BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3148257.2.1
         (675 letters)

Database: Oryza_nucl_with_EST.fasta 
           438,736 sequences; 2,800,419,916 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AACV01002367.1|  Oryza sativa (japonica cultivar-group) c...   387   e-105
dbj|BA000010.8|  Oryza sativa (japonica cultivar-group) geno...   387   e-105
ref|NT_079927.2|  Oryza sativa (japonica cultivar-group)          387   e-105
dbj|AP003249.3|  Oryza sativa (japonica cultivar-group) geno...   387   e-105
dbj|AP003268.4|  Oryza sativa (japonica cultivar-group) geno...   387   e-105
gb|CH401168.1|  Oryza sativa (japonica cultivar-group) chrom...   387   e-105
gb|CM000138.1|  Oryza sativa (japonica cultivar-group) chrom...   387   e-105
dbj|AP008207.1|  Oryza sativa (japonica cultivar-group) geno...   387   e-105
dbj|AK099782.1|  Oryza sativa (japonica cultivar-group) cDNA...   385   e-104
dbj|AK120195.1|  Oryza sativa (japonica cultivar-group) cDNA...   385   e-104
dbj|AK120402.1|  Oryza sativa (japonica cultivar-group) cDNA...   385   e-104
ref|NM_191270.1|  Oryza sativa (japonica cultivar-group),  p...   381   e-103
dbj|AK099834.1|  Oryza sativa (japonica cultivar-group) cDNA...   357   5e-096
gb|CV722452.1|CV722452  YTPSP--01-E18.b1 TPSP-overexpression...    44   0.097
gb|CD670847.1|CD670847  OsMR267 5MT resistant rice mutant cD...    42   0.38 
gb|CV722297.1|CV722297  YDARK--01-C09.g1 Etiolated rice leaf...    42   0.38 
>gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002367, whole
             genome shotgun sequence
          Length = 23038

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Plus

                                                                         
Query: 15    gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
             ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 12942 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 13001

                                                                         
Query: 75    atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
             || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 13002 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 13061

                                                                         
Query: 135   gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
             ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 13062 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 13121

                                                                         
Query: 195   caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
             ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 13122 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 13181

                                                                         
Query: 255   cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
             ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 13182 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 13241

                                                                         
Query: 315   ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
             ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 13242 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 13301

                                                                
Query: 375   ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
             |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 13302 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 13352

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 502   ggctttgtgcttactgatatagcttagatccatattgaac 541
             |||||| || ||||||||||||||||||||||||||||||
Sbjct: 14418 ggctttctgtttactgatatagcttagatccatattgaac 14457

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 631   gagctagttgtgtgtagctgattctattgcagca 664
             ||||||||||| ||||| ||||||| ||||||||
Sbjct: 14550 gagctagttgtatgtagatgattctgttgcagca 14583
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43342410

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Minus

                                                                            
Query: 15       gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
                ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 31717101 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 31717042

                                                                            
Query: 75       atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
                || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 31717041 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 31716982

                                                                            
Query: 135      gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
                ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 31716981 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 31716922

                                                                            
Query: 195      caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
                ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 31716921 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 31716862

                                                                            
Query: 255      cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
                ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 31716861 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 31716802

                                                                            
Query: 315      ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
                ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 31716801 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 31716742

                                                                   
Query: 375      ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
                |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 31716741 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 31716691

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 502      ggctttgtgcttactgatatagcttagatccatattgaac 541
                |||||| || ||||||||||||||||||||||||||||||
Sbjct: 31715625 ggctttctgtttactgatatagcttagatccatattgaac 31715586

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 631      gagctagttgtgtgtagctgattctattgcagca 664
                ||||||||||| ||||| ||||||| ||||||||
Sbjct: 31715493 gagctagttgtatgtagatgattctgttgcagca 31715460
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
          Length = 14818989

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Minus

                                                                           
Query: 15      gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
               ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 6164484 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 6164425

                                                                           
Query: 75      atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
               || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 6164424 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 6164365

                                                                           
Query: 135     gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
               ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 6164364 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 6164305

                                                                           
Query: 195     caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
               ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 6164304 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 6164245

                                                                           
Query: 255     cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
               ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 6164244 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 6164185

                                                                           
Query: 315     ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
               ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 6164184 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 6164125

                                                                  
Query: 375     ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
               |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 6164124 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 6164074

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                       
Query: 502     ggctttgtgcttactgatatagcttagatccatattgaac 541
               |||||| || ||||||||||||||||||||||||||||||
Sbjct: 6163008 ggctttctgtttactgatatagcttagatccatattgaac 6162969

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 631     gagctagttgtgtgtagctgattctattgcagca 664
               ||||||||||| ||||| ||||||| ||||||||
Sbjct: 6162876 gagctagttgtatgtagatgattctgttgcagca 6162843
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435B05
          Length = 150997

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Minus

                                                                          
Query: 15     gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
              ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 149454 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 149395

                                                                          
Query: 75     atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
              || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 149394 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 149335

                                                                          
Query: 135    gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
              ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 149334 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 149275

                                                                          
Query: 195    caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
              ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 149274 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 149215

                                                                          
Query: 255    cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
              ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 149214 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 149155

                                                                          
Query: 315    ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
              ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 149154 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 149095

                                                                 
Query: 375    ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
              |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 149094 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 149044

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                      
Query: 502    ggctttgtgcttactgatatagcttagatccatattgaac 541
              |||||| || ||||||||||||||||||||||||||||||
Sbjct: 147978 ggctttctgtttactgatatagcttagatccatattgaac 147939

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 631    gagctagttgtgtgtagctgattctattgcagca 664
              ||||||||||| ||||| ||||||| ||||||||
Sbjct: 147846 gagctagttgtatgtagatgattctgttgcagca 147813
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503C12
          Length = 147180

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Minus

                                                                         
Query: 15    gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
             ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 50163 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 50104

                                                                         
Query: 75    atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
             || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 50103 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 50044

                                                                         
Query: 135   gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
             ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 50043 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 49984

                                                                         
Query: 195   caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
             ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 49983 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 49924

                                                                         
Query: 255   cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
             ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 49923 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 49864

                                                                         
Query: 315   ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
             ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 49863 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 49804

                                                                
Query: 375   ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
             |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 49803 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 49753

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 502   ggctttgtgcttactgatatagcttagatccatattgaac 541
             |||||| || ||||||||||||||||||||||||||||||
Sbjct: 48687 ggctttctgtttactgatatagcttagatccatattgaac 48648

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 631   gagctagttgtgtgtagctgattctattgcagca 664
             ||||||||||| ||||| ||||||| ||||||||
Sbjct: 48555 gagctagttgtatgtagatgattctgttgcagca 48522
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
               scaffold, whole genome shotgun sequence
          Length = 17394610

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Minus

                                                                           
Query: 15      gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
               ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 6067127 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 6067068

                                                                           
Query: 75      atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
               || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 6067067 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 6067008

                                                                           
Query: 135     gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
               ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 6067007 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 6066948

                                                                           
Query: 195     caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
               ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 6066947 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 6066888

                                                                           
Query: 255     cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
               ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 6066887 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 6066828

                                                                           
Query: 315     ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
               ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 6066827 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 6066768

                                                                  
Query: 375     ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
               |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 6066767 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 6066717

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                       
Query: 502     ggctttgtgcttactgatatagcttagatccatattgaac 541
               |||||| || ||||||||||||||||||||||||||||||
Sbjct: 6065651 ggctttctgtttactgatatagcttagatccatattgaac 6065612

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 631     gagctagttgtgtgtagctgattctattgcagca 664
               ||||||||||| ||||| ||||||| ||||||||
Sbjct: 6065519 gagctagttgtatgtagatgattctgttgcagca 6065486
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
                sequence
          Length = 42596331

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Minus

                                                                            
Query: 15       gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
                ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 31268848 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 31268789

                                                                            
Query: 75       atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
                || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 31268788 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 31268729

                                                                            
Query: 135      gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
                ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 31268728 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 31268669

                                                                            
Query: 195      caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
                ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 31268668 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 31268609

                                                                            
Query: 255      cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
                ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 31268608 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 31268549

                                                                            
Query: 315      ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
                ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 31268548 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 31268489

                                                                   
Query: 375      ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
                |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 31268488 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 31268438

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 502      ggctttgtgcttactgatatagcttagatccatattgaac 541
                |||||| || ||||||||||||||||||||||||||||||
Sbjct: 31267372 ggctttctgtttactgatatagcttagatccatattgaac 31267333

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 631      gagctagttgtgtgtagctgattctattgcagca 664
                ||||||||||| ||||| ||||||| ||||||||
Sbjct: 31267240 gagctagttgtatgtagatgattctgttgcagca 31267207
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  387 bits (195), Expect = e-105
 Identities = 357/411 (86%)
 Strand = Plus / Minus

                                                                            
Query: 15       gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
                ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 31636431 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 31636372

                                                                            
Query: 75       atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
                || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 31636371 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 31636312

                                                                            
Query: 135      gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
                ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 31636311 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 31636252

                                                                            
Query: 195      caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
                ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 31636251 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 31636192

                                                                            
Query: 255      cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
                ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 31636191 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 31636132

                                                                            
Query: 315      ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
                ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 31636131 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 31636072

                                                                   
Query: 375      ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgaggt 425
                |||||||||||||| |||||| |||| || | ||||| | |||||||||||
Sbjct: 31636071 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggt 31636021

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 502      ggctttgtgcttactgatatagcttagatccatattgaac 541
                |||||| || ||||||||||||||||||||||||||||||
Sbjct: 31634955 ggctttctgtttactgatatagcttagatccatattgaac 31634916

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 631      gagctagttgtgtgtagctgattctattgcagca 664
                ||||||||||| ||||| ||||||| ||||||||
Sbjct: 31634823 gagctagttgtatgtagatgattctgttgcagca 31634790
>dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O05, full
            insert sequence
          Length = 5774

 Score =  385 bits (194), Expect = e-104
 Identities = 356/410 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
            ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 5101 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 5160

                                                                        
Query: 75   atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
            || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 5161 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 5220

                                                                        
Query: 135  gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
            ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 5221 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 5280

                                                                        
Query: 195  caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
            ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 5281 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 5340

                                                                        
Query: 255  cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
            ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 5341 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 5400

                                                                        
Query: 315  ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
            ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 5401 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 5460

                                                              
Query: 375  ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgagg 424
            |||||||||||||| |||||| |||| || | ||||| | ||||||||||
Sbjct: 5461 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgagg 5510

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 502  ggctttgtgcttactgatatagcttagatccatattgaac 541
            |||||| || ||||||||||||||||||||||||||||||
Sbjct: 5579 ggctttctgtttactgatatagcttagatccatattgaac 5618

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 631  gagctagttgtgtgtagctgattctattgcagca 664
            ||||||||||| ||||| ||||||| ||||||||
Sbjct: 5711 gagctagttgtatgtagatgattctgttgcagca 5744
>dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036H01, full
            insert sequence
          Length = 5949

 Score =  385 bits (194), Expect = e-104
 Identities = 356/410 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
            ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 5005 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 5064

                                                                        
Query: 75   atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
            || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 5065 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 5124

                                                                        
Query: 135  gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
            ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 5125 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 5184

                                                                        
Query: 195  caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
            ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 5185 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 5244

                                                                        
Query: 255  cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
            ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 5245 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 5304

                                                                        
Query: 315  ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
            ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 5305 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 5364

                                                              
Query: 375  ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgagg 424
            |||||||||||||| |||||| |||| || | ||||| | ||||||||||
Sbjct: 5365 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgagg 5414

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 502  ggctttgtgcttactgatatagcttagatccatattgaac 541
            |||||| || ||||||||||||||||||||||||||||||
Sbjct: 5483 ggctttctgtttactgatatagcttagatccatattgaac 5522

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 631  gagctagttgtgtgtagctgattctattgcagca 664
            ||||||||||| ||||| ||||||| ||||||||
Sbjct: 5615 gagctagttgtatgtagatgattctgttgcagca 5648
>dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I17, full
            insert sequence
          Length = 5396

 Score =  385 bits (194), Expect = e-104
 Identities = 356/410 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
            ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 4690 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 4749

                                                                        
Query: 75   atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
            || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 4750 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 4809

                                                                        
Query: 135  gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
            ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 4810 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 4869

                                                                        
Query: 195  caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
            ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 4870 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 4929

                                                                        
Query: 255  cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
            ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 4930 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 4989

                                                                        
Query: 315  ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
            ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 4990 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 5049

                                                              
Query: 375  ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgagg 424
            |||||||||||||| |||||| |||| || | ||||| | ||||||||||
Sbjct: 5050 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgagg 5099

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 502  ggctttgtgcttactgatatagcttagatccatattgaac 541
            |||||| || ||||||||||||||||||||||||||||||
Sbjct: 5168 ggctttctgtttactgatatagcttagatccatattgaac 5207

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 631  gagctagttgtgtgtagctgattctattgcagca 664
            ||||||||||| ||||| ||||||| ||||||||
Sbjct: 5300 gagctagttgtatgtagatgattctgttgcagca 5333
>ref|NM_191270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5373

 Score =  381 bits (192), Expect = e-103
 Identities = 354/408 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
            ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 4966 gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 5025

                                                                        
Query: 75   atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
            || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 5026 attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 5085

                                                                        
Query: 135  gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
            ||||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 5086 gacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgct 5145

                                                                        
Query: 195  caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
            ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 5146 caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 5205

                                                                        
Query: 255  cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
            ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 5206 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 5265

                                                                        
Query: 315  ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
            ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 5266 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 5325

                                                            
Query: 375  ctccagatatcccgtattcttactgggaaaagaacaaatacagtttga 422
            |||||||||||||| |||||| |||| || | ||||| | ||||||||
Sbjct: 5326 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttga 5373
>dbj|AK099834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106H04, full
            insert sequence
          Length = 1501

 Score =  357 bits (180), Expect = 5e-096
 Identities = 353/410 (86%), Gaps = 3/410 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74
            ||||||||||||||||| ||||| || |||||||||||||||||  | ||| ||| ||||
Sbjct: 798  gctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtc 857

                                                                        
Query: 75   atcactcttgtagtgctagtgctggttttgtttctgaagttcacggaatttcaaatcatt 134
            || | ||||| ||||||||||||| |  | |||||||| || ||  ||||||||||||||
Sbjct: 858  attattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcatt 917

                                                                        
Query: 135  gacatcttcactagtcttttggcatttattcctactggttggggcttgatttcgatcgct 194
            ||||||||||| || ||||||||||| ||||||   ||||||||||||||||| || |||
Sbjct: 918  gacatcttcacaagccttttggcattcattcct---ggttggggcttgatttccattgct 974

                                                                        
Query: 195  caagtaattcggccattcatcgaatccactgtggtctgggacagtattatttctgtggct 254
            ||||| ||| | |||||||| || || ||||||||||||| |||| || |||||||||| 
Sbjct: 975  caagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggca 1034

                                                                        
Query: 255  cgtttgtatgagatactgcttggagtgttcattatggcaccagttgcattgctgtcctgg 314
            ||||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||||
Sbjct: 1035 cgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctgg 1094

                                                                        
Query: 315  ttgccgggatttcaagaaatgcagacaagggtacttttcaatgaaggttttagcaggggc 374
            ||||| |||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 1095 ttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggc 1154

                                                              
Query: 375  ctccagatatcccgtattcttactgggaaaagaacaaatacagtttgagg 424
            |||||||||||||| |||||| |||| || | ||||| | ||||||||||
Sbjct: 1155 ctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgagg 1204

 Score = 63.9 bits (32), Expect = 1e-007
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 502  ggctttgtgcttactgatatagcttagatccatattgaac 541
            |||||| || ||||||||||||||||||||||||||||||
Sbjct: 1273 ggctttctgtttactgatatagcttagatccatattgaac 1312

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 631  gagctagttgtgtgtagctgattctattgcagca 664
            ||||||||||| ||||| ||||||| ||||||||
Sbjct: 1405 gagctagttgtatgtagatgattctgttgcagca 1438
>gb|CV722452.1|CV722452 YTPSP--01-E18.b1 TPSP-overexpression transgenic rice yeast two
          hybrid lambda phage cDNA library (YTPSP) Oryza sativa
          (japonica cultivar-group) cDNA clone YTPSP--01-E18,
          mRNA sequence
          Length = 292

 Score = 44.1 bits (22), Expect = 0.097
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  gaattcggcacgaggctcgagacaag 26
          ||||||||||||||| ||||||||||
Sbjct: 7  gaattcggcacgaggatcgagacaag 32
>gb|CD670847.1|CD670847 OsMR267 5MT resistant rice mutant cDNA library Oryza sativa
          (japonica cultivar-group) cDNA, mRNA sequence
          Length = 633

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  gaattcggcacgaggctcgag 21
          |||||||||||||||||||||
Sbjct: 39 gaattcggcacgaggctcgag 59
>gb|CV722297.1|CV722297 YDARK--01-C09.g1 Etiolated rice leaf yeast two hybrid lambda
          phage cDNA library (YDARK) Oryza sativa (japonica
          cultivar-group) cDNA clone YDARK--01-C09, mRNA sequence
          Length = 488

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  gaattcggcacgaggctcgag 21
          |||||||||||||||||||||
Sbjct: 9  gaattcggcacgaggctcgag 29
  Database: Oryza_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:41 PM
  Number of letters in database: 2,800,419,916
  Number of sequences in database:  438,736
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 923,266
Number of Sequences: 438736
Number of extensions: 923266
Number of successful extensions: 7886
Number of sequences better than  0.5: 16
Number of HSP's better than  0.5 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7814
Number of HSP's gapped (non-prelim): 71
length of query: 675
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 654
effective length of database: 2,791,206,460
effective search space: 1825449024840
effective search space used: 1825449024840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)