BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3042304.2.1
(805 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB661724.1|CB661724 OSJNEd05A04.r OSJNEd Oryza sativa (j... 551 e-154
dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA... 551 e-154
dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-... 551 e-154
gb|CB646119.1|CB646119 OSJNEb08F06.r OSJNEb Oryza sativa (j... 436 e-120
gb|AC135929.2| Oryza sativa (japonica cultivar-group) chrom... 353 9e-095
gb|AACV01011960.1| Oryza sativa (japonica cultivar-group) c... 353 9e-095
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 353 9e-095
gb|CH401205.1| Oryza sativa (japonica cultivar-group) chrom... 353 9e-095
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 353 9e-095
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 353 9e-095
gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydr... 343 9e-092
dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA... 343 9e-092
dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA... 343 9e-092
dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-... 343 9e-092
gb|AU225848.1|AU225848 AU225848 Oryza sativa Koshihikari pi... 337 6e-090
gb|CF323550.1|CF323550 HDN--04-C09.g1 OsHDAC1-overexpressin... 319 1e-084
dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA... 319 1e-084
dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-... 319 1e-084
dbj|AK099614.1| Oryza sativa (japonica cultivar-group) cDNA... 313 8e-083
gb|CB653221.1|CB653221 OSJNEc04A21.r OSJNEc Oryza sativa (j... 291 3e-076
gb|CB674716.1|CB674716 OSJNEe09O17.r OSJNEe Oryza sativa (j... 289 1e-075
gb|CB666956.1|CB666956 OSJNEd14B05.r OSJNEd Oryza sativa (j... 274 7e-071
gb|CB654314.1|CB654314 OSJNEc06H06.r OSJNEc Oryza sativa (j... 256 2e-065
dbj|AP004343.2| Oryza sativa (japonica cultivar-group) geno... 256 2e-065
dbj|AP006268.4| Oryza sativa (japonica cultivar-group) geno... 256 2e-065
gb|AACV01017003.1| Oryza sativa (japonica cultivar-group) c... 256 2e-065
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 256 2e-065
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 256 2e-065
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 256 2e-065
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 256 2e-065
gb|CB646118.1|CB646118 OSJNEb08F06.f OSJNEb Oryza sativa (j... 238 4e-060
gb|CF311240.1|CF311240 ABF--06-G05.b1 ABF3-overexpressing t... 238 4e-060
gb|CB654313.1|CB654313 OSJNEc06H06.f OSJNEc Oryza sativa (j... 230 9e-058
gb|AU173448.1|AU173448 AU173448 Rice root Oryza sativa (jap... 222 2e-055
gb|CB685001.1|CB685001 OSJNEf15A20.r OSJNEf Oryza sativa (j... 214 6e-053
dbj|AP003535.2| Oryza sativa (japonica cultivar-group) geno... 214 6e-053
gb|AACV01000881.1| Oryza sativa (japonica cultivar-group) c... 214 6e-053
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 214 6e-053
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 214 6e-053
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 214 6e-053
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 214 6e-053
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 214 6e-053
gb|CF303741.1|CF303741 ABF1--03-B12.g1 ABF3-overexpressing ... 200 8e-049
gb|CB653220.1|CB653220 OSJNEc04A21.f OSJNEc Oryza sativa (j... 153 2e-034
gb|CB661723.1|CB661723 OSJNEd05A04.f OSJNEd Oryza sativa (j... 127 1e-026
gb|CF330800.1|CF330800 NACL--06-K19.b1 Rice callus plasmid ... 117 1e-023
gb|CA999040.1|CA999040 S234M_D01 Rice cold stress germinati... 115 4e-023
dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA... 90 2e-015
dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-... 90 2e-015
gb|AU173188.1|AU173188 AU173188 Rice root Oryza sativa (jap... 84 1e-013
gb|CB656571.1|CB656571 OSJNEc11B09.r OSJNEc Oryza sativa (j... 68 8e-009
gb|CF323882.1|CF323882 HDN--05-A09.g1 OsHDAC1-overexpressin... 68 8e-009
dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA... 68 8e-009
dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA... 68 8e-009
dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-... 68 8e-009
gb|AACV01002640.1| Oryza sativa (japonica cultivar-group) c... 68 8e-009
ref|NM_190499.1| Oryza sativa (japonica cultivar-group), p... 68 8e-009
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 68 8e-009
dbj|AP003271.3| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbar... 64 1e-007
gb|AACV01006352.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CX728359.1|CX728359 OSJNEf05A21.r OSJNEf Oryza sativa (j... 50 0.002
>gb|CB661724.1|CB661724 OSJNEd05A04.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A04 3', mRNA sequence
Length = 831
Score = 551 bits (278), Expect = e-154
Identities = 430/480 (89%), Gaps = 2/480 (0%)
Strand = Plus / Minus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgag-ttangatcgcacgtatcttcaaca 69
|||||||||| || ||||||| ||||||||||||| ||| |||||| |||||||||||||
Sbjct: 738 tgaccatggactatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaaca 679
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
|||||||||||||||||||||| || ||||||||||||||||| | | ||||||||||
Sbjct: 678 catatggccctcgcatgtgcatcgatgatggccgtgttgtcagcaactttgttgctcagg 619
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
| ||| ||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 618 ctttgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaat 559
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| ||||||||||| ||||| |||||| ||| |||||||| ||||| ||||| ||||
Sbjct: 558 atgtctctgatctggttgagggattgatgaggctcatggaaggtgagcacgtagggccat 499
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
| |||||||| ||||| || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 498 tcaacctgggtaaccctggtgagttcaccatgctggagctggccaaggttgtccaggaca 439
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||||||||| |||||| |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 438 ccatcgaccctaacgcaaagatcgagttccgtcccaacacccaggacgacccgcacaagc 379
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 378 gcaagcctgacatcggccgtgccaaggagctccttgggtgggagccaaagatccctctcc 319
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgaccaagaca 489
| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 318 acaagggtcttcccctcatggtcaccgacttccgcaagcgcattttcggtgaccaagaca 259
>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full
insert sequence
Length = 1734
Score = 551 bits (278), Expect = e-154
Identities = 430/480 (89%), Gaps = 2/480 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgag-ttangatcgcacgtatcttcaaca 69
|||||||||| || ||||||| ||||||||||||| ||| |||||| |||||||||||||
Sbjct: 987 tgaccatggactatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaaca 1046
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
|||||||||||||||||||||| || ||||||||||||||||| | | ||||||||||
Sbjct: 1047 catatggccctcgcatgtgcatcgatgatggccgtgttgtcagcaactttgttgctcagg 1106
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
| ||| ||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 1107 ctttgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaat 1166
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| ||||||||||| ||||| |||||| ||| |||||||| ||||| ||||| ||||
Sbjct: 1167 atgtctctgatctggttgagggattgatgaggctcatggaaggtgagcacgtagggccat 1226
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
| |||||||| ||||| || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1227 tcaacctgggtaaccctggtgagttcaccatgctggagctggccaaggttgtccaggaca 1286
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||||||||| |||||| |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 1287 ccatcgaccctaacgcaaagatcgagttccgtcccaacacccaggacgacccgcacaagc 1346
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1347 gcaagcctgacatcggccgtgccaaggagctccttgggtgggagccaaagatccctctcc 1406
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgaccaagaca 489
| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1407 acaagggtcttcccctcatggtcaccgacttccgcaagcgcattttcggtgaccaagaca 1466
>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1555
Score = 551 bits (278), Expect = e-154
Identities = 430/480 (89%), Gaps = 2/480 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgag-ttangatcgcacgtatcttcaaca 69
|||||||||| || ||||||| ||||||||||||| ||| |||||| |||||||||||||
Sbjct: 913 tgaccatggactatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaaca 972
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
|||||||||||||||||||||| || ||||||||||||||||| | | ||||||||||
Sbjct: 973 catatggccctcgcatgtgcatcgatgatggccgtgttgtcagcaactttgttgctcagg 1032
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
| ||| ||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 1033 ctttgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaat 1092
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| ||||||||||| ||||| |||||| ||| |||||||| ||||| ||||| ||||
Sbjct: 1093 atgtctctgatctggttgagggattgatgaggctcatggaaggtgagcacgtagggccat 1152
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
| |||||||| ||||| || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1153 tcaacctgggtaaccctggtgagttcaccatgctggagctggccaaggttgtccaggaca 1212
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||||||||| |||||| |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 1213 ccatcgaccctaacgcaaagatcgagttccgtcccaacacccaggacgacccgcacaagc 1272
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1273 gcaagcctgacatcggccgtgccaaggagctccttgggtgggagccaaagatccctctcc 1332
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgaccaagaca 489
| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1333 acaagggtcttcccctcatggtcaccgacttccgcaagcgcattttcggtgaccaagaca 1392
>gb|CB646119.1|CB646119 OSJNEb08F06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08F06 3', mRNA sequence
Length = 797
Score = 436 bits (220), Expect = e-120
Identities = 319/353 (90%)
Strand = Plus / Minus
Query: 137 gaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatgtttc 196
||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 797 gaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatgtctc 738
Query: 197 tgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccatttaacct 256
||||||||| ||||| |||||| ||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 737 tgatctggttgagggattgatgaggctcatggaaggtgagcacgtagggccattcaacct 678
Query: 257 gggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggacaccatcga 316
||| ||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 677 gggtaaccctggtgagttcaccatgctggagctggccaaggttgtccaggacaccatcga 618
Query: 317 ccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagcgcaagcc 376
||| |||||| |||||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 617 ccctaacgcaaagatcgagttccgtcccaacacccaggacgacccgcacaagcgcaagcc 558
Query: 377 cgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctccgcgaggg 436
||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 557 tgacatcggccgtgccaaggagctccttgggtgggagccaaagatccctctccacaaggg 498
Query: 437 ccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgaccaagaca 489
||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 497 tcttcccctcatggtcaccgacttccgcaagcgcattttcggtgaccaagaca 445
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
complete sequence
Length = 164064
Score = 353 bits (178), Expect = 9e-095
Identities = 251/276 (90%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
|||||| ||| |||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 144072 tgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagt 144013
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 144012 tcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcg 143953
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 143952 agttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgcca 143893
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||
Sbjct: 143892 aggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtca 143833
Query: 454 ccgacttccgcaagcgcatcttcggcgaccaagaca 489
||||||||||||||||||| ||||| ||||||||||
Sbjct: 143832 ccgacttccgcaagcgcattttcggtgaccaagaca 143797
Score = 105 bits (53), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 45 gttangatcgcacgtatcttcaacacatatggccctcgcatgtgcattgacgatggccgt 104
|||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 144519 gttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgt 144460
Query: 105 gttgtcag 112
||||||||
Sbjct: 144459 gttgtcag 144452
Score = 93.7 bits (47), Expect = 1e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 133 tgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatg 192
||| ||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 144334 tgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatg 144275
Query: 193 tttctgatctggt 205
| |||||||||||
Sbjct: 144274 tctctgatctggt 144262
>gb|AACV01011960.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011960, whole
genome shotgun sequence
Length = 33954
Score = 353 bits (178), Expect = 9e-095
Identities = 251/276 (90%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
|||||| ||| |||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 9897 tgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagt 9838
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 9837 tcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcg 9778
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 9777 agttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgcca 9718
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||
Sbjct: 9717 aggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtca 9658
Query: 454 ccgacttccgcaagcgcatcttcggcgaccaagaca 489
||||||||||||||||||| ||||| ||||||||||
Sbjct: 9657 ccgacttccgcaagcgcattttcggtgaccaagaca 9622
Score = 105 bits (53), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 45 gttangatcgcacgtatcttcaacacatatggccctcgcatgtgcattgacgatggccgt 104
|||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 10344 gttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgt 10285
Query: 105 gttgtcag 112
||||||||
Sbjct: 10284 gttgtcag 10277
Score = 93.7 bits (47), Expect = 1e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 133 tgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatg 192
||| ||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 10159 tgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatg 10100
Query: 193 tttctgatctggt 205
| |||||||||||
Sbjct: 10099 tctctgatctggt 10087
>ref|NT_107210.1| Oryza sativa (japonica cultivar-group)
Length = 1353368
Score = 353 bits (178), Expect = 9e-095
Identities = 251/276 (90%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
|||||| ||| |||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 193304 tgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagt 193245
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 193244 tcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcg 193185
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 193184 agttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgcca 193125
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||
Sbjct: 193124 aggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtca 193065
Query: 454 ccgacttccgcaagcgcatcttcggcgaccaagaca 489
||||||||||||||||||| ||||| ||||||||||
Sbjct: 193064 ccgacttccgcaagcgcattttcggtgaccaagaca 193029
Score = 105 bits (53), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 45 gttangatcgcacgtatcttcaacacatatggccctcgcatgtgcattgacgatggccgt 104
|||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 193751 gttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgt 193692
Query: 105 gttgtcag 112
||||||||
Sbjct: 193691 gttgtcag 193684
Score = 93.7 bits (47), Expect = 1e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 133 tgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatg 192
||| ||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 193566 tgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatg 193507
Query: 193 tttctgatctggt 205
| |||||||||||
Sbjct: 193506 tctctgatctggt 193494
>gb|CH401205.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000042 genomic
scaffold, whole genome shotgun sequence
Length = 2493951
Score = 353 bits (178), Expect = 9e-095
Identities = 251/276 (90%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
|||||| ||| |||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 2081627 tgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagt 2081568
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 2081567 tcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcg 2081508
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 2081507 agttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgcca 2081448
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||
Sbjct: 2081447 aggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtca 2081388
Query: 454 ccgacttccgcaagcgcatcttcggcgaccaagaca 489
||||||||||||||||||| ||||| ||||||||||
Sbjct: 2081387 ccgacttccgcaagcgcattttcggtgaccaagaca 2081352
Score = 105 bits (53), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 45 gttangatcgcacgtatcttcaacacatatggccctcgcatgtgcattgacgatggccgt 104
|||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 2082074 gttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgt 2082015
Query: 105 gttgtcag 112
||||||||
Sbjct: 2082014 gttgtcag 2082007
Score = 93.7 bits (47), Expect = 1e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 133 tgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatg 192
||| ||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 2081889 tgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatg 2081830
Query: 193 tttctgatctggt 205
| |||||||||||
Sbjct: 2081829 tctctgatctggt 2081817
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 353 bits (178), Expect = 9e-095
Identities = 251/276 (90%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
|||||| ||| |||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 16887889 tgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagt 16887830
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 16887829 tcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcg 16887770
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 16887769 agttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgcca 16887710
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||
Sbjct: 16887709 aggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtca 16887650
Query: 454 ccgacttccgcaagcgcatcttcggcgaccaagaca 489
||||||||||||||||||| ||||| ||||||||||
Sbjct: 16887649 ccgacttccgcaagcgcattttcggtgaccaagaca 16887614
Score = 105 bits (53), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 45 gttangatcgcacgtatcttcaacacatatggccctcgcatgtgcattgacgatggccgt 104
|||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 16888336 gttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgt 16888277
Query: 105 gttgtcag 112
||||||||
Sbjct: 16888276 gttgtcag 16888269
Score = 93.7 bits (47), Expect = 1e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 133 tgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatg 192
||| ||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 16888151 tgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatg 16888092
Query: 193 tttctgatctggt 205
| |||||||||||
Sbjct: 16888091 tctctgatctggt 16888079
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 353 bits (178), Expect = 9e-095
Identities = 251/276 (90%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
|||||| ||| |||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 17199937 tgatgaggctcatggaaggtgagcacgtagggccattcaacctgggtaaccctggtgagt 17199878
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||
Sbjct: 17199877 tcaccatgctggagctggccaaggttgtccaggacaccatcgaccctaacgcaaagatcg 17199818
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 17199817 agttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgcca 17199758
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||
Sbjct: 17199757 aggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtca 17199698
Query: 454 ccgacttccgcaagcgcatcttcggcgaccaagaca 489
||||||||||||||||||| ||||| ||||||||||
Sbjct: 17199697 ccgacttccgcaagcgcattttcggtgaccaagaca 17199662
Score = 105 bits (53), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 45 gttangatcgcacgtatcttcaacacatatggccctcgcatgtgcattgacgatggccgt 104
|||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 17200384 gttaggatcgctcgtatcttcaacacatatggccctcgcatgtgcatcgatgatggccgt 17200325
Query: 105 gttgtcag 112
||||||||
Sbjct: 17200324 gttgtcag 17200317
Score = 93.7 bits (47), Expect = 1e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 133 tgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatg 192
||| ||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 17200199 tgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatg 17200140
Query: 193 tttctgatctggt 205
| |||||||||||
Sbjct: 17200139 tctctgatctggt 17200127
>gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydratase-like protein mRNA,
partial cds
Length = 773
Score = 343 bits (173), Expect = 9e-092
Identities = 400/475 (84%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgagtt-angatcgcacgtatcttcaaca 69
||||||||||||||||||||| ||||||||||||| | | ||| || || || || ||||
Sbjct: 214 tgaccatggattaccaccgtggtgccaaccttgaggtgaggattgctcggatttttaaca 273
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
||||||| ||||||||||||||||| ||||||||||||||||| | | ||||||||||
Sbjct: 274 catatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcagg 333
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| || || ||||| || ||||||||||| ||||| || ||||| || ||||
Sbjct: 334 cactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctttcaat 393
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| |||||| |||| || || |||||| |||||||||| ||||| |||||||||
Sbjct: 394 atgtctctgatttggtggaagggttgatgagcttgatggaaggggagcacataggaccat 453
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
|||||||||| || || || |||||||||||||||||||| || || |||||||||||||
Sbjct: 454 ttaacctgggtaatccgggtgagttcaccatgctggagctggctaaggttgtccaggaca 513
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||| || || || || || || |||||||||| |||||| || || ||||||||||
Sbjct: 514 ccattgatccgaatgctcgcattgagttccgtccgaacactgcggatgatccacacaagc 573
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
||||||| |||||| |||||| || |||||||| || |||||||| ||| | ||||| |
Sbjct: 574 gcaagcctgacatcacccgtgcgaaagagctcctgggctgggagcccaaggttcccctgc 633
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 634 gtgagggccttcccctcatggttaccgacttccgcaaacgcatctttggcgacca 688
>dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G06, full
insert sequence
Length = 1057
Score = 343 bits (173), Expect = 9e-092
Identities = 400/475 (84%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgagtt-angatcgcacgtatcttcaaca 69
||||||||||||||||||||| ||||||||||||| | | ||| || || || || ||||
Sbjct: 219 tgaccatggattaccaccgtggtgccaaccttgaggtgaggattgctcggatttttaaca 278
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
||||||| ||||||||||||||||| ||||||||||||||||| | | ||||||||||
Sbjct: 279 catatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcagg 338
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| || || ||||| || ||||||||||| ||||| || ||||| || ||||
Sbjct: 339 cactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctttcaat 398
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| |||||| |||| || || |||||| |||||||||| ||||| |||||||||
Sbjct: 399 atgtctctgatttggtggaagggttgatgagcttgatggaaggggagcacataggaccat 458
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
|||||||||| || || || |||||||||||||||||||| || || |||||||||||||
Sbjct: 459 ttaacctgggtaatccgggtgagttcaccatgctggagctggctaaggttgtccaggaca 518
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||| || || || || || || |||||||||| |||||| || || ||||||||||
Sbjct: 519 ccattgatccgaatgctcgcattgagttccgtccgaacactgcggatgatccacacaagc 578
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
||||||| |||||| |||||| || |||||||| || |||||||| ||| | ||||| |
Sbjct: 579 gcaagcctgacatcacccgtgcgaaagagctcctgggctgggagcccaaggttcccctgc 638
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 639 gtgagggccttcccctcatggttaccgacttccgcaaacgcatctttggcgacca 693
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full
insert sequence
Length = 1820
Score = 343 bits (173), Expect = 9e-092
Identities = 400/475 (84%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgagtt-angatcgcacgtatcttcaaca 69
||||||||||||||||||||| ||||||||||||| | | ||| || || || || ||||
Sbjct: 944 tgaccatggattaccaccgtggtgccaaccttgaggtgaggattgctcggatttttaaca 1003
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
||||||| ||||||||||||||||| ||||||||||||||||| | | ||||||||||
Sbjct: 1004 catatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcagg 1063
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| || || ||||| || ||||||||||| ||||| || ||||| || ||||
Sbjct: 1064 cactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctttcaat 1123
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| |||||| |||| || || |||||| |||||||||| ||||| |||||||||
Sbjct: 1124 atgtctctgatttggtggaagggttgatgagcttgatggaaggggagcacataggaccat 1183
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
|||||||||| || || || |||||||||||||||||||| || || |||||||||||||
Sbjct: 1184 ttaacctgggtaatccgggtgagttcaccatgctggagctggctaaggttgtccaggaca 1243
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||| || || || || || || |||||||||| |||||| || || ||||||||||
Sbjct: 1244 ccattgatccgaatgctcgcattgagttccgtccgaacactgcggatgatccacacaagc 1303
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
||||||| |||||| |||||| || |||||||| || |||||||| ||| | ||||| |
Sbjct: 1304 gcaagcctgacatcacccgtgcgaaagagctcctgggctgggagcccaaggttcccctgc 1363
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 1364 gtgagggccttcccctcatggttaccgacttccgcaaacgcatctttggcgacca 1418
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1336
Score = 343 bits (173), Expect = 9e-092
Identities = 400/475 (84%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgagtt-angatcgcacgtatcttcaaca 69
||||||||||||||||||||| ||||||||||||| | | ||| || || || || ||||
Sbjct: 817 tgaccatggattaccaccgtggtgccaaccttgaggtgaggattgctcggatttttaaca 876
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
||||||| ||||||||||||||||| ||||||||||||||||| | | ||||||||||
Sbjct: 877 catatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcagg 936
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| || || ||||| || ||||||||||| ||||| || ||||| || ||||
Sbjct: 937 cactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctttcaat 996
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| |||||| |||| || || |||||| |||||||||| ||||| |||||||||
Sbjct: 997 atgtctctgatttggtggaagggttgatgagcttgatggaaggggagcacataggaccat 1056
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
|||||||||| || || || |||||||||||||||||||| || || |||||||||||||
Sbjct: 1057 ttaacctgggtaatccgggtgagttcaccatgctggagctggctaaggttgtccaggaca 1116
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||| || || || || || || |||||||||| |||||| || || ||||||||||
Sbjct: 1117 ccattgatccgaatgctcgcattgagttccgtccgaacactgcggatgatccacacaagc 1176
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
||||||| |||||| |||||| || |||||||| || |||||||| ||| | ||||| |
Sbjct: 1177 gcaagcctgacatcacccgtgcgaaagagctcctgggctgggagcccaaggttcccctgc 1236
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 1237 gtgagggccttcccctcatggttaccgacttccgcaaacgcatctttggcgacca 1291
>gb|AU225848.1|AU225848 AU225848 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0879, mRNA sequence
Length = 552
Score = 337 bits (170), Expect = 6e-090
Identities = 234/256 (91%)
Strand = Plus / Minus
Query: 234 gagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgctggagcttgcc 293
||||| ||||| ||||| |||||||| ||||| || |||||||||||||||||||| |||
Sbjct: 548 gagcacgtagggccattcaacctgggtaaccctggtgagttcaccatgctggagctggcc 489
Query: 294 aangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtcagaacacccan 353
|| ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 488 aaggttgtccaggacaccatcgaccctaacgcaaagatcgagttccgtcccaacacccag 429
Query: 354 gacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctccttgggtgggag 413
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 428 gacgacccgcacaagcgcaagcctgacatcggccgtgccaaggagctccttgggtgggag 369
Query: 414 ccaaagatccccctccgcgagggccttcccctcatggtcaccgacttccgcaagcgcatc 473
||||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||
Sbjct: 368 ccaaagatccctctccacaagggtcttcccctcatggtcaccgacttccgcaagcgcatt 309
Query: 474 ttcggcgaccaagaca 489
||||| ||||||||||
Sbjct: 308 ttcggtgaccaagaca 293
>gb|CF323550.1|CF323550 HDN--04-C09.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-C09, mRNA sequence
Length = 615
Score = 319 bits (161), Expect = 1e-084
Identities = 397/475 (83%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtgt-gccaaccttgagtt-angatcgcacgtatcttcaaca 69
|||||||||| |||||||||| |||||||| ||| | | ||| || || ||||||||||
Sbjct: 24 tgaccatggactaccaccgtggcgccaacctcgaggtgaggattgctcggatcttcaaca 83
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
| || ||||| || |||||||| ||||||||||| || ||||| | | || || ||||
Sbjct: 84 cctacggcccccgtatgtgcatcgacgatggccgggtcgtcagcaactttgtcgcccagg 143
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| ||||| |||||||| || || || || ||||| || ||||| ||||| |
Sbjct: 144 cactgaggaaggagcccttgacggtgtacggcgacggtaagcagacgaggagcttccagt 203
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
| || || |||||||| ||||| ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 204 acgtctccgatctggtggaggggttgatgaagctgatggaaggggagcacgtagggccat 263
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
| |||||||| ||||| || |||||||| ||||||||||||||||| || || |||||||
Sbjct: 264 tcaacctgggaaacccaggggagttcacaatgctggagcttgccaaggtggtgcaggaca 323
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||||||||| ||||| |||||||||||| | | ||||||| |||||||| |||||||
Sbjct: 324 ccatcgacccaaacgcgcggatcgagttcaggccgaacaccgccgacgacccgcacaagc 383
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
| ||||| |||||| |||| |||||||||||||| || |||||||| |||||||||||||
Sbjct: 384 ggaagccggacatcagccgcgccaaggagctcctcggctgggagcccaagatccccctcc 443
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
| ||||||| || ||||||||| ||||||||| | |||||||||||||||||
Sbjct: 444 acaagggcctcccgctcatggtccaggacttccgcgaccgcatcttcggcgacca 498
>dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138E11, full
insert sequence
Length = 2031
Score = 319 bits (161), Expect = 1e-084
Identities = 397/475 (83%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtgt-gccaaccttgagtt-angatcgcacgtatcttcaaca 69
|||||||||| |||||||||| |||||||| ||| | | ||| || || ||||||||||
Sbjct: 1203 tgaccatggactaccaccgtggcgccaacctcgaggtgaggattgctcggatcttcaaca 1262
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
| || ||||| || |||||||| ||||||||||| || ||||| | | || || ||||
Sbjct: 1263 cctacggcccccgtatgtgcatcgacgatggccgggtcgtcagcaactttgtcgcccagg 1322
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| ||||| |||||||| || || || || ||||| || ||||| ||||| |
Sbjct: 1323 cactgaggaaggagcccttgacggtgtacggcgacggtaagcagacgaggagcttccagt 1382
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
| || || |||||||| ||||| ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 1383 acgtctccgatctggtggaggggttgatgaagctgatggaaggggagcacgtagggccat 1442
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
| |||||||| ||||| || |||||||| ||||||||||||||||| || || |||||||
Sbjct: 1443 tcaacctgggaaacccaggggagttcacaatgctggagcttgccaaggtggtgcaggaca 1502
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||||||||| ||||| |||||||||||| | | ||||||| |||||||| |||||||
Sbjct: 1503 ccatcgacccaaacgcgcggatcgagttcaggccgaacaccgccgacgacccgcacaagc 1562
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
| ||||| |||||| |||| |||||||||||||| || |||||||| |||||||||||||
Sbjct: 1563 ggaagccggacatcagccgcgccaaggagctcctcggctgggagcccaagatccccctcc 1622
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
| ||||||| || ||||||||| ||||||||| | |||||||||||||||||
Sbjct: 1623 acaagggcctcccgctcatggtccaggacttccgcgaccgcatcttcggcgacca 1677
>dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-6 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1498
Score = 319 bits (161), Expect = 1e-084
Identities = 397/475 (83%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtgt-gccaaccttgagtt-angatcgcacgtatcttcaaca 69
|||||||||| |||||||||| |||||||| ||| | | ||| || || ||||||||||
Sbjct: 895 tgaccatggactaccaccgtggcgccaacctcgaggtgaggattgctcggatcttcaaca 954
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
| || ||||| || |||||||| ||||||||||| || ||||| | | || || ||||
Sbjct: 955 cctacggcccccgtatgtgcatcgacgatggccgggtcgtcagcaactttgtcgcccagg 1014
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| ||||| |||||||| || || || || ||||| || ||||| ||||| |
Sbjct: 1015 cactgaggaaggagcccttgacggtgtacggcgacggtaagcagacgaggagcttccagt 1074
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
| || || |||||||| ||||| ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 1075 acgtctccgatctggtggaggggttgatgaagctgatggaaggggagcacgtagggccat 1134
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
| |||||||| ||||| || |||||||| ||||||||||||||||| || || |||||||
Sbjct: 1135 tcaacctgggaaacccaggggagttcacaatgctggagcttgccaaggtggtgcaggaca 1194
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||||||||| ||||| |||||||||||| | | ||||||| |||||||| |||||||
Sbjct: 1195 ccatcgacccaaacgcgcggatcgagttcaggccgaacaccgccgacgacccgcacaagc 1254
Query: 370 gcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatccccctcc 429
| ||||| |||||| |||| |||||||||||||| || |||||||| |||||||||||||
Sbjct: 1255 ggaagccggacatcagccgcgccaaggagctcctcggctgggagcccaagatccccctcc 1314
Query: 430 gcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
| ||||||| || ||||||||| ||||||||| | |||||||||||||||||
Sbjct: 1315 acaagggcctcccgctcatggtccaggacttccgcgaccgcatcttcggcgacca 1369
>dbj|AK099614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050E02, full
insert sequence
Length = 1965
Score = 313 bits (158), Expect = 8e-083
Identities = 357/425 (84%)
Strand = Plus / Plus
Query: 60 atcttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantc 119
||||||||||| || ||||| || |||||||| ||||||||||| || ||||| | |
Sbjct: 1084 atcttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcagcaacttt 1143
Query: 120 gttgctcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccagg 179
|| || |||||||||| ||| ||||| |||||||| || || || || ||||| || |||
Sbjct: 1144 gtcgcccaggcactgaggaaggagcccttgacggtgtacggcgacggtaagcagacgagg 1203
Query: 180 agtttccaatatgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcat 239
|| ||||| || || || |||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 1204 agcttccagtacgtctccgatctggtggaggggttgatgaagctgatggaaggggagcac 1263
Query: 240 gtaggaccatttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangtt 299
||||| ||||| |||||||| ||||| || |||||||| ||||||||||||||||| ||
Sbjct: 1264 gtagggccattcaacctgggaaacccaggggagttcacaatgctggagcttgccaaggtg 1323
Query: 300 gtccaggacaccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgac 359
|| ||||||||||||||||| ||||| |||||||||||| | | ||||||| ||||||
Sbjct: 1324 gtgcaggacaccatcgacccaaacgcgcggatcgagttcaggccgaacaccgccgacgac 1383
Query: 360 ccacacaagcgcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaag 419
|| |||||||| ||||| |||||| |||| |||||||||||||| || |||||||| |||
Sbjct: 1384 ccgcacaagcggaagccggacatcagccgcgccaaggagctcctcggctgggagcccaag 1443
Query: 420 atccccctccgcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggc 479
|||||||||| | ||||||| || ||||||||| ||||||||| | ||||||||||||
Sbjct: 1444 atccccctccacaagggcctcccgctcatggtccaggacttccgcgaccgcatcttcggc 1503
Query: 480 gacca 484
|||||
Sbjct: 1504 gacca 1508
>gb|CB653221.1|CB653221 OSJNEc04A21.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04A21 3', mRNA sequence
Length = 782
Score = 291 bits (147), Expect = 3e-076
Identities = 337/402 (83%)
Strand = Plus / Minus
Query: 83 catgtgcattgacgatggccgtgttgtcagttaantcgttgctcaggcactgangaanga 142
|||||||||||| ||||||||||||||||| | | |||||||||||||||| ||| ||
Sbjct: 782 catgtgcattgatgatggccgtgttgtcagcaactttgttgctcaggcactgaggaagga 723
Query: 143 gccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatgtttctgatct 202
|| ||||| || ||||||||||| ||||| || ||||| || |||||||| |||||| |
Sbjct: 722 acctttgactgtctatggtgatggcaagcagactaggagctttcaatatgtctctgattt 663
Query: 203 ggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaa 262
||| || || |||||| |||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 662 ggtggaagggttgatgagcttgatggaaggggagcacataggaccatttaacctgggtaa 603
Query: 263 ccccggcgagttcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaa 322
|| || |||||||||||||||||||| || || ||||||||||||||||| || || ||
Sbjct: 602 tccgggtgagttcaccatgctggagctggctaaggttgtccaggacaccattgatccgaa 543
Query: 323 cgcacggatcgagttccgtcagaacacccangacgacccacacaagcgcaagcccgacat 382
|| || || |||||||||| |||||| || || ||||||||||||||||| |||||
Sbjct: 542 tgctcgcattgagttccgtccgaacactgcggatgatccacacaagcgcaagcctgacat 483
Query: 383 cggccgtgccaaggagctccttgggtgggagccaaagatccccctccgcgagggccttcc 442
| |||||| || |||||||| || |||||||| ||| | ||||| || |||||||||||
Sbjct: 482 cacccgtgcgaaagagctcctgggctgggagcccaaggttcccctgcgtgagggccttcc 423
Query: 443 cctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 422 cctcatggttaccgacttccgcaaacgcatctttggcgacca 381
>gb|CB674716.1|CB674716 OSJNEe09O17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09O17 3', mRNA sequence
Length = 788
Score = 289 bits (146), Expect = 1e-075
Identities = 336/401 (83%)
Strand = Plus / Minus
Query: 84 atgtgcattgacgatggccgtgttgtcagttaantcgttgctcaggcactgangaangag 143
||||||||||| ||||||||||||||||| | | |||||||||||||||| ||| ||
Sbjct: 788 atgtgcattgatgatggccgtgttgtcagcaactttgttgctcaggcactgaggaaggaa 729
Query: 144 ccattgacggtttatggtgatggaaagcaaaccaggagtttccaatatgtttctgatctg 203
|| ||||| || ||||||||||| ||||| || ||||| || |||||||| |||||| ||
Sbjct: 728 cctttgactgtctatggtgatggcaagcagactaggagctttcaatatgtctctgatttg 669
Query: 204 gtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaac 263
|| || || |||||| |||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 668 gtggaagggttgatgagcttgatggaaggggagcacataggaccatttaacctgggtaat 609
Query: 264 cccggcgagttcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaac 323
|| || |||||||||||||||||||| || || ||||||||||||||||| || || ||
Sbjct: 608 ccgggtgagttcaccatgctggagctggctaaggttgtccaggacaccattgatccgaat 549
Query: 324 gcacggatcgagttccgtcagaacacccangacgacccacacaagcgcaagcccgacatc 383
|| || || |||||||||| |||||| || || ||||||||||||||||| ||||||
Sbjct: 548 gctcgcattgagttccgtccgaacactgcggatgatccacacaagcgcaagcctgacatc 489
Query: 384 ggccgtgccaaggagctccttgggtgggagccaaagatccccctccgcgagggccttccc 443
|||||| || |||||||| || |||||||| ||| | ||||| || ||||||||||||
Sbjct: 488 acccgtgcgaaagagctcctgggctgggagcccaaggttcccctgcgtgagggccttccc 429
Query: 444 ctcatggtcaccgacttccgcaagcgcatcttcggcgacca 484
|||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 428 ctcatggttaccgacttccgcaaacgcatctttggcgacca 388
>gb|CB666956.1|CB666956 OSJNEd14B05.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14B05 3', mRNA sequence
Length = 784
Score = 274 bits (138), Expect = 7e-071
Identities = 325/389 (83%)
Strand = Plus / Minus
Query: 96 gatggccgtgttgtcagttaantcgttgctcaggcactgangaangagccattgacggtt 155
||||||||||||||||| | | |||||||||||||||| ||| || || ||||| ||
Sbjct: 780 gatggccgtgttgtcagcaactttgttgctcaggcactgaggaaggaacctttgactgtc 721
Query: 156 tatggtgatggaaagcaaaccaggagtttccaatatgtttctgatctggtcgagggtctg 215
||||||||||| ||||| || ||||| || |||||||| |||||| |||| || || ||
Sbjct: 720 tatggtgatggcaagcagactaggagctttcaatatgtctctgatttggtggaagggttg 661
Query: 216 atgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttc 275
|||| |||||||||| ||||| ||||||||||||||||||| || || || ||||||
Sbjct: 660 atgagcttgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttc 601
Query: 276 accatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgag 335
|||||||||||||| || || ||||||||||||||||| || || || || || || |||
Sbjct: 600 accatgctggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgag 541
Query: 336 ttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaag 395
||||||| |||||| || || ||||||||||||||||| |||||| |||||| ||
Sbjct: 540 ttccgtccgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaa 481
Query: 396 gagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcacc 455
|||||||| || |||||||| ||| | ||||| || |||||||||||||||||||| |||
Sbjct: 480 gagctcctgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttacc 421
Query: 456 gacttccgcaagcgcatcttcggcgacca 484
||||||||||| |||||||| ||||||||
Sbjct: 420 gacttccgcaaacgcatctttggcgacca 392
>gb|CB654314.1|CB654314 OSJNEc06H06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc06H06 3', mRNA sequence
Length = 834
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 825 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 766
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 765 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 706
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 705 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 646
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 645 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 586
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 585 aggacttccgcgaccgcatcttcggcgacca 555
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0618H09
Length = 142306
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 1255 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 1314
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 1315 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 1374
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 1375 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 1434
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 1435 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 1494
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 1495 aggacttccgcgaccgcatcttcggcgacca 1525
Score = 44.1 bits (22), Expect = 0.12
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 63 ttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
|||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 1 ttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcag 50
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0037D09
Length = 140470
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 9466 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 9525
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 9526 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 9585
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 9586 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 9645
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 9646 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 9705
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 9706 aggacttccgcgaccgcatcttcggcgacca 9736
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 60 atcttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 8209 atcttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcag 8261
>gb|AACV01017003.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg017003, whole
genome shotgun sequence
Length = 12138
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 10452 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 10393
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 10392 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 10333
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 10332 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 10273
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 10272 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 10213
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 10212 aggacttccgcgaccgcatcttcggcgacca 10182
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 60 atcttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 11709 atcttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcag 11657
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 16056719 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 16056778
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 16056779 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 16056838
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 16056839 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 16056898
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 16056899 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 16056958
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 16056959 aggacttccgcgaccgcatcttcggcgacca 16056989
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 60 atcttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 16055462 atcttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcag 16055514
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 14029889 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 14029948
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 14029949 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 14030008
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 14030009 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 14030068
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 14030069 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 14030128
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 14030129 aggacttccgcgaccgcatcttcggcgacca 14030159
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 60 atcttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 14028632 atcttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcag 14028684
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 27429328 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 27429387
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 27429388 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 27429447
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 27429448 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 27429507
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 27429508 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 27429567
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 27429568 aggacttccgcgaccgcatcttcggcgacca 27429598
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 60 atcttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 27428071 atcttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcag 27428123
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 256 bits (129), Expect = 2e-065
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 214 tgatgaagctgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagt 273
||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 28443714 tgatgaagctgatggaaggggagcacgtagggccattcaacctgggaaacccaggggagt 28443773
Query: 274 tcaccatgctggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcg 333
|||| ||||||||||||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct: 28443774 tcacaatgctggagcttgccaaggtggtgcaggacaccatcgacccaaacgcgcggatcg 28443833
Query: 334 agttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgcca 393
||||| | | ||||||| |||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 28443834 agttcaggccgaacaccgccgacgacccgcacaagcggaagccggacatcagccgcgcca 28443893
Query: 394 aggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtca 453
|||||||||| || |||||||| ||||||||||||| | ||||||| || |||||||||
Sbjct: 28443894 aggagctcctcggctgggagcccaagatccccctccacaagggcctcccgctcatggtcc 28443953
Query: 454 ccgacttccgcaagcgcatcttcggcgacca 484
||||||||| | |||||||||||||||||
Sbjct: 28443954 aggacttccgcgaccgcatcttcggcgacca 28443984
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 60 atcttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 28442457 atcttcaacacctacggcccccgtatgtgcatcgacgatggccgggtcgtcag 28442509
>gb|CB646118.1|CB646118 OSJNEb08F06.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08F06 5', mRNA sequence
Length = 778
Score = 238 bits (120), Expect = 4e-060
Identities = 223/256 (87%), Gaps = 2/256 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgag-ttangatcgcacgtatcttcaaca 69
|||||||||| || ||||||| ||||||||||||| ||| |||||| |||||||||||||
Sbjct: 523 tgaccatggactatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaaca 582
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
|||||||||||||||||||||| || ||||||||||||||||| | | ||||||||||
Sbjct: 583 catatggccctcgcatgtgcatcgatgatggccgtgttgtcagcaactttgttgctcagg 642
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
| ||| ||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 643 ctttgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaat 702
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
|||| ||||||||||| ||||| |||||| ||| |||||| | ||||| ||||| ||||
Sbjct: 703 atgtctctgatctggttgagggattgatgacgctcatggaaagtgagcacgtagggccat 762
Query: 250 ttaacctgggcaaccc 265
| |||||||| |||||
Sbjct: 763 tcaacctgggtaaccc 778
>gb|CF311240.1|CF311240 ABF--06-G05.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-G05, mRNA sequence
Length = 589
Score = 238 bits (120), Expect = 4e-060
Identities = 291/350 (83%)
Strand = Plus / Plus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgct 125
||||||||||| ||||||||||||||||| ||||||||||||||||| | | ||||||
Sbjct: 240 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgct 299
Query: 126 caggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttc 185
|||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 300 caggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagcttt 359
Query: 186 caatatgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtagga 245
|||||||| |||||| |||| || || |||||| |||||||||| ||||| |||||
Sbjct: 360 caatatgtctctgatttggtggaagggttgatgagcttgatggaaggggagcacatagga 419
Query: 246 ccatttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccag 305
|||||||||||| | || || || |||||||||||||||||||| || || |||||||||
Sbjct: 420 ccatttaacctgngtaatccgggtgagttcaccatgctggagctggctaaggttgtccag 479
Query: 306 gacaccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacac 365
|||||||| || || || || || || |||||||||| |||||| || || ||||||
Sbjct: 480 gacaccattgatccgaatgctcgcattgagttccgtccgaacactgcggatgatccacac 539
Query: 366 aagcgcaagcccgacatcggccgtgccaaggagctccttgggtgggagcc 415
||||||||||| |||||| |||||| || |||||||| || ||||||||
Sbjct: 540 aagcgcaagcctgacatcacccgtgcgaaagagctcctgggctgggagcc 589
>gb|CB654313.1|CB654313 OSJNEc06H06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc06H06 5', mRNA sequence
Length = 784
Score = 230 bits (116), Expect = 9e-058
Identities = 310/374 (82%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtgt-gccaaccttgagtt-angatcgcacgtatcttcaaca 69
|||||||||| |||||||||| |||||||| ||| | | ||| || || ||||||||||
Sbjct: 409 tgaccatggactaccaccgtggcgccaacctcgaggtgaggattgctcggatcttcaaca 468
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
| || ||||| || |||||||| ||||||||||| || ||||| | | || || ||||
Sbjct: 469 cctacggcccccgtatgtgcatcgacgatggccgggtcgtcagcaactttgtcgcccagg 528
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| ||||| |||||||| || || || || ||||| || ||||| ||||| |
Sbjct: 529 cactgaggaaggagcccttgacggtgtacggcgacggtaagcagacgaggagcttccagt 588
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgtaggaccat 249
| || || |||||||| ||||| ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 589 acgtctccgatctggtggaggggttgatgaagctgatggaaggggagcacgtagggccat 648
Query: 250 ttaacctgggcaaccccggcgagttcaccatgctggagcttgccaangttgtccaggaca 309
| |||||||| ||||| || |||||||| ||||||||||||||||| || || |||||||
Sbjct: 649 tcaacctgggaaacccaggggagttcacaatgctggagcttgccaaggtggtgcaggaca 708
Query: 310 ccatcgaccccaacgcacggatcgagttccgtcagaacacccangacgacccacacaagc 369
|||||||||| ||||| |||||||||||| | | ||||||| |||||||| |||||||
Sbjct: 709 ccatcgacccaaacgcgcggatcgagttcaggccgaacaccgccgacgacccgcacaagc 768
Query: 370 gcaagcccgacatc 383
| ||||| ||||||
Sbjct: 769 ggaagccggacatc 782
>gb|AU173448.1|AU173448 AU173448 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3167, mRNA sequence
Length = 449
Score = 222 bits (112), Expect = 2e-055
Identities = 144/155 (92%)
Strand = Plus / Plus
Query: 335 gttccgtcagaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaa 394
|||||||| |||||||| |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 1 gttccgtcccaacacccaggacgacccgcacaagcgcaagcctgacatcggccgtgccaa 60
Query: 395 ggagctccttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcac 454
|||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||
Sbjct: 61 ggagctccttgggtgggagccaaagatccctctccacaagggtcttcccctcatggtcac 120
Query: 455 cgacttccgcaagcgcatcttcggcgaccaagaca 489
|||||||||||||||||| ||||| ||||||||||
Sbjct: 121 cgacttccgcaagcgcattttcggtgaccaagaca 155
>gb|CB685001.1|CB685001 OSJNEf15A20.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15A20 3', mRNA sequence
Length = 723
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Minus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 680 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 621
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 620 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 561
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 560 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 501
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 500 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 441
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 440 gcaaacgcatctttggcgacca 419
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1012D10
Length = 168267
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Minus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 102691 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 102632
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 102631 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 102572
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 102571 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 102512
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 102511 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 102452
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 102451 gcaaacgcatctttggcgacca 102430
Score = 77.8 bits (39), Expect = 8e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 103357 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcag 103311
Score = 61.9 bits (31), Expect = 5e-007
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 125 tcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagttt 184
||||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 103197 tcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctt 103138
Query: 185 ccaatatgtttctgatctggt 205
|||||||| |||||| ||||
Sbjct: 103137 tcaatatgtctctgatttggt 103117
Score = 54.0 bits (27), Expect = 1e-004
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 12 tgaccatggattaccaccgt-gtgccaaccttgag 45
|||||||||||||||||||| ||||||||||||||
Sbjct: 103507 tgaccatggattaccaccgtggtgccaaccttgag 103473
>gb|AACV01000881.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000881, whole
genome shotgun sequence
Length = 15617
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Plus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 13223 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 13282
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 13283 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 13342
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 13343 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 13402
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 13403 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 13462
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 13463 gcaaacgcatctttggcgacca 13484
Score = 77.8 bits (39), Expect = 8e-012
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 12557 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcag 12603
Score = 61.9 bits (31), Expect = 5e-007
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 125 tcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagttt 184
||||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 12717 tcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctt 12776
Query: 185 ccaatatgtttctgatctggt 205
|||||||| |||||| ||||
Sbjct: 12777 tcaatatgtctctgatttggt 12797
Score = 54.0 bits (27), Expect = 1e-004
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgt-gtgccaaccttgag 45
|||||||||||||||||||| ||||||||||||||
Sbjct: 12407 tgaccatggattaccaccgtggtgccaaccttgag 12441
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Minus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 11888188 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 11888129
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 11888128 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 11888069
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 11888068 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 11888009
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 11888008 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 11887949
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 11887948 gcaaacgcatctttggcgacca 11887927
Score = 77.8 bits (39), Expect = 8e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 11888854 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcag 11888808
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 tgacggtttatggtgatggaaagcaaaccaggagtttccaatatgtttctgatctggt 205
|||| ||||||||||||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 35973333 tgacagtttatggtgatggaaaacaaactagaagttttcagtatgtttctgatctggt 35973390
Score = 61.9 bits (31), Expect = 5e-007
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 125 tcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagttt 184
||||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 11888694 tcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctt 11888635
Query: 185 ccaatatgtttctgatctggt 205
|||||||| |||||| ||||
Sbjct: 11888634 tcaatatgtctctgatttggt 11888614
Score = 54.0 bits (27), Expect = 1e-004
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 12 tgaccatggattaccaccgt-gtgccaaccttgag 45
|||||||||||||||||||| ||||||||||||||
Sbjct: 11889004 tgaccatggattaccaccgtggtgccaaccttgag 11888970
>ref|NT_079961.2| Oryza sativa (japonica cultivar-group)
Length = 3480660
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Minus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 397413 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 397354
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 397353 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 397294
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 397293 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 397234
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 397233 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 397174
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 397173 gcaaacgcatctttggcgacca 397152
Score = 77.8 bits (39), Expect = 8e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 398079 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcag 398033
Score = 61.9 bits (31), Expect = 5e-007
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 125 tcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagttt 184
||||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 397919 tcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctt 397860
Query: 185 ccaatatgtttctgatctggt 205
|||||||| |||||| ||||
Sbjct: 397859 tcaatatgtctctgatttggt 397839
Score = 54.0 bits (27), Expect = 1e-004
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 12 tgaccatggattaccaccgt-gtgccaaccttgag 45
|||||||||||||||||||| ||||||||||||||
Sbjct: 398229 tgaccatggattaccaccgtggtgccaaccttgag 398195
>gb|CH401165.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000002
genomic scaffold, whole genome shotgun sequence
Length = 5008528
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Minus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 308213 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 308154
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 308153 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 308094
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 308093 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 308034
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 308033 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 307974
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 307973 gcaaacgcatctttggcgacca 307952
Score = 77.8 bits (39), Expect = 8e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 308879 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcag 308833
Score = 61.9 bits (31), Expect = 5e-007
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 125 tcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagttt 184
||||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 308719 tcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctt 308660
Query: 185 ccaatatgtttctgatctggt 205
|||||||| |||||| ||||
Sbjct: 308659 tcaatatgtctctgatttggt 308639
Score = 54.0 bits (27), Expect = 1e-004
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 12 tgaccatggattaccaccgt-gtgccaaccttgag 45
|||||||||||||||||||| ||||||||||||||
Sbjct: 309029 tgaccatggattaccaccgtggtgccaaccttgag 308995
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Minus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 11924708 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 11924649
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 11924648 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 11924589
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 11924588 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 11924529
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 11924528 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 11924469
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 11924468 gcaaacgcatctttggcgacca 11924447
Score = 77.8 bits (39), Expect = 8e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 11925374 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcag 11925328
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 tgacggtttatggtgatggaaagcaaaccaggagtttccaatatgtttctgatctggt 205
|||| ||||||||||||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 35361360 tgacagtttatggtgatggaaaacaaactagaagttttcagtatgtttctgatctggt 35361417
Score = 61.9 bits (31), Expect = 5e-007
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 125 tcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagttt 184
||||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 11925214 tcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctt 11925155
Query: 185 ccaatatgtttctgatctggt 205
|||||||| |||||| ||||
Sbjct: 11925154 tcaatatgtctctgatttggt 11925134
Score = 54.0 bits (27), Expect = 1e-004
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 12 tgaccatggattaccaccgt-gtgccaaccttgag 45
|||||||||||||||||||| ||||||||||||||
Sbjct: 11925524 tgaccatggattaccaccgtggtgccaaccttgag 11925490
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 214 bits (108), Expect = 6e-053
Identities = 223/262 (85%)
Strand = Plus / Minus
Query: 223 tgatggaaggcgagcatgtaggaccatttaacctgggcaaccccggcgagttcaccatgc 282
|||||||||| ||||| ||||||||||||||||||| || || || |||||||||||||
Sbjct: 11890406 tgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgc 11890347
Query: 283 tggagcttgccaangttgtccaggacaccatcgaccccaacgcacggatcgagttccgtc 342
||||||| || || ||||||||||||||||| || || || || || || ||||||||||
Sbjct: 11890346 tggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtc 11890287
Query: 343 agaacacccangacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctcc 402
|||||| || || ||||||||||||||||| |||||| |||||| || |||||||
Sbjct: 11890286 cgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcc 11890227
Query: 403 ttgggtgggagccaaagatccccctccgcgagggccttcccctcatggtcaccgacttcc 462
| || |||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 11890226 tgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttcc 11890167
Query: 463 gcaagcgcatcttcggcgacca 484
|||| |||||||| ||||||||
Sbjct: 11890166 gcaaacgcatctttggcgacca 11890145
Score = 77.8 bits (39), Expect = 8e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 66 aacacatatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 11891072 aacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcag 11891026
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 tgacggtttatggtgatggaaagcaaaccaggagtttccaatatgtttctgatctggt 205
|||| ||||||||||||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 35892663 tgacagtttatggtgatggaaaacaaactagaagttttcagtatgtttctgatctggt 35892720
Score = 61.9 bits (31), Expect = 5e-007
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 125 tcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagttt 184
||||||||||| ||| || || ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 11890912 tcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctt 11890853
Query: 185 ccaatatgtttctgatctggt 205
|||||||| |||||| ||||
Sbjct: 11890852 tcaatatgtctctgatttggt 11890832
Score = 54.0 bits (27), Expect = 1e-004
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 12 tgaccatggattaccaccgt-gtgccaaccttgag 45
|||||||||||||||||||| ||||||||||||||
Sbjct: 11891222 tgaccatggattaccaccgtggtgccaaccttgag 11891188
>gb|CF303741.1|CF303741 ABF1--03-B12.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-B12, mRNA sequence
Length = 552
Score = 200 bits (101), Expect = 8e-049
Identities = 173/196 (88%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgag-ttangatcgcacgtatcttcaaca 69
|||||||||| || ||||||| ||||||||||||| ||| |||||| |||||||||||||
Sbjct: 353 tgaccatggactatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaaca 412
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
|||||||||||||||||||||| || ||||||||||||||||| | ||||||||||
Sbjct: 413 catatggccctcgcatgtgcatcgatgatggccgtgttgtcagcaactntgttgctcagg 472
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
| ||| ||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 473 ctttgaggaaggagcctttgacggtttacggtgatggcaagcagaccaggagtttccaat 532
Query: 190 atgtttctgatctggt 205
|||| |||||||||||
Sbjct: 533 atgtctctgatctggt 548
>gb|CB653220.1|CB653220 OSJNEc04A21.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04A21 5', mRNA sequence
Length = 762
Score = 153 bits (77), Expect = 2e-034
Identities = 192/229 (83%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgagtt-angatcgcacgtatcttcaaca 69
||||||||||||||||||||| ||||||||||||| | | ||| || || || || ||||
Sbjct: 527 tgaccatggattaccaccgtggtgccaaccttgaggtgaggattgctcggatttttaaca 586
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgttgctcagg 129
||||||| ||||||||||||||||| ||||||||||||||||| | | ||||||||||
Sbjct: 587 catatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcagg 646
Query: 130 cactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagtttccaat 189
|||||| ||| || || ||||| || ||||||||||| ||||| || ||||| || ||||
Sbjct: 647 cactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctttcaat 706
Query: 190 atgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagca 238
|||| |||||| |||| || || |||||| |||||||||| |||||
Sbjct: 707 atgtctctgatttggtggaagggttgatgagcttgatggaaggggagca 755
>gb|CB661723.1|CB661723 OSJNEd05A04.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A04 5', mRNA sequence
Length = 720
Score = 127 bits (64), Expect = 1e-026
Identities = 95/103 (92%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 12 tgaccatggattaccaccgtg-tgccaaccttgag-ttangatcgcacgtatcttcaaca 69
|||||||||| || ||||||| ||||||||||||| ||| |||||| |||||||||||||
Sbjct: 605 tgaccatggactatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaaca 664
Query: 70 catatggccctcgcatgtgcattgacgatggccgtgttgtcag 112
|||||||||||||||||||||| || |||||||||||||||||
Sbjct: 665 catatggccctcgcatgtgcatcgatgatggccgtgttgtcag 707
>gb|CF330800.1|CF330800 NACL--06-K19.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--06-K19, mRNA sequence
Length = 572
Score = 117 bits (59), Expect = 1e-023
Identities = 113/131 (86%)
Strand = Plus / Plus
Query: 354 gacgacccacacaagcgcaagcccgacatcggccgtgccaaggagctccttgggtgggag 413
|||||||| |||| ||| ||||| |||||| |||| |||||||||||||| || ||||||
Sbjct: 30 gacgacccgcacaggcggaagccggacatcagccgcgccaaggagctcctcggctgggag 89
Query: 414 ccaaagatccccctccgcgagggccttcccctcatggtcaccgacttccgcaagcgcatc 473
|| ||||||||||||| | ||||||| || ||||||||| ||||||||| | ||||||
Sbjct: 90 cccaagatccccctccacaagggcctcccgctcatggtccaggacttccgcgaccgcatc 149
Query: 474 ttcggcgacca 484
|||||||||||
Sbjct: 150 ttcggcgacca 160
>gb|CA999040.1|CA999040 S234M_D01 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 588
Score = 115 bits (58), Expect = 4e-023
Identities = 106/122 (86%)
Strand = Plus / Plus
Query: 363 cacaagcgcaagcccgacatcggccgtgccaaggagctccttgggtgggagccaaagatc 422
|||||||| ||||| |||||| |||| |||||||||||||| || |||||||| ||||||
Sbjct: 5 cacaagcggaagccggacatcagccgcgccaaggagctcctcggctgggagcccaagatc 64
Query: 423 cccctccgcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgac 482
||||||| | ||||||| || ||||||||| ||||||||| | |||||||||||||||
Sbjct: 65 cccctccacaagggcctcccgctcatggtccaggacttccgcgaccgcatcttcggcgac 124
Query: 483 ca 484
||
Sbjct: 125 ca 126
>dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I12, full
insert sequence
Length = 1604
Score = 89.7 bits (45), Expect = 2e-015
Identities = 183/230 (79%)
Strand = Plus / Plus
Query: 63 ttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgtt 122
|||||||||||||||||||| ||||| | || ||||| |||||||| || | ||||
Sbjct: 913 ttcaacacatatggccctcgtatgtgtttagatgatgggcgtgttgttagcaacttcgtc 972
Query: 123 gctcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagt 182
|||||| || || ||| ||||| |||| |||||||||||||||||||| || || |||
Sbjct: 973 gctcagacattgcggaaacagccaatgacagtttatggtgatggaaagcagactagaagt 1032
Query: 183 ttccaatatgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgta 242
|| ||||||||||| ||| |||| || || |||| | ||||||||| | |||||| ||
Sbjct: 1033 tttcaatatgtttcagatttggttgatggattgataaccctgatggaaagtgagcatata 1092
Query: 243 ggaccatttaacctgggcaaccccggcgagttcaccatgctggagcttgc 292
||||| || ||| |||| || || || || || |||||| | ||||||||
Sbjct: 1093 ggacctttcaacttgggaaatcctggagaatttaccatgttagagcttgc 1142
>dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-1 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1303
Score = 89.7 bits (45), Expect = 2e-015
Identities = 183/230 (79%)
Strand = Plus / Plus
Query: 63 ttcaacacatatggccctcgcatgtgcattgacgatggccgtgttgtcagttaantcgtt 122
|||||||||||||||||||| ||||| | || ||||| |||||||| || | ||||
Sbjct: 818 ttcaacacatatggccctcgtatgtgtttagatgatgggcgtgttgttagcaacttcgtc 877
Query: 123 gctcaggcactgangaangagccattgacggtttatggtgatggaaagcaaaccaggagt 182
|||||| || || ||| ||||| |||| |||||||||||||||||||| || || |||
Sbjct: 878 gctcagacattgcggaaacagccaatgacagtttatggtgatggaaagcagactagaagt 937
Query: 183 ttccaatatgtttctgatctggtcgagggtctgatgaagctgatggaaggcgagcatgta 242
|| ||||||||||| ||| |||| || || |||| | ||||||||| | |||||| ||
Sbjct: 938 tttcaatatgtttcagatttggttgatggattgataaccctgatggaaagtgagcatata 997
Query: 243 ggaccatttaacctgggcaaccccggcgagttcaccatgctggagcttgc 292
||||| || ||| |||| || || || || || |||||| | ||||||||
Sbjct: 998 ggacctttcaacttgggaaatcctggagaatttaccatgttagagcttgc 1047
>gb|AU173188.1|AU173188 AU173188 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1645, mRNA sequence
Length = 449
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 423 cccctccgcgagggccttcccctcatggtcaccgacttccgcaagcgcatcttcggcgac 482
||||| || |||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 5 cccctgcgtgagggccttcccctcatggttaccgacttccgcaaacgcatctttggcgac 64
Query: 483 ca 484
||
Sbjct: 65 ca 66
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 898,232
Number of Sequences: 438736
Number of extensions: 898232
Number of successful extensions: 4596
Number of sequences better than 0.5: 68
Number of HSP's better than 0.5 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4200
Number of HSP's gapped (non-prelim): 355
length of query: 805
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 784
effective length of database: 2,791,206,460
effective search space: 2188305864640
effective search space used: 2188305864640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)