
gb|AQ840663.1|AQ840663 nbxb0068O04r CUGI Rice BAC Library O... 44 0.086
gb|CB643536.1|CB643536 OSJNEb04E09.r OSJNEb Oryza sativa (j... 44 0.086
gb|CB656321.1|CB656321 OSJNEc10I17.r OSJNEc Oryza sativa (j... 44 0.086
dbj|AK065840.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.086
dbj|AK068274.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.086
dbj|AK111143.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.086
dbj|AP004096.3| Oryza sativa (japonica cultivar-group) geno... 44 0.086
gb|AC130729.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.086
dbj|AP004750.2| Oryza sativa (japonica cultivar-group) geno... 44 0.086
gb|AACV01005194.1| Oryza sativa (japonica cultivar-group) c... 44 0.086
gb|AACV01009925.1| Oryza sativa (japonica cultivar-group) c... 44 0.086
gb|AACV01012157.1| Oryza sativa (japonica cultivar-group) c... 44 0.086
gb|AACV01012233.1| Oryza sativa (japonica cultivar-group) c... 44 0.086
gb|AACV01013757.1| Oryza sativa (japonica cultivar-group) c... 44 0.086
ref|XM_467231.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.086
ref|XM_472779.1| Oryza sativa (japonica cultivar-group), p... 44 0.086
ref|XM_475275.1| Oryza sativa (japonica cultivar-group), p... 44 0.086
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 44 0.086
gb|AC130600.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.086
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.086
emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromoso... 44 0.086
gb|C72233.1|C72233 C72233 Rice panicle at flowering stage O... 42 0.34
dbj|AK061227.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.34
dbj|AK070077.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.34
dbj|AK070558.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.34
dbj|AK119621.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.34
dbj|AK120196.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.34
emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC O... 42 0.34
ref|NT_107146.1| Oryza sativa (japonica cultivar-group) 42 0.34
gb|AACV01017296.1| Oryza sativa (japonica cultivar-group) c... 42 0.34
gb|AACV01024300.1| Oryza sativa (japonica cultivar-group) c... 42 0.34
ref|XM_480163.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.34
dbj|AP003905.3| Oryza sativa (japonica cultivar-group) geno... 42 0.34
gb|CH401273.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.34
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
>gb|CB651417.1|CB651417 OSJNEb16F21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16F21 3', mRNA sequence
Length = 773
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Minus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 654 tgcgcgccatcgctcgccacgggctttacggcgacaaggacgtcgtgcccatctccatct 595
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 594 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 535
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 534 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 475
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 474 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 415
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 414 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 355
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 354 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 295
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 294 tcatcgccagctggtacacctacaagaagacggc 261
>dbj|AK058745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H02, full
insert sequence
Length = 1984
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 1410 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 1469
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 1470 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 1529
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 1530 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 1589
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 1590 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 1649
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 1650 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 1709
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 1710 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 1769
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 1770 tcatcgccagctggtacacctacaagaagacggc 1803
>dbj|AK070036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E09, full
insert sequence
Length = 2307
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 1512 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 1571
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 1572 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 1631
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 1632 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 1691
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 1692 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 1751
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 1752 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 1811
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 1812 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 1871
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 1872 tcatcgccagctggtacacctacaagaagacggc 1905
>dbj|AK102216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L04, full
insert sequence
Length = 3090
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 2529 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 2588
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 2589 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 2648
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 2649 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 2708
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 2709 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 2768
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 2769 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 2828
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 2829 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 2888
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 2889 tcatcgccagctggtacacctacaagaagacggc 2922
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0019D06
Length = 167405
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 80118 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 80177
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 80178 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 80237
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 80238 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 80297
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 80298 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 80357
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 80358 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 80417
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 80418 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 80477
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 80478 tcatcgccagctggtacacctacaagaagacggc 80511
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0024G09
Length = 175565
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 25584 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 25643
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 25644 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 25703
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 25704 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 25763
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 25764 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 25823
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 25824 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 25883
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 25884 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 25943
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 25944 tcatcgccagctggtacacctacaagaagacggc 25977
>gb|AACV01000167.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000167, whole
genome shotgun sequence
Length = 65020
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 64106 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 64165
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 64166 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 64225
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 64226 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 64285
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 64286 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 64345
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 64346 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 64405
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 64406 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 64465
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 64466 tcatcgccagctggtacacctacaagaagacggc 64499
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 2294336 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 2294395
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 2294396 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 2294455
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 2294456 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 2294515
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 2294516 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 2294575
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 2294576 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 2294635
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 2294636 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 2294695
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 2294696 tcatcgccagctggtacacctacaagaagacggc 2294729
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 39384094 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 39384153
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 39384154 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 39384213
Query: 385 agaagac 391
|||||||
Sbjct: 39384214 agaagac 39384220
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 39389485 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 39389544
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 39389545 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 39389604
Query: 386 gaagac 391
||||||
Sbjct: 39389605 gaagac 39389610
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 31432530 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 31432589
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 31432590 cctcttctgggccagctggtacaagtacaag 31432620
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 39383926 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 39383985
Query: 157 tg 158
||
Sbjct: 39383986 tg 39383987
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 39389345 gggcagatggagttcttctacgaccaggcccccgacgccatg 39389386
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 37871259 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 37871304
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 37866554 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 37866599
Score = 60.0 bits (30), Expect = 1e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 289 accgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttcc 348
||||| ||| |||||||||||||| |||||| |||||||| |||||| | |||||| ||
Sbjct: 21115485 accgcagccgcctcgactacttctactggctcctcgccgtcctcagcgtcctcaacctcg 21115544
Query: 349 ttgcctacctcgtc 362
||||||||||||
Sbjct: 21115545 ccgcctacctcgtc 21115558
Score = 56.0 bits (28), Expect = 2e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||||||||||||
Sbjct: 37885783 gagttcttctacgaccaggcgcccgacg 37885810
Score = 54.0 bits (27), Expect = 9e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 atcgcgcggcacggcctgtacggcgaggacg 39
|||||||||||||||||||||||||| ||||
Sbjct: 39383829 atcgcgcggcacggcctgtacggcgacgacg 39383859
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccgtgctc 332
||||||||||||| |||||||||||||||| |||| | ||||||| ||||
Sbjct: 37890423 aacctcaaccgcgcgcacctcgactacttctactggatcctcgccgcgctc 37890473
Score = 54.0 bits (27), Expect = 9e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 301 tcgactacttcttctggctgctcgccgtgctcagc 335
|||||||||||| |||||| |||||||||||||||
Sbjct: 177149 tcgactacttctactggctcctcgccgtgctcagc 177183
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||| |||||||||||||||| |||||| |||||||
Sbjct: 37900580 tcaaccgcgcgcacctcgactacttctactggctcctcgccg 37900621
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 37900419 ggagttcttctacgaccaggtgcccgacg 37900447
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 37876456 ggagttcttctacgaccaggtgcccgacg 37876484
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctgg 317
||||||||| ||||||||||||||||| ||||
Sbjct: 37907035 tcaaccgcgcccacctcgactacttctactgg 37907066
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctgg 317
||||||||||||| |||||||||||||||| ||||
Sbjct: 37906164 aacctcaaccgcgcgcacctcgactacttctactgg 37906199
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||| ||||||||
Sbjct: 37890270 gagttcttctacgaccaggtgcccgacg 37890297
Score = 46.1 bits (23), Expect = 0.022
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgcc 155
|||||||||||||||||||| |||||||||
Sbjct: 37871102 ggagttcttctacgaccaggtccccgacgcc 37871132
Score = 44.1 bits (22), Expect = 0.086
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccg 150
|||||||||||||||||||| |||||
Sbjct: 37906010 ggagttcttctacgaccaggtgcccg 37906035
Score = 44.1 bits (22), Expect = 0.086
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgc 154
|||||||||||||||||||| ||||||||
Sbjct: 37866400 ggagttcttctacgaccaggtccccgacgc 37866429
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 2294336 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 2294395
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 2294396 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 2294455
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 2294456 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 2294515
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 2294516 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 2294575
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 2294576 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 2294635
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 2294636 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 2294695
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 2294696 tcatcgccagctggtacacctacaagaagacggc 2294729
Score = 54.0 bits (27), Expect = 9e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 301 tcgactacttcttctggctgctcgccgtgctcagc 335
|||||||||||| |||||| |||||||||||||||
Sbjct: 177149 tcgactacttctactggctcctcgccgtgctcagc 177183
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 2343750 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 2343809
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 2343810 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 2343869
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 2343870 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 2343929
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 2343930 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 2343989
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 2343990 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 2344049
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 2344050 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 2344109
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 2344110 tcatcgccagctggtacacctacaagaagacggc 2344143
Score = 54.0 bits (27), Expect = 9e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 301 tcgactacttcttctggctgctcgccgtgctcagc 335
|||||||||||| |||||| |||||||||||||||
Sbjct: 158858 tcgactacttctactggctcctcgccgtgctcagc 158892
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 2343750 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 2343809
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 2343810 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 2343869
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 2343870 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 2343929
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 2343930 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 2343989
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 2343990 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 2344049
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 2344050 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 2344109
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 2344110 tcatcgccagctggtacacctacaagaagacggc 2344143
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 38743059 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 38743118
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 38743119 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 38743178
Query: 385 agaagac 391
|||||||
Sbjct: 38743179 agaagac 38743185
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 38769555 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 38769614
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 38769615 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 38769674
Query: 386 gaagac 391
||||||
Sbjct: 38769675 gaagac 38769680
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 30986036 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 30986095
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 30986096 cctcttctgggccagctggtacaagtacaag 30986126
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 38742891 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 38742950
Query: 157 tg 158
||
Sbjct: 38742951 tg 38742952
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct: 38741436 cggaggtgttcacgttcatcgggcaaatggagttcttctacgaccaggcgcccgacgcca 38741495
Query: 157 tg 158
||
Sbjct: 38741496 tg 38741497
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 38769415 gggcagatggagttcttctacgaccaggcccccgacgccatg 38769456
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 37247752 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 37247797
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 37243046 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 37243091
Score = 60.0 bits (30), Expect = 1e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 289 accgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttcc 348
||||| ||| |||||||||||||| |||||| |||||||| |||||| | |||||| ||
Sbjct: 20610940 accgcagccgcctcgactacttctactggctcctcgccgtcctcagcgtcctcaacctcg 20610999
Query: 349 ttgcctacctcgtc 362
||||||||||||
Sbjct: 20611000 ccgcctacctcgtc 20611013
Score = 56.0 bits (28), Expect = 2e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||||||||||||
Sbjct: 37260733 gagttcttctacgaccaggcgcccgacg 37260760
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccgtgctc 332
||||||||||||| |||||||||||||||| |||| | ||||||| ||||
Sbjct: 37265546 aacctcaaccgcgcgcacctcgactacttctactggatcctcgccgcgctc 37265596
Score = 54.0 bits (27), Expect = 9e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 301 tcgactacttcttctggctgctcgccgtgctcagc 335
|||||||||||| |||||| |||||||||||||||
Sbjct: 158858 tcgactacttctactggctcctcgccgtgctcagc 158892
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||| |||||||||||||||| |||||| |||||||
Sbjct: 37275703 tcaaccgcgcgcacctcgactacttctactggctcctcgccg 37275744
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 37275542 ggagttcttctacgaccaggtgcccgacg 37275570
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 37252499 ggagttcttctacgaccaggtgcccgacg 37252527
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctgg 317
||||||||| ||||||||||||||||| ||||
Sbjct: 37282162 tcaaccgcgcccacctcgactacttctactgg 37282193
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctgg 317
||||||||||||| |||||||||||||||| ||||
Sbjct: 37281291 aacctcaaccgcgcgcacctcgactacttctactgg 37281326
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||| ||||||||
Sbjct: 37265393 gagttcttctacgaccaggtgcccgacg 37265420
Score = 46.1 bits (23), Expect = 0.022
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgcc 155
|||||||||||||||||||| |||||||||
Sbjct: 37247595 ggagttcttctacgaccaggtccccgacgcc 37247625
Score = 44.1 bits (22), Expect = 0.086
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccg 150
|||||||||||||||||||| |||||
Sbjct: 37281137 ggagttcttctacgaccaggtgcccg 37281162
Score = 44.1 bits (22), Expect = 0.086
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgc 154
|||||||||||||||||||| ||||||||
Sbjct: 37242892 ggagttcttctacgaccaggtccccgacgc 37242921
>ref|NM_184319.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1984
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 1410 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 1469
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 1470 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 1529
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 1530 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 1589
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 1590 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 1649
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 1650 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 1709
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 1710 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 1769
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 1770 tcatcgccagctggtacacctacaagaagacggc 1803
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 448 bits (226), Expect = e-123
Identities = 352/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 2296534 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 2296593
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 2296594 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 2296653
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 2296654 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 2296713
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 2296714 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 2296773
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 2296774 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 2296833
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 2296834 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 2296893
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 2296894 tcatcgccagctggtacacctacaagaagacggc 2296927
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 39303424 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 39303483
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 39303484 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 39303543
Query: 385 agaagac 391
|||||||
Sbjct: 39303544 agaagac 39303550
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 39308815 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 39308874
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 39308875 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 39308934
Query: 386 gaagac 391
||||||
Sbjct: 39308935 gaagac 39308940
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 31351860 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 31351919
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 31351920 cctcttctgggccagctggtacaagtacaag 31351950
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 39303256 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 39303315
Query: 157 tg 158
||
Sbjct: 39303316 tg 39303317
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 39308675 gggcagatggagttcttctacgaccaggcccccgacgccatg 39308716
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 37790589 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 37790634
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 37785884 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 37785929
Score = 60.0 bits (30), Expect = 1e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 289 accgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttcc 348
||||| ||| |||||||||||||| |||||| |||||||| |||||| | |||||| ||
Sbjct: 21036768 accgcagccgcctcgactacttctactggctcctcgccgtcctcagcgtcctcaacctcg 21036827
Query: 349 ttgcctacctcgtc 362
||||||||||||
Sbjct: 21036828 ccgcctacctcgtc 21036841
Score = 56.0 bits (28), Expect = 2e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||||||||||||
Sbjct: 37805113 gagttcttctacgaccaggcgcccgacg 37805140
Score = 54.0 bits (27), Expect = 9e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 atcgcgcggcacggcctgtacggcgaggacg 39
|||||||||||||||||||||||||| ||||
Sbjct: 39303159 atcgcgcggcacggcctgtacggcgacgacg 39303189
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccgtgctc 332
||||||||||||| |||||||||||||||| |||| | ||||||| ||||
Sbjct: 37809753 aacctcaaccgcgcgcacctcgactacttctactggatcctcgccgcgctc 37809803
Score = 54.0 bits (27), Expect = 9e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 301 tcgactacttcttctggctgctcgccgtgctcagc 335
|||||||||||| |||||| |||||||||||||||
Sbjct: 179347 tcgactacttctactggctcctcgccgtgctcagc 179381
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||| |||||||||||||||| |||||| |||||||
Sbjct: 37819910 tcaaccgcgcgcacctcgactacttctactggctcctcgccg 37819951
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 37819749 ggagttcttctacgaccaggtgcccgacg 37819777
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 37795786 ggagttcttctacgaccaggtgcccgacg 37795814
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctgg 317
||||||||| ||||||||||||||||| ||||
Sbjct: 37826365 tcaaccgcgcccacctcgactacttctactgg 37826396
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctgg 317
||||||||||||| |||||||||||||||| ||||
Sbjct: 37825494 aacctcaaccgcgcgcacctcgactacttctactgg 37825529
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||| ||||||||
Sbjct: 37809600 gagttcttctacgaccaggtgcccgacg 37809627
Score = 46.1 bits (23), Expect = 0.022
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgcc 155
|||||||||||||||||||| |||||||||
Sbjct: 37790432 ggagttcttctacgaccaggtccccgacgcc 37790462
Score = 44.1 bits (22), Expect = 0.086
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccg 150
|||||||||||||||||||| |||||
Sbjct: 37825340 ggagttcttctacgaccaggtgcccg 37825365
Score = 44.1 bits (22), Expect = 0.086
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgc 154
|||||||||||||||||||| ||||||||
Sbjct: 37785730 ggagttcttctacgaccaggtccccgacgc 37785759
>gb|CB657918.1|CB657918 OSJNEc13J12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13J12 3', mRNA sequence
Length = 810
Score = 440 bits (222), Expect = e-121
Identities = 351/394 (89%)
Strand = Plus / Minus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 688 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 629
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 628 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 569
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||| ||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 568 agctggagttcttttacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 509
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 508 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 449
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 448 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 389
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 388 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 329
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 328 tcatcgccagctggtacacctacaagaagacggc 295
>dbj|AK105664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H07, full
insert sequence
Length = 2189
Score = 440 bits (222), Expect = e-121
Identities = 351/394 (89%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 1511 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 1570
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 1571 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 1630
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 1631 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 1690
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 1691 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 1750
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 1751 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 1810
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 1811 tcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 1870
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||| ||||||||||| ||||||||||||||
Sbjct: 1871 tcatcgtcagctggtacacctacaagaagacggc 1904
>gb|AU102191.1|AU102191 AU102191 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2393, mRNA sequence
Length = 681
Score = 438 bits (221), Expect = e-120
Identities = 352/395 (89%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 53 tgcgcgccatcgctcgccacgggctctacggcganaaggacgtcgtgcccatctccatct 112
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 113 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 172
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctc-cgcgctg 179
||||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||
Sbjct: 173 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcgngcgctg 232
Query: 180 tcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcacc 239
|||||||||||||||||||| |||||||||||||||||| | || ||||||||||| |||
Sbjct: 233 tcgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttacc 292
Query: 240 cacatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccac 299
|| |||||||| || ||||| | |||||||||||||||| ||||||||||||||||||
Sbjct: 293 catgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccac 352
Query: 300 ctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctc 359
|||||||||||||||||||||||||||||||||||||| |||||||| | |||||||
Sbjct: 353 ctcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctc 412
Query: 360 gtcatcgccagctggtacaagtacaagaagacggc 394
||||||||||||||||||| ||||||||||||||
Sbjct: 413 gtcatcgccagctggtacacctacaagaagacggc 447
>gb|CB660500.1|CB660500 OSJNEd02F13.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02F13 3', mRNA sequence
Length = 800
Score = 432 bits (218), Expect = e-119
Identities = 350/394 (88%)
Strand = Plus / Minus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 679 tgcgcgccatcgctcgccacgggctttacggcgacaaggacgtcgtgcccatctccatct 620
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 619 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 560
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||| ||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 559 agctggagttcttttacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 500
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 499 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 440
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 439 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 380
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
|||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||
Sbjct: 379 tcgactactttttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacctcg 320
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 319 tcatcgccagctggtacacctacaagaagacggc 286
>gb|CB669400.1|CB669400 OSJNEe01N14.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01N14 3', mRNA sequence
Length = 727
Score = 416 bits (210), Expect = e-114
Identities = 348/394 (88%)
Strand = Plus / Minus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 562 tgcgcgccatcgctcgccacgggctttacggcgacaaggacgtcgtgcccatctccatct 503
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 502 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 443
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||| ||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 442 agctggagttcttttacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 383
Query: 181 cgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtcaccc 240
||||||||||||||||||| |||||||||||||||||| | || ||||||||||| ||||
Sbjct: 382 cgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgttaccc 323
Query: 241 acatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggccacc 300
| |||||||| || ||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 322 atgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggccacc 263
Query: 301 tcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacctcg 360
|||||||||| || ||||||||||||||||||||||| |||||||| | |||||||
Sbjct: 262 tcgactactttttttggctgctcgccgtgctcagcctcatcaacttcggcgtttacctcg 203
Query: 361 tcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||| ||||||||||||||
Sbjct: 202 tcatcgccagctggtacacctacaagaagacggc 169
>dbj|AG213652.1| Oryza sativa (japonica cultivar-group) DNA, clone:T10295T, 3'
flanking sequence of Tos17 insertion in rice strain
ND6002, genomic survey sequence
Length = 469
Score = 385 bits (194), Expect = e-104
Identities = 287/318 (90%)
Strand = Plus / Minus
Query: 77 gtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggcagctggagttcttcta 136
||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 440 gtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggcagctggagttcttcta 381
Query: 137 cgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgtcgctcaccaccgtcgc 196
||||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 380 cgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgtcgctcaccaccgtcgc 321
Query: 197 gctcggcaactacctcagcacggtcctggtgaccatcgtcacccacatcaccaccaggca 256
||| |||||||||||||||||| | || ||||||||||| ||||| |||||||| || |
Sbjct: 320 gctaggcaactacctcagcacgctgctcgtgaccatcgttacccatgtcaccacccggaa 261
Query: 257 cggccgcatcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctg 316
|||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 260 cggcgccgtcgggtggatcccggacaacctcaaccgcggccacctcgactacttcttctg 201
Query: 317 gctgctcgccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggta 376
||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 200 gctgctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgccagctggta 141
Query: 377 caagtacaagaagacggc 394
|| ||||||||||||||
Sbjct: 140 cacctacaagaagacggc 123
>gb|AU092492.1|AU092492 AU092492 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51433, mRNA sequence
Length = 683
Score = 377 bits (190), Expect = e-102
Identities = 350/398 (87%), Gaps = 5/398 (1%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgccc-atctccatc 59
||||||||||||| | ||||| || |||||||| | ||| |||||||| |||||||||
Sbjct: 91 tgcgcgccatcgctngccacgggctntacggcgacaaggacgtcgtgccccatctccatc 150
Query: 60 tgctggcagataccgcagtacttcat-catcgggtgcgcggaggtgttcaccttcgtggg 118
| ||| ||| | |||||||||||||| |||||| ||| ||||||||||| ||||| ||
Sbjct: 151 ttctgncaggtgccgcagtacttcattcatcggcgccgccgaggtgttcacgttcgtcgg 210
Query: 119 gcagctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgc- 177
||||||||||||||||||||||||||| |||||||||||| | ||||||||||| | ||
Sbjct: 211 gcagctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctc-gngcg 269
Query: 178 tgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtca 237
|||||||||||||||||||||| |||||||||||||||||| | || ||||||||||| |
Sbjct: 270 tgtcgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgtta 329
Query: 238 cccacatcaccaccaggcacggc-cgcatcgggtggatcccggagaacctcaaccgcggc 296
|||| |||||||| || ||||| | | |||||||||||||||| |||||||||||||||
Sbjct: 330 cccatgtcaccacccggaacggcgcccgtcgggtggatcccggacaacctcaaccgcggc 389
Query: 297 cacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctac 356
||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct: 390 cacctcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctac 449
Query: 357 ctcgtcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||||||| ||||||||||||||
Sbjct: 450 ctcgtcatcgccagctggtacacctacaagaagacggc 487
>gb|CB665182.1|CB665182 OSJNEd11G01.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11G01 3', mRNA sequence
Length = 847
Score = 353 bits (178), Expect = 7e-095
Identities = 253/278 (91%)
Strand = Plus / Minus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcg 176
||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||
Sbjct: 625 gggcagctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcg 566
Query: 177 ctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtc 236
||||||||||||||||||||||| |||||||||||||||||| | || |||||||||||
Sbjct: 565 ctgtcgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgtt 506
Query: 237 acccacatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggc 296
||||| |||||||| || ||||| | |||||||||||||||| |||||||||||||||
Sbjct: 505 acccatgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggc 446
Query: 297 cacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctac 356
||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct: 445 cacctcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctac 386
Query: 357 ctcgtcatcgccagctggtacaagtacaagaagacggc 394
|||||||||||||||||||||| ||||||||||||||
Sbjct: 385 ctcgtcatcgccagctggtacacctacaagaagacggc 348
>gb|C98524.1|C98524 C98524 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0368_6Z, mRNA sequence
Length = 547
Score = 345 bits (174), Expect = 2e-092
Identities = 278/314 (88%)
Strand = Plus / Plus
Query: 81 ttcatcatcgggtgcgcggaggtgttcaccttcgtggggcagctggagttcttctacgac 140
||||||||||| ||| ||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 3 ttcatcatcggcgccgccgaggtnttcacgttcgtcgggcagctggagttcttctacgac 62
Query: 141 caggcgcccgacgccatgaggagcatgtgctccgcgctgtcgctcaccaccgtcgcgctc 200
||||| |||||||||||| | ||||||||||||| |||||||| ||||||||||||||
Sbjct: 63 caggctcccgacgccatgcgcagcatgtgctccggcctgtcgcttaccaccgtcgcgcta 122
Query: 201 ggcaactacctcagcacggtcctggtgaccatcgtcacccacatcaccaccaggcacggc 260
|||||||||| ||||||| | || ||||||||||| ||||| |||||||| || |||||
Sbjct: 123 ggcaactaccncagcacgctgctcgtgaccatcgttacccatgtcaccacccggaacggc 182
Query: 261 cgcatcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctg 320
| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 183 nccgtcgggtggatcccggacaacctnaaccgcggccacctcgactacttcttctggctg 242
Query: 321 ctcgccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaag 380
||||||||||||||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 243 ctcgccgtgctcagcctcatcaacttcggcgtctacctcgtcatcgccagctggtacacc 302
Query: 381 tacaagaagacggc 394
||||||||||||||
Sbjct: 303 tacaagaagacggc 316
>gb|AU055922.1|AU055922 AU055922 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S20154_2Z, mRNA sequence
Length = 632
Score = 343 bits (173), Expect = 7e-092
Identities = 267/296 (90%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 100 aggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatga 159
|||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 37 aggtgttcacgttcgtcgggcagctggagttcttctacgaccaggctcccgacgccatgc 96
Query: 160 ggagcatgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacgg 219
| ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 97 gcagcatgtgctcngc-ctgtcgctcaccaccgtcgcgctaggcaactacctcagcacgc 155
Query: 220 tcctggtgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccgg 279
| || ||||||||||| ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 156 tgctcgtgaccatcgttacccatgtcaccacccggaacggcgccgtcgggtggatcccgg 215
Query: 280 agaacct-caaccgcggccacctcgactacttcttctggctgctcgccgtgctcagcctt 338
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 acaaccttcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagcctc 275
Query: 339 ctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaagaagacggc 394
|||||||| | |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 276 atcaacttcggcgtctacctcgtcatcgccagctggtacacctacaagaagacggc 331
>gb|C27322.1|C27322 C27322 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51592_1A, mRNA sequence
Length = 418
Score = 307 bits (155), Expect = 4e-081
Identities = 307/354 (86%), Gaps = 4/354 (1%)
Strand = Plus / Plus
Query: 43 tcgtgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggagg 102
|||||||||||||||||| ||||||| | |||||||||||||||||||| ||| |||
Sbjct: 22 tcgtgcccatctccatcttctggcaggtgccgcagtacttcatcatcggcgccgcc-agg 80
Query: 103 tgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgagga 162
||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| | |
Sbjct: 81 tgttcacgttcgtcgggcagctggagttcttctacgaccaggctcccgacgccatgcgca 140
Query: 163 gcatgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcc 222
|| || |||||||||||||||||||||||||| |||||||||||||||||| | |
Sbjct: 141 nattgncttcggcgctgtcgctcaccaccgtcgcgctaggcaactacctcagcacgctgc 200
Query: 223 tggtgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggaga 282
| ||||||||||| ||||| |||||||| || ||||| | |||||||||||||||| |
Sbjct: 201 tcgtgaccatcgttacccatgtcaccacccggaacggcgccgtcgggtggatcccggaca 260
Query: 283 acctcaaccgcggccacctcgactac-ttcttctggctgctcgccgtgctcagccttctc 341
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 261 acctcaaccgnggccacctcgactactttcttctggctgctcgccgtgctcagcctcatc 320
Query: 342 aacttccttgcctacctcgtca-tcgccagc-tggtacaagtacaagaagacgg 393
|||||| | ||| ||||||| ||| || | |||||||| |||||||||||||
Sbjct: 321 aacttcggcgtctanctcgtcattcgncaacttggtacaactacaagaagacgg 374
>gb|AU029667.1|AU029667 AU029667 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31221_4Z, mRNA sequence
Length = 496
Score = 258 bits (130), Expect = 3e-066
Identities = 195/217 (89%)
Strand = Plus / Plus
Query: 178 tgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtca 237
|||||||||||||||||||||| ||| |||||||||||||| | || ||||||||||| |
Sbjct: 3 tgtcgctcaccaccgtcgcgctaggcnactacctcagcacgctgctcgtgaccatcgtta 62
Query: 238 cccacatcaccaccaggcacggccgcatcgggtggatcccggagaacctcaaccgcggcc 297
|||| |||||||| || ||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 63 cccatgtcaccacccggaacggcgccgtcgggtggatcccggacaacctcaaccgcggcc 122
Query: 298 acctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgcctacc 357
|||||||||||||||||||||||||||||||||||||||| |||||||| | |||||
Sbjct: 123 acctcgactacttcttctggctgctcgccgtgctcagcctcatcaacttcggcgtctacc 182
Query: 358 tcgtcatcgccagctggtacaagtacaagaagacggc 394
||||||||||||||||||||| ||||||||||||||
Sbjct: 183 tcgtcatcgccagctggtacacctacaagaagacggc 219
>gb|AU097146.1|AU097146 AU097146 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S2437, mRNA sequence
Length = 422
Score = 222 bits (112), Expect = 2e-055
Identities = 194/219 (88%), Gaps = 2/219 (0%)
Strand = Plus / Plus
Query: 178 tgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctggtgaccatcgtca 237
|||||||||||||||||||||| |||||||||||||||||| | || ||||||||||| |
Sbjct: 3 tgtcgctcaccaccgtcgcgctaggcaactacctcagcacgctgctcgtgaccatcgtta 62
Query: 238 cccacatc-accaccaggcacggccgca-tcgggtggatcccggagaacctcaaccgcgg 295
|||| || |||||| || ||||| || |||||||||||||||| ||||||||||||||
Sbjct: 63 cccatgtcnaccacccggaacggcgccagtcgggtggatcccggacaacctcaaccgcgg 122
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||||||||||| ||||||||||||||||||||| |||||||| | |||
Sbjct: 123 ccacctcgactacttcttnctgctgctcgccgtgctcagcctcatcaacttcggcgtcta 182
Query: 356 cctcgtcatcgccagctggtacaagtacaagaagacggc 394
||||||||||||||||||||||| ||||||||||||||
Sbjct: 183 cctcgtcatcgccagctggtacacctacaagaagacggc 221
>dbj|AK100112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006A18, full
insert sequence
Length = 1875
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 1377 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 1433
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 1434 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 1493
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 1494 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 1553
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 1554 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 1613
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 1614 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 1673
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 1674 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 1715
>dbj|AK106932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C04, full
insert sequence
Length = 1823
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 1374 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 1430
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 1431 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 1490
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 1491 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 1550
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 1551 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 1610
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 1611 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 1670
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 1671 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 1712
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:B1026C12
Length = 170240
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 42331 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 42387
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 42388 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 42447
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 42448 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 42507
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 42508 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 42567
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 42568 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 42627
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 42628 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 42669
>gb|AACV01014989.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg014989, whole
genome shotgun sequence
Length = 17870
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 8655 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 8711
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 8712 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 8771
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 8772 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 8831
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 8832 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 8891
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 8892 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 8951
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 8952 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 8993
>ref|XM_476341.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1823
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 1374 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 1430
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 1431 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 1490
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 1491 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 1550
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 1551 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 1610
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 1611 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 1670
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 1671 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 1712
>ref|XM_506127.1| PREDICTED Oryza sativa (japonica cultivar-group), B1026C12.10 mRNA
Length = 1875
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 1377 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 1433
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 1434 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 1493
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 1494 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 1553
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 1554 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 1613
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 1614 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 1673
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 1674 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 1715
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 42329 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 42385
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 42386 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 42445
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 42446 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 42505
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 42506 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 42565
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 42566 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 42625
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 42626 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 42667
>gb|CH401218.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000055
genomic scaffold, whole genome shotgun sequence
Length = 1431804
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 34268 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 34324
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 34325 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 34384
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 34385 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 34444
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 34445 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 34504
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 34505 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 34564
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 34565 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 34606
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome
shotgun sequence
Length = 28626509
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 34268 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 34324
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 34325 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 34384
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 34385 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 34444
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 34445 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 34504
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 34505 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 34564
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 34565 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 34606
Score = 48.1 bits (24), Expect = 0.006
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 120 cagctggagttcttctacgaccaggcgcccgacgccatgaggagcatg 167
||||||||||||||| ||| |||||||| ||| |||||| |||||||
Sbjct: 23562774 cagctggagttcttccacggtcaggcgccggactccatgaagagcatg 23562821
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
complete sequence
Length = 29644043
Score = 222 bits (112), Expect = 2e-055
Identities = 285/342 (83%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 46 tgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtgt 105
||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||
Sbjct: 43032 tgcccatctccatcttctggcaggt---gcagtacttcatcatcggcgccgctgaggtgt 43088
Query: 106 tcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagca 165
|| ||||| | || ||| | || ||||||||||||||||||||||||| |||| | ||||
Sbjct: 43089 tcgccttcatcggccagatcgacttcttctacgaccaggcgcccgacgacatgcgcagca 43148
Query: 166 tgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctgg 225
|||| ||||||| ||||||||| || ||||||||||||||||||||||||| | || |
Sbjct: 43149 cgtgcaccgcgctctcgctcacctcctccgcgctcggcaactacctcagcacgctgctcg 43208
Query: 226 tgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaacc 285
| |||||||||| | |||||||| |||| || |||| |||||||| || ||||
Sbjct: 43209 tcgtcatcgtcaccgccgcatccaccaggggcggcggcctcggatggatccccgacaacc 43268
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaact 345
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 43269 tcaaccgcggccacctcgactacttcttctggctgctcgccgcgctcagtgctgtcaact 43328
Query: 346 tccttgcctacctcgtcatcgccagctggtacaagtacaaga 387
|||| | ||||||| ||||||| |||||||| || |||||
Sbjct: 43329 tcctcgtctacctctggatcgccaactggtacaggtgcaaga 43370
Score = 48.1 bits (24), Expect = 0.006
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 120 cagctggagttcttctacgaccaggcgcccgacgccatgaggagcatg 167
||||||||||||||| ||| |||||||| ||| |||||| |||||||
Sbjct: 24669654 cagctggagttcttccacggtcaggcgccggactccatgaagagcatg 24669701
>gb|CB660499.1|CB660499 OSJNEd02F13.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02F13 5', mRNA sequence
Length = 816
Score = 194 bits (98), Expect = 4e-047
Identities = 161/182 (88%)
Strand = Plus / Plus
Query: 1 tgcgcgccatcgcgcggcacggcctgtacggcgaggacgacatcgtgcccatctccatct 60
||||||||||||| || ||||| || |||||||| | ||| ||||||||||||||||||
Sbjct: 635 tgcgcgccatcgctcgccacgggctctacggcgacaaggacgtcgtgcccatctccatct 694
Query: 61 gctggcagataccgcagtacttcatcatcgggtgcgcggaggtgttcaccttcgtggggc 120
||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 695 tctggcaggtgccgcagtacttcatcatcggcgccgccgaggtgttcacgttcgtcgggc 754
Query: 121 agctggagttcttctacgaccaggcgcccgacgccatgaggagcatgtgctccgcgctgt 180
||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||
Sbjct: 755 agctggagttcttctacgaccaggctcccgacgccatgcgcagcatgtgctcggcgctgt 814
Query: 181 cg 182
||
Sbjct: 815 cg 816
>gb|CB653007.1|CB653007 OSJNEc03J23.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc03J23 3', mRNA sequence
Length = 733
Score = 184 bits (93), Expect = 4e-044
Identities = 285/349 (81%)
Strand = Plus / Minus
Query: 45 gtgcccatctccatctgctggcagataccgcagtacttcatcatcgggtgcgcggaggtg 104
|||||||| ||||| | |||||| | ||||||||||||||||| || | | ||||||
Sbjct: 582 gtgcccatttccattttttggcaggtgccgcagtacttcatcattggcgcccccgaggtg 523
Query: 105 ttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgccatgaggagc 164
||||| || || |||||||||||||| || | |||||||| |||||||||||| | |||
Sbjct: 522 ttcacgtttgtcgggcagctggagtttttttttgaccaggctcccgacgccatgcgcagc 463
Query: 165 atgtgctccgcgctgtcgctcaccaccgtcgcgctcggcaactacctcagcacggtcctg 224
||||| | | |||||||||| || |||||||| | ||||| ||||||||| || | |
Sbjct: 462 atgtgtttggggctgtcgctcccccccgtcgcgttaggcaattacctcagcccgctgttt 403
Query: 225 gtgaccatcgtcacccacatcaccaccaggcacggccgcatcgggtggatcccggagaac 284
|||||||| || ||||| || || || || ||||| | |||||||||||||||| |||
Sbjct: 402 gtgaccattgttacccatgtccccccccggaacggcgccgtcgggtggatcccggacaac 343
Query: 285 ctcaaccgcggccacctcgactacttcttctggctgctcgccgtgctcagccttctcaac 344
||||||||||||| |||||||||||| || ||| ||||||||||||||||||| |||||
Sbjct: 342 ctcaaccgcggccccctcgactactttttttgggtgctcgccgtgctcagcctcatcaac 283
Query: 345 ttccttgcctacctcgtcatcgccagctggtacaagtacaagaagacgg 393
|| | ||||| |||||||||||||||||| |||||||||||||
Sbjct: 282 tttggggtttaccttgtcatcgccagctggtacccctacaagaagacgg 234
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1065G12
Length = 165006
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 105130 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 105189
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 105190 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 105249
Query: 385 agaagac 391
|||||||
Sbjct: 105250 agaagac 105256
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 110521 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 110580
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 110581 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 110640
Query: 386 gaagac 391
||||||
Sbjct: 110641 gaagac 110646
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 104962 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 105021
Query: 157 tg 158
||
Sbjct: 105022 tg 105023
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 110381 gggcagatggagttcttctacgaccaggcccccgacgccatg 110422
Score = 54.0 bits (27), Expect = 9e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 atcgcgcggcacggcctgtacggcgaggacg 39
|||||||||||||||||||||||||| ||||
Sbjct: 104865 atcgcgcggcacggcctgtacggcgacgacg 104895
>gb|AACV01002870.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002870,
whole genome shotgun sequence
Length = 2278
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Minus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 803 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 744
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 743 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 684
Query: 385 agaagac 391
|||||||
Sbjct: 683 agaagac 677
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 971 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 912
Query: 157 tg 158
||
Sbjct: 911 tg 910
>ref|NM_190326.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1674
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 1538 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 1597
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 1598 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 1657
Query: 385 agaagac 391
|||||||
Sbjct: 1658 agaagac 1664
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 1370 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 1429
Query: 157 tg 158
||
Sbjct: 1430 tg 1431
Score = 54.0 bits (27), Expect = 9e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 atcgcgcggcacggcctgtacggcgaggacg 39
|||||||||||||||||||||||||| ||||
Sbjct: 1273 atcgcgcggcacggcctgtacggcgacgacg 1303
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 13831477 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 13831536
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 13831537 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 13831596
Query: 385 agaagac 391
|||||||
Sbjct: 13831597 agaagac 13831603
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 13836868 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 13836927
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 13836928 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 13836987
Query: 386 gaagac 391
||||||
Sbjct: 13836988 gaagac 13836993
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 5879913 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 5879972
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 5879973 cctcttctgggccagctggtacaagtacaag 5880003
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 13831309 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 13831368
Query: 157 tg 158
||
Sbjct: 13831369 tg 13831370
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 13836728 gggcagatggagttcttctacgaccaggcccccgacgccatg 13836769
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 12318642 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 12318687
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 12313937 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 12313982
Score = 56.0 bits (28), Expect = 2e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||||||||||||
Sbjct: 12333166 gagttcttctacgaccaggcgcccgacg 12333193
Score = 54.0 bits (27), Expect = 9e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 atcgcgcggcacggcctgtacggcgaggacg 39
|||||||||||||||||||||||||| ||||
Sbjct: 13831212 atcgcgcggcacggcctgtacggcgacgacg 13831242
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccgtgctc 332
||||||||||||| |||||||||||||||| |||| | ||||||| ||||
Sbjct: 12337806 aacctcaaccgcgcgcacctcgactacttctactggatcctcgccgcgctc 12337856
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||| |||||||||||||||| |||||| |||||||
Sbjct: 12347963 tcaaccgcgcgcacctcgactacttctactggctcctcgccg 12348004
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 12347802 ggagttcttctacgaccaggtgcccgacg 12347830
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 12323839 ggagttcttctacgaccaggtgcccgacg 12323867
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctgg 317
||||||||| ||||||||||||||||| ||||
Sbjct: 12354418 tcaaccgcgcccacctcgactacttctactgg 12354449
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctgg 317
||||||||||||| |||||||||||||||| ||||
Sbjct: 12353547 aacctcaaccgcgcgcacctcgactacttctactgg 12353582
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||| ||||||||
Sbjct: 12337653 gagttcttctacgaccaggtgcccgacg 12337680
Score = 46.1 bits (23), Expect = 0.022
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgcc 155
|||||||||||||||||||| |||||||||
Sbjct: 12318485 ggagttcttctacgaccaggtccccgacgcc 12318515
Score = 44.1 bits (22), Expect = 0.086
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccg 150
|||||||||||||||||||| |||||
Sbjct: 12353393 ggagttcttctacgaccaggtgcccg 12353418
Score = 44.1 bits (22), Expect = 0.086
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgc 154
|||||||||||||||||||| ||||||||
Sbjct: 12313783 ggagttcttctacgaccaggtccccgacgc 12313812
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0551C06
Length = 149829
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 84670 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 84729
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 84730 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 84789
Query: 385 agaagac 391
|||||||
Sbjct: 84790 agaagac 84796
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 90061 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 90120
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 90121 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 90180
Query: 386 gaagac 391
||||||
Sbjct: 90181 gaagac 90186
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 84502 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 84561
Query: 157 tg 158
||
Sbjct: 84562 tg 84563
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 89921 gggcagatggagttcttctacgaccaggcccccgacgccatg 89962
Score = 54.0 bits (27), Expect = 9e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 atcgcgcggcacggcctgtacggcgaggacg 39
|||||||||||||||||||||||||| ||||
Sbjct: 84405 atcgcgcggcacggcctgtacggcgacgacg 84435
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 265 tcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcg 324
|||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 13541338 tcgggtggatcccggacaacatcaaccgcggccacctggatgacttcttctggctgctcg 13541397
Query: 325 ccgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtaca 384
|||||||| || | ||||||| ||||||||| ||||||| | ||||||| |||||
Sbjct: 13541398 ccgtgctctgcgtcgccaacttcgccgcctacctcctcatcgcacggtggtacacgtaca 13541457
Query: 385 agaagac 391
|||||||
Sbjct: 13541458 agaagac 13541464
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 13567834 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 13567893
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 13567894 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 13567953
Query: 386 gaagac 391
||||||
Sbjct: 13567954 gaagac 13567959
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 5784315 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 5784374
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 5784375 cctcttctgggccagctggtacaagtacaag 5784405
Score = 91.7 bits (46), Expect = 4e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 13541170 cggaggtgttcacgttcatcgggcagatggagttcttctacgaccaggcgcccgacgcca 13541229
Query: 157 tg 158
||
Sbjct: 13541230 tg 13541231
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 97 cggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcccgacgcca 156
||||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct: 13539715 cggaggtgttcacgttcatcgggcaaatggagttcttctacgaccaggcgcccgacgcca 13539774
Query: 157 tg 158
||
Sbjct: 13539775 tg 13539776
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 13567694 gggcagatggagttcttctacgaccaggcccccgacgccatg 13567735
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 12046031 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 12046076
Score = 67.9 bits (34), Expect = 6e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 12041325 aacctcaaccgcgcccacctcgactacttctactggctcctcgccg 12041370
Score = 56.0 bits (28), Expect = 2e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||||||||||||
Sbjct: 12059012 gagttcttctacgaccaggcgcccgacg 12059039
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctggctgctcgccgtgctc 332
||||||||||||| |||||||||||||||| |||| | ||||||| ||||
Sbjct: 12063825 aacctcaaccgcgcgcacctcgactacttctactggatcctcgccgcgctc 12063875
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctggctgctcgccg 327
||||||||| |||||||||||||||| |||||| |||||||
Sbjct: 12073982 tcaaccgcgcgcacctcgactacttctactggctcctcgccg 12074023
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 12073821 ggagttcttctacgaccaggtgcccgacg 12073849
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacg 153
|||||||||||||||||||| ||||||||
Sbjct: 12050778 ggagttcttctacgaccaggtgcccgacg 12050806
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 286 tcaaccgcggccacctcgactacttcttctgg 317
||||||||| ||||||||||||||||| ||||
Sbjct: 12080441 tcaaccgcgcccacctcgactacttctactgg 12080472
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 282 aacctcaaccgcggccacctcgactacttcttctgg 317
||||||||||||| |||||||||||||||| ||||
Sbjct: 12079570 aacctcaaccgcgcgcacctcgactacttctactgg 12079605
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 126 gagttcttctacgaccaggcgcccgacg 153
||||||||||||||||||| ||||||||
Sbjct: 12063672 gagttcttctacgaccaggtgcccgacg 12063699
Score = 46.1 bits (23), Expect = 0.022
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgcc 155
|||||||||||||||||||| |||||||||
Sbjct: 12045874 ggagttcttctacgaccaggtccccgacgcc 12045904
Score = 44.1 bits (22), Expect = 0.086
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccg 150
|||||||||||||||||||| |||||
Sbjct: 12079416 ggagttcttctacgaccaggtgcccg 12079441
Score = 44.1 bits (22), Expect = 0.086
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 125 ggagttcttctacgaccaggcgcccgacgc 154
|||||||||||||||||||| ||||||||
Sbjct: 12041171 ggagttcttctacgaccaggtccccgacgc 12041200
>gb|AACV01002875.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002875, whole
genome shotgun sequence
Length = 70015
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 4333 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 4392
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 4393 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 4452
Query: 386 gaagac 391
||||||
Sbjct: 4453 gaagac 4458
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 4193 gggcagatggagttcttctacgaccaggcccccgacgccatg 4234
>ref|NM_190327.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1638
Score = 99.6 bits (50), Expect = 2e-018
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 266 cgggtggatcccggagaacctcaaccgcggccacctcgactacttcttctggctgctcgc 325
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1503 cgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcac 1562
Query: 326 cgtgctcagccttctcaacttccttgcctacctcgtcatcgccagctggtacaagtacaa 385
|| |||| || | ||||||| ||||||||| ||||||| ||||||||| ||| ||
Sbjct: 1563 cgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataa 1622
Query: 386 gaagac 391
||||||
Sbjct: 1623 gaagac 1628
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 117 gggcagctggagttcttctacgaccaggcgcccgacgccatg 158
|||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 1363 gggcagatggagttcttctacgaccaggcccccgacgccatg 1404
>gb|AACV01002343.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002343, whole
genome shotgun sequence
Length = 12759
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 8942 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 9001
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 9002 cctcttctgggccagctggtacaagtacaag 9032
>ref|NM_191215.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1845
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 1713 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 1772
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 1773 cctcttctgggccagctggtacaagtacaag 1803
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0481E12
Length = 161563
Score = 93.7 bits (47), Expect = 1e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 296 ccacctcgactacttcttctggctgctcgccgtgctcagccttctcaacttccttgccta 355
|||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 106143 ccacctcgacctcttcttctggctgctcgccgtgctcagcttcctcaacttcctcaacta 106202
Query: 356 cctcgtcatcgccagctggtacaagtacaag 386
|||| || |||||||||||||||||||||
Sbjct: 106203 cctcttctgggccagctggtacaagtacaag 106233
>dbj|AP003942.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone OJ1116_C09,
*** SEQUENCING IN PROGRESS ***
Length = 165900
Score = 91.7 bits (46), Expect = 4e-016
Identities = 116/138 (84%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 197 gctcggcaactacctcagcacggtcctggtgac-catcgtcacccacatcaccaccaggc 255
|||||||||||||||||||||| | || | | |||||||||| ||| ||||||||
Sbjct: 41534 gctcggcaactacctcagcacgctactcatcagtcatcgtcaccgccatatccaccaggg 41593
Query: 256 acggccgcatcgggtggatcccggagaacctcaaccgcggccacctcgactacttcttct 315
| || || |||| |||||||| || ||||||||||||||||| ||||||||||||||||
Sbjct: 41594 gcagcggcctcggatggatccccgacaacctcaaccgcggccatctcgactacttcttct 41653
Query: 316 ggctgctcgccgtgctca 333
|||||||| |||| ||||
Sbjct: 41654 ggctgctcaccgttctca 41671
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 802,926
Number of Sequences: 438736
Number of extensions: 802926
Number of successful extensions: 18288
Number of sequences better than 0.5: 276
Number of HSP's better than 0.5 without gapping: 310
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14889
Number of HSP's gapped (non-prelim): 3330
length of query: 607
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 586
effective length of database: 2,791,206,460
effective search space: 1635646985560
effective search space used: 1635646985560
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)