BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198841.2.3
(792 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB657180.1|CB657180 OSJNEc12F03.f OSJNEc Oryza sativa (j... 432 e-118
gb|CB660780.1|CB660780 OSJNEd02N17.f OSJNEd Oryza sativa (j... 432 e-118
gb|CB677076.1|CB677076 OSJNEe13L03.f OSJNEe Oryza sativa (j... 432 e-118
gb|CF307536.1|CF307536 HDA1--06-P18.g1 OsHDAC1-overexpressi... 432 e-118
dbj|AK068005.1| Oryza sativa (japonica cultivar-group) cDNA... 432 e-118
ref|NM_191787.1| Oryza sativa (japonica cultivar-group), p... 432 e-118
gb|CB657222.1|CB657222 OSJNEc12G05.f OSJNEc Oryza sativa (j... 426 e-117
dbj|AK062155.1| Oryza sativa (japonica cultivar-group) cDNA... 424 e-116
gb|AY574990.1| Oryza sativa (japonica cultivar-group) zinc ... 424 e-116
gb|CB674459.1|CB674459 OSJNEe09I08.f OSJNEe Oryza sativa (j... 400 e-109
gb|CB673344.1|CB673344 OSJNEe07N04.f OSJNEe Oryza sativa (j... 391 e-106
gb|CF323369.1|CF323369 HDN--03-K18.g1 OsHDAC1-overexpressin... 371 e-100
gb|CF309859.1|CF309859 ABF--04-D17.b1 ABF3-overexpressing t... 369 2e-099
dbj|AK070809.1| Oryza sativa (japonica cultivar-group) cDNA... 325 2e-086
gb|CB662978.1|CB662978 OSJNEd07H14.f OSJNEd Oryza sativa (j... 319 1e-084
gb|CF322854.1|CF322854 HDN--02-E04.g1 OsHDAC1-overexpressin... 315 2e-083
gb|CF323076.1|CF323076 HDN--02-N18.g1 OsHDAC1-overexpressin... 315 2e-083
gb|CF315534.1|CF315534 HD--04-H22.g1 OsHDAC1-overexpressing... 311 3e-082
gb|CF315810.1|CF315810 HD--04-N21.g1 OsHDAC1-overexpressing... 311 3e-082
gb|CF324509.1|CF324509 HDN--06-L16.g1 OsHDAC1-overexpressin... 307 5e-081
gb|CB662000.1|CB662000 OSJNEd05J09.f OSJNEd Oryza sativa (j... 289 1e-075
gb|CF322458.1|CF322458 HDN--01-B20.g1 OsHDAC1-overexpressin... 274 7e-071
gb|CB665389.1|CB665389 OSJNEd11M06.f OSJNEd Oryza sativa (j... 262 3e-067
gb|CB650078.1|CB650078 OSJNEb14F12.f OSJNEb Oryza sativa (j... 256 2e-065
gb|CB672595.1|CB672595 OSJNEe06L08.f OSJNEe Oryza sativa (j... 248 4e-063
gb|CF317867.1|CF317867 HD--07-L11.g1 OsHDAC1-overexpressing... 248 4e-063
gb|CF308291.1|CF308291 ABF--02-A24.b1 ABF3-overexpressing t... 230 9e-058
gb|CF322996.1|CF322996 HDN--02-K08.g1 OsHDAC1-overexpressin... 228 4e-057
gb|CB672285.1|CB672285 OSJNEe06D23.f OSJNEe Oryza sativa (j... 220 9e-055
gb|CF323458.1|CF323458 HDN--03-O12.g1 OsHDAC1-overexpressin... 216 1e-053
gb|CB665206.1|CB665206 OSJNEd11G24.f OSJNEd Oryza sativa (j... 206 1e-050
gb|AU075486.1|AU075486 AU075486 Rice cDNA from immature lea... 198 3e-048
gb|CF323140.1|CF323140 HDN--03-A13.g1 OsHDAC1-overexpressin... 198 3e-048
gb|CF310830.1|CF310830 ABF--05-L11.b1 ABF3-overexpressing t... 151 7e-034
gb|C96813.1|C96813 C96813 Rice callus Oryza sativa (japonic... 143 2e-031
gb|CB636892.1|CB636892 OSJNEa02N23.f OSJNEa Oryza sativa (j... 143 2e-031
gb|CB663092.1|CB663092 OSJNEd07L03.f OSJNEd Oryza sativa (j... 127 1e-026
gb|C72284.1|C72284 C72284 Rice panicle at flowering stage O... 121 6e-025
gb|AACV01002243.1| Oryza sativa (japonica cultivar-group) c... 113 1e-022
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 113 1e-022
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 113 1e-022
dbj|AP003453.3| Oryza sativa (japonica cultivar-group) geno... 113 1e-022
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 113 1e-022
gb|CF322768.1|CF322768 HDN--02-A06.g1 OsHDAC1-overexpressin... 111 6e-022
gb|CF321633.1|CF321633 HD--12-P07.b1 OsHDAC1-overexpressing... 109 2e-021
gb|CF311216.1|CF311216 ABF--06-F17.b1 ABF3-overexpressing t... 101 6e-019
gb|CB675652.1|CB675652 OSJNEe11I08.r OSJNEe Oryza sativa (j... 98 9e-018
gb|CB674460.1|CB674460 OSJNEe09I08.r OSJNEe Oryza sativa (j... 94 1e-016
gb|CB665390.1|CB665390 OSJNEd11M06.r OSJNEd Oryza sativa (j... 72 5e-010
gb|CB641203.1|CB641203 OSJNEa18D24.f OSJNEa Oryza sativa (j... 54 1e-004
gb|CB664550.1|CB664550 OSJNEd10F08.f OSJNEd Oryza sativa (j... 54 1e-004
gb|CF303761.1|CF303761 ABF1--03-C09.g1 ABF3-overexpressing ... 54 1e-004
gb|CF307355.1|CF307355 HDA1--06-H12.g1 OsHDAC1-overexpressi... 54 1e-004
gb|CF307498.1|CF307498 HDA1--06-O02.g1 OsHDAC1-overexpressi... 54 1e-004
gb|CF323379.1|CF323379 HDN--03-L05.g1 OsHDAC1-overexpressin... 54 1e-004
gb|CF324068.1|CF324068 HDN--05-I17.g1 OsHDAC1-overexpressin... 54 1e-004
gb|CB650079.1|CB650079 OSJNEb14F12.r OSJNEb Oryza sativa (j... 50 0.002
gb|AQ912231.1|AQ912231 nbeb0034F13f CUGI Rice BAC Library (... 44 0.11
gb|AC108498.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|AC137001.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|AACV01011171.1| Oryza sativa (japonica cultivar-group) c... 44 0.11
ref|XM_476180.1| Oryza sativa (japonica cultivar-group), p... 44 0.11
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 44 0.11
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.11
>gb|CB657180.1|CB657180 OSJNEc12F03.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12F03 5', mRNA sequence
Length = 827
Score = 432 bits (218), Expect = e-118
Identities = 410/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 354 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 413
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 414 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 473
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 474 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 533
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 534 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 593
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 594 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 653
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 654 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 713
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 714 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 773
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 774 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 827
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 216 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 275
Query: 247 agttaaa 253
|| ||||
Sbjct: 276 agataaa 282
>gb|CB660780.1|CB660780 OSJNEd02N17.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02N17 5', mRNA sequence
Length = 840
Score = 432 bits (218), Expect = e-118
Identities = 410/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 223 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 282
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 283 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 342
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 343 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 402
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 403 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 462
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 463 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 522
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 523 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 582
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 583 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 642
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 643 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 696
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 85 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 144
Query: 247 agttaaa 253
|| ||||
Sbjct: 145 agataaa 151
>gb|CB677076.1|CB677076 OSJNEe13L03.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe13L03 5', mRNA sequence
Length = 806
Score = 432 bits (218), Expect = e-118
Identities = 410/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 50 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 109
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 110 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 169
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 170 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 229
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 230 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 289
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 290 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 349
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 350 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 409
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 410 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 469
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 470 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 523
>gb|CF307536.1|CF307536 HDA1--06-P18.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-P18, mRNA sequence
Length = 729
Score = 432 bits (218), Expect = e-118
Identities = 410/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 232 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 291
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 292 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 351
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 352 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 411
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 412 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 471
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 472 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 531
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 532 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 591
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 592 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 651
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 652 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 705
Score = 44.1 bits (22), Expect = 0.11
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggac 240
|||||||||||||| ||||| |||| ||||| | | || ||| |||||||||||
Sbjct: 94 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggac 147
>dbj|AK068005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130E06, full
insert sequence
Length = 1843
Score = 432 bits (218), Expect = e-118
Identities = 410/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 488 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 547
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 548 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 607
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 608 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 667
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 668 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 727
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 728 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 787
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 788 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 847
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 848 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 907
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 908 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 961
Score = 46.1 bits (23), Expect = 0.029
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||| ||||||||| |
Sbjct: 350 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacgtggacaagcta 409
Query: 247 agttaaa 253
|| ||||
Sbjct: 410 agataaa 416
>ref|NM_191787.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 900
Score = 432 bits (218), Expect = e-118
Identities = 410/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 125 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 184
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 185 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 244
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 245 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 304
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 305 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 364
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 365 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 424
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 425 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 484
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 485 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 544
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 545 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 598
>gb|CB657222.1|CB657222 OSJNEc12G05.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12G05 5', mRNA sequence
Length = 862
Score = 426 bits (215), Expect = e-117
Identities = 409/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 354 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 413
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 414 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 473
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 474 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 533
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 534 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 593
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 594 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 653
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 654 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 713
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 714 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 773
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 774 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccnatctgctttgagt 827
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 216 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 275
Query: 247 agttaaa 253
|| ||||
Sbjct: 276 agataaa 282
>dbj|AK062155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H12, full
insert sequence
Length = 1692
Score = 424 bits (214), Expect = e-116
Identities = 409/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||| ||||
Sbjct: 371 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacgttatc 430
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 431 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 490
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 491 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 550
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 551 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 610
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 611 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 670
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 671 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 730
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 731 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 790
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 791 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 844
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 233 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 292
Query: 247 agttaaa 253
|| ||||
Sbjct: 293 agataaa 299
>gb|AY574990.1| Oryza sativa (japonica cultivar-group) zinc finger protein (Tranpr)
mRNA, complete cds
Length = 1393
Score = 424 bits (214), Expect = e-116
Identities = 409/474 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 181 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgcgcacattatc 240
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 241 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 300
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 301 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 360
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 361 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 420
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 421 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 480
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 481 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 540
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 541 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 600
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 601 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 654
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 43 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 102
Query: 247 agttaaa 253
|| ||||
Sbjct: 103 agataaa 109
>gb|CB674459.1|CB674459 OSJNEe09I08.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09I08 5', mRNA sequence
Length = 712
Score = 400 bits (202), Expect = e-109
Identities = 406/474 (85%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| |||| ||||||||||||| ||||||||| ||||||||
Sbjct: 171 accctgatgattatgagaaacttgacgaagggataatgcagtatgggtgtgcacattatc 230
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 231 gaacaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 290
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 291 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 350
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
|||||||||| |||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 351 atgaagtgcaacaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 410
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 411 gtatcacttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 470
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 471 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 530
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 531 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 590
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 591 gtcatgcatgtgttgaacgagcgatgcatcatgactgtccaatctgctttgagt 644
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 33 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 92
Query: 247 agttaaa 253
|| ||||
Sbjct: 93 agataaa 99
>gb|CB673344.1|CB673344 OSJNEe07N04.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07N04 5', mRNA sequence
Length = 849
Score = 391 bits (197), Expect = e-106
Identities = 389/453 (85%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 397 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 456
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 457 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 516
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 517 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 576
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 577 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 636
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 637 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 696
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 697 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 756
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 757 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 816
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatg 771
||||||||||||||||| | |||||||||||||
Sbjct: 817 gtcatgcatgtgttgaacgagcgatgcatcatg 849
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 259 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 318
Query: 247 agttaaa 253
|| ||||
Sbjct: 319 agataaa 325
>gb|CF323369.1|CF323369 HDN--03-K18.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-K18, mRNA sequence
Length = 572
Score = 371 bits (187), Expect = e-100
Identities = 404/475 (85%), Gaps = 1/475 (0%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||| ||| ||||| ||||||||||||| | ||||||| ||||||||
Sbjct: 74 accctgatgattatgataaacttgaggaagggataatgcaatgtgggtgtgcacattatc 133
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
||| || |||||||| ||||||| || |||| || ||||||||||| || || ||||
Sbjct: 134 gaataaggtgccgcattcgagctccatgttgcagcgagatttttgattgtcggcattgcc 193
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 194 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 253
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 254 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 313
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| || || ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 314 gtatcagttgtggagtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 373
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| | |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 374 atgatgtttgaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 433
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 434 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 493
Query: 739 gtcatgcatgtg-ttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 494 gtcatgcatgtgtttgaaggagcgatgcatcatgactgtccaatctgctttgagt 548
>gb|CF309859.1|CF309859 ABF--04-D17.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-D17, mRNA sequence
Length = 616
Score = 369 bits (186), Expect = 2e-099
Identities = 395/465 (84%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
||||||||| ||||||||| ||||| |||||||||||| ||||||||| ||||| ||
Sbjct: 152 accctgatggttatgagaaacttgaggaagggataatgcggtatgggtgtgcacatcatc 211
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 212 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 271
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 272 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 331
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
| ||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 332 acgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 391
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| |||| | |||| |||||||||| ||| ||| ||||| || |
Sbjct: 392 gtatcagttgtggtgtatgcaggnggaagtacttctgtgaagtgtacaagctctttgatg 451
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggaggga 678
||||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct: 452 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggca 511
Query: 679 gggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaata 738
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |
Sbjct: 512 aggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaaca 571
Query: 739 gtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatct 783
||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 572 gtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatct 616
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 14 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 73
Query: 247 agttaaa 253
|| ||||
Sbjct: 74 agataaa 80
>dbj|AK070809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072L02, full
insert sequence
Length = 2362
Score = 325 bits (164), Expect = 2e-086
Identities = 305/352 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 1995 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 2054
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 2055 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 2114
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 2115 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 2174
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 2175 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 2234
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 2235 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 2294
Query: 619 atgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaat 670
||||||| || |||||||| ||||| ||||| || ||||||||||| |||||
Sbjct: 2295 atgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaat 2346
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 1857 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 1916
Query: 247 agttaaa 253
|| ||||
Sbjct: 1917 agataaa 1923
>gb|CB662978.1|CB662978 OSJNEd07H14.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H14 5', mRNA sequence
Length = 808
Score = 319 bits (161), Expect = 1e-084
Identities = 302/349 (86%)
Strand = Plus / Plus
Query: 444 gaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaa 503
||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 1 gaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaa 60
Query: 504 gtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgtatc 563
|||||||||||| ||||||| ||||||||||| ||||| ||||| || ||||||||||||
Sbjct: 61 gtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtatgtatc 120
Query: 564 aattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacgatgat 623
| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || ||||||
Sbjct: 121 agttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgat 180
Query: 624 gtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggagggagggag 683
|| || |||||||| ||||| ||||| || ||||||||||| ||||| || || | ||||
Sbjct: 181 gtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggag 240
Query: 684 aatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagtcat 743
|||||||| ||||| |||||||| ||||| || ||||| || | ||||||| ||||||
Sbjct: 241 aatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagtcat 300
Query: 744 gcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 301 gcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 349
>gb|CF322854.1|CF322854 HDN--02-E04.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-E04, mRNA sequence
Length = 646
Score = 315 bits (159), Expect = 2e-083
Identities = 297/343 (86%)
Strand = Plus / Plus
Query: 450 aagaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcag 509
|||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 10 aagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcag 69
Query: 510 caggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgtatcaattgc 569
|||||| ||||||| ||||||||||| ||||| ||||| || ||||||||||||| |||
Sbjct: 70 caggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtatgtatcagttgt 129
Query: 570 ggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacgatgatgtctct 629
||||| ||||||||||| |||||||||| ||||||| ||||| || |||||||| ||
Sbjct: 130 ggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatgtttca 189
Query: 630 aaacagcagtatcactgcaacggatgtggaatatgtagaatcggagggagggagaatttc 689
|||||||| ||||| ||||| || ||||||||||| ||||| || || | ||||||||||
Sbjct: 190 aaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggagaatttc 249
Query: 690 ttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagtcatgcatgt 749
|| ||||| |||||||| ||||| || ||||| || | ||||||| ||||||||||||
Sbjct: 250 tttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagtcatgcatgt 309
Query: 750 gttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 310 gttgaaggagcgatgcatcatgactgtccaatctgctttgagt 352
>gb|CF323076.1|CF323076 HDN--02-N18.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-N18, mRNA sequence
Length = 362
Score = 315 bits (159), Expect = 2e-083
Identities = 297/343 (86%)
Strand = Plus / Plus
Query: 450 aagaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcag 509
|||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 10 aagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcag 69
Query: 510 caggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgtatcaattgc 569
|||||| ||||||| ||||||||||| ||||| ||||| || ||||||||||||| |||
Sbjct: 70 caggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtatgtatcagttgt 129
Query: 570 ggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacgatgatgtctct 629
||||| ||||||||||| |||||||||| ||||||| ||||| || |||||||| ||
Sbjct: 130 ggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatgtttca 189
Query: 630 aaacagcagtatcactgcaacggatgtggaatatgtagaatcggagggagggagaatttc 689
|||||||| ||||| ||||| || ||||||||||| ||||| || || | ||||||||||
Sbjct: 190 aaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggagaatttc 249
Query: 690 ttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagtcatgcatgt 749
|| ||||| |||||||| ||||| || ||||| || | ||||||| ||||||||||||
Sbjct: 250 tttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagtcatgcatgt 309
Query: 750 gttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 310 gttgaaggagcgatgcatcatgactgtccaatctgctttgagt 352
>gb|CF315534.1|CF315534 HD--04-H22.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-H22, mRNA sequence
Length = 621
Score = 311 bits (157), Expect = 3e-082
Identities = 305/353 (86%), Gaps = 1/353 (0%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 260 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 319
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 320 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 379
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 380 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 439
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 440 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 499
Query: 559 gtatcaattgcggtgtttgcatggg-gaaatacttctgtggtttgtgcaaactcttcgac 617
|||||| ||| ||||| |||||||| ||| |||||||||| ||||||| ||||| ||
Sbjct: 500 gtatcagttgtggtgtatgcatgggngaagtacttctgtgaagtgtgcaagctctttgat 559
Query: 618 gatgatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaat 670
|||||||| || |||||||| ||||| ||||| || ||||||||||| |||||
Sbjct: 560 gatgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaat 612
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 122 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 181
Query: 247 agttaaa 253
|| ||||
Sbjct: 182 agataaa 188
>gb|CF315810.1|CF315810 HD--04-N21.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-N21, mRNA sequence
Length = 603
Score = 311 bits (157), Expect = 3e-082
Identities = 283/325 (87%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 257 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 316
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| ||||| ||||
Sbjct: 317 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcgacattgcc 376
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 377 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 436
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 437 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 496
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 497 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 556
Query: 619 atgatgtctctaaacagcagtatca 643
||||||| || |||||||| |||||
Sbjct: 557 atgatgtttcaaaacagcaatatca 581
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 119 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 178
Query: 247 agttaaa 253
|| ||||
Sbjct: 179 agataaa 185
>gb|CF324509.1|CF324509 HDN--06-L16.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--06-L16, mRNA sequence
Length = 531
Score = 307 bits (155), Expect = 5e-081
Identities = 287/331 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 201 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 260
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 261 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 320
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 321 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 380
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 381 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 440
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 441 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 500
Query: 619 atgatgtctctaaacagcagtatcactgcaa 649
||||||| || |||||||| ||||| |||||
Sbjct: 501 atgatgtttcaaaacagcaatatcattgcaa 531
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 63 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 122
Query: 247 agttaaa 253
|| ||||
Sbjct: 123 agataaa 129
>gb|CB662000.1|CB662000 OSJNEd05J09.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05J09 5', mRNA sequence
Length = 772
Score = 289 bits (146), Expect = 1e-075
Identities = 266/306 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 467 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 526
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 527 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 586
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 587 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 646
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 647 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 706
Query: 559 gtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacg 618
|||||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |
Sbjct: 707 gtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatg 766
Query: 619 atgatg 624
||||||
Sbjct: 767 atgatg 772
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 329 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 388
Query: 247 agttaaa 253
|| ||||
Sbjct: 389 agataaa 395
>gb|CF322458.1|CF322458 HDN--01-B20.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--01-B20, mRNA sequence
Length = 468
Score = 274 bits (138), Expect = 7e-071
Identities = 265/306 (86%), Gaps = 1/306 (0%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 163 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 222
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 223 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 282
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 283 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 342
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 343 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 402
Query: 559 gtatcaattgcggtgtttgcat-ggggaaatacttctgtggtttgtgcaaactcttcgac 617
|||||| ||| ||||| ||||| |||||| |||||||||| ||||||| ||||| ||
Sbjct: 403 gtatcagttgtggtgtatgcatgggggaagtacttctgtgaagtgtgcaagctctttgat 462
Query: 618 gatgat 623
||||||
Sbjct: 463 gatgat 468
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 25 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 84
Query: 247 agttaaa 253
|| ||||
Sbjct: 85 agataaa 91
>gb|CB665389.1|CB665389 OSJNEd11M06.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11M06 5', mRNA sequence
Length = 815
Score = 262 bits (132), Expect = 3e-067
Identities = 252/292 (86%)
Strand = Plus / Plus
Query: 501 gaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatgt 560
||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||||
Sbjct: 1 gaagtgcagcaggttctatgctcgttgtgtggcacggaacaagaggtacggcaagtatgt 60
Query: 561 atcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactcttcgacgat 620
|||| ||| ||||| ||||||||||| |||||||||| ||||||| ||||| || |||
Sbjct: 61 atcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgat 120
Query: 621 gatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggagggagg 680
||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || | |
Sbjct: 121 gatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaag 180
Query: 681 gagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagt 740
||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |||
Sbjct: 181 gagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagt 240
Query: 741 catgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 241 catgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 292
>gb|CB650078.1|CB650078 OSJNEb14F12.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14F12 5', mRNA sequence
Length = 807
Score = 256 bits (129), Expect = 2e-065
Identities = 231/265 (87%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 543 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 602
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 603 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 662
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 663 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 722
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| || || || |||||||
Sbjct: 723 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagatgtacggcaagtat 782
Query: 559 gtatcaattgcggtgtttgcatggg 583
|||||| ||| ||||| ||||||||
Sbjct: 783 gtatcagttgtggtgtatgcatggg 807
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 405 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 464
Query: 247 agttaaa 253
|| ||||
Sbjct: 465 agataaa 471
>gb|CB672595.1|CB672595 OSJNEe06L08.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06L08 5', mRNA sequence
Length = 813
Score = 248 bits (125), Expect = 4e-063
Identities = 215/245 (87%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 569 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 628
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 629 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 688
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 689 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 748
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtat 558
||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct: 749 atgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtat 808
Query: 559 gtatc 563
|||||
Sbjct: 809 gtatc 813
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 431 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 490
Query: 247 agttaaa 253
|| ||||
Sbjct: 491 agataaa 497
>gb|CF317867.1|CF317867 HD--07-L11.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-L11, mRNA sequence
Length = 518
Score = 248 bits (125), Expect = 4e-063
Identities = 227/261 (86%)
Strand = Plus / Plus
Query: 320 ccctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattatag 379
||||||||| ||||||||| ||||| ||||||||||||| ||||||||| |||||||| |
Sbjct: 258 ccctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatcg 317
Query: 380 aaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcca 439
||| || |||||||| ||||||| || ||||| || ||||||||||| || || |||||
Sbjct: 318 aagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcca 377
Query: 440 caatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcca 499
||||||||| |||||||| |||||||||||| |||||||||||||||| ||||||||
Sbjct: 378 caatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcca 437
Query: 500 tgaagtgcagcaggttgtatgctcattgtgtggcactgaacaggaggtgcgacaagtatg 559
||||||||||||| || ||||||| ||||||||||| ||||| ||||| || ||||||||
Sbjct: 438 tgaagtgcagcagattatatgctcgttgtgtggcacggaacaagaggtacggcaagtatg 497
Query: 560 tatcaattgcggtgtttgcat 580
||||| ||| ||||| |||||
Sbjct: 498 tatcagttgtggtgtatgcat 518
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 119 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 178
Query: 247 agttaaa 253
|| ||||
Sbjct: 179 agataaa 185
>gb|CF308291.1|CF308291 ABF--02-A24.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-A24, mRNA sequence
Length = 500
Score = 230 bits (116), Expect = 9e-058
Identities = 213/244 (87%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 257 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 316
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 317 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 376
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 377 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 436
Query: 499 atgaagtgcagcaggttgta-tgctcattgtgtggcactgaacaggaggtgcgacaagta 557
||||||||||||||||| || ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 437 atgaagtgcagcaggttatattgctcgttgtgtggcacggaacaagaggtacggcaagta 496
Query: 558 tgta 561
||||
Sbjct: 497 tgta 500
Score = 61.9 bits (31), Expect = 5e-007
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||||||||||||||||||| |
Sbjct: 119 tcaagatgggcgccatggacgtacaacttgagtctactgctgctcaacatggacaagcta 178
Query: 247 agttaaa 253
|| ||||
Sbjct: 179 agataaa 185
>gb|CF322996.1|CF322996 HDN--02-K08.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-K08, mRNA sequence
Length = 528
Score = 228 bits (115), Expect = 4e-057
Identities = 196/223 (87%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 306 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 365
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 366 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 425
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 426 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 485
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaaca 541
||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 486 atgaagtgcagcaggttatatgctcgttgtgtggcacggaaca 528
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 168 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 227
Query: 247 agttaaa 253
|| ||||
Sbjct: 228 agataaa 234
>gb|CB672285.1|CB672285 OSJNEe06D23.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06D23 5', mRNA sequence
Length = 762
Score = 220 bits (111), Expect = 9e-055
Identities = 195/223 (87%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 540 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 599
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 600 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 659
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 660 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 719
Query: 499 atgaagtgcagcaggttgtatgctcattgtgtggcactgaaca 541
||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 720 atgaagtgcagcaagttatatgctcgttgtgtggcacggaaca 762
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 402 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 461
Query: 247 agttaaa 253
|| ||||
Sbjct: 462 agataaa 468
>gb|CF323458.1|CF323458 HDN--03-O12.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-O12, mRNA sequence
Length = 518
Score = 216 bits (109), Expect = 1e-053
Identities = 196/224 (87%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgca-ctatgggtgtccacattat 377
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 293 accctgatgattatgagaaacttgaggaagggataatgcagntatgggtgtgcacattat 352
Query: 378 agaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgc 437
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || |||
Sbjct: 353 cgaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgc 412
Query: 438 cacaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgc 497
||||||||||| |||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 413 cacaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgc 472
Query: 498 catgaagtgcagcaggttgtatgctcattgtgtggcactgaaca 541
|||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 473 catgaagtgcagcaggttatatgctcgttgtgtggcacggaaca 516
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 155 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 214
Query: 247 agttaaa 253
|| ||||
Sbjct: 215 agataaa 221
>gb|CB665206.1|CB665206 OSJNEd11G24.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11G24 5', mRNA sequence
Length = 837
Score = 206 bits (104), Expect = 1e-050
Identities = 179/204 (87%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 634 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 693
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 694 gaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 753
Query: 439 acaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgcc 498
|||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 754 acaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgcc 813
Query: 499 atgaagtgcagcaggttgtatgct 522
||||||||||||||||| ||||||
Sbjct: 814 atgaagtgcagcaggttatatgct 837
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 496 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 555
Query: 247 agttaaa 253
|| ||||
Sbjct: 556 agataaa 562
>gb|AU075486.1|AU075486 AU075486 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60770_3A, mRNA sequence
Length = 216
Score = 198 bits (100), Expect = 3e-048
Identities = 185/212 (87%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 324 gatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattatagaagg 383
||||| ||||||||| ||||| ||||||||||||| ||||||||| | |||||| ||||
Sbjct: 3 gatgattatgagaaacttgaggaagggataatgcagtatgggtgtgc-cattatcgaaga 61
Query: 384 agatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgccacaat 443
|| |||||||| ||||||| || ||||| || ||||||||||| || || |||||||||
Sbjct: 62 aggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgccacaat 121
Query: 444 gaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaa 503
||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 122 gaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaa 181
Query: 504 gtgcagcaggttgtatgctcattgtgtggcac 535
|||||||||||| ||||||| |||||||||||
Sbjct: 182 gtgcagcaggttatatgctcgttgtgtggcac 213
>gb|CF323140.1|CF323140 HDN--03-A13.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-A13, mRNA sequence
Length = 542
Score = 198 bits (100), Expect = 3e-048
Identities = 207/240 (86%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatggg-tgtccacattat 377
|||||||||| ||||||||| ||||| ||||||||||||| |||||| ||| ||||||||
Sbjct: 303 accctgatgattatgagaaacttgaggaagggataatgcagtatggggtgtgcacattat 362
Query: 378 agaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgc 437
|||| || |||||||| ||||||| || ||||| || ||||||||||| || || |||
Sbjct: 363 cgaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgc 422
Query: 438 cacaatgaaactaagaattccattaaaattgataaaatgaagaggcatgaacttccacgc 497
||||||||||| |||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 423 cacaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgc 482
Query: 498 catgaagtgcagcaggtt-gtatgctcattgtgtggcactgaacaggaggtgcgacaagt 556
||||||| |||||||||| ||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 483 catgaagggcagcaggttattatgctcgttgtgtggcacggaacaagaggtacggcaagt 542
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 165 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 224
Query: 247 agttaaa 253
|| ||||
Sbjct: 225 agataaa 231
>gb|CF310830.1|CF310830 ABF--05-L11.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-L11, mRNA sequence
Length = 698
Score = 151 bits (76), Expect = 7e-034
Identities = 148/172 (86%)
Strand = Plus / Plus
Query: 621 gatgtctctaaacagcagtatcactgcaacggatgtggaatatgtagaatcggagggagg 680
||||| || |||||||| ||||| ||||| || ||||||||||| ||||| || || | |
Sbjct: 2 gatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaag 61
Query: 681 gagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagt 740
||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |||
Sbjct: 62 gagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagt 121
Query: 741 catgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 122 catgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 173
>gb|C96813.1|C96813 C96813 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11207_2A, mRNA sequence
Length = 433
Score = 143 bits (72), Expect = 2e-031
Identities = 140/163 (85%)
Strand = Plus / Plus
Query: 630 aaacagcagtatcactgcaacggatgtggaatatgtagaatcggagggagggagaatttc 689
|||||||| ||||| ||||| || ||||||||||| ||||| || || | ||||||||||
Sbjct: 8 aaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggagaatttc 67
Query: 690 ttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagtcatgcatgt 749
|| ||||| |||||||| ||||| || ||||| || | |||||| ||||||||||||
Sbjct: 68 tttcactgctcaaaatgcggatgctgttattctatagtattgaagancagtcatgcatgt 127
Query: 750 gttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 128 gttgaaggagcgatgcatcatgactgtccaatctgctttgagt 170
>gb|CB636892.1|CB636892 OSJNEa02N23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02N23 5', mRNA sequence
Length = 653
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggtgtccacattata 378
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 499 accctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatc 558
Query: 379 gaaggagatgccgcataagagctccttgctgcaatgaaatttttgattgccgacactgcc 438
|||| | |||||||| ||||||| || ||||| || ||||||||||| || || ||||
Sbjct: 559 gaagaaagtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgcc 618
Query: 439 acaatgaaactaagaattccattaaaattgat 470
|||||||||| |||||||| ||||||||||||
Sbjct: 619 acaatgaaacaaagaattcaattaaaattgat 650
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 361 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 420
Query: 247 agttaaa 253
|| ||||
Sbjct: 421 agataaa 427
>gb|CB663092.1|CB663092 OSJNEd07L03.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07L03 5', mRNA sequence
Length = 834
Score = 127 bits (64), Expect = 1e-026
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 657 ggaatatgtagaatcggagggagggagaatttcttccactgttcaaaatgtggatgttgc 716
|||||||| ||||| || || | |||||||||||| ||||| |||||||| ||||| ||
Sbjct: 1 ggaatatgcagaattggtggcaaggagaatttctttcactgctcaaaatgcggatgctgt 60
Query: 717 tattcaattgcgctgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgt 776
||||| || | ||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 tattctatagtattgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgt 120
Query: 777 ccaatctgcttcgagt 792
||||||||||| ||||
Sbjct: 121 ccaatctgctttgagt 136
>gb|C72284.1|C72284 C72284 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1361_1A, mRNA sequence
Length = 461
Score = 121 bits (61), Expect = 6e-025
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 680 ggagaatttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatag 739
|||||||||||| ||||| |||||||| ||||| || ||||| || | ||||||| ||
Sbjct: 8 ggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaacag 67
Query: 740 tcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 68 tcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 120
>gb|AACV01002243.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002243, whole
genome shotgun sequence
Length = 46304
Score = 113 bits (57), Expect = 1e-022
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 451 agaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagc 510
||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 41637 agaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagc 41578
Query: 511 aggttgtatgctcattgtgtggcactgaacaggaggt 547
||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 41577 aggttatatgctcgttgtgtggcacggaacaagaggt 41541
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgctt 787
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 40650 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctt 40593
Score = 67.9 bits (34), Expect = 8e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 552 caagtatgtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactc 611
||||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||
Sbjct: 41446 caagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctc 41387
Query: 612 ttcgacgatgatgt 625
|| || ||||||||
Sbjct: 41386 tttgatgatgatgt 41373
Score = 65.9 bits (33), Expect = 3e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 364 ggtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttg 423
||||| |||||||| |||| || |||||||| ||||||| || ||||| || |||||||
Sbjct: 42404 ggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttg 42345
Query: 424 attgccgacactgccacaatgaaac 448
|||| || || ||||||||||||||
Sbjct: 42344 attgtcggcattgccacaatgaaac 42320
Score = 63.9 bits (32), Expect = 1e-007
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggt 366
|||||||||| ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 42536 accctgatgattatgagaaacttgaggaagggataatgcagtatgggt 42489
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 42674 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 42615
Query: 247 agttaaa 253
|| ||||
Sbjct: 42614 agataaa 42608
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 113 bits (57), Expect = 1e-022
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 451 agaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagc 510
||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 30041639 agaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagc 30041580
Query: 511 aggttgtatgctcattgtgtggcactgaacaggaggt 547
||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 30041579 aggttatatgctcgttgtgtggcacggaacaagaggt 30041543
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgctt 787
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 30040652 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctt 30040595
Score = 67.9 bits (34), Expect = 8e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 552 caagtatgtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactc 611
||||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||
Sbjct: 30041448 caagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctc 30041389
Query: 612 ttcgacgatgatgt 625
|| || ||||||||
Sbjct: 30041388 tttgatgatgatgt 30041375
Score = 65.9 bits (33), Expect = 3e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 364 ggtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttg 423
||||| |||||||| |||| || |||||||| ||||||| || ||||| || |||||||
Sbjct: 30042405 ggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttg 30042346
Query: 424 attgccgacactgccacaatgaaac 448
|||| || || ||||||||||||||
Sbjct: 30042345 attgtcggcattgccacaatgaaac 30042321
Score = 63.9 bits (32), Expect = 1e-007
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggt 366
|||||||||| ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 30042537 accctgatgattatgagaaacttgaggaagggataatgcagtatgggt 30042490
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 30042675 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 30042616
Query: 247 agttaaa 253
|| ||||
Sbjct: 30042615 agataaa 30042609
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 113 bits (57), Expect = 1e-022
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 451 agaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagc 510
||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 4489022 agaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagc 4488963
Query: 511 aggttgtatgctcattgtgtggcactgaacaggaggt 547
||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 4488962 aggttatatgctcgttgtgtggcacggaacaagaggt 4488926
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgctt 787
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4488035 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctt 4487978
Score = 67.9 bits (34), Expect = 8e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 552 caagtatgtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactc 611
||||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||
Sbjct: 4488831 caagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctc 4488772
Query: 612 ttcgacgatgatgt 625
|| || ||||||||
Sbjct: 4488771 tttgatgatgatgt 4488758
Score = 65.9 bits (33), Expect = 3e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 364 ggtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttg 423
||||| |||||||| |||| || |||||||| ||||||| || ||||| || |||||||
Sbjct: 4489788 ggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttg 4489729
Query: 424 attgccgacactgccacaatgaaac 448
|||| || || ||||||||||||||
Sbjct: 4489728 attgtcggcattgccacaatgaaac 4489704
Score = 63.9 bits (32), Expect = 1e-007
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggt 366
|||||||||| ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 4489920 accctgatgattatgagaaacttgaggaagggataatgcagtatgggt 4489873
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 4490058 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 4489999
Query: 247 agttaaa 253
|| ||||
Sbjct: 4489998 agataaa 4489992
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0480C01
Length = 151100
Score = 113 bits (57), Expect = 1e-022
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 451 agaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagc 510
||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 105527 agaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagc 105468
Query: 511 aggttgtatgctcattgtgtggcactgaacaggaggt 547
||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 105467 aggttatatgctcgttgtgtggcacggaacaagaggt 105431
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgctt 787
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 104540 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctt 104483
Score = 67.9 bits (34), Expect = 8e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 552 caagtatgtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactc 611
||||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||
Sbjct: 105336 caagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctc 105277
Query: 612 ttcgacgatgatgt 625
|| || ||||||||
Sbjct: 105276 tttgatgatgatgt 105263
Score = 65.9 bits (33), Expect = 3e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 364 ggtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttg 423
||||| |||||||| |||| || |||||||| ||||||| || ||||| || |||||||
Sbjct: 106293 ggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttg 106234
Query: 424 attgccgacactgccacaatgaaac 448
|||| || || ||||||||||||||
Sbjct: 106233 attgtcggcattgccacaatgaaac 106209
Score = 63.9 bits (32), Expect = 1e-007
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggt 366
|||||||||| ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 106425 accctgatgattatgagaaacttgaggaagggataatgcagtatgggt 106378
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 106563 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 106504
Query: 247 agttaaa 253
|| ||||
Sbjct: 106503 agataaa 106497
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 113 bits (57), Expect = 1e-022
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 451 agaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagc 510
||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 4423209 agaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagc 4423150
Query: 511 aggttgtatgctcattgtgtggcactgaacaggaggt 547
||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 4423149 aggttatatgctcgttgtgtggcacggaacaagaggt 4423113
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgctt 787
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4422222 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctt 4422165
Score = 67.9 bits (34), Expect = 8e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 552 caagtatgtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactc 611
||||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||
Sbjct: 4423018 caagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctc 4422959
Query: 612 ttcgacgatgatgt 625
|| || ||||||||
Sbjct: 4422958 tttgatgatgatgt 4422945
Score = 65.9 bits (33), Expect = 3e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 364 ggtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttg 423
||||| |||||||| |||| || |||||||| ||||||| || ||||| || |||||||
Sbjct: 4423976 ggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttg 4423917
Query: 424 attgccgacactgccacaatgaaac 448
|||| || || ||||||||||||||
Sbjct: 4423916 attgtcggcattgccacaatgaaac 4423892
Score = 63.9 bits (32), Expect = 1e-007
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggt 366
|||||||||| ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 4424108 accctgatgattatgagaaacttgaggaagggataatgcagtatgggt 4424061
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 4424246 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 4424187
Query: 247 agttaaa 253
|| ||||
Sbjct: 4424186 agataaa 4424180
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 113 bits (57), Expect = 1e-022
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 451 agaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagc 510
||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 29624930 agaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagc 29624871
Query: 511 aggttgtatgctcattgtgtggcactgaacaggaggt 547
||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 29624870 aggttatatgctcgttgtgtggcacggaacaagaggt 29624834
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgctt 787
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 29623943 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctt 29623886
Score = 67.9 bits (34), Expect = 8e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 552 caagtatgtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactc 611
||||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||
Sbjct: 29624739 caagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctc 29624680
Query: 612 ttcgacgatgatgt 625
|| || ||||||||
Sbjct: 29624679 tttgatgatgatgt 29624666
Score = 65.9 bits (33), Expect = 3e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 364 ggtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttg 423
||||| |||||||| |||| || |||||||| ||||||| || ||||| || |||||||
Sbjct: 29625697 ggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttg 29625638
Query: 424 attgccgacactgccacaatgaaac 448
|||| || || ||||||||||||||
Sbjct: 29625637 attgtcggcattgccacaatgaaac 29625613
Score = 63.9 bits (32), Expect = 1e-007
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggt 366
|||||||||| ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 29625829 accctgatgattatgagaaacttgaggaagggataatgcagtatgggt 29625782
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 29625967 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 29625908
Query: 247 agttaaa 253
|| ||||
Sbjct: 29625907 agataaa 29625901
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 113 bits (57), Expect = 1e-022
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 451 agaattccattaaaattgataaaatgaagaggcatgaacttccacgccatgaagtgcagc 510
||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 29960969 agaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagc 29960910
Query: 511 aggttgtatgctcattgtgtggcactgaacaggaggt 547
||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 29960909 aggttatatgctcgttgtgtggcacggaacaagaggt 29960873
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgctt 787
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 29959982 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctt 29959925
Score = 67.9 bits (34), Expect = 8e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 552 caagtatgtatcaattgcggtgtttgcatggggaaatacttctgtggtttgtgcaaactc 611
||||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||
Sbjct: 29960778 caagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctc 29960719
Query: 612 ttcgacgatgatgt 625
|| || ||||||||
Sbjct: 29960718 tttgatgatgatgt 29960705
Score = 65.9 bits (33), Expect = 3e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 364 ggtgtccacattatagaaggagatgccgcataagagctccttgctgcaatgaaatttttg 423
||||| |||||||| |||| || |||||||| ||||||| || ||||| || |||||||
Sbjct: 29961735 ggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttg 29961676
Query: 424 attgccgacactgccacaatgaaac 448
|||| || || ||||||||||||||
Sbjct: 29961675 attgtcggcattgccacaatgaaac 29961651
Score = 63.9 bits (32), Expect = 1e-007
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 319 accctgatgactatgagaaatttgagaaagggataatgcactatgggt 366
|||||||||| ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 29961867 accctgatgattatgagaaacttgaggaagggataatgcagtatgggt 29961820
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 187 tcaagatgggcgccttggacctacaccttgactttgcttctgctcaacatggacaagcca 246
|||||||||||||| ||||| |||| ||||| | | || ||| ||||||||||||||| |
Sbjct: 29962005 tcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagcta 29961946
Query: 247 agttaaa 253
|| ||||
Sbjct: 29961945 agataaa 29961939
>gb|CF322768.1|CF322768 HDN--02-A06.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-A06, mRNA sequence
Length = 539
Score = 111 bits (56), Expect = 6e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 685 atttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagtcatg 744
||||||| ||||| |||||||| ||||| || ||||| || | ||||||| |||||||
Sbjct: 18 atttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagtcatg 77
Query: 745 catgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 78 catgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 125
>gb|CF321633.1|CF321633 HD--12-P07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-P07, mRNA sequence
Length = 612
Score = 109 bits (55), Expect = 2e-021
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 686 tttcttccactgttcaaaatgtggatgttgctattcaattgcgctgaagaatagtcatgc 745
|||||| ||||| |||||||| ||||| || ||||| || | ||||||| ||||||||
Sbjct: 1 tttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagtcatgc 60
Query: 746 atgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 61 atgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 107
>gb|CF311216.1|CF311216 ABF--06-F17.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-F17, mRNA sequence
Length = 606
Score = 101 bits (51), Expect = 6e-019
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 730 tgaagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcg 789
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 18 tgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttg 77
Query: 790 agt 792
|||
Sbjct: 78 agt 80
>gb|CB675652.1|CB675652 OSJNEe11I08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11I08 3', mRNA sequence
Length = 815
Score = 97.6 bits (49), Expect = 9e-018
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 732 aagaatagtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgag 791
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 779 aagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgag 720
Query: 792 t 792
|
Sbjct: 719 t 719
>gb|CB674460.1|CB674460 OSJNEe09I08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09I08 3', mRNA sequence
Length = 762
Score = 93.7 bits (47), Expect = 1e-016
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 738 agtcatgcatgtgttgaaggggcgatgcatcatgactgtccaatctgcttcgagt 792
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 761 agtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagt 707
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,194,776
Number of Sequences: 438736
Number of extensions: 1194776
Number of successful extensions: 6947
Number of sequences better than 0.5: 68
Number of HSP's better than 0.5 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6641
Number of HSP's gapped (non-prelim): 239
length of query: 792
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 771
effective length of database: 2,791,206,460
effective search space: 2152020180660
effective search space used: 2152020180660
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)