BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3024030.2.1
(412 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 ... 100 1e-018
gb|AACV01008302.1| Oryza sativa (japonica cultivar-group) c... 100 1e-018
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 100 1e-018
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 100 1e-018
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 100 1e-018
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 100 1e-018
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 100 1e-018
dbj|AK070637.1| Oryza sativa (japonica cultivar-group) cDNA... 94 7e-017
ref|XM_470502.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-015
ref|NT_107118.1| Oryza sativa (japonica cultivar-group) 54 6e-005
gb|AACV01022869.1| Oryza sativa (japonica cultivar-group) c... 54 6e-005
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 54 6e-005
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 54 6e-005
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 54 6e-005
gb|AC136448.2| Oryza sativa (japonica cultivar-group) chrom... 54 6e-005
gb|AC136501.2| Oryza sativa (japonica cultivar-group) chrom... 54 6e-005
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 54 6e-005
gb|AQ579032.1|AQ579032 nbxb0093H12f CUGI Rice BAC Library O... 48 0.004
gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 gen... 48 0.004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 48 0.004
dbj|AP005769.3| Oryza sativa (japonica cultivar-group) geno... 48 0.004
dbj|AP004744.2| Oryza sativa (japonica cultivar-group) geno... 48 0.004
gb|AACV01008189.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
gb|AACV01014740.1| Oryza sativa (japonica cultivar-group) c... 48 0.004
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 48 0.004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.004
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 48 0.004
gb|CA999925.1|CA999925 S234L_E07 Rice cold stress germinati... 46 0.015
gb|CF339971.1|CF339971 RCL1--06-I15.g1 Regenerated callus l... 46 0.015
dbj|AP003997.1| Oryza sativa (japonica cultivar-group) chro... 46 0.015
dbj|AP004265.1| Oryza sativa (japonica cultivar-group) chro... 46 0.015
dbj|AP004319.1| Oryza sativa (japonica cultivar-group) chro... 46 0.015
dbj|AP003262.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AK102531.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.015
dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.015
gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H0... 46 0.015
dbj|AP005316.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
gb|AC098573.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
dbj|AP004300.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP004275.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP003915.4| Oryza sativa (japonica cultivar-group) geno... 46 0.015
gb|AC120988.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
dbj|AP003728.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP004989.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP003216.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP003303.4| Oryza sativa (japonica cultivar-group) geno... 46 0.015
gb|AACV01001797.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01002976.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01003055.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01004291.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01009597.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01012769.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01014792.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01016710.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01016994.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
gb|AACV01022107.1| Oryza sativa (japonica cultivar-group) c... 46 0.015
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.015
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 46 0.015
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 46 0.015
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 46 0.015
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 46 0.015
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 46 0.015
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 46 0.015
dbj|AP004870.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 46 0.015
dbj|AP003683.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP004332.3| Oryza sativa (japonica cultivar-group) geno... 46 0.015
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromoso... 46 0.015
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 46 0.015
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 46 0.015
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.015
dbj|AP004633.1| Oryza sativa (japonica cultivar-group) chro... 44 0.058
dbj|AP004701.1| Oryza sativa (japonica cultivar-group) chro... 44 0.058
dbj|AP004339.3| Oryza sativa (japonica cultivar-group) geno... 44 0.058
gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L2... 44 0.058
dbj|AP004702.3| Oryza sativa (japonica cultivar-group) geno... 44 0.058
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 44 0.058
dbj|AP005544.3| Oryza sativa (japonica cultivar-group) geno... 44 0.058
dbj|AP005643.3| Oryza sativa (japonica cultivar-group) geno... 44 0.058
dbj|AP000391.2| Oryza sativa (japonica cultivar-group) geno... 44 0.058
gb|AACV01004799.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01009687.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01009812.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01012965.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01013570.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01016855.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01018557.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01018988.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
gb|AACV01022166.1| Oryza sativa (japonica cultivar-group) c... 44 0.058
dbj|AP005822.3| Oryza sativa (japonica cultivar-group) geno... 44 0.058
ref|NT_079861.2| Oryza sativa (japonica cultivar-group) 44 0.058
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 44 0.058
dbj|AP004334.2| Oryza sativa (japonica cultivar-group) geno... 44 0.058
dbj|AP005524.3| Oryza sativa (japonica cultivar-group) geno... 44 0.058
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 44 0.058
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 44 0.058
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.058
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.058
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.058
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.058
emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromoso... 44 0.058
emb|AL731641.4| Oryza sativa (japonica cultivar-group) chro... 44 0.058
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 44 0.058
gb|AQ287287.1|AQ287287 nbxb0029G02r CUGI Rice BAC Library O... 42 0.23
gb|AQ329516.1|AQ329516 nbxb0045K03r CUGI Rice BAC Library O... 42 0.23
gb|D38920.1|D38920 RICC2489A Rice callus Oryza sativa (japo... 42 0.23
gb|D40569.1|D40569 RICS2635A Rice shoot Oryza sativa (japon... 42 0.23
gb|C25811.1|C25811 C25811 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C25813.1|C25813 C25813 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C25817.1|C25817 C25817 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C25821.1|C25821 C25821 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C25870.1|C25870 C25870 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C25927.1|C25927 C25927 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C26057.1|C26057 C26057 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C26420.1|C26420 C26420 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C26616.1|C26616 C26616 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C27176.1|C27176 C27176 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C28252.1|C28252 C28252 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C93465.1|C93465 C93465 Rice callus Oryza sativa (japonic... 42 0.23
gb|D15573.1|D15573 RICC0851A Rice callus Oryza sativa (japo... 42 0.23
gb|D23235.1|D23235 RICC2463A Rice callus Oryza sativa (japo... 42 0.23
gb|C97388.1|C97388 C97388 Rice callus Oryza sativa (japonic... 42 0.23
gb|C97727.1|C97727 C97727 Rice callus Oryza sativa (japonic... 42 0.23
gb|C97759.1|C97759 C97759 Rice callus Oryza sativa (japonic... 42 0.23
gb|AU056117.1|AU056117 AU056117 Oryza sativa mature leaf Ni... 42 0.23
gb|AU062628.1|AU062628 AU062628 Rice callus Oryza sativa (j... 42 0.23
gb|AU062650.1|AU062650 AU062650 Rice callus Oryza sativa (j... 42 0.23
gb|AU062776.1|AU062776 AU062776 Rice callus Oryza sativa (j... 42 0.23
gb|AU062921.1|AU062921 AU062921 Rice callus Oryza sativa (j... 42 0.23
gb|AU063312.1|AU063312 AU063312 Rice callus Oryza sativa (j... 42 0.23
gb|AU063574.1|AU063574 AU063574 Rice callus Oryza sativa (j... 42 0.23
gb|AU065532.1|AU065532 AU065532 Rice callus Oryza sativa (j... 42 0.23
gb|AU068960.1|AU068960 AU068960 Rice callus Oryza sativa (j... 42 0.23
gb|AU070535.1|AU070535 AU070535 Rice shoot Oryza sativa (ja... 42 0.23
gb|AU062448.2|AU062448 AU062448 Rice callus Oryza sativa (j... 42 0.23
gb|AU076049.1|AU076049 AU076049 Rice panicle at flowering s... 42 0.23
gb|AU062504.2|AU062504 AU062504 Rice callus Oryza sativa (j... 42 0.23
gb|AU062562.2|AU062562 AU062562 Rice callus Oryza sativa (j... 42 0.23
gb|AU062518.2|AU062518 AU062518 Rice callus Oryza sativa (j... 42 0.23
gb|AU062497.2|AU062497 AU062497 Rice callus Oryza sativa (j... 42 0.23
gb|AU083363.1|AU083363 AU083363 Rice callus Oryza sativa (j... 42 0.23
gb|AU093199.1|AU093199 AU093199 Rice callus Oryza sativa (j... 42 0.23
gb|AU093250.1|AU093250 AU093250 Rice callus Oryza sativa (j... 42 0.23
gb|AU093351.1|AU093351 AU093351 Rice callus Oryza sativa (j... 42 0.23
gb|AU093534.1|AU093534 AU093534 Rice callus Oryza sativa (j... 42 0.23
gb|AU161221.1|AU161221 AU161221 Rice callus Oryza sativa (j... 42 0.23
gb|AU161276.1|AU161276 AU161276 Rice callus Oryza sativa (j... 42 0.23
gb|AU181954.1|AU181954 AU181954 Rice callus (2001) Oryza sa... 42 0.23
gb|AU181970.1|AU181970 AU181970 Rice callus (2001) Oryza sa... 42 0.23
gb|AU222712.1|AU222712 AU222712 Rice shoot Oryza sativa (ja... 42 0.23
gb|CB647873.1|CB647873 OSJNEb10P23.f OSJNEb Oryza sativa (j... 42 0.23
gb|CB649872.1|CB649872 OSJNEb14A20.f OSJNEb Oryza sativa (j... 42 0.23
gb|CB683093.1|CB683093 OSJNEf11A17.f OSJNEf Oryza sativa (j... 42 0.23
gb|CF306418.1|CF306418 HDA1--03-M16.g1 OsHDAC1-overexpressi... 42 0.23
gb|CV152436.1|CV152436 LS286-S.SEQ Cold stressed rice cDNA ... 42 0.23
gb|AU181903.2|AU181903 AU181903 Rice callus (2001) Oryza sa... 42 0.23
gb|C25881.2|C25881 C25881 Rice callus cDNA Oryza sativa (ja... 42 0.23
gb|C26732.2|C26732 C26732 Rice callus cDNA Oryza sativa (ja... 42 0.23
dbj|AP003624.1| Oryza sativa (japonica cultivar-group) chro... 42 0.23
dbj|AP003944.1| Oryza sativa (japonica cultivar-group) chro... 42 0.23
dbj|AP003982.1| Oryza sativa (japonica cultivar-group) chro... 42 0.23
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 42 0.23
dbj|AK061267.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK062719.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK069330.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK070481.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK070546.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK073964.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK100413.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK102358.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK105237.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
dbj|AK108260.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.23
emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC O... 42 0.23
emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC O... 42 0.23
gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, ... 42 0.23
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 42 0.23
gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbar... 42 0.23
gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 ... 42 0.23
gb|AC123521.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbar... 42 0.23
dbj|AP005649.3| Oryza sativa (japonica cultivar-group) geno... 42 0.23
emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC O... 42 0.23
emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC O... 42 0.23
dbj|AP005247.3| Oryza sativa (japonica cultivar-group) geno... 42 0.23
dbj|AP005098.4| Oryza sativa (japonica cultivar-group) geno... 42 0.23
ref|NT_079838.2| Oryza sativa (japonica cultivar-group) 42 0.23
ref|NT_107143.1| Oryza sativa (japonica cultivar-group) 42 0.23
ref|NT_107151.1| Oryza sativa (japonica cultivar-group) 42 0.23
ref|NT_107155.1| Oryza sativa (japonica cultivar-group) 42 0.23
dbj|AP003616.4| Oryza sativa (japonica cultivar-group) geno... 42 0.23
dbj|AP005445.3| Oryza sativa (japonica cultivar-group) geno... 42 0.23
dbj|AP003685.3| Oryza sativa (japonica cultivar-group) geno... 42 0.23
dbj|AP007231.2| Oryza sativa (japonica cultivar-group) geno... 42 0.23
gb|AACV01003133.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01003332.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01006503.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01007989.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01010538.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01014530.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01014855.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01014957.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01015038.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01015419.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01015881.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01016992.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01021506.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01022580.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01023987.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01024007.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
gb|AACV01025327.1| Oryza sativa (japonica cultivar-group) c... 42 0.23
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 42 0.23
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 42 0.23
ref|NT_107200.1| Oryza sativa (japonica cultivar-group) 42 0.23
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 42 0.23
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 42 0.23
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 42 0.23
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) geno... 42 0.23
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401258.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401223.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromoso... 42 0.23
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.23
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.23
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
sequence
Length = 164179
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 31375 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 31434
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 31435 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 31494
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctcc 358
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 31495 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctca 31554
Query: 359 accaagccctgcac 372
| ||| ||||||||
Sbjct: 31555 agcaaaccctgcac 31568
>gb|AACV01008302.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008302,
whole genome shotgun sequence
Length = 16653
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Minus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 831 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 772
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 771 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 712
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctcc 358
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 711 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctca 652
Query: 359 accaagccctgcac 372
| ||| ||||||||
Sbjct: 651 agcaaaccctgcac 638
>ref|NT_079914.2| Oryza sativa (japonica cultivar-group)
Length = 1404373
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 1271569 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 1271628
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 1271629 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 1271688
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctcc 358
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 1271689 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctca 1271748
Query: 359 accaagccctgcac 372
| ||| ||||||||
Sbjct: 1271749 agcaaaccctgcac 1271762
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 9713898 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 9713957
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 9713958 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 9714017
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctcc 358
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 9714018 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctca 9714077
Query: 359 accaagccctgcac 372
| ||| ||||||||
Sbjct: 9714078 agcaaaccctgcac 9714091
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 8048966 caaaccaaaccaaaccaaaccaaa 8048943
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 8048961 caaaccaaaccaaaccaaaccaaa 8048938
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 8048968 accaaaccaaaccaaaccaaa 8048948
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 8048956 caaaccaaaccaaaccaaacc 8048936
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 5060622 caaaccaaaccaaaccaaacc 5060602
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 36980061 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 36980120
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 36980121 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 36980180
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctcc 358
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 36980181 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctca 36980240
Query: 359 accaagccctgcac 372
| ||| ||||||||
Sbjct: 36980241 agcaaaccctgcac 36980254
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 35315129 caaaccaaaccaaaccaaaccaaa 35315106
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 35315124 caaaccaaaccaaaccaaaccaaa 35315101
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 35315131 accaaaccaaaccaaaccaaa 35315111
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 35315119 caaaccaaaccaaaccaaacc 35315099
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 32326785 caaaccaaaccaaaccaaacc 32326765
Score = 42.1 bits (21), Expect = 0.23
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaaccaaa 38
|||||||||||||||| ||||||||
Sbjct: 11892261 acaaaccaaaccaaacgaaaccaaa 11892237
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 36059938 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 36059997
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 36059998 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 36060057
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctcc 358
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 36060058 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctca 36060117
Query: 359 accaagccctgcac 372
| ||| ||||||||
Sbjct: 36060118 agcaaaccctgcac 36060131
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 34437390 caaaccaaaccaaaccaaaccaaa 34437367
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 34437385 caaaccaaaccaaaccaaaccaaa 34437362
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 34437392 accaaaccaaaccaaaccaaa 34437372
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 34437380 caaaccaaaccaaaccaaacc 34437360
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 31505067 caaaccaaaccaaaccaaacc 31505047
Score = 42.1 bits (21), Expect = 0.23
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaaccaaa 38
|||||||||||||||| ||||||||
Sbjct: 11573457 acaaaccaaaccaaacgaaaccaaa 11573433
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 99.6 bits (50), Expect = 1e-018
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 35969864 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 35969923
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 35969924 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 35969983
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctcc 358
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 35969984 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctca 35970043
Query: 359 accaagccctgcac 372
| ||| ||||||||
Sbjct: 35970044 agcaaaccctgcac 35970057
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 34346918 caaaccaaaccaaaccaaaccaaa 34346895
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 34346913 caaaccaaaccaaaccaaaccaaa 34346890
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 34346920 accaaaccaaaccaaaccaaa 34346900
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 34346908 caaaccaaaccaaaccaaacc 34346888
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 31414551 caaaccaaaccaaaccaaacc 31414531
Score = 42.1 bits (21), Expect = 0.23
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaaccaaa 38
|||||||||||||||| ||||||||
Sbjct: 11576694 acaaaccaaaccaaacgaaaccaaa 11576670
>dbj|AK070637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056J01, full
insert sequence
Length = 2649
Score = 93.7 bits (47), Expect = 7e-017
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 179 agacgaagcagcaagtagagaagaatccgatatccgagcgccatcagtagcagaaccagg 238
|||||||||| || |||||||| || || ||||| | ||||||| | || ||||||
Sbjct: 2302 agacgaagcaacacgtagagaacaacacggtatccaactgccatcacaaacaaaaccagc 2243
Query: 239 aggttcacccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttgg 298
|| || |||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||
Sbjct: 2242 agatttacccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttgg 2183
Query: 299 acaccaggtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctc 357
||||| ||||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 2182 acacctggtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctc 2124
>ref|XM_470502.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2064
Score = 87.7 bits (44), Expect = 4e-015
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 246 cccacttcgcgtttggggaagacgaaatgtcgtacgagcctcgaacggcttggacaccag 305
||||||| ||||||| |||||||| |||||||| ||||| | ||| ||||||||||| |
Sbjct: 2008 cccactttgcgtttgctgaagacgagatgtcgtatgagcccccaactgcttggacacctg 1949
Query: 306 gtatggtcctgatctgtccaacagcaaacgatgtgcccacgtactcgttctc 357
|||| ||||| ||| || || ||||||||||||||||| |||||||||||
Sbjct: 1948 gtatcgtccttatcgcaccgaccgcaaacgatgtgcccacatactcgttctc 1897
>ref|NT_107118.1| Oryza sativa (japonica cultivar-group)
Length = 339677
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 316143 acaaaccaaaccaaaccaaaccaaaga 316169
>gb|AACV01022869.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022869, whole
genome shotgun sequence
Length = 26247
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 2154 acaaaccaaaccaaaccaaaccaaaga 2128
>gb|CH401263.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000100 genomic
scaffold, whole genome shotgun sequence
Length = 6309838
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 1837518 acaaaccaaaccaaaccaaaccaaaga 1837544
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 9692562 acaaaccaaaccaaaccaaaccaaaga 9692588
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 5478366 accaaaccaaaccaaaccaaa 5478386
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 10692297 acaaaccaaaccaaaccaaaccaaaga 10692323
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 5638130 accaaaccaaaccaaaccaaa 5638150
>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0077O14, complete sequence
Length = 124915
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 23535 acaaaccaaaccaaaccaaaccaaaga 23509
>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0044M15,
complete sequence
Length = 144568
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 125533 acaaaccaaaccaaaccaaaccaaaga 125507
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 10772349 acaaaccaaaccaaaccaaaccaaaga 10772375
Score = 54.0 bits (27), Expect = 6e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaaaccaaaga 40
|||||||||||||||||||||||||||
Sbjct: 10763945 acaaaccaaaccaaaccaaaccaaaga 10763971
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 5704607 accaaaccaaaccaaaccaaa 5704627
>gb|AQ579032.1|AQ579032 nbxb0093H12f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0093H12f, DNA sequence
Length = 683
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 510 caaaccaaaccaaaccaaaccaaa 487
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 505 caaaccaaaccaaaccaaaccaaa 482
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 512 accaaaccaaaccaaaccaaa 492
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 500 caaaccaaaccaaaccaaacc 480
>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete
sequence
Length = 115393
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 102781 caaaccaaaccaaaccaaaccaaa 102804
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 102776 caaaccaaaccaaaccaaaccaaa 102799
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 102786 caaaccaaaccaaaccaaacc 102806
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 102774 accaaaccaaaccaaaccaaa 102794
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 4353755 caaaccaaaccaaaccaaaccaaa 4353778
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 4353750 caaaccaaaccaaaccaaaccaaa 4353773
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 5246350 caaaccaaaccaaaccaaaccaa 5246328
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 6289379 accaaaccaaaccaaaccaaa 6289359
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 4353760 caaaccaaaccaaaccaaacc 4353780
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 17 aaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||
Sbjct: 1431042 aaccaaaccaaaccaaaccaa 1431022
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0051O02
Length = 169532
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 142896 caaaccaaaccaaaccaaaccaaa 142919
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 142891 caaaccaaaccaaaccaaaccaaa 142914
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 142901 caaaccaaaccaaaccaaacc 142921
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0065C04
Length = 165270
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 12031 caaaccaaaccaaaccaaaccaaa 12054
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 12026 caaaccaaaccaaaccaaaccaaa 12049
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 12036 caaaccaaaccaaaccaaacc 12056
>gb|AACV01008189.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008189, whole
genome shotgun sequence
Length = 44992
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 12418 caaaccaaaccaaaccaaaccaaa 12441
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 12413 caaaccaaaccaaaccaaaccaaa 12436
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 12423 caaaccaaaccaaaccaaacc 12443
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 12411 accaaaccaaaccaaaccaaa 12431
>gb|AACV01014740.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014740, whole
genome shotgun sequence
Length = 50983
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 42029 caaaccaaaccaaaccaaaccaaa 42006
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 42024 caaaccaaaccaaaccaaaccaaa 42001
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 42019 caaaccaaaccaaaccaaacc 41999
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 1004115 caaaccaaaccaaaccaaaccaaa 1004092
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 1004110 caaaccaaaccaaaccaaaccaaa 1004087
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 1004117 accaaaccaaaccaaaccaaa 1004097
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 1004105 caaaccaaaccaaaccaaacc 1004085
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 8219733 caaaccaaaccaaaccaaaccaaa 8219756
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 8219728 caaaccaaaccaaaccaaaccaaa 8219751
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 9189616 caaaccaaaccaaaccaaaccaa 9189594
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 11591295 accaaaccaaaccaaaccaaa 11591315
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 10202348 accaaaccaaaccaaaccaaa 10202328
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 8219738 caaaccaaaccaaaccaaacc 8219758
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 17 aaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||
Sbjct: 5286863 aaccaaaccaaaccaaaccaa 5286843
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 25918470 caaaccaaaccaaaccaaaccaaa 25918493
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 25918465 caaaccaaaccaaaccaaaccaaa 25918488
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 26888353 caaaccaaaccaaaccaaaccaa 26888331
Score = 44.1 bits (22), Expect = 0.058
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacca 36
||||||||||||||||||||||
Sbjct: 9710105 caaaccaaaccaaaccaaacca 9710084
Score = 44.1 bits (22), Expect = 0.058
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaaccaa 37
||||||||||||||||||||||
Sbjct: 1480475 aaaccaaaccaaaccaaaccaa 1480454
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 29290032 accaaaccaaaccaaaccaaa 29290052
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 27901085 accaaaccaaaccaaaccaaa 27901065
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 25918475 caaaccaaaccaaaccaaacc 25918495
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 17 aaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||
Sbjct: 22985600 aaccaaaccaaaccaaaccaa 22985580
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 26888270 caaaccaaaccaaaccaaaccaaa 26888293
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 26888265 caaaccaaaccaaaccaaaccaaa 26888288
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 27780865 caaaccaaaccaaaccaaaccaa 27780843
Score = 44.1 bits (22), Expect = 0.058
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacca 36
||||||||||||||||||||||
Sbjct: 9725561 caaaccaaaccaaaccaaacca 9725540
Score = 44.1 bits (22), Expect = 0.058
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaaccaa 37
||||||||||||||||||||||
Sbjct: 1538636 aaaccaaaccaaaccaaaccaa 1538615
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 30257710 accaaaccaaaccaaaccaaa 30257730
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 28823894 accaaaccaaaccaaaccaaa 28823874
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 26888275 caaaccaaaccaaaccaaacc 26888295
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 17 aaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||
Sbjct: 23965557 aaccaaaccaaaccaaaccaa 23965537
>gb|CA999925.1|CA999925 S234L_E07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 771
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaacca 36
|||||||||||||||||||||||
Sbjct: 80 acaaaccaaaccaaaccaaacca 58
>gb|CF339971.1|CF339971 RCL1--06-I15.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--06-I15, mRNA sequence
Length = 667
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaacca 36
|||||||||||||||||||||||
Sbjct: 376 acaaaccaaaccaaaccaaacca 354
>dbj|AP003997.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1113_D09,
*** SEQUENCING IN PROGRESS ***
Length = 103234
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaaccaaa 38
|||||||||||||||||||||||
Sbjct: 46064 aaaccaaaccaaaccaaaccaaa 46042
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaacca 36
|||||||||||||||||||||
Sbjct: 3683 aaaccaaaccaaaccaaacca 3663
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaacca 36
|||||||||||||||||||||
Sbjct: 2436 aaaccaaaccaaaccaaacca 2416
>dbj|AP004265.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone P0027F01, ***
SEQUENCING IN PROGRESS ***
Length = 137007
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 88624 caaaccaaaccaaaccaaaccaa 88602
>dbj|AP004319.1| Oryza sativa (japonica cultivar-group) chromosome 1 clone B1017B03, ***
SEQUENCING IN PROGRESS ***
Length = 145847
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 24264 caaaccaaaccaaaccaaaccaa 24242
Score = 44.1 bits (22), Expect = 0.058
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 17 aaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||
Sbjct: 24267 aaccaaaccaaaccaaaccaaa 24246
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0482D04
Length = 144583
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaaccaaaccaaaccaaaccaaa 38
|||||||||||||||||||||||
Sbjct: 104056 aaaccaaaccaaaccaaaccaaa 104078
>dbj|AK102531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096E13, full
insert sequence
Length = 2237
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaacca 36
|||||||||||||||||||||||
Sbjct: 388 acaaaccaaaccaaaccaaacca 366
>dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124L19,
full insert sequence
Length = 3731
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 41 caaaccaaaccaaaccaaaccaa 63
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
sequence
Length = 144191
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaaccaaaccaaaccaaaccaaa 38
|||||||||||||||||||||||
Sbjct: 93153 aaaccaaaccaaaccaaaccaaa 93175
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 93157 caaaccaaaccaaaccaaacc 93177
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0527E02
Length = 176826
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaaacca 36
|||||||||||||||||||||||
Sbjct: 23074 acaaaccaaaccaaaccaaacca 23096
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11,
complete sequence
Length = 112796
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 34324 caaaccaaaccaaaccaaaccaa 34302
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 34326 accaaaccaaaccaaaccaaa 34306
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0470D12
Length = 157248
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaaccaaa 38
|||||||||||||||||||||||
Sbjct: 82796 aaaccaaaccaaaccaaaccaaa 82774
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaacca 36
|||||||||||||||||||||
Sbjct: 40415 aaaccaaaccaaaccaaacca 40395
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0453E05
Length = 137364
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 109525 caaaccaaaccaaaccaaaccaa 109547
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1579_C03
Length = 122851
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 31167 caaaccaaaccaaaccaaaccaa 31189
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18,
complete sequence
Length = 156643
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 143403 caaaccaaaccaaaccaaaccaa 143381
Score = 42.1 bits (21), Expect = 0.23
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaaa 38
|||||||||||||||||||||
Sbjct: 143405 accaaaccaaaccaaaccaaa 143385
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0710B08
Length = 186991
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 83374 caaaccaaaccaaaccaaaccaa 83352
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1153E06
Length = 174588
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 130120 caaaccaaaccaaaccaaaccaa 130098
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBa0090K04
Length = 152556
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaacca 36
|||||||||||||||||||||||
Sbjct: 105706 acaaaccaaaccaaaccaaacca 105684
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0704D04
Length = 147638
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaacca 36
|||||||||||||||||||||||
Sbjct: 137588 acaaaccaaaccaaaccaaacca 137566
>gb|AACV01001797.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001797, whole
genome shotgun sequence
Length = 12553
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 acaaaccaaaccaaaccaaacca 36
|||||||||||||||||||||||
Sbjct: 12314 acaaaccaaaccaaaccaaacca 12292
>gb|AACV01002976.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002976, whole
genome shotgun sequence
Length = 17080
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaaccaaaccaaaccaaaccaaa 38
|||||||||||||||||||||||
Sbjct: 5817 aaaccaaaccaaaccaaaccaaa 5839
>gb|AACV01003055.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003055, whole
genome shotgun sequence
Length = 32070
Score = 46.1 bits (23), Expect = 0.015
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 17537 caaaccaaaccaaaccaaaccaa 17515
Score = 44.1 bits (22), Expect = 0.058
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 17 aaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||
Sbjct: 17540 aaccaaaccaaaccaaaccaaa 17519
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 532,761
Number of Sequences: 438736
Number of extensions: 532761
Number of successful extensions: 17017
Number of sequences better than 0.5: 250
Number of HSP's better than 0.5 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12544
Number of HSP's gapped (non-prelim): 3777
length of query: 412
length of database: 2,800,419,916
effective HSP length: 20
effective length of query: 392
effective length of database: 2,791,645,196
effective search space: 1094324916832
effective search space used: 1094324916832
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)