BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023825.2.1
(1094 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_190260.1| Oryza sativa (japonica cultivar-group), p... 599 e-168
ref|XM_475503.1| Oryza sativa (japonica cultivar-group), p... 450 e-124
dbj|AK060834.1| Oryza sativa (japonica cultivar-group) cDNA... 442 e-121
gb|CB652977.1|CB652977 OSJNEc03I24.f OSJNEc Oryza sativa (j... 426 e-116
gb|CB656617.1|CB656617 OSJNEc11D03.f OSJNEc Oryza sativa (j... 426 e-116
gb|CB656623.1|CB656623 OSJNEc11D06.f OSJNEc Oryza sativa (j... 426 e-116
gb|CB656752.1|CB656752 OSJNEc11H09.f OSJNEc Oryza sativa (j... 426 e-116
gb|CB645144.1|CB645144 OSJNEb06K17.r OSJNEb Oryza sativa (j... 408 e-111
gb|CB650401.1|CB650401 OSJNEb14N05.r OSJNEb Oryza sativa (j... 398 e-108
gb|CB655819.1|CB655819 OSJNEc09J08.r OSJNEc Oryza sativa (j... 398 e-108
gb|CB660104.1|CB660104 OSJNEd01J08.r OSJNEd Oryza sativa (j... 394 e-107
gb|CB656657.1|CB656657 OSJNEc11E05.f OSJNEc Oryza sativa (j... 355 3e-095
gb|CB656618.1|CB656618 OSJNEc11D03.r OSJNEc Oryza sativa (j... 333 1e-088
gb|CB666943.1|CB666943 OSJNEd14A23.f OSJNEd Oryza sativa (j... 331 5e-088
dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA... 313 1e-082
gb|CB656624.1|CB656624 OSJNEc11D06.r OSJNEc Oryza sativa (j... 311 4e-082
gb|CB674097.1|CB674097 OSJNEe08P21.r OSJNEe Oryza sativa (j... 289 2e-075
gb|CB666944.1|CB666944 OSJNEd14A23.r OSJNEd Oryza sativa (j... 260 1e-066
gb|CB656753.1|CB656753 OSJNEc11H09.r OSJNEc Oryza sativa (j... 226 2e-056
gb|CB645143.1|CB645143 OSJNEb06K17.f OSJNEb Oryza sativa (j... 222 3e-055
gb|CB655818.1|CB655818 OSJNEc09J08.f OSJNEc Oryza sativa (j... 218 5e-054
gb|CB656225.1|CB656225 OSJNEc10F02.r OSJNEc Oryza sativa (j... 208 5e-051
gb|CB666963.1|CB666963 OSJNEd14B09.r OSJNEd Oryza sativa (j... 196 2e-047
gb|CB669732.1|CB669732 OSJNEe02H04.r OSJNEe Oryza sativa (j... 196 2e-047
gb|CB651467.1|CB651467 OSJNEb16G24.f OSJNEb Oryza sativa (j... 163 2e-037
gb|CB656658.1|CB656658 OSJNEc11E05.r OSJNEc Oryza sativa (j... 157 2e-035
gb|CB666962.1|CB666962 OSJNEd14B09.f OSJNEd Oryza sativa (j... 155 6e-035
gb|CB674096.1|CB674096 OSJNEe08P21.f OSJNEe Oryza sativa (j... 147 1e-032
gb|CB680995.1|CB680995 OSJNEf06L02.r OSJNEf Oryza sativa (j... 137 1e-029
gb|CA754885.1|CA754885 BR030007002_BR030_H09_72_079.ab1 OA ... 123 2e-025
gb|CB650400.1|CB650400 OSJNEb14N05.f OSJNEb Oryza sativa (j... 105 5e-020
dbj|AP003316.4| Oryza sativa (japonica cultivar-group) geno... 105 5e-020
gb|AACV01002843.1| Oryza sativa (japonica cultivar-group) c... 105 5e-020
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 105 5e-020
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 105 5e-020
dbj|AP003407.3| Oryza sativa (japonica cultivar-group) geno... 105 5e-020
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 105 5e-020
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 105 5e-020
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 105 5e-020
gb|CB663833.1|CB663833 OSJNEd09D13.r OSJNEd Oryza sativa (j... 100 3e-018
gb|AC108522.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|AC129719.2| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|AACV01012526.1| Oryza sativa (japonica cultivar-group) c... 94 2e-016
ref|NT_107215.1| Oryza sativa (japonica cultivar-group) 94 2e-016
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 94 2e-016
gb|AQ839863.1|AQ839863 nbxb0049B24r CUGI Rice BAC Library O... 88 1e-014
gb|CB660103.1|CB660103 OSJNEd01J08.f OSJNEd Oryza sativa (j... 86 5e-014
gb|CB681050.1|CB681050 OSJNEf06N02.r OSJNEf Oryza sativa (j... 80 3e-012
gb|AY873408.1|AY873408 04ET3_373_A_009_042_032B06 Oryza sat... 74 2e-010
gb|CA999388.1|CA999388 S234H_B03 Rice cold stress germinati... 50 0.003
dbj|AP004990.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP005169.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
gb|AACV01016431.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.16
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.16
>ref|NM_190260.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1278
Score = 599 bits (302), Expect = e-168
Identities = 461/514 (89%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattgggatgacaga 77
||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 631 ctccctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgggatgacaga 690
Query: 78 gaatatattgaagatcctgatgaagttaagccagagggctatgattctatcccaaaacag 137
||||||||||| ||||| |||| |||||| |||||||||||||||||||| ||||| ||
Sbjct: 691 gaatatattgaggatccagatgcagttaaaccagagggctatgattctattccaaaggag 750
Query: 138 attcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatggaatatgg 197
||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 751 attcctgatccaaaagacaaaaagcctgacacgtgggatgatgatgatgatggcatatgg 810
Query: 198 aagcccagaatggtatcaaatccagcatacaagggaccttggaaacgcaagagaattaaa 257
||||| |||||| || |||||||||||||||||||||| ||||| ||||||| ||| ||
Sbjct: 811 aagcctagaatgataccaaatccagcatacaagggaccatggaagcgcaagaaaatcaag 870
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccagagtttgaggat 317
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 871 aatcctaactacaagggtaaatggaagatcccatggattgataatccagagtttgaggat 930
Query: 318 gatccagatctttatgtgctgaagcctttgaagtatattggaattgaagtttggcaggta 377
|||||||| || ||||||||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 931 gatccagacctatatgtgctgaaacccttgaaatatattggaattgaggtttggcaggta 990
Query: 378 aaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgcaagaaag 437
|| |||||||| ||||| |||||||| || |||||||| || || || |||||||||||
Sbjct: 991 aaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgcaagaaaa 1050
Query: 438 gttgttgaggaaacttggggtgcaaatagggaggctgaaaaggaagcttttgaagaagct 497
| || ||||||||| ||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 1051 gctgctgaggaaacatggggtgcaaacagggaggccgaaaaagaggcttttgaagaagct 1110
Query: 498 gaaaaggagaggaaagctagggaggatagggaag 531
|| ||||||||||||||||| ||||||| |||||
Sbjct: 1111 gagaaggagaggaaagctagagaggataaggaag 1144
>ref|XM_475503.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1407
Score = 450 bits (227), Expect = e-124
Identities = 398/455 (87%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 676 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 735
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 736 tctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 795
Query: 183 gaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaa 242
|| ||||| |||||||||| |||||| || | ||||||| ||||||||||| |||||||
Sbjct: 796 gatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaa 855
Query: 243 cgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataat 302
||||||| |||||| || |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 856 cgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataat 915
Query: 303 ccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaatt 362
||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | ||||||
Sbjct: 916 ccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaatt 975
Query: 363 gaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccct 422
|| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 976 gaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccg 1035
Query: 423 gagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaaggaa 482
||||||||||||| |||||||| ||| | ||| |||||||| ||||||||||||||
Sbjct: 1036 gagtatgcaagaagtgttgttgatgaagttagggctgcaaataaagaggctgaaaaggag 1095
Query: 483 gcttttgaagaagctgaaaaggagaggaaagctag 517
|| || || || ||||||||| |||||| |||||
Sbjct: 1096 gccttcgaggaggctgaaaagcggaggaaggctag 1130
>dbj|AK060834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C08, full
insert sequence
Length = 1481
Score = 442 bits (223), Expect = e-121
Identities = 397/455 (87%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 498 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 557
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 558 tctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 617
Query: 183 gaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaa 242
|| ||||| |||||||||| |||||| || | ||||||| ||||||||||| |||||||
Sbjct: 618 gatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaa 677
Query: 243 cgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataat 302
||||||| |||||| || |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 678 cgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataat 737
Query: 303 ccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaatt 362
||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | ||||||
Sbjct: 738 ccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaatt 797
Query: 363 gaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccct 422
|| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 798 gaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccg 857
Query: 423 gagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaaggaa 482
||||||||||||| ||||| || ||| | ||| |||||||| ||||||||||||||
Sbjct: 858 gagtatgcaagaagtgttgtcgatgaagttagggctgcaaataaagaggctgaaaaggag 917
Query: 483 gcttttgaagaagctgaaaaggagaggaaagctag 517
|| || || || ||||||||| |||||| |||||
Sbjct: 918 gccttcgaggaggctgaaaagcggaggaaggctag 952
>gb|CB652977.1|CB652977 OSJNEc03I24.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc03I24 5', mRNA sequence
Length = 796
Score = 426 bits (215), Expect = e-116
Identities = 341/383 (89%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 409 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 468
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 469 tctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 528
Query: 183 gaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaa 242
|| ||||| |||||||||| |||||| || | ||||||| ||||||||||| |||||||
Sbjct: 529 gatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaa 588
Query: 243 cgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataat 302
||||||| |||||| || |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 589 cgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataat 648
Query: 303 ccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaatt 362
||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | ||||||
Sbjct: 649 ccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaatt 708
Query: 363 gaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccct 422
|| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 709 gaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccg 768
Query: 423 gagtatgcaagaaaggttgttga 445
||||||||||||| ||||||||
Sbjct: 769 gagtatgcaagaagtgttgttga 791
>gb|CB656617.1|CB656617 OSJNEc11D03.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11D03 5', mRNA sequence
Length = 768
Score = 426 bits (215), Expect = e-116
Identities = 341/383 (89%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 444
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 445 tctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 504
Query: 183 gaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaa 242
|| ||||| |||||||||| |||||| || | ||||||| ||||||||||| |||||||
Sbjct: 505 gatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaa 564
Query: 243 cgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataat 302
||||||| |||||| || |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 565 cgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataat 624
Query: 303 ccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaatt 362
||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | ||||||
Sbjct: 625 ccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaatt 684
Query: 363 gaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccct 422
|| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 685 gaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccg 744
Query: 423 gagtatgcaagaaaggttgttga 445
||||||||||||| ||||||||
Sbjct: 745 gagtatgcaagaagtgttgttga 767
>gb|CB656623.1|CB656623 OSJNEc11D06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11D06 5', mRNA sequence
Length = 794
Score = 426 bits (215), Expect = e-116
Identities = 341/383 (89%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 444
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 445 tctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 504
Query: 183 gaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaa 242
|| ||||| |||||||||| |||||| || | ||||||| ||||||||||| |||||||
Sbjct: 505 gatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaa 564
Query: 243 cgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataat 302
||||||| |||||| || |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 565 cgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataat 624
Query: 303 ccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaatt 362
||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | ||||||
Sbjct: 625 ccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaatt 684
Query: 363 gaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccct 422
|| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 685 gaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccg 744
Query: 423 gagtatgcaagaaaggttgttga 445
||||||||||||| ||||||||
Sbjct: 745 gagtatgcaagaagtgttgttga 767
>gb|CB656752.1|CB656752 OSJNEc11H09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H09 5', mRNA sequence
Length = 786
Score = 426 bits (215), Expect = e-116
Identities = 341/383 (89%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 444
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 445 tctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 504
Query: 183 gaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaa 242
|| ||||| |||||||||| |||||| || | ||||||| ||||||||||| |||||||
Sbjct: 505 gatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaa 564
Query: 243 cgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataat 302
||||||| |||||| || |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 565 cgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataat 624
Query: 303 ccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaatt 362
||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | ||||||
Sbjct: 625 ccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaatt 684
Query: 363 gaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccct 422
|| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 685 gaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccg 744
Query: 423 gagtatgcaagaaaggttgttga 445
||||||||||||| ||||||||
Sbjct: 745 gagtatgcaagaagtgttgttga 767
>gb|CB645144.1|CB645144 OSJNEb06K17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06K17 3', mRNA sequence
Length = 804
Score = 408 bits (206), Expect = e-111
Identities = 326/366 (89%)
Strand = Plus / Minus
Query: 166 acacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatccagcat 225
|||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||||||||
Sbjct: 804 acacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatccagcat 745
Query: 226 acaagggaccttggaaacgcaagagaattaaaaatcctaactacaagggtaaatggaaga 285
|||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||||||
Sbjct: 744 acaagggaccatggaagcgcaagaaaatcaagaatcctaactacaagggtaaatggaaga 685
Query: 286 ccccatggatcgataatccagagtttgaggatgatccagatctttatgtgctgaagcctt 345
||||||||| ||||||||||||||||||||||||||||| || ||||||||||| || |
Sbjct: 684 tcccatggattgataatccagagtttgaggatgatccagacctatatgtgctgaaaccct 625
Query: 346 tgaagtatattggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattc 405
|||| |||||||||||||| |||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 624 tgaaatatattggaattgaggtttggcaggtaaaggctggttcggtttttgacaacatcc 565
Query: 406 tgatttgtgatgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaata 465
| |||||||| || || || ||||||||||| | || ||||||||| ||||||||||| |
Sbjct: 564 tcatttgtgacgatccggaatatgcaagaaaagctgctgaggaaacatggggtgcaaaca 505
Query: 466 gggaggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
||||||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 504 gggaggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 445
Query: 526 gggaag 531
|||||
Sbjct: 444 aggaag 439
>gb|CB650401.1|CB650401 OSJNEb14N05.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14N05 3', mRNA sequence
Length = 802
Score = 398 bits (201), Expect = e-108
Identities = 318/357 (89%)
Strand = Plus / Minus
Query: 175 atgaagatgaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggac 234
|||| ||||| ||||| ||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 802 atgatgatgatgatggcatatggaagcctagaatgataccaaatccagcatacaagggac 743
Query: 235 cttggaaacgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatgga 294
| ||||| ||||||| ||| || |||||||||||||||||||||||||||| ||||||||
Sbjct: 742 catggaagcgcaagaaaatcaagaatcctaactacaagggtaaatggaagatcccatgga 683
Query: 295 tcgataatccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtata 354
| ||||||||||||||||||||||||||||| || ||||||||||| || ||||| ||||
Sbjct: 682 ttgataatccagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatata 623
Query: 355 ttggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtg 414
|||||||||| |||||||||||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 622 ttggaattgaggtttggcaggtaaaggctggttcggtttttgacaacatcctcatttgtg 563
Query: 415 atgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctg 474
| || || || ||||||||||| | || ||||||||| ||||||||||| |||||||| |
Sbjct: 562 acgatccggaatatgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggccg 503
Query: 475 aaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggatagggaag 531
|||| || ||||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 502 aaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataaggaag 446
>gb|CB655819.1|CB655819 OSJNEc09J08.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09J08 3', mRNA sequence
Length = 857
Score = 398 bits (201), Expect = e-108
Identities = 318/357 (89%)
Strand = Plus / Minus
Query: 175 atgaagatgaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggac 234
|||| ||||| ||||| ||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 857 atgatgatgatgatggcatatggaagcctagaatgataccaaatccagcatacaagggac 798
Query: 235 cttggaaacgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatgga 294
| ||||| ||||||| ||| || |||||||||||||||||||||||||||| ||||||||
Sbjct: 797 catggaagcgcaagaaaatcaagaatcctaactacaagggtaaatggaagatcccatgga 738
Query: 295 tcgataatccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtata 354
| ||||||||||||||||||||||||||||| || ||||||||||| || ||||| ||||
Sbjct: 737 ttgataatccagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatata 678
Query: 355 ttggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtg 414
|||||||||| |||||||||||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 677 ttggaattgaggtttggcaggtaaaggctggttcggtttttgacaacatcctcatttgtg 618
Query: 415 atgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctg 474
| || || || ||||||||||| | || ||||||||| ||||||||||| |||||||| |
Sbjct: 617 acgatccggaatatgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggccg 558
Query: 475 aaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggatagggaag 531
|||| || ||||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 557 aaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataaggaag 501
>gb|CB660104.1|CB660104 OSJNEd01J08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01J08 3', mRNA sequence
Length = 861
Score = 394 bits (199), Expect = e-107
Identities = 313/351 (89%)
Strand = Plus / Minus
Query: 181 atgaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttgga 240
|||| ||||| ||||||||||| |||||| || |||||||||||||||||||||| ||||
Sbjct: 861 atgatgatggcatatggaagcctagaatgataccaaatccagcatacaagggaccatgga 802
Query: 241 aacgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgata 300
| ||||||| ||| || |||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 801 agcgcaagaaaatcaagaatcctaactacaagggtaaatggaagatcccatggattgata 742
Query: 301 atccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaa 360
||||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||
Sbjct: 741 atccagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaa 682
Query: 361 ttgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgacc 420
|||| |||||||||||||| |||||||| ||||| |||||||| || |||||||| || |
Sbjct: 681 ttgaggtttggcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatc 622
Query: 421 ctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaagg 480
| || ||||||||||| | || ||||||||| ||||||||||| |||||||| ||||| |
Sbjct: 621 cggaatatgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggccgaaaaag 562
Query: 481 aagcttttgaagaagctgaaaaggagaggaaagctagggaggatagggaag 531
| ||||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 561 aggcttttgaagaagctgagaaggagaggaaagctagagaggataaggaag 511
>gb|CB656657.1|CB656657 OSJNEc11E05.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11E05 5', mRNA sequence
Length = 735
Score = 355 bits (179), Expect = 3e-095
Identities = 308/351 (87%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 385 gattgggatgacagggaatatattgaatatcctgatgaagttaaaccagagggctatgac 444
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 445 tctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 504
Query: 183 gaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttggaaa 242
|| ||||| |||||||||| |||||| || | |||||| ||||||||||| |||||||
Sbjct: 505 gatgatggtgtatggaagcctagaatgataccgaatccataatacaagggacgttggaaa 564
Query: 243 cgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataat 302
||||||| |||||| || |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 565 cgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataat 624
Query: 303 ccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaatt 362
||||| |||||||| || ||||| || |||||||||| |||||| ||||| | ||||||
Sbjct: 625 ccagaatttgaggacgacccagacctatatgtgctgacacctttgcagtatgtgggaatt 684
Query: 363 gaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgt 413
|| |||||||| || |||||||||||| |||| ||||||||| ||||||||
Sbjct: 685 gaggtttggcacgtgaaagctggttcaatttttgacaacattttgatttgt 735
>gb|CB656618.1|CB656618 OSJNEc11D03.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11D03 3', mRNA sequence
Length = 843
Score = 333 bits (168), Expect = 1e-088
Identities = 318/368 (86%)
Strand = Plus / Minus
Query: 150 aaggacaaaaagcctgacacatgggatgaagatgaggatggaatatggaagcccagaatg 209
||||||||||||||||| |||||||||| ||||| ||||| |||||||||| ||||||
Sbjct: 841 aaggacaaaaagcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatg 782
Query: 210 gtatcaaatccagcatacaagggaccttggaaacgcaagagaattaaaaatcctaactac 269
|| | ||||||| ||||||||||| |||||||||||||| |||||| || |||||||||
Sbjct: 781 ataccgaatccagaatacaagggacgttggaaacgcaagaaaattaagaaccctaactac 722
Query: 270 aagggtaaatggaagaccccatggatcgataatccagagtttgaggatgatccagatctt 329
||||| |||||||||| ||||||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 721 aagggaaaatggaagatcccatggattgataatccagaatttgaggacgacccagaccta 662
Query: 330 tatgtgctgaagcctttgaagtatattggaattgaagtttggcaggtaaaagctggttca 389
||||||||||| |||||| ||||| | |||||||| ||||||||||| ||||||||||||
Sbjct: 661 tatgtgctgaaacctttgcagtatgtgggaattgaggtttggcaggtgaaagctggttca 602
Query: 390 gttttcgacaacattctgatttgtgatgaccctgagtatgcaagaaaggttgttgaggaa 449
||||| ||||||||| |||||||||| ||||| ||||||||||||| |||||||| |||
Sbjct: 601 gtttttgacaacattttgatttgtgacgacccggagtatgcaagaagtgttgttgatgaa 542
Query: 450 acttggggtgcaaatagggaggctgaaaaggaagcttttgaagaagctgaaaaggagagg 509
| ||| |||||||| |||||||||||||| || || || || ||||||||| ||||
Sbjct: 541 gttagggctgcaaataaagaggctgaaaaggaggccttcgaggaggctgaaaagcggagg 482
Query: 510 aaagctag 517
|| |||||
Sbjct: 481 aaggctag 474
>gb|CB666943.1|CB666943 OSJNEd14A23.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14A23 5', mRNA sequence
Length = 793
Score = 331 bits (167), Expect = 5e-088
Identities = 263/295 (89%)
Strand = Plus / Plus
Query: 237 tggaaacgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatc 296
||||| ||||||| ||| || |||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tggaagcgcaagaaaatcaagaatcctaactacaagggtaaatggaagatcccatggatt 60
Query: 297 gataatccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatatt 356
||||||||||||||||||||||||||||| || ||||||||||| || ||||| ||||||
Sbjct: 61 gataatccagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatatt 120
Query: 357 ggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgat 416
|||||||| |||||||||||||| |||||||| ||||| |||||||| || ||||||||
Sbjct: 121 ggaattgaggtttggcaggtaaaggctggttcggtttttgacaacatcctcatttgtgac 180
Query: 417 gaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaa 476
|| || || ||||||||||| | || ||||||||| ||||||||||| |||||||| |||
Sbjct: 181 gatccggaatatgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggccgaa 240
Query: 477 aaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggatagggaag 531
|| || ||||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 241 aaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataaggaag 295
>dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B02, full
insert sequence
Length = 1784
Score = 313 bits (158), Expect = 1e-082
Identities = 245/274 (89%)
Strand = Plus / Plus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccagagtttgaggat 317
|||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct: 1011 aatcctaactacaagggtaaatggaagatcccatggattggtaatccagagtttgaggat 1070
Query: 318 gatccagatctttatgtgctgaagcctttgaagtatattggaattgaagtttggcaggta 377
|||||||| || ||||||||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 1071 gatccagacctatatgtgctgaaacccttgaaatatattggaattgaggtttggcaggta 1130
Query: 378 aaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgcaagaaag 437
|| |||||||| ||||| |||||||| || |||||||| || || || |||||||||||
Sbjct: 1131 aaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgcaagaaaa 1190
Query: 438 gttgttgaggaaacttggggtgcaaatagggaggctgaaaaggaagcttttgaagaagct 497
| || ||||||||| ||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 1191 gctgctgaggaaacatggggtgcaaacagggaggccgaaaaagaggcttttgaagaagct 1250
Query: 498 gaaaaggagaggaaagctagggaggatagggaag 531
|| ||||||||||||||||| ||||||| |||||
Sbjct: 1251 gagaaggagaggaaagctagagaggataaggaag 1284
Score = 283 bits (143), Expect = 1e-073
Identities = 209/231 (90%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattgggatgacaga 77
||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 686 ctccctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgggatgacaga 745
Query: 78 gaatatattgaagatcctgatgaagttaagccagagggctatgattctatcccaaaacag 137
||||||||||| ||||| |||| |||||| |||||||||||||||||||| ||||| ||
Sbjct: 746 gaatatattgaggatccagatgcagttaaaccagagggctatgattctattccaaaggag 805
Query: 138 attcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatggaatatgg 197
||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 806 attcctgatccaaaagacaaaaagcctgacacgtgggatgatgatgatgatggcatatgg 865
Query: 198 aagcccagaatggtatcaaatccagcatacaagggaccttggaaacgcaag 248
||||| |||||| || |||||||||||||||||||||| ||||| ||||||
Sbjct: 866 aagcctagaatgataccaaatccagcatacaagggaccatggaagcgcaag 916
>gb|CB656624.1|CB656624 OSJNEc11D06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11D06 3', mRNA sequence
Length = 831
Score = 311 bits (157), Expect = 4e-082
Identities = 301/349 (86%)
Strand = Plus / Minus
Query: 169 catgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatccagcataca 228
|||||||||| ||||| ||||| |||||||||| |||||| || | ||||||| |||||
Sbjct: 828 catgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatccagaataca 769
Query: 229 agggaccttggaaacgcaagagaattaaaaatcctaactacaagggtaaatggaagaccc 288
|||||| |||||||||||||| |||||| || |||||||||||||| |||||||||| ||
Sbjct: 768 agggacgttggaaacgcaagaaaattaagaaccctaactacaagggaaaatggaagatcc 709
Query: 289 catggatcgataatccagagtttgaggatgatccagatctttatgtgctgaagcctttga 348
||||||| ||||||||||| |||||||| || ||||| || ||||||||||| ||||||
Sbjct: 708 catggattgataatccagaatttgaggacgacccagacctatatgtgctgaaacctttgc 649
Query: 349 agtatattggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctga 408
||||| | |||||||| ||||||||||| ||||||||||||||||| ||||||||| |||
Sbjct: 648 agtatgtgggaattgaggtttggcaggtgaaagctggttcagtttttgacaacattttga 589
Query: 409 tttgtgatgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaataggg 468
||||||| ||||| ||||||||||||| |||||||| ||| | ||| |||||||| |
Sbjct: 588 tttgtgacgacccggagtatgcaagaagtgttgttgatgaagttagggctgcaaataaag 529
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctag 517
||||||||||||| || || || || ||||||||| |||||| |||||
Sbjct: 528 aggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggctag 480
>gb|CB674097.1|CB674097 OSJNEe08P21.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P21 3', mRNA sequence
Length = 893
Score = 289 bits (146), Expect = 2e-075
Identities = 290/338 (85%)
Strand = Plus / Minus
Query: 180 gatgaggatggaatatggaagcccagaatggtatcaaatccagcatacaagggaccttgg 239
||||| ||||| |||| ||||| |||||| || | ||||||| ||||||||||| ||||
Sbjct: 893 gatgatgatggtgtatgaaagcctagaatgataccgaatccagaatacaagggacgttgg 834
Query: 240 aaacgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgat 299
|||||||||| |||||| || |||||||||||||| |||||||||| ||||||||| |||
Sbjct: 833 aaacgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgat 774
Query: 300 aatccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattgga 359
|||||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||
Sbjct: 773 aatccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtggga 714
Query: 360 attgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgac 419
||||| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||
Sbjct: 713 attgaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgac 654
Query: 420 cctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaag 479
|| ||||||||||||| |||||||| ||| | ||| |||||||| ||||||||||||
Sbjct: 653 ccggagtatgcaagaagtgttgttgatgaagttagggctgcaaataaagaggctgaaaag 594
Query: 480 gaagcttttgaagaagctgaaaaggagaggaaagctag 517
|| || || || || ||||||||| |||||| |||||
Sbjct: 593 gaggccttcgaggaggctgaaaagcggaggaaggctag 556
>gb|CB666944.1|CB666944 OSJNEd14A23.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14A23 3', mRNA sequence
Length = 743
Score = 260 bits (131), Expect = 1e-066
Identities = 209/235 (88%)
Strand = Plus / Minus
Query: 297 gataatccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatatt 356
||||||||||||||||||||||||||||| || ||||||||||| || ||||| ||||||
Sbjct: 743 gataatccagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatatt 684
Query: 357 ggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgat 416
|||||||| |||||||||||||| |||||||| ||||| |||||||| || ||||||||
Sbjct: 683 ggaattgaggtttggcaggtaaaggctggttcggtttttgacaacatcctcatttgtgac 624
Query: 417 gaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaa 476
|| || || ||||||||||| | || ||||||||| ||||||||||| |||||||| |||
Sbjct: 623 gatccggaatatgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggccgaa 564
Query: 477 aaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggatagggaag 531
|| || ||||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 563 aaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataaggaag 509
>gb|CB656753.1|CB656753 OSJNEc11H09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H09 3', mRNA sequence
Length = 750
Score = 226 bits (114), Expect = 2e-056
Identities = 225/262 (85%)
Strand = Plus / Minus
Query: 242 acgcaagagaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataa 301
|||||||| |||||| || ||||| |||||||| |||||||||| ||||||||| |||||
Sbjct: 750 acgcaagaaaattaagaaccctaattacaagggaaaatggaagatcccatggattgataa 691
Query: 302 tccagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaat 361
|||||| ||||||| || ||||| || |||||| |||| |||||| ||||| | |||||
Sbjct: 690 tccagaatttgaggtcgacccagacctatatgtgttgaaacctttgcagtatgtgggaat 631
Query: 362 tgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccc 421
||| ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 630 tgaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgaccc 571
Query: 422 tgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaaaagga 481
||||||||||||| |||||||| ||| | ||| |||||||| ||||||||||||||
Sbjct: 570 ggagtatgcaagaagtgttgttgatgaagttagggctgcaaataaagaggctgaaaagga 511
Query: 482 agcttttgaagaagctgaaaag 503
|| ||||| || |||||||||
Sbjct: 510 ggcctttgaggaggctgaaaag 489
>gb|CB645143.1|CB645143 OSJNEb06K17.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06K17 5', mRNA sequence
Length = 842
Score = 222 bits (112), Expect = 3e-055
Identities = 163/180 (90%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattgggatgacaga 77
||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 663 ctccctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgggatgacaga 722
Query: 78 gaatatattgaagatcctgatgaagttaagccagagggctatgattctatcccaaaacag 137
||||||||||| ||||| |||| |||||| |||||||||||||||||||| ||||| ||
Sbjct: 723 gaatatattgaggatccagatgcagttaaaccagagggctatgattctattccaaaggag 782
Query: 138 attcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatggaatatgg 197
||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 783 attcctgatccaaaagacaaaaagcctgacacgtgggatgatgatgatgatggcatatgg 842
>gb|CB655818.1|CB655818 OSJNEc09J08.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09J08 5', mRNA sequence
Length = 827
Score = 218 bits (110), Expect = 5e-054
Identities = 161/178 (90%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattgggatgacaga 77
||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 650 ctccctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgggatgacaga 709
Query: 78 gaatatattgaagatcctgatgaagttaagccagagggctatgattctatcccaaaacag 137
||||||||||| ||||| |||| ||||| |||||||||||||||||||| ||||| ||
Sbjct: 710 gaatatattgaggatccagatgcagttataccagagggctatgattctattccaaaggag 769
Query: 138 attcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatggaatat 195
|||||||||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||
Sbjct: 770 attcctgatccgaaagacaaaaagcctgacacgtgggatgatgatgatgatggcatat 827
>gb|CB656225.1|CB656225 OSJNEc10F02.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10F02 3', mRNA sequence
Length = 824
Score = 208 bits (105), Expect = 5e-051
Identities = 207/241 (85%)
Strand = Plus / Minus
Query: 277 aatggaagaccccatggatcgataatccagagtttgaggatgatccagatctttatgtgc 336
||||||||| ||||||||| ||||||||||| |||||||| || ||||| || |||||||
Sbjct: 824 aatggaagatcccatggattgataatccagaatttgaggacgacccagacctatatgtgc 765
Query: 337 tgaagcctttgaagtatattggaattgaagtttggcaggtaaaagctggttcagttttcg 396
|||| |||||| ||||| | |||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 764 tgaaacctttgcagtatgtgggaattgaggtttggcaggtgaaagctggttcagtttttg 705
Query: 397 acaacattctgatttgtgatgaccctgagtatgcaagaaaggttgttgaggaaacttggg 456
|||||||| |||||||||| ||||| ||||||||||||| |||||||| ||| | |||
Sbjct: 704 acaacattttgatttgtgacgacccggagtatgcaagaagtgttgttgatgaagttaggg 645
Query: 457 gtgcaaatagggaggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagcta 516
|||||||| |||||||||||||| || || || || ||||||||| |||||| ||||
Sbjct: 644 ctgcaaataaagaggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggcta 585
Query: 517 g 517
|
Sbjct: 584 g 584
>gb|CB666963.1|CB666963 OSJNEd14B09.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14B09 3', mRNA sequence
Length = 819
Score = 196 bits (99), Expect = 2e-047
Identities = 198/231 (85%)
Strand = Plus / Minus
Query: 287 cccatggatcgataatccagagtttgaggatgatccagatctttatgtgctgaagccttt 346
||||||||| ||||||||||| |||||||| || ||||| || ||||||||||| |||||
Sbjct: 819 cccatggattgataatccagaatttgaggacgacccagacctatatgtgctgaaaccttt 760
Query: 347 gaagtatattggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattct 406
| ||||| | |||||||| ||||||||||| ||||||||||||||||| ||||||||| |
Sbjct: 759 gcagtatgtgggaattgaggtttggcaggtgaaagctggttcagtttttgacaacatttt 700
Query: 407 gatttgtgatgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatag 466
||||||||| ||||| ||||||||||||| |||||||| ||| | ||| ||||||||
Sbjct: 699 gatttgtgacgacccggagtatgcaagaagtgttgttgatgaagttagggctgcaaataa 640
Query: 467 ggaggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctag 517
|||||||||||||| || || || || ||||||||| |||||| |||||
Sbjct: 639 agaggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggctag 589
>gb|CB669732.1|CB669732 OSJNEe02H04.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02H04 3', mRNA sequence
Length = 764
Score = 196 bits (99), Expect = 2e-047
Identities = 198/231 (85%)
Strand = Plus / Minus
Query: 287 cccatggatcgataatccagagtttgaggatgatccagatctttatgtgctgaagccttt 346
||||||||| ||||||||||| |||||||| || ||||| || ||||||||||| |||||
Sbjct: 760 cccatggattgataatccagaatttgaggacgacccagacctatatgtgctgaaaccttt 701
Query: 347 gaagtatattggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattct 406
| ||||| | |||||||| ||||||||||| ||||||||||||||||| ||||||||| |
Sbjct: 700 gcagtatgtgggaattgaggtttggcaggtgaaagctggttcagtttttgacaacatttt 641
Query: 407 gatttgtgatgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatag 466
||||||||| ||||| ||||||||||||| |||||||| ||| | ||| ||||||||
Sbjct: 640 gatttgtgacgacccggagtatgcaagaagtgttgttgatgaagttagggctgcaaataa 581
Query: 467 ggaggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctag 517
|||||||||||||| || || || || ||||||||| |||||| |||||
Sbjct: 580 agaggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggctag 530
>gb|CB651467.1|CB651467 OSJNEb16G24.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16G24 5', mRNA sequence
Length = 791
Score = 163 bits (82), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattgggatgacaga 77
||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 663 ctccctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgggatgacaga 722
Query: 78 gaatatattgaagatcctgatgaagttaagccagagggctatgattctatcccaaaacag 137
||||||||||| ||||| |||| |||| | |||||||||||||||||||| ||||| ||
Sbjct: 723 gaatatattgaggatccagatgcagttnaaccagagggctatgattctattccaaaggag 782
Query: 138 attcctgat 146
|||||||||
Sbjct: 783 attcctgat 791
>gb|CB656658.1|CB656658 OSJNEc11E05.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11E05 3', mRNA sequence
Length = 755
Score = 157 bits (79), Expect = 2e-035
Identities = 187/223 (83%)
Strand = Plus / Minus
Query: 281 gaagaccccatggatcgataatccagagtttgaggatgatccagatctttatgtgctgaa 340
||||| ||||||||| ||||||||||| ||||||| | |||| || |||||||||||
Sbjct: 755 gaagatcccatggattgataatccagaatttgagggcggcccaggcctatatgtgctgaa 696
Query: 341 gcctttgaagtatattggaattgaagtttggcaggtaaaagctggttcagttttcgacaa 400
|||||| ||||| | |||||||| ||||||||||| ||||||||||||||||| | |||
Sbjct: 695 acctttgcagtatgtgggaattgaggtttggcaggtgaaagctggttcagtttttggcaa 636
Query: 401 cattctgatttgtgatgaccctgagtatgcaagaaaggttgttgaggaaacttggggtgc 460
|||| ||||||||| ||||| ||||||||||||| |||||||| ||| | ||| |||
Sbjct: 635 cattttgatttgtgccgacccggagtatgcaagaagtgttgttgatgaagttagggctgc 576
Query: 461 aaatagggaggctgaaaaggaagcttttgaagaagctgaaaag 503
||||| |||||||||||||| || || || || |||||||||
Sbjct: 575 aaataaagaggctgaaaaggaggccttcgaggaggctgaaaag 533
>gb|CB666962.1|CB666962 OSJNEd14B09.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14B09 5', mRNA sequence
Length = 846
Score = 155 bits (78), Expect = 6e-035
Identities = 112/122 (91%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 726 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 785
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 786 tctattcctaaagagattcctgatcc-aaggacaaaaagcctgagtcatgggatgatgat 844
Query: 183 ga 184
||
Sbjct: 845 ga 846
>gb|CB674096.1|CB674096 OSJNEe08P21.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P21 5', mRNA sequence
Length = 857
Score = 147 bits (74), Expect = 1e-032
Identities = 111/122 (90%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgat 122
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 733 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgac 792
Query: 123 tctatcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagat 182
||||| || || ||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 793 tctattcc-taagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgat 851
Query: 183 ga 184
||
Sbjct: 852 ga 853
>gb|CB680995.1|CB680995 OSJNEf06L02.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06L02 3', mRNA sequence
Length = 772
Score = 137 bits (69), Expect = 1e-029
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 357 ggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctgatttgtgat 416
|||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||
Sbjct: 761 ggaattgaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgac 702
Query: 417 gaccctgagtatgcaagaaaggttgttgaggaaacttggggtgcaaatagggaggctgaa 476
||||| ||||||||||||| |||||||| ||| | ||| |||||||| |||||||||
Sbjct: 701 gacccggagtatgcaagaagtgttgttgatgaagttagggctgcaaataaagaggctgaa 642
Query: 477 aaggaagcttttgaagaagctgaaaaggagaggaaagctag 517
||||| || || || || ||||||||| |||||| |||||
Sbjct: 641 aaggaggccttcgaggaggctgaaaagcggaggaaggctag 601
>gb|CA754885.1|CA754885 BR030007002_BR030_H09_72_079.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030007002_BR030_H09_72_079.ab1 similar to putative
calreticulin [Oryza sativa (japonica cultivar-group)],
mRNA sequence
Length = 642
Score = 123 bits (62), Expect = 2e-025
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 33 attaaggatgttcacgccaaaaggcctaaggattgggatgacagagaatatattgaagat 92
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 541 attaaggatgttcatgccaaaaagcctaaggattgggatgacagagaatatattgaggat 600
Query: 93 cctgatgaagttaagccagagggctatgat 122
|| |||| |||||| |||||||||||||||
Sbjct: 601 ccagatgcagttaa-ccagagggctatgat 629
>gb|CB650400.1|CB650400 OSJNEb14N05.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14N05 5', mRNA sequence
Length = 741
Score = 105 bits (53), Expect = 5e-020
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattgggatgacaga 77
||||||||||| || |||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 663 ctccctcctcgcaagattaaggatgttcatgccaaaaagcctaaggattgcgatgacaga 722
Query: 78 gaatatattgaagatcc 94
||||||||||| |||||
Sbjct: 723 gaatatattgaggatcc 739
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0696G06
Length = 142571
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 90446 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 90387
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 90386 cagcatacaagggaccatggaagcgcaag 90358
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 90093 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 90034
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 90033 aggtttggcaggtaa 90019
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 89933 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 89874
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 89873 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 89833
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 90903 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 90845
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 90263 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 90215
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 89753 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 89697
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 90770 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 90721
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 91024 ctccctcctcgcaagattaaggatgttcatgccaaaa 90988
>gb|AACV01002843.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002843, whole
genome shotgun sequence
Length = 7187
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 4813 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 4872
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 4873 cagcatacaagggaccatggaagcgcaag 4901
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 5166 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 5225
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 5226 aggtttggcaggtaa 5240
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 5326 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 5385
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 5386 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 5426
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 4356 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 4414
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 4996 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 5044
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 5506 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 5562
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 4489 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 4538
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 4235 ctccctcctcgcaagattaaggatgttcatgccaaaa 4271
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 39006330 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 39006271
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 39006270 cagcatacaagggaccatggaagcgcaag 39006242
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 39005977 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 39005918
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 39005917 aggtttggcaggtaa 39005903
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 39005817 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 39005758
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 39005757 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 39005717
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 39006787 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 39006729
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 39006147 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 39006099
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 39005637 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 39005581
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 39006654 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 39006605
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 39006908 ctccctcctcgcaagattaaggatgttcatgccaaaa 39006872
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 13453713 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 13453654
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 13453653 cagcatacaagggaccatggaagcgcaag 13453625
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 13453360 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 13453301
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 13453300 aggtttggcaggtaa 13453286
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 13453200 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 13453141
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 13453140 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 13453100
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 13454170 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 13454112
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 13453530 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 13453482
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 13453020 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 13452964
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 13454037 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 13453988
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 13454291 ctccctcctcgcaagattaaggatgttcatgccaaaa 13454255
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1078G07
Length = 199457
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 198542 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 198483
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 198482 cagcatacaagggaccatggaagcgcaag 198454
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 198189 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 198130
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 198129 aggtttggcaggtaa 198115
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 198029 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 197970
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 197969 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 197929
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 198999 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 198941
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 198359 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 198311
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 197849 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 197793
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 198866 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 198817
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 199120 ctccctcctcgcaagattaaggatgttcatgccaaaa 199084
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 13173828 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 13173769
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 13173768 cagcatacaagggaccatggaagcgcaag 13173740
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 13173475 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 13173416
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 13173415 aggtttggcaggtaa 13173401
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 13173315 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 13173256
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 13173255 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 13173215
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 13174285 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 13174227
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 13173645 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 13173597
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 13173135 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 13173079
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 13174152 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 13174103
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 13174406 ctccctcctcgcaagattaaggatgttcatgccaaaa 13174370
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 38375549 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 38375490
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 38375489 cagcatacaagggaccatggaagcgcaag 38375461
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 38375196 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 38375137
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 38375136 aggtttggcaggtaa 38375122
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 38375036 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 38374977
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 38374976 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 38374936
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 38376006 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 38375948
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 38375366 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 38375318
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 38374856 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 38374800
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 38375873 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 38375824
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 38376127 ctccctcctcgcaagattaaggatgttcatgccaaaa 38376091
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 105 bits (53), Expect = 5e-020
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
|||||||||| |||||||| ||||| ||||| ||||||||||| |||||| || ||||||
Sbjct: 38925660 agcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatc 38925601
Query: 220 cagcatacaagggaccttggaaacgcaag 248
|||||||||||||||| ||||| ||||||
Sbjct: 38925600 cagcatacaagggaccatggaagcgcaag 38925572
Score = 101 bits (51), Expect = 8e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||||
Sbjct: 38925307 cagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattg 38925248
Query: 364 aagtttggcaggtaa 378
| |||||||||||||
Sbjct: 38925247 aggtttggcaggtaa 38925233
Score = 89.7 bits (45), Expect = 3e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
||||||||| |||||||| ||||| |||||||| || |||||||| || || || |||||
Sbjct: 38925147 gcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgc 38925088
Query: 431 aagaaaggttgttgaggaaacttggggtgcaaatagggagg 471
|||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 38925087 aagaaaagctgctgaggaaacatggggtgcaaacagggagg 38925047
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 56 gcctaaggattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 38926117 gcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagagg 38926059
Score = 81.8 bits (41), Expect = 7e-013
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 38925477 aatcctaactacaagggtaaatggaagatcccatggattgataatccag 38925429
Score = 73.8 bits (37), Expect = 2e-010
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagggaggata 525
|||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 38924967 aggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggata 38924911
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||||||||| ||||| ||||||||||||| || |||||||||
Sbjct: 38925984 agggctatgattctattccaaaggagattcctgatccaaaagacaaaaag 38925935
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaa 54
||||||||||| || |||||||||||||| |||||||
Sbjct: 38926238 ctccctcctcgcaagattaaggatgttcatgccaaaa 38926202
>gb|CB663833.1|CB663833 OSJNEd09D13.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09D13 3', mRNA sequence
Length = 662
Score = 99.6 bits (50), Expect = 3e-018
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 454 ggggtgcaaatagggaggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaag 513
|||||||||| |||||||| ||||| || ||||||||||||||||| |||||||||||||
Sbjct: 662 ggggtgcaaacagggaggcggaaaaagaggcttttgaagaagctgagaaggagaggaaag 603
Query: 514 ctagggaggatagggaag 531
|||| ||||||| |||||
Sbjct: 602 ctagagaggataaggaag 585
>gb|AC108522.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A05,
*** SEQUENCING IN PROGRESS ***
Length = 87445
Score = 93.7 bits (47), Expect = 2e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
|||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 86381 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 86322
Query: 431 aagaaaggttgttga 445
||||| ||||||||
Sbjct: 86321 aagaagtgttgttga 86307
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 87414 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 87363
Score = 81.8 bits (41), Expect = 7e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
||||||| |||||||||| ||||| ||||| |||||||||| |||||| || | ||||
Sbjct: 86933 agcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatc 86874
Query: 220 cagcatacaagggaccttggaaacgcaag 248
||| ||||||||||| |||||||||||||
Sbjct: 86873 cagaatacaagggacgttggaaacgcaag 86845
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 251 aattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||| || |||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 86769 aattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 86714
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||||||
Sbjct: 86575 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 86516
Query: 364 aagtttggcaggta 377
| ||||||||||||
Sbjct: 86515 aggtttggcaggta 86502
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 87288 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 87239
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0013J02, complete sequence
Length = 118026
Score = 93.7 bits (47), Expect = 2e-016
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
|||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 44160 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 44219
Query: 431 aagaaaggttgttga 445
||||| ||||||||
Sbjct: 44220 aagaagtgttgttga 44234
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 43127 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 43178
Score = 81.8 bits (41), Expect = 7e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
||||||| |||||||||| ||||| ||||| |||||||||| |||||| || | ||||
Sbjct: 43608 agcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatc 43667
Query: 220 cagcatacaagggaccttggaaacgcaag 248
||| ||||||||||| |||||||||||||
Sbjct: 43668 cagaatacaagggacgttggaaacgcaag 43696
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 251 aattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||| || |||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 43772 aattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 43827
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||||||
Sbjct: 43966 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 44025
Query: 364 aagtttggcaggta 377
| ||||||||||||
Sbjct: 44026 aggtttggcaggta 44039
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 43253 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 43302
>gb|AACV01012526.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012526, whole
genome shotgun sequence
Length = 37647
Score = 93.7 bits (47), Expect = 2e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
|||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 31832 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 31773
Query: 431 aagaaaggttgttga 445
||||| ||||||||
Sbjct: 31772 aagaagtgttgttga 31758
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 32865 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 32814
Score = 81.8 bits (41), Expect = 7e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
||||||| |||||||||| ||||| ||||| |||||||||| |||||| || | ||||
Sbjct: 32384 agcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatc 32325
Query: 220 cagcatacaagggaccttggaaacgcaag 248
||| ||||||||||| |||||||||||||
Sbjct: 32324 cagaatacaagggacgttggaaacgcaag 32296
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 251 aattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||| || |||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 32220 aattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 32165
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||||||
Sbjct: 32026 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 31967
Query: 364 aagtttggcaggta 377
| ||||||||||||
Sbjct: 31966 aggtttggcaggta 31953
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 32739 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 32690
>ref|NT_107215.1| Oryza sativa (japonica cultivar-group)
Length = 213124
Score = 93.7 bits (47), Expect = 2e-016
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
|||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 139258 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 139317
Query: 431 aagaaaggttgttga 445
||||| ||||||||
Sbjct: 139318 aagaagtgttgttga 139332
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 138225 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 138276
Score = 81.8 bits (41), Expect = 7e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
||||||| |||||||||| ||||| ||||| |||||||||| |||||| || | ||||
Sbjct: 138706 agcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatc 138765
Query: 220 cagcatacaagggaccttggaaacgcaag 248
||| ||||||||||| |||||||||||||
Sbjct: 138766 cagaatacaagggacgttggaaacgcaag 138794
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 251 aattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||| || |||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 138870 aattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 138925
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||||||
Sbjct: 139064 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 139123
Query: 364 aagtttggcaggta 377
| ||||||||||||
Sbjct: 139124 aggtttggcaggta 139137
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 138351 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 138400
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 93.7 bits (47), Expect = 2e-016
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
|||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 7304942 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 7305001
Query: 431 aagaaaggttgttga 445
||||| ||||||||
Sbjct: 7305002 aagaagtgttgttga 7305016
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 7303909 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 7303960
Score = 81.8 bits (41), Expect = 7e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
||||||| |||||||||| ||||| ||||| |||||||||| |||||| || | ||||
Sbjct: 7304390 agcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatc 7304449
Query: 220 cagcatacaagggaccttggaaacgcaag 248
||| ||||||||||| |||||||||||||
Sbjct: 7304450 cagaatacaagggacgttggaaacgcaag 7304478
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 251 aattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||| || |||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 7304554 aattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 7304609
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||||||
Sbjct: 7304748 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 7304807
Query: 364 aagtttggcaggta 377
| ||||||||||||
Sbjct: 7304808 aggtttggcaggta 7304821
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 7304035 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 7304084
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 93.7 bits (47), Expect = 2e-016
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
|||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 24605255 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 24605314
Query: 431 aagaaaggttgttga 445
||||| ||||||||
Sbjct: 24605315 aagaagtgttgttga 24605329
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 24604222 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 24604273
Score = 81.8 bits (41), Expect = 7e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
||||||| |||||||||| ||||| ||||| |||||||||| |||||| || | ||||
Sbjct: 24604703 agcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatc 24604762
Query: 220 cagcatacaagggaccttggaaacgcaag 248
||| ||||||||||| |||||||||||||
Sbjct: 24604763 cagaatacaagggacgttggaaacgcaag 24604791
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 251 aattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||| || |||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 24604867 aattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 24604922
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||||||
Sbjct: 24605061 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 24605120
Query: 364 aagtttggcaggta 377
| ||||||||||||
Sbjct: 24605121 aggtttggcaggta 24605134
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 24604348 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 24604397
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 93.7 bits (47), Expect = 2e-016
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 371 gcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgc 430
|||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 24857275 gcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgc 24857334
Query: 431 aagaaaggttgttga 445
||||| ||||||||
Sbjct: 24857335 aagaagtgttgttga 24857349
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 24856242 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 24856293
Score = 81.8 bits (41), Expect = 7e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 160 agcctgacacatgggatgaagatgaggatggaatatggaagcccagaatggtatcaaatc 219
||||||| |||||||||| ||||| ||||| |||||||||| |||||| || | ||||
Sbjct: 24856723 agcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatc 24856782
Query: 220 cagcatacaagggaccttggaaacgcaag 248
||| ||||||||||| |||||||||||||
Sbjct: 24856783 cagaatacaagggacgttggaaacgcaag 24856811
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 251 aattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||| || |||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 24856887 aattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccag 24856942
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||| |||||||| || ||||| || ||||||||||| |||||| ||||| | |||||||
Sbjct: 24857081 cagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattg 24857140
Query: 364 aagtttggcaggta 377
| ||||||||||||
Sbjct: 24857141 aggtttggcaggta 24857154
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 24856368 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 24856417
>gb|AQ839863.1|AQ839863 nbxb0049B24r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0049B24r, DNA sequence
Length = 528
Score = 87.7 bits (44), Expect = 1e-014
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 63 gattgggatgacagagaatatattgaagatcctgatgaagttaagccagagg 114
|||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 368 gattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagg 317
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 agggctatgattctatcccaaaacagattcctgatccgaaggacaaaaag 161
|||||||||| ||||| || ||| ||||||||||||| ||||||||||||
Sbjct: 242 agggctatgactctattcctaaagagattcctgatccaaaggacaaaaag 193
>gb|CB660103.1|CB660103 OSJNEd01J08.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01J08 5', mRNA sequence
Length = 737
Score = 85.7 bits (43), Expect = 5e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 18 ctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattgggatgacaga 77
||||||||||| | ||||||||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 664 ctccctcctcgggagattaaggatgttcgtgccgaaaagcctaaggattgggatgacaga 723
Query: 78 gaatatattga 88
|||||||||||
Sbjct: 724 gaatatattga 734
>gb|CB681050.1|CB681050 OSJNEf06N02.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06N02 3', mRNA sequence
Length = 736
Score = 79.8 bits (40), Expect = 3e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 386 ttcagttttcgacaacattctgatttgtgatgaccctgagtatgcaagaaaggttgttga 445
||||||||| ||||||||| |||||||||| ||||| ||||||||||||| ||||||||
Sbjct: 736 ttcagtttttgacaacattttgatttgtgacgacccggagtatgcaagaagtgttgttga 677
Query: 446 ggaaacttggggtgcaaatagggaggctgaaaagga 481
||| | ||| |||||||| ||||| ||||||||
Sbjct: 676 tgaagttagggttgcaaataaagaggcggaaaagga 641
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,877,053
Number of Sequences: 438736
Number of extensions: 1877053
Number of successful extensions: 10349
Number of sequences better than 0.5: 59
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9930
Number of HSP's gapped (non-prelim): 415
length of query: 1094
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1073
effective length of database: 2,791,206,460
effective search space: 2994964531580
effective search space used: 2994964531580
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)