BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012915.2.2
(621 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (ja... 196 1e-047
gb|AU184077.1|AU184077 AU184077 Rice root Oryza sativa (jap... 196 1e-047
dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA... 196 1e-047
dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA... 196 1e-047
dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA... 196 1e-047
dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA... 196 1e-047
ref|NM_197701.1| Oryza sativa (japonica cultivar-group) bet... 196 1e-047
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 192 2e-046
dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA... 192 2e-046
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 192 2e-046
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 192 2e-046
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 192 2e-046
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 192 2e-046
gb|CD670606.1|CD670606 OsMR021 5MT resistant rice mutant cD... 188 2e-045
dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA... 188 2e-045
dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA... 157 9e-036
dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA... 157 9e-036
dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA... 157 9e-036
dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA... 157 9e-036
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 157 9e-036
gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) c... 157 9e-036
ref|NM_197698.1| Oryza sativa (japonica cultivar-group) bet... 157 9e-036
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 157 9e-036
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 157 9e-036
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 157 9e-036
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 157 9e-036
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 157 9e-036
gb|AU161321.1|AU161321 AU161321 Rice callus Oryza sativa (j... 139 2e-030
gb|AU077523.1|AU077523 AU077523 Rice callus Oryza sativa (j... 125 3e-026
gb|AU108787.1|AU108787 AU108787 Rice callus Oryza sativa (j... 125 3e-026
gb|C20417.1|C20417 C20417 Rice panicle at ripening stage Or... 123 1e-025
gb|C98131.1|C98131 C98131 Rice callus Oryza sativa (japonic... 123 1e-025
gb|AU094597.1|AU094597 AU094597 Rice panicle at ripening st... 123 1e-025
gb|AU225903.1|AU225903 AU225903 Oryza sativa Koshihikari pi... 123 1e-025
gb|CV722636.1|CV722636 root--01-B24.g1 Rice root lambda pha... 123 1e-025
dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA... 123 1e-025
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 123 1e-025
gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) c... 123 1e-025
gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) c... 121 5e-025
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 121 5e-025
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 121 5e-025
dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA... 117 7e-024
dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA... 117 7e-024
ref|NM_197700.1| Oryza sativa (japonica cultivar-group) bet... 117 7e-024
gb|C96991.1|C96991 C96991 Rice callus Oryza sativa (japonic... 115 3e-023
gb|AU093543.1|AU093543 AU093543 Rice callus Oryza sativa (j... 111 5e-022
gb|AU173230.1|AU173230 AU173230 Rice root Oryza sativa (jap... 103 1e-019
gb|AU184180.1|AU184180 AU184180 Rice root Oryza sativa (jap... 103 1e-019
gb|AU184078.1|AU184078 AU184078 Rice root Oryza sativa (jap... 98 7e-018
gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature lea... 96 3e-017
gb|AU108370.1|AU108370 AU108370 Rice shoot Oryza sativa (ja... 94 1e-016
gb|AU070620.1|AU070620 AU070620 Rice shoot Oryza sativa (ja... 90 2e-015
gb|AU165472.1|AU165472 AU165472 Rice panicle at flowering s... 88 7e-015
dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA... 88 7e-015
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 88 7e-015
gb|C96739.1|C96739 C96739 Rice callus Oryza sativa (japonic... 86 3e-014
gb|AU174239.1|AU174239 AU174239 Rice shoot Oryza sativa (ja... 86 3e-014
dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA... 86 3e-014
dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA... 86 3e-014
dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA... 86 3e-014
ref|NM_197699.1| Oryza sativa (japonica cultivar-group) bet... 86 3e-014
dbj|AP003875.3| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AACV01017536.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 84 1e-013
gb|CH401229.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|C27500.1|C27500 C27500 Rice callus cDNA Oryza sativa (ja... 82 4e-013
gb|AU198282.1|AU198282 AU198282 Rice green shoot Oryza sati... 80 2e-012
gb|AU163761.1|AU163761 AU163761 Rice panicle at ripening st... 76 3e-011
gb|AU164552.1|AU164552 AU164552 Rice root Oryza sativa (jap... 74 1e-010
gb|CF276870.1|CF276870 14ETL--02-D03.b1 Rice etiolated leaf... 72 4e-010
gb|CF293831.1|CF293831 30DGS--03-C11.b1 Rice leaf plasmid c... 72 4e-010
gb|CF311056.1|CF311056 ABF--06-C03.b1 ABF3-overexpressing t... 72 4e-010
gb|CF311548.1|CF311548 ABF--06-M21.g1 ABF3-overexpressing t... 72 4e-010
gb|CF328550.1|CF328550 NACL--03-I06.b1 Rice callus plasmid ... 72 4e-010
gb|CF333825.1|CF333825 JMT--02-N24.b1 AtJMT-overexpressing ... 72 4e-010
gb|CV720797.1|CV720797 YBH--01-O04.b1 Rice before heading y... 72 4e-010
gb|CF277133.1|CF277133 14ETL--02-I21.b1 Rice etiolated leaf... 68 6e-009
gb|CD670632.1|CD670632 OsMR047 5MT resistant rice mutant cD... 66 2e-008
dbj|AP005289.2| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-008
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 66 2e-008
dbj|AP005072.3| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|CD670675.1|CD670675 OsMR090 5MT resistant rice mutant cD... 64 1e-007
gb|CF333826.1|CF333826 JMT--02-N24.g1 AtJMT-overexpressing ... 62 4e-007
gb|CF332237.1|CF332237 NACL--08-K17.g1 Rice callus plasmid ... 60 1e-006
gb|C24955.1|C24955 C24955 Rice green shoot Oryza sativa (ja... 58 6e-006
gb|C98824.1|C98824 C98824 Rice panicle at flowering stage O... 54 9e-005
gb|CD670812.1|CD670812 OsMR231 5MT resistant rice mutant cD... 54 9e-005
dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AP004768.3| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
dbj|AP005513.3| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|AACV01005005.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01010248.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01011389.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AC119290.2| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
ref|XM_466967.1| Oryza sativa (japonica cultivar-group), mRNA 54 9e-005
ref|XM_473433.1| Oryza sativa (japonica cultivar-group), p... 54 9e-005
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 54 9e-005
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromoso... 54 9e-005
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|AU094457.1|AU094457 AU094457 Rice panicle at ripening st... 50 0.001
gb|AU166877.1|AU166877 AU166877 Rice callus (2001) Oryza sa... 50 0.001
gb|D41180.1|D41180 RICS3505A Rice shoot Oryza sativa (japon... 48 0.006
gb|AACV01010249.1| Oryza sativa (japonica cultivar-group) c... 46 0.022
ref|XM_473434.1| Oryza sativa (japonica cultivar-group), p... 46 0.022
gb|CB684864.1|CB684864 OSJNEf14M19.r OSJNEf Oryza sativa (j... 44 0.089
gb|CO435701.1|CO435701 OsMR767 5MT resistant rice mutant cD... 44 0.089
gb|AACV01010167.1| Oryza sativa (japonica cultivar-group) c... 44 0.089
ref|XM_473269.1| Oryza sativa (japonica cultivar-group), p... 44 0.089
emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromoso... 44 0.089
emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromoso... 44 0.089
gb|AU029750.1|AU029750 AU029750 Rice panicle shorter than 3... 42 0.35
gb|AU165517.1|AU165517 AU165517 Rice panicle at flowering s... 42 0.35
gb|AU184759.1|AU184759 AU184759 Rice root Oryza sativa (jap... 42 0.35
gb|CB660056.1|CB660056 OSJNEd01H24.r OSJNEd Oryza sativa (j... 42 0.35
gb|CB660094.1|CB660094 OSJNEd01I24.r OSJNEd Oryza sativa (j... 42 0.35
gb|CB680989.1|CB680989 OSJNEf06K21.r OSJNEf Oryza sativa (j... 42 0.35
gb|CB685606.1|CB685606 OSJNEf16C16.r OSJNEf Oryza sativa (j... 42 0.35
gb|CF326079.1|CF326079 JMT1--05-A19.g1 AtJMT-overexpressing... 42 0.35
gb|CD670702.1|CD670702 OsMR117 5MT resistant rice mutant cD... 42 0.35
gb|CD670899.1|CD670899 OsMR320 5MT resistant rice mutant cD... 42 0.35
gb|CD671026.1|CD671026 OsMR447 5MT resistant rice mutant cD... 42 0.35
gb|CO436027.1|CO436027 OsMR949 5MT resistant rice mutant cD... 42 0.35
gb|CO436311.1|CO436311 RK05 5MT resistant rice mutant cDNA ... 42 0.35
>gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51142_1A, mRNA sequence
Length = 462
Score = 196 bits (99), Expect = 1e-047
Identities = 227/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 44 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 100
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 101 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 160
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 161 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 220
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 221 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 280
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||||| ||||| ||||||
Sbjct: 281 gcgacgtggtgcaggtggacctgatggag 309
>gb|AU184077.1|AU184077 AU184077 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0912, mRNA sequence
Length = 450
Score = 196 bits (99), Expect = 1e-047
Identities = 227/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 124 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 180
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 181 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 240
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 241 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 300
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 301 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 360
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||||| ||||| ||||||
Sbjct: 361 gcgacgtggtgcaggtggacctgatggag 389
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
insert sequence
Length = 1794
Score = 196 bits (99), Expect = 1e-047
Identities = 227/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 502 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 558
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 559 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 618
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 619 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 678
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 679 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 738
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||||| ||||| ||||||
Sbjct: 739 gcgacgtggtgcaggtggacctgatggag 767
Score = 89.7 bits (45), Expect = 2e-015
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 801 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 860
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | |||||||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 861 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgc 913
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
insert sequence
Length = 1475
Score = 196 bits (99), Expect = 1e-047
Identities = 227/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 684 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 740
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 741 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 800
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 801 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 860
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 861 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 920
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||||| ||||| ||||||
Sbjct: 921 gcgacgtggtgcaggtggacctgatggag 949
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 983 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 1042
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 1043 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 1102
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 1103 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 1156
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
insert sequence
Length = 1266
Score = 196 bits (99), Expect = 1e-047
Identities = 227/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 496 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 552
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 553 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 612
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 613 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 672
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 673 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 732
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||||| ||||| ||||||
Sbjct: 733 gcgacgtggtgcaggtggacctgatggag 761
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 795 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 854
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 855 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 914
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 915 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 968
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full
insert sequence
Length = 1290
Score = 196 bits (99), Expect = 1e-047
Identities = 227/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 503 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 559
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 560 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 619
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 620 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 679
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 680 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 739
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||||| ||||| ||||||
Sbjct: 740 gcgacgtggtgcaggtggacctgatggag 768
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 802 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 861
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 862 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 921
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 922 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 975
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4
(OSJNBa0010C11.2), mRNA
Length = 1340
Score = 196 bits (99), Expect = 1e-047
Identities = 227/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 490 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 546
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 547 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 606
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 607 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 666
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 667 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 726
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||||| ||||| ||||||
Sbjct: 727 gcgacgtggtgcaggtggacctgatggag 755
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 789 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 848
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 849 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 908
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 909 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 962
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
Length = 162241
Score = 192 bits (97), Expect = 2e-046
Identities = 249/299 (83%), Gaps = 3/299 (1%)
Strand = Plus / Plus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 104510 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 104566
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 104567 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 104626
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 104627 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 104686
Query: 213 agttcccaggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcg 272
||||||| ||||||||||| || |||||||| |||||||| |||| || || ||| | |
Sbjct: 104687 agttcccgggcctcaaggtgggattccacgtggaggaagggtccagccccgtgtacctgg 104746
Query: 273 ccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
| |||||||| |||||||||||||||||||| ||||| | ||||| ||||||| ||||
Sbjct: 104747 cggtgctggtggagtacgagaacggcgacggagacgtggcgcaggtggacctcaaggag 104805
Score = 129 bits (65), Expect = 2e-027
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 389 gactccaaccaccgcctgcagccacccttctccatccgcacccgcaccgactccggcaag 448
||||||||||||||||||| | | || ||||||||||||| ||| | |||||||||||||
Sbjct: 104869 gactccaaccaccgcctgcgggcgccattctccatccgcatccggagcgactccggcaag 104928
Query: 449 acgctcgtcgcacgcgacgtcatcccactcaactggaggccaaacacattctacagatcc 508
||| | || |||| |||||||||||| |||||||||| ||| ||||| |||||| | |||
Sbjct: 104929 acgttggtggcacccgacgtcatccccctcaactggacgcccaacaccttctaccgttcc 104988
Query: 509 atcgtccagtactcctc 525
||||||||||||||||
Sbjct: 104989 ttcgtccagtactcctc 105005
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 94015 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 93956
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 93955 gagctccgccacgccggcatcatcgacatccagttc 93920
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 93514 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 93461
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 93415 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 93356
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 93355 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 93303
>dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069H18, full
insert sequence
Length = 1019
Score = 192 bits (97), Expect = 2e-046
Identities = 249/299 (83%), Gaps = 3/299 (1%)
Strand = Plus / Plus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 399 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 455
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 456 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 515
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 516 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 575
Query: 213 agttcccaggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcg 272
||||||| ||||||||||| || |||||||| |||||||| |||| || || ||| | |
Sbjct: 576 agttcccgggcctcaaggtgggattccacgtggaggaagggtccagccccgtgtacctgg 635
Query: 273 ccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
| |||||||| |||||||||||||||||||| ||||| | ||||| ||||||| ||||
Sbjct: 636 cggtgctggtggagtacgagaacggcgacggagacgtggcgcaggtggacctcaaggag 694
Score = 129 bits (65), Expect = 2e-027
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 389 gactccaaccaccgcctgcagccacccttctccatccgcacccgcaccgactccggcaag 448
||||||||||||||||||| | | || ||||||||||||| ||| | |||||||||||||
Sbjct: 758 gactccaaccaccgcctgcgggcgccattctccatccgcatccggagcgactccggcaag 817
Query: 449 acgctcgtcgcacgcgacgtcatcccactcaactggaggccaaacacattctacagatcc 508
||| | || |||| |||||||||||| |||||||||| ||| ||||| |||||| | |||
Sbjct: 818 acgttggtggcacccgacgtcatccccctcaactggacgcccaacaccttctaccgttcc 877
Query: 509 atcgtccagtactcctc 525
||||||||||||||||
Sbjct: 878 ttcgtccagtactcctc 894
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAb0079B22, from chromosome 3, complete sequence
Length = 156933
Score = 192 bits (97), Expect = 2e-046
Identities = 249/299 (83%), Gaps = 3/299 (1%)
Strand = Plus / Minus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 92156 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 92100
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 92099 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 92040
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 92039 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 91980
Query: 213 agttcccaggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcg 272
||||||| ||||||||||| || |||||||| |||||||| |||| || || ||| | |
Sbjct: 91979 agttcccgggcctcaaggtgggattccacgtggaggaagggtccagccccgtgtacctgg 91920
Query: 273 ccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
| |||||||| |||||||||||||||||||| ||||| | ||||| ||||||| ||||
Sbjct: 91919 cggtgctggtggagtacgagaacggcgacggagacgtggcgcaggtggacctcaaggag 91861
Score = 129 bits (65), Expect = 2e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 389 gactccaaccaccgcctgcagccacccttctccatccgcacccgcaccgactccggcaag 448
||||||||||||||||||| | | || ||||||||||||| ||| | |||||||||||||
Sbjct: 91797 gactccaaccaccgcctgcgggcgccattctccatccgcatccggagcgactccggcaag 91738
Query: 449 acgctcgtcgcacgcgacgtcatcccactcaactggaggccaaacacattctacagatcc 508
||| | || |||| |||||||||||| |||||||||| ||| ||||| |||||| | |||
Sbjct: 91737 acgttggtggcacccgacgtcatccccctcaactggacgcccaacaccttctaccgttcc 91678
Query: 509 atcgtccagtactcctc 525
||||||||||||||||
Sbjct: 91677 ttcgtccagtactcctc 91661
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 102651 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 102710
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 102711 gagctccgccacgccggcatcatcgacatccagttc 102746
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 103152 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 103205
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 103251 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 103310
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 103311 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 103363
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 192 bits (97), Expect = 2e-046
Identities = 249/299 (83%), Gaps = 3/299 (1%)
Strand = Plus / Minus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 158156 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 158100
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 158099 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 158040
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 158039 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 157980
Query: 213 agttcccaggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcg 272
||||||| ||||||||||| || |||||||| |||||||| |||| || || ||| | |
Sbjct: 157979 agttcccgggcctcaaggtgggattccacgtggaggaagggtccagccccgtgtacctgg 157920
Query: 273 ccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
| |||||||| |||||||||||||||||||| ||||| | ||||| ||||||| ||||
Sbjct: 157919 cggtgctggtggagtacgagaacggcgacggagacgtggcgcaggtggacctcaaggag 157861
Score = 129 bits (65), Expect = 2e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 389 gactccaaccaccgcctgcagccacccttctccatccgcacccgcaccgactccggcaag 448
||||||||||||||||||| | | || ||||||||||||| ||| | |||||||||||||
Sbjct: 157797 gactccaaccaccgcctgcgggcgccattctccatccgcatccggagcgactccggcaag 157738
Query: 449 acgctcgtcgcacgcgacgtcatcccactcaactggaggccaaacacattctacagatcc 508
||| | || |||| |||||||||||| |||||||||| ||| ||||| |||||| | |||
Sbjct: 157737 acgttggtggcacccgacgtcatccccctcaactggacgcccaacaccttctaccgttcc 157678
Query: 509 atcgtccagtactcctc 525
||||||||||||||||
Sbjct: 157677 ttcgtccagtactcctc 157661
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 168651 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 168710
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 168711 gagctccgccacgccggcatcatcgacatccagttc 168746
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 169152 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 169205
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 169251 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 169310
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 169311 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 169363
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
complete sequence
Length = 36192742
Score = 192 bits (97), Expect = 2e-046
Identities = 249/299 (83%), Gaps = 3/299 (1%)
Strand = Plus / Minus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 158156 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 158100
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 158099 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 158040
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 158039 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 157980
Query: 213 agttcccaggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcg 272
||||||| ||||||||||| || |||||||| |||||||| |||| || || ||| | |
Sbjct: 157979 agttcccgggcctcaaggtgggattccacgtggaggaagggtccagccccgtgtacctgg 157920
Query: 273 ccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
| |||||||| |||||||||||||||||||| ||||| | ||||| ||||||| ||||
Sbjct: 157919 cggtgctggtggagtacgagaacggcgacggagacgtggcgcaggtggacctcaaggag 157861
Score = 129 bits (65), Expect = 2e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 389 gactccaaccaccgcctgcagccacccttctccatccgcacccgcaccgactccggcaag 448
||||||||||||||||||| | | || ||||||||||||| ||| | |||||||||||||
Sbjct: 157797 gactccaaccaccgcctgcgggcgccattctccatccgcatccggagcgactccggcaag 157738
Query: 449 acgctcgtcgcacgcgacgtcatcccactcaactggaggccaaacacattctacagatcc 508
||| | || |||| |||||||||||| |||||||||| ||| ||||| |||||| | |||
Sbjct: 157737 acgttggtggcacccgacgtcatccccctcaactggacgcccaacaccttctaccgttcc 157678
Query: 509 atcgtccagtactcctc 525
||||||||||||||||
Sbjct: 157677 ttcgtccagtactcctc 157661
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 168651 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 168710
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 168711 gagctccgccacgccggcatcatcgacatccagttc 168746
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 169152 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 169205
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 169251 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 169310
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 169311 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 169363
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 192 bits (97), Expect = 2e-046
Identities = 249/299 (83%), Gaps = 3/299 (1%)
Strand = Plus / Minus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 158156 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 158100
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 158099 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 158040
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 158039 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 157980
Query: 213 agttcccaggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcg 272
||||||| ||||||||||| || |||||||| |||||||| |||| || || ||| | |
Sbjct: 157979 agttcccgggcctcaaggtgggattccacgtggaggaagggtccagccccgtgtacctgg 157920
Query: 273 ccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
| |||||||| |||||||||||||||||||| ||||| | ||||| ||||||| ||||
Sbjct: 157919 cggtgctggtggagtacgagaacggcgacggagacgtggcgcaggtggacctcaaggag 157861
Score = 129 bits (65), Expect = 2e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 389 gactccaaccaccgcctgcagccacccttctccatccgcacccgcaccgactccggcaag 448
||||||||||||||||||| | | || ||||||||||||| ||| | |||||||||||||
Sbjct: 157797 gactccaaccaccgcctgcgggcgccattctccatccgcatccggagcgactccggcaag 157738
Query: 449 acgctcgtcgcacgcgacgtcatcccactcaactggaggccaaacacattctacagatcc 508
||| | || |||| |||||||||||| |||||||||| ||| ||||| |||||| | |||
Sbjct: 157737 acgttggtggcacccgacgtcatccccctcaactggacgcccaacaccttctaccgttcc 157678
Query: 509 atcgtccagtactcctc 525
||||||||||||||||
Sbjct: 157677 ttcgtccagtactcctc 157661
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 168651 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 168710
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 168711 gagctccgccacgccggcatcatcgacatccagttc 168746
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 169152 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 169205
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 169251 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 169310
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 169311 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 169363
>gb|CD670606.1|CD670606 OsMR021 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 681
Score = 188 bits (95), Expect = 2e-045
Identities = 232/277 (83%), Gaps = 3/277 (1%)
Strand = Plus / Plus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 296 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 352
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 353 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 412
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 413 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 472
Query: 213 agttcccaggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcg 272
||||||| ||||||||||| || |||||||| |||||||| |||| || || ||| | |
Sbjct: 473 agttcccgggcctcaaggtgggattccacgtggaggaagggtccagccccgtgtacctgg 532
Query: 273 ccgtgctggtcgagtacgagaacggcgacggcgacgt 309
| |||||||| |||||||||||||||||||| |||||
Sbjct: 533 cggtgctggtggagtacgagaacggcgacggagacgt 569
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
insert sequence
Length = 1293
Score = 188 bits (95), Expect = 2e-045
Identities = 226/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 502 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 558
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 559 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 618
Query: 183 tcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacg 242
|||||||| ||||| ||||||| || ||||||||||| || |||||| |||| |||||||
Sbjct: 619 tcgacatcgagttcaccagggtgccatgcgagttcccggggctcaagatcgggttccacg 678
Query: 243 tcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacg 302
| ||||| ||| | || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 679 tggaggagtactcgaaccctgtgtacttcgcggtgctggtggagtacgaggacggcgacg 738
Query: 303 gcgacgtcgtccaggtcgacctcatggag 331
||||||| || ||| | ||||| ||||||
Sbjct: 739 gcgacgtggtgcagatggacctgatggag 767
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 801 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 860
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 861 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 920
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 921 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 974
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full
insert sequence
Length = 1259
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 494 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 553
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 554 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 613
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 614 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 673
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 674 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 724
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 757 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 816
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 817 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 870
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full
insert sequence
Length = 1263
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 500 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 559
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 560 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 619
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 620 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 679
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 680 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 730
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 763 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 822
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 823 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 876
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full
insert sequence
Length = 1257
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 494 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 553
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 554 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 613
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 614 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 673
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 674 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 724
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 757 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 816
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 817 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 870
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full
insert sequence
Length = 1257
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 494 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 553
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 554 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 613
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 614 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 673
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 674 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 724
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 757 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 816
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 817 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 870
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
sequence
Length = 135510
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 22615 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 22674
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 22675 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 22734
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 22735 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 22794
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 22795 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 22845
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 22878 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 22937
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 22938 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 22991
Score = 85.7 bits (43), Expect = 3e-014
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 17016 ctggacgcccatgcgccgctcctggggatccatctggcgcctcgacgccaaccaccgcct 17075
Query: 406 gcagccacccttctccatccgca 428
||| ||||||||| ||||||
Sbjct: 17076 ccagggccccttctccctccgca 17098
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 5018 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 5077
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 5078 ggcgacggcgacgtggtgcaggtggatctcatggag 5113
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 4538 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 4597
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 4598 cagctccgccacgccggcatcatcgacatccagttc 4633
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 5129 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 5187
Score = 56.0 bits (28), Expect = 2e-005
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||| | ||| || | ||||||
Sbjct: 16756 taccacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgac 16815
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 16816 cagctccgccacgccggcatcatcgacatccagttc 16851
Score = 42.1 bits (21), Expect = 0.35
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 235 cttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagt 287
|||||||||||||| || |||| || ||| ||| ||||||||||||| ||||
Sbjct: 16890 cttccacgtcgaggccgggtccaacccggtgtacctcgccgtgctggtggagt 16942
>gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022091, whole
genome shotgun sequence
Length = 36005
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 21909 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 21968
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 21969 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 22028
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 22029 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 22088
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 22089 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 22139
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 22172 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 22231
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 22232 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 22285
Score = 85.7 bits (43), Expect = 3e-014
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 16310 ctggacgcccatgcgccgctcctggggatccatctggcgcctcgacgccaaccaccgcct 16369
Query: 406 gcagccacccttctccatccgca 428
||| ||||||||| ||||||
Sbjct: 16370 ccagggccccttctccctccgca 16392
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 4312 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 4371
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 4372 ggcgacggcgacgtggtgcaggtggatctcatggag 4407
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 3832 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 3891
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 3892 cagctccgccacgccggcatcatcgacatccagttc 3927
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 4423 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 4481
Score = 56.0 bits (28), Expect = 2e-005
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||| | ||| || | ||||||
Sbjct: 16050 taccacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgac 16109
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 16110 cagctccgccacgccggcatcatcgacatccagttc 16145
Score = 42.1 bits (21), Expect = 0.35
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 235 cttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagt 287
|||||||||||||| || |||| || ||| ||| ||||||||||||| ||||
Sbjct: 16184 cttccacgtcgaggccgggtccaacccggtgtacctcgccgtgctggtggagt 16236
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6
(OSJNBb0014I11.3), mRNA
Length = 1240
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 481 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 540
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 541 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 600
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 601 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 660
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 661 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 711
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 744 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 803
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 804 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 857
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 3233938 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 3233879
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 3233878 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 3233819
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 3233818 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 3233759
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 3233758 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 3233708
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3233675 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 3233616
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 3233615 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 3233562
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 3263772 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 3263831
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 3263832 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 3263891
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 3263892 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 3263945
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 3262895 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 3262951
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 3262952 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 3263011
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 3263012 tcgacatcgagttcaccagg 3263031
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 3263606 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 3263665
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 3263666 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 3263725
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 3263726 ggacctgatggag 3263738
Score = 85.7 bits (43), Expect = 3e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 3239537 ctggacgcccatgcgccgctcctggggatccatctggcgcctcgacgccaaccaccgcct 3239478
Query: 406 gcagccacccttctccatccgca 428
||| ||||||||| ||||||
Sbjct: 3239477 ccagggccccttctccctccgca 3239455
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 3251535 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 3251476
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 3251475 ggcgacggcgacgtggtgcaggtggatctcatggag 3251440
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 3252015 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 3251956
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 3251955 cagctccgccacgccggcatcatcgacatccagttc 3251920
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 3251424 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 3251366
Score = 56.0 bits (28), Expect = 2e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||| | ||| || | ||||||
Sbjct: 3239797 taccacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgac 3239738
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 3239737 cagctccgccacgccggcatcatcgacatccagttc 3239702
Score = 42.1 bits (21), Expect = 0.35
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 235 cttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagt 287
|||||||||||||| || |||| || ||| ||| ||||||||||||| ||||
Sbjct: 3239663 cttccacgtcgaggccgggtccaacccggtgtacctcgccgtgctggtggagt 3239611
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 9287097 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 9287038
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 9287037 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 9286978
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 9286977 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 9286918
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 9286917 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 9286867
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 9286834 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 9286775
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 9286774 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 9286721
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 9316647 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 9316706
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 9316707 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 9316766
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 9316767 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 9316820
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 9315770 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 9315826
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 9315827 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 9315886
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 9315887 tcgacatcgagttcaccagg 9315906
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 9316481 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 9316540
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 9316541 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 9316600
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 9316601 ggacctgatggag 9316613
Score = 85.7 bits (43), Expect = 3e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 9292696 ctggacgcccatgcgccgctcctggggatccatctggcgcctcgacgccaaccaccgcct 9292637
Query: 406 gcagccacccttctccatccgca 428
||| ||||||||| ||||||
Sbjct: 9292636 ccagggccccttctccctccgca 9292614
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 9304694 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 9304635
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 9304634 ggcgacggcgacgtggtgcaggtggatctcatggag 9304599
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 9305174 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 9305115
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 9305114 cagctccgccacgccggcatcatcgacatccagttc 9305079
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 9304583 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 9304525
Score = 56.0 bits (28), Expect = 2e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||| | ||| || | ||||||
Sbjct: 9292956 taccacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgac 9292897
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 9292896 cagctccgccacgccggcatcatcgacatccagttc 9292861
Score = 42.1 bits (21), Expect = 0.35
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 235 cttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagt 287
|||||||||||||| || |||| || ||| ||| ||||||||||||| ||||
Sbjct: 9292822 cttccacgtcgaggccgggtccaacccggtgtacctcgccgtgctggtggagt 9292770
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 20152891 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 20152832
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 20152831 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 20152772
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 20152771 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 20152712
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 20152711 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 20152661
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 20152628 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 20152569
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 20152568 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 20152515
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 20182441 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 20182500
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 20182501 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 20182560
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 20182561 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 20182614
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 20181564 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 20181620
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 20181621 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 20181680
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 20181681 tcgacatcgagttcaccagg 20181700
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 20182275 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 20182334
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 20182335 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 20182394
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 20182395 ggacctgatggag 20182407
Score = 85.7 bits (43), Expect = 3e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 20158490 ctggacgcccatgcgccgctcctggggatccatctggcgcctcgacgccaaccaccgcct 20158431
Query: 406 gcagccacccttctccatccgca 428
||| ||||||||| ||||||
Sbjct: 20158430 ccagggccccttctccctccgca 20158408
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 20170488 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 20170429
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 20170428 ggcgacggcgacgtggtgcaggtggatctcatggag 20170393
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 20170968 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 20170909
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 20170908 cagctccgccacgccggcatcatcgacatccagttc 20170873
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 20170377 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 20170319
Score = 56.0 bits (28), Expect = 2e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||| | ||| || | ||||||
Sbjct: 20158750 taccacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgac 20158691
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 20158690 cagctccgccacgccggcatcatcgacatccagttc 20158655
Score = 42.1 bits (21), Expect = 0.35
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 235 cttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagt 287
|||||||||||||| || |||| || ||| ||| ||||||||||||| ||||
Sbjct: 20158616 cttccacgtcgaggccgggtccaacccggtgtacctcgccgtgctggtggagt 20158564
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 21311744 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 21311685
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 21311684 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 21311625
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 21311624 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 21311565
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 21311564 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 21311514
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 21311481 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 21311422
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 21311421 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 21311368
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 21341578 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 21341637
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 21341638 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 21341697
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 21341698 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 21341751
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 21340701 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 21340757
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 21340758 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 21340817
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 21340818 tcgacatcgagttcaccagg 21340837
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 21341412 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 21341471
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 21341472 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 21341531
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 21341532 ggacctgatggag 21341544
Score = 85.7 bits (43), Expect = 3e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 21317343 ctggacgcccatgcgccgctcctggggatccatctggcgcctcgacgccaaccaccgcct 21317284
Query: 406 gcagccacccttctccatccgca 428
||| ||||||||| ||||||
Sbjct: 21317283 ccagggccccttctccctccgca 21317261
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 21329341 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 21329282
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 21329281 ggcgacggcgacgtggtgcaggtggatctcatggag 21329246
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 21329821 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 21329762
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 21329761 cagctccgccacgccggcatcatcgacatccagttc 21329726
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 21329230 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 21329172
Score = 56.0 bits (28), Expect = 2e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||| | ||| || | ||||||
Sbjct: 21317603 taccacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgac 21317544
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 21317543 cagctccgccacgccggcatcatcgacatccagttc 21317508
Score = 42.1 bits (21), Expect = 0.35
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 235 cttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagt 287
|||||||||||||| || |||| || ||| ||| ||||||||||||| ||||
Sbjct: 21317469 cttccacgtcgaggccgggtccaacccggtgtacctcgccgtgctggtggagt 21317417
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 157 bits (79), Expect = 9e-036
Identities = 193/231 (83%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | |||||||
Sbjct: 21323008 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgac 21322949
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | | ||||||||||||||||||||| | || |||||| | | |||
Sbjct: 21322948 aagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccg 21322889
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||||||
Sbjct: 21322888 ggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctc 21322829
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 21322828 gtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggag 21322778
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 21322745 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 21322686
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 21322685 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 21322632
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 21352841 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 21352900
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 21352901 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 21352960
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 21352961 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 21353014
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 21351964 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 21352020
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 21352021 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 21352080
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 21352081 tcgacatcgagttcaccagg 21352100
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 21352675 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 21352734
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 21352735 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 21352794
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 21352795 ggacctgatggag 21352807
Score = 85.7 bits (43), Expect = 3e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 21328607 ctggacgcccatgcgccgctcctggggatccatctggcgcctcgacgccaaccaccgcct 21328548
Query: 406 gcagccacccttctccatccgca 428
||| ||||||||| ||||||
Sbjct: 21328547 ccagggccccttctccctccgca 21328525
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 21340605 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 21340546
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 21340545 ggcgacggcgacgtggtgcaggtggatctcatggag 21340510
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 21341085 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 21341026
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 21341025 cagctccgccacgccggcatcatcgacatccagttc 21340990
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 21340494 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 21340436
Score = 56.0 bits (28), Expect = 2e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||| | ||| || | ||||||
Sbjct: 21328867 taccacttcgacctgagcggcacggcgttcggcgccatggcgaggccggggctgaacgac 21328808
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 21328807 cagctccgccacgccggcatcatcgacatccagttc 21328772
Score = 42.1 bits (21), Expect = 0.35
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 235 cttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagt 287
|||||||||||||| || |||| || ||| ||| ||||||||||||| ||||
Sbjct: 21328733 cttccacgtcgaggccgggtccaacccggtgtacctcgccgtgctggtggagt 21328681
>gb|AU161321.1|AU161321 AU161321 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61589, mRNA sequence
Length = 710
Score = 139 bits (70), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 346 ctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 197 ctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcct 256
Query: 406 gcagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 257 ccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgc 310
Score = 129 bits (65), Expect = 2e-027
Identities = 133/156 (85%)
Strand = Plus / Plus
Query: 176 ggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggc 235
||||||||||||||||||||| | || |||||| | | ||| ||||||||| || |
Sbjct: 9 ggcatcatcgacatccagttcaggcgcgtcccctgcaactacccgggcctcaagatcaac 68
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||||||||| ||||||| || ||| |||||||||||||| |||||||||||| ||
Sbjct: 69 ttccacgtcgaggagggctccaacccggtgtacttcgccgtgctcgtcgagtacgaggac 128
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||| |||| ||||||||||||||||||
Sbjct: 129 ctcgacggcgacntcgtgcaggtcgacctcatggag 164
>gb|AU077523.1|AU077523 AU077523 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52443_12Z, mRNA sequence
Length = 413
Score = 125 bits (63), Expect = 3e-026
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 48 tggacgccgatgagggagtcgtggggctccatctggaggctggacnccaaccacaggctc 107
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 108 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 167
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 168 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 221
>gb|AU108787.1|AU108787 AU108787 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51142, mRNA sequence
Length = 579
Score = 125 bits (63), Expect = 3e-026
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 93 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 152
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 153 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccnacaac 212
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 213 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 266
>gb|C20417.1|C20417 C20417 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11993_1A, mRNA sequence
Length = 449
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 56 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 115
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 116 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 175
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 176 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 229
>gb|C98131.1|C98131 C98131 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0755_10Z, mRNA sequence
Length = 748
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 240 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 299
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 300 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 359
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 360 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 413
Score = 101 bits (51), Expect = 4e-019
Identities = 133/159 (83%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 174 ccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcg 233
||||||||||||||||| ||||| ||||| | || ||||||||||| || |||||| |||
Sbjct: 48 ccggcatcatcgacatcgagttcaccaggttgccatgcgagttcccggggctcaagatcg 107
Query: 234 gcttccacgtcgaggaaggctccacccaggtctac-ttcgccgtgctggtcgagtacgag 292
| |||||||| ||||| ||| | || || ||| ||||| |||||||| |||||||||
Sbjct: 108 ggttccacgtggaggagtactcgaaccctgtgtactttcgcggtgctggtggagtacgag 167
Query: 293 aacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||||| || ||||| ||||| ||||||
Sbjct: 168 gacggcgacggcgacgtggtgcaggtggacctgatggag 206
>gb|AU094597.1|AU094597 AU094597 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11993, mRNA sequence
Length = 562
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 55 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 114
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 115 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 174
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 175 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 228
>gb|AU225903.1|AU225903 AU225903 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0953, mRNA sequence
Length = 572
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 113 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 172
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 173 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 232
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 233 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 286
Score = 71.9 bits (36), Expect = 4e-010
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 268 cttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcat 327
|||||| |||||||| ||||||||| |||||||||||||||| || ||||| ||||| ||
Sbjct: 16 cttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggacctgat 75
Query: 328 ggag 331
||||
Sbjct: 76 ggag 79
>gb|CV722636.1|CV722636 root--01-B24.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--01-B24, mRNA sequence
Length = 398
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 93 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 152
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 153 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 212
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 213 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 266
Score = 56.0 bits (28), Expect = 2e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||||||| |||||||||||||||| || ||||| ||||| ||||||
Sbjct: 12 gagtacgaggacggcgacggcgacgtggtgcaggtggacctgatggag 59
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full
insert sequence
Length = 1883
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 1379 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 1438
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 1439 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 1498
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 1499 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 1552
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 502 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 558
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 559 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 618
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 619 tcgacatcgagttcaccagg 638
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 1213 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 1272
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 1273 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 1332
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 1333 ggacctgatggag 1345
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
sequence
Length = 147117
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 16591 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 16650
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 16651 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 16710
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 16711 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 16764
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 15714 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 15770
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 15771 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 15830
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 15831 tcgacatcgagttcaccagg 15850
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 16425 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 16484
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 16485 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 16544
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 16545 ggacctgatggag 16557
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 236 ttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaac 295
|||||||| ||||| || || | || ||| |||||||| |||||||| ||||||||| ||
Sbjct: 4355 ttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggac 4296
Query: 296 ggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||||||||| || ||||| || |||||||||
Sbjct: 4295 ggcgacggcgacgtggtgcaggtggatctcatggag 4260
Score = 71.9 bits (36), Expect = 4e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 4835 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 4776
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
| || |||| |||||||||||||||||||||||||
Sbjct: 4775 cagctccgccacgccggcatcatcgacatccagttc 4740
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 4244 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 4186
>gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022092, whole
genome shotgun sequence
Length = 10831
Score = 123 bits (62), Expect = 1e-025
Identities = 146/174 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 7592 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 7651
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 7652 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 7711
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 7712 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 7765
Score = 115 bits (58), Expect = 3e-023
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
|||||||||||||||||||| ||||| | || || | ||||||||||||||||||||
Sbjct: 6715 tcatcaccgacatgaactactacccgg---tggctccgttccacttcgacctcagcggca 6771
Query: 123 ccgccttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatca 182
| || ||||||||||| |||||||| |||| ||||||| | ||||||| | |||||||||
Sbjct: 6772 cggcgttcggcaggctcgccaagcctggcctcaacgacaagctgcgccactccggcatca 6831
Query: 183 tcgacatccagttcgccagg 202
|||||||| ||||| |||||
Sbjct: 6832 tcgacatcgagttcaccagg 6851
Score = 89.7 bits (45), Expect = 2e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct: 7426 cagggtgccatgcgagttcccggggctcaagatcgggttccacgtggaggagtactcgaa 7485
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| || |||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 7486 ccctgtgtacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 7545
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 7546 ggacctgatggag 7558
>gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005724, whole
genome shotgun sequence
Length = 15116
Score = 121 bits (61), Expect = 5e-025
Identities = 156/187 (83%), Gaps = 3/187 (1%)
Strand = Plus / Plus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 14835 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 14891
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 14892 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 14951
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 14952 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 15011
Query: 213 agttccc 219
|||||||
Sbjct: 15012 agttccc 15018
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 4340 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 4281
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 4280 gagctccgccacgccggcatcatcgacatccagttc 4245
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 3839 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 3786
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 3740 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 3681
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 3680 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 3628
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 121 bits (61), Expect = 5e-025
Identities = 156/187 (83%), Gaps = 3/187 (1%)
Strand = Plus / Minus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 187394 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 187338
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 187337 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 187278
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 187277 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 187218
Query: 213 agttccc 219
|||||||
Sbjct: 187217 agttccc 187211
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 197889 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 197948
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 197949 gagctccgccacgccggcatcatcgacatccagttc 197984
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 198390 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 198443
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 198489 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 198548
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 198549 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 198601
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 121 bits (61), Expect = 5e-025
Identities = 156/187 (83%), Gaps = 3/187 (1%)
Strand = Plus / Minus
Query: 33 ccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactacaccccgggcg 92
|||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |
Sbjct: 379756 ccgcctgctccggcaacgcccagaccgtcgccatcaccgacatgaactacttccc---cc 379700
Query: 93 tcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggcc 152
|| | | |||||||||||||||||||||| |||||||||| | || |||||||||||||
Sbjct: 379699 tctcccagtaccacttcgacctcagcggcatcgccttcggccgcctcgccaagcccggcc 379640
Query: 153 gcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcg 212
|| ||||||||| |||||||| || ||||||||| | |||||||| | || || ||||
Sbjct: 379639 gcgccgacgacctccgccgcgcggggatcatcgacgtgcagttcgcgcgcgtgccgtgcg 379580
Query: 213 agttccc 219
|||||||
Sbjct: 379579 agttccc 379573
Score = 87.7 bits (44), Expect = 7e-015
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || |||||| |||||||| | ||||||||||
Sbjct: 390251 taccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgac 390310
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttc 196
|| || |||| |||||||||||||||||||||||||
Sbjct: 390311 gagctccgccacgccggcatcatcgacatccagttc 390346
Score = 52.0 bits (26), Expect = 4e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 278 ctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
||||| |||||||||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 390752 ctggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggag 390805
Score = 42.1 bits (21), Expect = 0.35
Identities = 90/113 (79%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| |||||||| || ||| | || ||| ||||||||| |||
Sbjct: 390851 tggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctg 390910
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgc 459
||| ||||||||| |||||| | || ||| ||||||||||| ||| ||||
Sbjct: 390911 caggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgc 390963
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full
insert sequence
Length = 1313
Score = 117 bits (59), Expect = 7e-024
Identities = 188/231 (81%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 487 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 546
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| ||||||||||||||||||||||||| ||||| || ||| | |||||
Sbjct: 547 cagctccgccacgccggcatcatcgacatccagttcaagagggtgccgtgcaacttccct 606
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
|| || ||||| |||||||| ||||| || || | || ||| |||||||| ||||||
Sbjct: 607 gggctgaaggtgacgttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctg 666
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| ||||||||| |||||||||||||||| || ||||| || |||||||||
Sbjct: 667 gttgagtacgaggacggcgacggcgacgtggtgcaggtggatctcatggag 717
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 733 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 791
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full
insert sequence
Length = 1031
Score = 117 bits (59), Expect = 7e-024
Identities = 188/231 (81%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 231 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 290
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| ||||||||||||||||||||||||| ||||| || ||| | |||||
Sbjct: 291 cagctccgccacgccggcatcatcgacatccagttcaagagggtgccgtgcaacttccct 350
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
|| || ||||| |||||||| ||||| || || | || ||| |||||||| ||||||
Sbjct: 351 gggctgaaggtgacgttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctg 410
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| ||||||||| |||||||||||||||| || ||||| || |||||||||
Sbjct: 411 gttgagtacgaggacggcgacggcgacgtggtgcaggtggatctcatggag 461
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 477 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 535
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3
(OSJNBb0014I11.1), mRNA
Length = 904
Score = 117 bits (59), Expect = 7e-024
Identities = 188/231 (81%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 476 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 535
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| ||||||||||||||||||||||||| ||||| || ||| | |||||
Sbjct: 536 cagctccgccacgccggcatcatcgacatccagttcaagagggtgccgtgcaacttccct 595
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
|| || ||||| |||||||| ||||| || || | || ||| |||||||| ||||||
Sbjct: 596 gggctgaaggtgacgttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctg 655
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| ||||||||| |||||||||||||||| || ||||| || |||||||||
Sbjct: 656 gttgagtacgaggacggcgacggcgacgtggtgcaggtggatctcatggag 706
Score = 61.9 bits (31), Expect = 4e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 722 tggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcct 780
>gb|C96991.1|C96991 C96991 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50438_8Z, mRNA sequence
Length = 633
Score = 115 bits (58), Expect = 3e-023
Identities = 146/174 (83%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 126 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 185
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| || ||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 186 cagcc-cctttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 244
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 245 gtcatcccggccaactggaggcccaacacattctaccgctccttcgtccagtac 298
>gb|AU093543.1|AU093543 AU093543 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51295, mRNA sequence
Length = 634
Score = 111 bits (56), Expect = 5e-022
Identities = 131/156 (83%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||||| |||| ||||| ||||||||| | || ||| |||||||| | ||
Sbjct: 130 tggacgccgatgagggagtcgtggggctccatctggaggctggacaccaaccacaggctc 189
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||| | |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 190 caggcccccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaac 249
Query: 467 gtcatcccactcaactggaggccaaacacattctac 502
|||||||| |||||||||||| ||||||||||||
Sbjct: 250 gtcatcccggccaactggaggcccaacacattctac 285
Score = 63.9 bits (32), Expect = 1e-007
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 269 ttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatg 328
||||| |||||||| ||||||||| |||||||||||||| | || ||||| ||||| |||
Sbjct: 34 ttcgcggtgctggtggagtacgaggacggcgacggcgacntggtgcaggtggacctgatg 93
Query: 329 gag 331
|||
Sbjct: 94 gag 96
>gb|AU173230.1|AU173230 AU173230 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1787, mRNA sequence
Length = 463
Score = 103 bits (52), Expect = 1e-019
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 413 cccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgacgtcatc 472
|||||||||||||||| ||||| ||| |||||||||||||||||||| | ||||||||
Sbjct: 23 cccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaacgtcatc 82
Query: 473 ccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 83 ccggccaactggaggcccaacacattctaccgctccttcgtccagtac 130
>gb|AU184180.1|AU184180 AU184180 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1486, mRNA sequence
Length = 449
Score = 103 bits (52), Expect = 1e-019
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 413 cccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgacgtcatc 472
|||||||||||||||| ||||| ||| |||||||||||||||||||| | ||||||||
Sbjct: 10 cccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaacgtcatc 69
Query: 473 ccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|| |||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 70 ccggccaactggaggcccaacacattctaccgctccttcgtccagtac 117
>gb|AU184078.1|AU184078 AU184078 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0912, mRNA sequence
Length = 444
Score = 97.6 bits (49), Expect = 7e-018
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 416 ttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgacgtcatccca 475
||||||||||||| ||||| ||| |||||||||||||||||||| | ||||||||||
Sbjct: 1 ttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccaacaacgtcatcccg 60
Query: 476 ctcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||||||| |||||||||||| | ||| |||||||||||
Sbjct: 61 gccaactggaggcccaacacattctaccgctccttcgtccagtac 105
>gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60311_1A, mRNA sequence
Length = 378
Score = 95.6 bits (48), Expect = 3e-017
Identities = 186/231 (80%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
|||||||||||||| |||||||| || |||||| |||||||||| || | ||||||
Sbjct: 115 taccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgac 174
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| ||||||||||||||||||||||||| ||||| || ||| | |||||
Sbjct: 175 cagctccgccacgccggcatcatcgacatccagttcaagagggtgccgtgcaanttccct 234
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgct- 279
|| || ||||| |||||||| ||||| || || | | ||| |||||||| |||||
Sbjct: 235 gggctgaaggtgacgttccacgtggaggaggggtcgaaaccggtgtacttcgcggtgctg 294
Query: 280 ggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatgga 330
||| ||||||||| |||||||||||||||| || ||||| || ||||||||
Sbjct: 295 ggttgagtacgaggacggcgacggcgacgtggtgcaggtggatctcatgga 345
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 988,978
Number of Sequences: 438736
Number of extensions: 988978
Number of successful extensions: 39946
Number of sequences better than 0.5: 135
Number of HSP's better than 0.5 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37728
Number of HSP's gapped (non-prelim): 2160
length of query: 621
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 600
effective length of database: 2,791,206,460
effective search space: 1674723876000
effective search space used: 1674723876000
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)