BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3203838.2.1
(534 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK102452.1| Oryza sativa (japonica cultivar-group) cDNA... 256 1e-065
ref|XM_473865.1| Oryza sativa (japonica cultivar-group), p... 256 1e-065
gb|AU108632.1|AU108632 AU108632 Rice callus Oryza sativa (j... 240 6e-061
gb|AU161243.1|AU161243 AU161243 Rice callus Oryza sativa (j... 236 1e-059
gb|AACV01010470.1| Oryza sativa (japonica cultivar-group) c... 192 1e-046
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 192 1e-046
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 192 1e-046
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 192 1e-046
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 192 1e-046
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 192 1e-046
gb|AU092209.1|AU092209 AU092209 Rice callus Oryza sativa (j... 188 2e-045
dbj|AP005731.3| Oryza sativa (japonica cultivar-group) geno... 145 3e-032
gb|AACV01017831.1| Oryza sativa (japonica cultivar-group) c... 145 3e-032
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 145 3e-032
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 145 3e-032
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 145 3e-032
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 145 3e-032
gb|C96665.1|C96665 C96665 Rice callus Oryza sativa (japonic... 127 7e-027
dbj|AP005324.3| Oryza sativa (japonica cultivar-group) geno... 113 1e-022
gb|AACV01017618.1| Oryza sativa (japonica cultivar-group) c... 113 1e-022
gb|CH401229.1| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
gb|AU101206.1|AU101206 AU101206 Rice panicle at flowering s... 103 9e-020
dbj|AK099176.1| Oryza sativa (japonica cultivar-group) cDNA... 103 9e-020
dbj|AK104047.1| Oryza sativa (japonica cultivar-group) cDNA... 103 9e-020
gb|AC087542.3| Oryza sativa (japonica cultivar-group) chrom... 103 9e-020
gb|AACV01021603.1| Oryza sativa (japonica cultivar-group) c... 103 9e-020
ref|NM_196623.1| Oryza sativa (japonica cultivar-group) put... 103 9e-020
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 103 9e-020
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 103 9e-020
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 103 9e-020
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 103 9e-020
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 103 9e-020
dbj|AK069040.1| Oryza sativa (japonica cultivar-group) cDNA... 96 2e-017
gb|CF452785.1|CF452785 EST00001 Subtracted cDNA library of ... 50 0.001
dbj|AG213128.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AG213548.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AG213723.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AG213908.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AG213976.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AG024570.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AB155292.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AB156800.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AB157529.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.005
dbj|AG209278.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213123.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213124.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213129.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213207.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213285.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213309.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213581.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213722.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213724.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213745.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213872.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG213959.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG214163.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG214194.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG021970.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG024540.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG024556.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG024565.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG024874.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG025267.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG025393.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG025457.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG025462.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AG025544.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB154987.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB155450.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB155496.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157011.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157080.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157275.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157330.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157416.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157423.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157587.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157668.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157705.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157764.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB155376.2| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB156990.2| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157415.2| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157466.2| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
dbj|AB157563.2| Oryza sativa (japonica cultivar-group) DNA,... 46 0.019
gb|DU711782.1|DU711782 LW1258_TT57-38-1 CSIROPIFGRTT_DSTDNA... 46 0.019
gb|DU711787.1|DU711787 LW1185_TT41-340-1-4 CSIROPIFGRTT_DST... 46 0.019
gb|BF889487.1|BF889487 EST056 Subtracted cDNA library of JA... 46 0.019
dbj|AG213126.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AG213230.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AG214478.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AG021086.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AG024555.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AG205322.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB154905.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB155884.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB155930.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB156010.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB156464.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB157268.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB157360.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB157398.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB157628.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB157724.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB157742.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
dbj|AB158052.2| Oryza sativa (japonica cultivar-group) DNA,... 44 0.076
gb|DU711657.1|DU711657 LW1226_TT42-25-1-4 CSIROPIFGRTT_DSTD... 44 0.076
dbj|AG213125.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG213253.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG214847.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG214966.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG215047.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG024553.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG024559.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG024977.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG025117.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG025364.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG206043.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG207310.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB155391.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB155466.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB155599.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB155607.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB155642.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB155981.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB156159.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB156243.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB156331.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB156813.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB156889.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB156901.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157065.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157086.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157374.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157397.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157497.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157771.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157787.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB158032.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG024547.2| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG024890.2| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AG025126.2| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
dbj|AB157571.2| Oryza sativa (japonica cultivar-group) DNA,... 42 0.30
gb|AU077742.1|AU077742 AU077742 Rice cDNA from young root O... 42 0.30
gb|CA758951.1|CA758951 BR030033000_PLATE_H05_40_046.ab1 OA ... 42 0.30
dbj|AB071805.1| Oryza sativa (japonica cultivar-group) mRNA... 42 0.30
dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.30
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 42 0.30
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 42 0.30
gb|AACV01019921.1| Oryza sativa (japonica cultivar-group) c... 42 0.30
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 42 0.30
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.30
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.30
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 42 0.30
>dbj|AK102452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P08, full
insert sequence
Length = 1329
Score = 256 bits (129), Expect = 1e-065
Identities = 246/285 (86%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 1175 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 1116
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 1115 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 1056
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 1055 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 996
Query: 404 gagtcttgcccccagtaaccaaagagaaggcagagatctgcagaggcttctcaggcaggc 463
| |||||||||| |||||||| ||||| | |||||| |||||||||||||||||||
Sbjct: 995 gtatcttgccccctccaaccaaagcgaaggttgggatctggagaggcttctcaggcaggc 936
Query: 464 caagcaggatcatcttgccctggggcttgaggagagcaaggtaag 508
||| || |||||||||||||| |||||| | ||| || |||||||
Sbjct: 935 caaccaagatcatcttgcccttgggcttcaagagtgccaggtaag 891
>ref|XM_473865.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1233
Score = 256 bits (129), Expect = 1e-065
Identities = 246/285 (86%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 1222 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 1163
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 1162 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 1103
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 1102 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 1043
Query: 404 gagtcttgcccccagtaaccaaagagaaggcagagatctgcagaggcttctcaggcaggc 463
| |||||||||| |||||||| ||||| | |||||| |||||||||||||||||||
Sbjct: 1042 gtatcttgccccctccaaccaaagcgaaggttgggatctggagaggcttctcaggcaggc 983
Query: 464 caagcaggatcatcttgccctggggcttgaggagagcaaggtaag 508
||| || |||||||||||||| |||||| | ||| || |||||||
Sbjct: 982 caaccaagatcatcttgcccttgggcttcaagagtgccaggtaag 938
>gb|AU108632.1|AU108632 AU108632 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12777, mRNA sequence
Length = 717
Score = 240 bits (121), Expect = 6e-061
Identities = 245/285 (85%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 442 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 383
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 382 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 323
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| ||||| || |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 322 cggcggcgaa-tcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 264
Query: 404 gagtcttgcccccagtaaccaaagagaaggcagagatctgcagaggcttctcaggcaggc 463
| |||||||||| |||||||| ||||| | |||||| |||||||||||||||||||
Sbjct: 263 gtatcttgccccctccaaccaaagcgaaggttgggatctggagaggcttctcaggcaggc 204
Query: 464 caagcaggatcatcttgccctggggcttgaggagagcaaggtaag 508
||| || |||||||||||||| |||||| | ||| || |||||||
Sbjct: 203 caaccaagatcatcttgcccttgggcttcaagagtgccaggtaag 159
>gb|AU161243.1|AU161243 AU161243 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60669, mRNA sequence
Length = 559
Score = 236 bits (119), Expect = 1e-059
Identities = 245/286 (85%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 349 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 290
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 289 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 230
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 229 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 170
Query: 404 gagtcttg-cccccagtaaccaaagagaaggcagagatctgcagaggcttctcaggcagg 462
| ||||| ||||| |||||||| ||||| | |||||| ||||||||||||||||||
Sbjct: 169 gtatcttgnccccctccaaccaaagcgaaggttgggatctggagaggcttctcaggcagg 110
Query: 463 ccaagcaggatcatcttgccctggggcttgaggagagcaaggtaag 508
||| || |||||||||||||| |||||| | ||| || |||||||
Sbjct: 109 ncaaccaagatcatcttgcccttgggcttcaagagtgccaggtaag 64
>gb|AACV01010470.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010470, whole
genome shotgun sequence
Length = 19274
Score = 192 bits (97), Expect = 1e-046
Identities = 169/193 (87%)
Strand = Plus / Plus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 15781 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 15840
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 15841 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 15900
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 15901 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 15960
Query: 404 gagtcttgccccc 416
| ||||||||||
Sbjct: 15961 gtatcttgccccc 15973
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 420 aaccaaagagaaggcagagatctgcagaggcttctcaggcaggccaagcaggatcatctt 479
|||||||| ||||| | |||||| |||||||||||||||||||||| || |||||||||
Sbjct: 16078 aaccaaagcgaaggttgggatctggagaggcttctcaggcaggccaaccaagatcatctt 16137
Query: 480 gccctggggcttgaggagagcaaggtaag 508
||||| |||||| | ||| || |||||||
Sbjct: 16138 gcccttgggcttcaagagtgccaggtaag 16166
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 192 bits (97), Expect = 1e-046
Identities = 169/193 (87%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 1004099 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 1004040
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 1004039 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 1003980
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 1003979 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 1003920
Query: 404 gagtcttgccccc 416
| ||||||||||
Sbjct: 1003919 gtatcttgccccc 1003907
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 420 aaccaaagagaaggcagagatctgcagaggcttctcaggcaggccaagcaggatcatctt 479
|||||||| ||||| | |||||| |||||||||||||||||||||| || |||||||||
Sbjct: 1003802 aaccaaagcgaaggttgggatctggagaggcttctcaggcaggccaaccaagatcatctt 1003743
Query: 480 gccctggggcttgaggagagcaaggtaag 508
||||| |||||| | ||| || |||||||
Sbjct: 1003742 gcccttgggcttcaagagtgccaggtaag 1003714
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 192 bits (97), Expect = 1e-046
Identities = 169/193 (87%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 8802570 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 8802511
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 8802510 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 8802451
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 8802450 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 8802391
Query: 404 gagtcttgccccc 416
| ||||||||||
Sbjct: 8802390 gtatcttgccccc 8802378
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 420 aaccaaagagaaggcagagatctgcagaggcttctcaggcaggccaagcaggatcatctt 479
|||||||| ||||| | |||||| |||||||||||||||||||||| || |||||||||
Sbjct: 8802273 aaccaaagcgaaggttgggatctggagaggcttctcaggcaggccaaccaagatcatctt 8802214
Query: 480 gccctggggcttgaggagagcaaggtaag 508
||||| |||||| | ||| || |||||||
Sbjct: 8802213 gcccttgggcttcaagagtgccaggtaag 8802185
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 192 bits (97), Expect = 1e-046
Identities = 169/193 (87%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 27946669 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 27946610
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 27946609 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 27946550
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 27946549 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 27946490
Query: 404 gagtcttgccccc 416
| ||||||||||
Sbjct: 27946489 gtatcttgccccc 27946477
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 420 aaccaaagagaaggcagagatctgcagaggcttctcaggcaggccaagcaggatcatctt 479
|||||||| ||||| | |||||| |||||||||||||||||||||| || |||||||||
Sbjct: 27946372 aaccaaagcgaaggttgggatctggagaggcttctcaggcaggccaaccaagatcatctt 27946313
Query: 480 gccctggggcttgaggagagcaaggtaag 508
||||| |||||| | ||| || |||||||
Sbjct: 27946312 gcccttgggcttcaagagtgccaggtaag 27946284
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
complete sequence
Length = 160484
Score = 192 bits (97), Expect = 1e-046
Identities = 169/193 (87%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 89568 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 89509
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 89508 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 89449
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 89448 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 89389
Query: 404 gagtcttgccccc 416
| ||||||||||
Sbjct: 89388 gtatcttgccccc 89376
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 420 aaccaaagagaaggcagagatctgcagaggcttctcaggcaggccaagcaggatcatctt 479
|||||||| ||||| | |||||| |||||||||||||||||||||| || |||||||||
Sbjct: 89271 aaccaaagcgaaggttgggatctggagaggcttctcaggcaggccaaccaagatcatctt 89212
Query: 480 gccctggggcttgaggagagcaaggtaag 508
||||| |||||| | ||| || |||||||
Sbjct: 89211 gcccttgggcttcaagagtgccaggtaag 89183
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 192 bits (97), Expect = 1e-046
Identities = 169/193 (87%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 31107487 tgagggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 31107428
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| || | || ||||||||
Sbjct: 31107427 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccaccccgtgct 31107368
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| |||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 31107367 cggcggcgaagtcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 31107308
Query: 404 gagtcttgccccc 416
| ||||||||||
Sbjct: 31107307 gtatcttgccccc 31107295
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 420 aaccaaagagaaggcagagatctgcagaggcttctcaggcaggccaagcaggatcatctt 479
|||||||| ||||| | |||||| |||||||||||||||||||||| || |||||||||
Sbjct: 31107190 aaccaaagcgaaggttgggatctggagaggcttctcaggcaggccaaccaagatcatctt 31107131
Query: 480 gccctggggcttgaggagagcaaggtaag 508
||||| |||||| | ||| || |||||||
Sbjct: 31107130 gcccttgggcttcaagagtgccaggtaag 31107102
>gb|AU092209.1|AU092209 AU092209 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11403, mRNA sequence
Length = 618
Score = 188 bits (95), Expect = 2e-045
Identities = 223/265 (84%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 224 tgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgtt 283
||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct: 305 tgagggtnttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgct 246
Query: 284 ccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgct 343
|||||||| || || || |||| ||||||||| |||||||| | | || ||||||||
Sbjct: 245 ccatggccgtgttcacctcgtcggcgccgatcagctcgatgtcggnggccaccccgtgct 186
Query: 344 tggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcca 403
||| ||||| || |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct: 185 cggcggcgaa-tcgatcatctcctgcgtttcactgatgctccccatgcagctcccagcta 127
Query: 404 gagtcttgcccccagtaaccaaagagaaggcagagatctgcagaggcttctcaggcaggc 463
| |||||||||| |||||||| |||| | ||| || ||||||||||||||||||
Sbjct: 126 gtatcttgccccctncaaccaaagcgaagtttg-gatntggagaggcttctcaggcaggn 68
Query: 464 caagcaggatcatcttgccctgggg 488
||| || |||||||||| ||| |||
Sbjct: 67 caaccaagatcatcttggcctnggg 43
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0091D16
Length = 174222
Score = 145 bits (73), Expect = 3e-032
Identities = 160/189 (84%)
Strand = Plus / Plus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 50035 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 50094
Query: 283 tccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgc 342
||||||||| || || | |||| |||||||| ||||| ||||| |||| ||||||
Sbjct: 50095 tccatggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgc 50154
Query: 343 ttggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcc 402
|| ||||| | ||| |||||||||| ||||||| |||| || |||||||||||||||
Sbjct: 50155 ttcgctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggcc 50214
Query: 403 agagtcttg 411
|| ||||||
Sbjct: 50215 agcgtcttg 50223
>gb|AACV01017831.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017831, whole
genome shotgun sequence
Length = 51102
Score = 145 bits (73), Expect = 3e-032
Identities = 160/189 (84%)
Strand = Plus / Minus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 3876 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 3817
Query: 283 tccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgc 342
||||||||| || || | |||| |||||||| ||||| ||||| |||| ||||||
Sbjct: 3816 tccatggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgc 3757
Query: 343 ttggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcc 402
|| ||||| | ||| |||||||||| ||||||| |||| || |||||||||||||||
Sbjct: 3756 ttcgctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggcc 3697
Query: 403 agagtcttg 411
|| ||||||
Sbjct: 3696 agcgtcttg 3688
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 145 bits (73), Expect = 3e-032
Identities = 160/189 (84%)
Strand = Plus / Plus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 10116603 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 10116662
Query: 283 tccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgc 342
||||||||| || || | |||| |||||||| ||||| ||||| |||| ||||||
Sbjct: 10116663 tccatggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgc 10116722
Query: 343 ttggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcc 402
|| ||||| | ||| |||||||||| ||||||| |||| || |||||||||||||||
Sbjct: 10116723 ttcgctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggcc 10116782
Query: 403 agagtcttg 411
|| ||||||
Sbjct: 10116783 agcgtcttg 10116791
Score = 113 bits (57), Expect = 1e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 7120672 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 7120613
Query: 283 tccatggcc 291
|||||||||
Sbjct: 7120612 tccatggcc 7120604
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 145 bits (73), Expect = 3e-032
Identities = 160/189 (84%)
Strand = Plus / Plus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 2161895 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 2161954
Query: 283 tccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgc 342
||||||||| || || | |||| |||||||| ||||| ||||| |||| ||||||
Sbjct: 2161955 tccatggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgc 2162014
Query: 343 ttggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcc 402
|| ||||| | ||| |||||||||| ||||||| |||| || |||||||||||||||
Sbjct: 2162015 ttcgctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggcc 2162074
Query: 403 agagtcttg 411
|| ||||||
Sbjct: 2162075 agcgtcttg 2162083
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 145 bits (73), Expect = 3e-032
Identities = 160/189 (84%)
Strand = Plus / Plus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 9763901 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 9763960
Query: 283 tccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgc 342
||||||||| || || | |||| |||||||| ||||| ||||| |||| ||||||
Sbjct: 9763961 tccatggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgc 9764020
Query: 343 ttggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcc 402
|| ||||| | ||| |||||||||| ||||||| |||| || |||||||||||||||
Sbjct: 9764021 ttcgctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggcc 9764080
Query: 403 agagtcttg 411
|| ||||||
Sbjct: 9764081 agcgtcttg 9764089
Score = 113 bits (57), Expect = 1e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 6758489 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 6758430
Query: 283 tccatggcc 291
|||||||||
Sbjct: 6758429 tccatggcc 6758421
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 145 bits (73), Expect = 3e-032
Identities = 160/189 (84%)
Strand = Plus / Plus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 10349077 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 10349136
Query: 283 tccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccgtgc 342
||||||||| || || | |||| |||||||| ||||| ||||| |||| ||||||
Sbjct: 10349137 tccatggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgc 10349196
Query: 343 ttggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggcc 402
|| ||||| | ||| |||||||||| ||||||| |||| || |||||||||||||||
Sbjct: 10349197 ttcgctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggcc 10349256
Query: 403 agagtcttg 411
|| ||||||
Sbjct: 10349257 agcgtcttg 10349265
Score = 113 bits (57), Expect = 1e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 7353146 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 7353087
Query: 283 tccatggcc 291
|||||||||
Sbjct: 7353086 tccatggcc 7353078
>gb|C96665.1|C96665 C96665 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10545_6Z, mRNA sequence
Length = 658
Score = 127 bits (64), Expect = 7e-027
Identities = 222/264 (84%), Gaps = 8/264 (3%)
Strand = Plus / Minus
Query: 224 tgagggtgttg-ccgatgtcgatgacgaagcggtacctgacc-tcgcccttggcgagg-c 280
||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||| |
Sbjct: 350 tgagggtgttgaccgatgtcgacgacgaagcggtacctgaacgtcgcccttggcgaggac 291
Query: 281 gttcc-atgg-cctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaaccc 338
| ||| |||| || || || || |||| ||||||||| |||||||| || | || |||
Sbjct: 290 gctcccatggnccgtgttcacctcgtcggcgccgatcagctcgatgtcggcggccacccc 231
Query: 339 gtgcttggctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctccc 398
||||| ||| ||||| || |||||||||||||| || |||||||||||||||||||||||
Sbjct: 230 gtgctcggcggcgaa-tcgatcatctcctgcgtttcactgatgctccccatgcagctccc 172
Query: 399 ggccagagtcttgcccccagtaaccaaagagaaggcagagat-ct-gcagaggcttctca 456
|| || |||||||||| |||||||| ||||| | ||| || | ||||||||||||
Sbjct: 171 agctagtatcttgccccctccaaccaaagcgaaggttgggatnctggaagaggcttctca 112
Query: 457 ggcaggccaagcaggatcatcttg 480
|||||||||| || ||||||||||
Sbjct: 111 ggcaggccaaccaagatcatcttg 88
>dbj|AP005324.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0691F12
Length = 139482
Score = 113 bits (57), Expect = 1e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 92575 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 92516
Query: 283 tccatggcc 291
|||||||||
Sbjct: 92515 tccatggcc 92507
>gb|AACV01017618.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017618, whole
genome shotgun sequence
Length = 9529
Score = 113 bits (57), Expect = 1e-022
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 4943 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 5002
Query: 283 tccatggcc 291
|||||||||
Sbjct: 5003 tccatggcc 5011
>gb|CH401229.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000066 genomic
scaffold, whole genome shotgun sequence
Length = 2575203
Score = 113 bits (57), Expect = 1e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 223 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgt 282
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1731786 ttgagggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgc 1731727
Query: 283 tccatggcc 291
|||||||||
Sbjct: 1731726 tccatggcc 1731718
>gb|AU101206.1|AU101206 AU101206 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2554, mRNA sequence
Length = 553
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 318 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 259
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 258 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 199
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 198 tgcttcgccgccagctcgatcatctcctgcgtgtcc 163
>dbj|AK099176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090E20, full
insert sequence
Length = 1394
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 1164 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 1105
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 1104 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 1045
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 1044 tgcttcgccgccagctcgatcatctcctgcgtgtcc 1009
>dbj|AK104047.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H02, full
insert sequence
Length = 1416
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 1200 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 1141
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 1140 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 1081
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 1080 tgcttcgccgccagctcgatcatctcctgcgtgtcc 1045
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04,
complete sequence
Length = 155372
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 115159 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 115218
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 115219 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 115278
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 115279 tgcttcgccgccagctcgatcatctcctgcgtgtcc 115314
>gb|AACV01021603.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021603, whole
genome shotgun sequence
Length = 3646
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 1053 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 1112
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 1113 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 1172
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 1173 tgcttcgccgccagctcgatcatctcctgcgtgtcc 1208
>ref|NM_196623.1| Oryza sativa (japonica cultivar-group) putative cinnamyl alcohol
dehydrogenase (OSJNBa0073D04.1), mRNA
Length = 1491
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 1247 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 1188
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 1187 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 1128
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 1127 tgcttcgccgccagctcgatcatctcctgcgtgtcc 1092
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 1521639 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 1521698
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 1521699 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 1521758
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 1521759 tgcttcgccgccagctcgatcatctcctgcgtgtcc 1521794
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 2763045 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 2763104
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 2763105 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 2763164
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 2763165 tgcttcgccgccagctcgatcatctcctgcgtgtcc 2763200
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 13628839 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 13628898
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 13628899 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 13628958
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 13628959 tgcttcgccgccagctcgatcatctcctgcgtgtcc 13628994
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 14790010 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 14790069
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 14790070 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 14790129
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 14790130 tgcttcgccgccagctcgatcatctcctgcgtgtcc 14790165
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 103 bits (52), Expect = 9e-020
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 14798251 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 14798310
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| |||
Sbjct: 14798311 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccg 14798370
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 14798371 tgcttcgccgccagctcgatcatctcctgcgtgtcc 14798406
>dbj|AK069040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B20, full
insert sequence
Length = 1565
Score = 95.6 bits (48), Expect = 2e-017
Identities = 129/156 (82%)
Strand = Plus / Minus
Query: 220 gcgttgagggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgagg 279
|||| ||||||||| |||| ||||||||||||||| |||||||| || |||||||||||
Sbjct: 1286 gcgtggagggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgagg 1227
Query: 280 cgttccatggcctcattaacttcttcggtgccgatcagttcgatgtccgctgtcaacccg 339
|| ||||||||| || || || |||| |||||||| ||||||||||| |||| ||
Sbjct: 1226 cgctccatggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgcca 1167
Query: 340 tgcttggctgcgaagtccatcatctcctgcgtgtcc 375
||||| || || | || ||||||||||||||||||
Sbjct: 1166 tgcttcgccgccagctcgatcatctcctgcgtgtcc 1131
>gb|CF452785.1|CF452785 EST00001 Subtracted cDNA library of JA/BTH-treated rice leaf Oryza
sativa (japonica cultivar-group) cDNA clone JBI35, mRNA
sequence
Length = 350
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 510 gtacctgcccgggcggccgctcgaa 534
|||||||||||||||||||||||||
Sbjct: 25 gtacctgcccgggcggccgctcgaa 1
>dbj|AG213128.1| Oryza sativa (japonica cultivar-group) DNA, clone:T00161T, 3'
flanking sequence of Tos17 insertion in rice strain
H0592, genomic survey sequence
Length = 309
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 279 gtacctgcccgggcggccgctcga 302
>dbj|AG213548.1| Oryza sativa (japonica cultivar-group) DNA, clone:T09682T, 3'
flanking sequence of Tos17 insertion in rice strain
ND4557, genomic survey sequence
Length = 353
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 145 gtacctgcccgggcggccgctcga 168
>dbj|AG213723.1| Oryza sativa (japonica cultivar-group) DNA, clone:T10610T, 3'
flanking sequence of Tos17 insertion in rice strain
ND6065, genomic survey sequence
Length = 329
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 269 gtacctgcccgggcggccgctcga 292
>dbj|AG213908.1| Oryza sativa (japonica cultivar-group) DNA, clone:T11702T, 3'
flanking sequence of Tos17 insertion in rice strain
ND8064, genomic survey sequence
Length = 339
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 246 gtacctgcccgggcggccgctcga 269
>dbj|AG213976.1| Oryza sativa (japonica cultivar-group) DNA, clone:T11953T, 3'
flanking sequence of Tos17 insertion in rice strain
ND9058, genomic survey sequence
Length = 210
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 147 gtacctgcccgggcggccgctcga 170
>dbj|AG024570.1| Oryza sativa (japonica cultivar-group) DNA, clone:T00181T, 3'
flanking sequence of Tos17 insertion in rice strain
H0615, genomic survey sequence
Length = 447
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 420 gtacctgcccgggcggccgctcga 443
>dbj|AB155292.1| Oryza sativa (japonica cultivar-group) DNA, clone:T25630T, 3'
flanking sequence of Tos17 insertion in rice strain
NF8002, genomic survey sequence
Length = 485
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 207 gtacctgcccgggcggccgctcga 230
>dbj|AB156800.1| Oryza sativa (japonica cultivar-group) DNA, clone:T25930T, 3'
flanking sequence of Tos17 insertion in rice strain
NF9028, genomic survey sequence
Length = 385
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 315 gtacctgcccgggcggccgctcga 338
>dbj|AB157529.1| Oryza sativa (japonica cultivar-group) DNA, clone:T28812T, 3'
flanking sequence of Tos17 insertion in rice strain
NG1017, genomic survey sequence
Length = 253
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 510 gtacctgcccgggcggccgctcga 533
||||||||||||||||||||||||
Sbjct: 201 gtacctgcccgggcggccgctcga 224
>dbj|AG209278.1| Oryza sativa (japonica cultivar-group) DNA, clone:T16966T, 3'
flanking sequence of Tos17 insertion in rice strain
NE8022, genomic survey sequence
Length = 327
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 511 tacctgcccgggcggccgctcga 533
|||||||||||||||||||||||
Sbjct: 291 tacctgcccgggcggccgctcga 313
>dbj|AG213123.1| Oryza sativa (japonica cultivar-group) DNA, clone:T00072T, 3'
flanking sequence of Tos17 insertion in rice strain
H0268, genomic survey sequence
Length = 147
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 511 tacctgcccgggcggccgctcga 533
|||||||||||||||||||||||
Sbjct: 116 tacctgcccgggcggccgctcga 138
>dbj|AG213124.1| Oryza sativa (japonica cultivar-group) DNA, clone:T00091T, 3'
flanking sequence of Tos17 insertion in rice strain
H0363, genomic survey sequence
Length = 383
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 511 tacctgcccgggcggccgctcga 533
|||||||||||||||||||||||
Sbjct: 361 tacctgcccgggcggccgctcga 383
>dbj|AG213129.1| Oryza sativa (japonica cultivar-group) DNA, clone:T00163T, 3'
flanking sequence of Tos17 insertion in rice strain
H0596, genomic survey sequence
Length = 368
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 511 tacctgcccgggcggccgctcga 533
|||||||||||||||||||||||
Sbjct: 339 tacctgcccgggcggccgctcga 361
>dbj|AG213207.1| Oryza sativa (japonica cultivar-group) DNA, clone:T02943T, 3'
flanking sequence of Tos17 insertion in rice strain
NC0384, genomic survey sequence
Length = 280
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 511 tacctgcccgggcggccgctcga 533
|||||||||||||||||||||||
Sbjct: 244 tacctgcccgggcggccgctcga 266
>dbj|AG213285.1| Oryza sativa (japonica cultivar-group) DNA, clone:T06795T, 3'
flanking sequence of Tos17 insertion in rice strain
NC2764, genomic survey sequence
Length = 183
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 511 tacctgcccgggcggccgctcga 533
|||||||||||||||||||||||
Sbjct: 141 tacctgcccgggcggccgctcga 163
>dbj|AG213309.1| Oryza sativa (japonica cultivar-group) DNA, clone:T07737T, 3'
flanking sequence of Tos17 insertion in rice strain
ND1024, genomic survey sequence
Length = 261
Score = 46.1 bits (23), Expect = 0.019
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 511 tacctgcccgggcggccgctcga 533
|||||||||||||||||||||||
Sbjct: 165 tacctgcccgggcggccgctcga 187
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 694,291
Number of Sequences: 438736
Number of extensions: 694291
Number of successful extensions: 15425
Number of sequences better than 0.5: 160
Number of HSP's better than 0.5 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14753
Number of HSP's gapped (non-prelim): 646
length of query: 534
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 513
effective length of database: 2,791,206,460
effective search space: 1431888913980
effective search space used: 1431888913980
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)