BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943966.2.1
(599 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU101479.1|AU101479 AU101479 Rice immature leaf includin... 206 1e-050
gb|CB650869.1|CB650869 OSJNEb15J05.f OSJNEb Oryza sativa (j... 206 1e-050
gb|CB651300.1|CB651300 OSJNEb16D09.f OSJNEb Oryza sativa (j... 206 1e-050
gb|CB651301.1|CB651301 OSJNEb16D09.r OSJNEb Oryza sativa (j... 206 1e-050
gb|CB680447.1|CB680447 OSJNEf05C19.r OSJNEf Oryza sativa (j... 206 1e-050
gb|CV721863.1|CV721863 YBH--05-J11.b1 Rice before heading y... 206 1e-050
dbj|AK071482.1| Oryza sativa (japonica cultivar-group) cDNA... 206 1e-050
dbj|AK104326.1| Oryza sativa (japonica cultivar-group) cDNA... 206 1e-050
dbj|AK104801.1| Oryza sativa (japonica cultivar-group) cDNA... 206 1e-050
gb|AY644637.1| Oryza sativa (japonica cultivar-group) caffe... 206 1e-050
dbj|AP000364.1| Oryza sativa (japonica cultivar-group) geno... 206 1e-050
gb|AACV01018795.1| Oryza sativa (japonica cultivar-group) c... 206 1e-050
ref|XM_483167.1| Oryza sativa (japonica cultivar-group), mRNA 206 1e-050
ref|XM_507281.2| PREDICTED Oryza sativa (japonica cultivar-... 206 1e-050
ref|XM_507591.1| PREDICTED Oryza sativa (japonica cultivar-... 206 1e-050
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 206 1e-050
dbj|AB110168.1| Oryza sativa (japonica cultivar-group) mRNA... 206 1e-050
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 206 1e-050
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 206 1e-050
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 206 1e-050
gb|AU164542.1|AU164542 AU164542 Rice root Oryza sativa (jap... 200 6e-049
gb|AU197917.1|AU197917 AU197917 Rice green shoot Oryza sati... 200 6e-049
gb|AU197920.1|AU197920 AU197920 Rice green shoot Oryza sati... 200 6e-049
gb|AU184482.1|AU184482 AU184482 Rice root Oryza sativa (jap... 196 1e-047
gb|CV721179.1|CV721179 YBH--03-D01.b1 Rice before heading y... 196 1e-047
gb|AU162815.1|AU162815 AU162815 Rice green shoot Oryza sati... 190 6e-046
gb|AU162915.1|AU162915 AU162915 Rice green shoot Oryza sati... 190 6e-046
gb|AU030740.1|AU030740 AU030740 Rice cDNA from immature lea... 182 1e-043
gb|AU096741.1|AU096741 AU096741 Rice green shoot Oryza sati... 182 1e-043
gb|AU095746.1|AU095746 AU095746 Rice green shoot Oryza sati... 178 2e-042
gb|AU095774.1|AU095774 AU095774 Rice green shoot Oryza sati... 178 2e-042
gb|AU096666.1|AU096666 AU096666 Rice green shoot Oryza sati... 178 2e-042
gb|CX728127.1|CX728127 OSJNEe01K02.r OSJNEe Oryza sativa (j... 170 5e-040
gb|CA755835.1|CA755835 BR030029000_PLATE_D01_4_012.ab1 OA O... 167 9e-039
gb|AU095745.1|AU095745 AU095745 Rice green shoot Oryza sati... 161 5e-037
gb|CB650397.1|CB650397 OSJNEb14N03.f OSJNEb Oryza sativa (j... 159 2e-036
gb|CF589246.1|CF589246 EST00H03 Subtracted cDNA library of ... 157 8e-036
gb|AU057944.1|AU057944 AU057944 Oryza sativa mature leaf Ni... 153 1e-034
gb|AU197965.1|AU197965 AU197965 Rice green shoot Oryza sati... 151 5e-034
gb|AU164541.1|AU164541 AU164541 Rice root Oryza sativa (jap... 133 1e-028
gb|AU197908.1|AU197908 AU197908 Rice green shoot Oryza sati... 131 5e-028
gb|D48033.1|D48033 RICS13955A Rice green shoot Oryza sativa... 125 3e-026
gb|BP184507.1|BP184507 BP184507 pNS rice panicle cDNA, germ... 125 3e-026
gb|BP184560.1|BP184560 BP184560 pNS rice panicle cDNA, flow... 125 3e-026
gb|AU057626.1|AU057626 AU057626 Oryza sativa mature leaf Ni... 121 5e-025
gb|BP184421.1|BP184421 BP184421 pNS rice panicle cDNA, germ... 101 4e-019
gb|AU222863.1|AU222863 AU222863 Rice shoot Oryza sativa (ja... 86 3e-014
gb|CB669265.1|CB669265 OSJNEe01K02.f OSJNEe Oryza sativa (j... 84 1e-013
gb|AU030405.1|AU030405 AU030405 Rice cDNA from immature lea... 76 2e-011
gb|AU096701.1|AU096701 AU096701 Rice green shoot Oryza sati... 76 2e-011
gb|CB682841.1|CB682841 OSJNEf10I23.f OSJNEf Oryza sativa (j... 76 2e-011
gb|CX728657.1|CX728657 OSJNEf10I23.r OSJNEf Oryza sativa (j... 76 2e-011
gb|CF308395.1|CF308395 ABF--02-D07.g1 ABF3-overexpressing t... 74 1e-010
gb|CO435814.1|CO435814 OsMR880 5MT resistant rice mutant cD... 74 1e-010
dbj|AK061757.1| Oryza sativa (japonica cultivar-group) cDNA... 74 1e-010
dbj|AK065515.1| Oryza sativa (japonica cultivar-group) cDNA... 74 1e-010
ref|XM_483169.1| Oryza sativa (japonica cultivar-group), mRNA 74 1e-010
ref|XM_483170.1| Oryza sativa (japonica cultivar-group), mRNA 74 1e-010
ref|XM_507282.1| PREDICTED Oryza sativa (japonica cultivar-... 74 1e-010
gb|AU032753.1|AU032753 AU032753 Rice green shoot Oryza sati... 72 4e-010
gb|AU096278.1|AU096278 AU096278 Rice green shoot Oryza sati... 70 1e-009
gb|AU198011.1|AU198011 AU198011 Rice green shoot Oryza sati... 70 1e-009
gb|C99197.1|C99197 C99197 Rice panicle at ripening stage Or... 64 9e-008
gb|AU182287.1|AU182287 AU182287 Rice panicle at flowering s... 64 9e-008
gb|CB653598.1|CB653598 OSJNEc04M15.f OSJNEc Oryza sativa (j... 64 9e-008
gb|CB653599.1|CB653599 OSJNEc04M15.r OSJNEc Oryza sativa (j... 64 9e-008
gb|CF293402.1|CF293402 30DGS--02-J06.g1 Rice leaf plasmid c... 64 9e-008
dbj|AK065744.1| Oryza sativa (japonica cultivar-group) cDNA... 64 9e-008
gb|AY644636.1| Oryza sativa (japonica cultivar-group) caffe... 64 9e-008
gb|AACV01013091.1| Oryza sativa (japonica cultivar-group) c... 64 9e-008
dbj|AB023482.2| Oryza sativa (japonica cultivar-group) geno... 64 9e-008
dbj|AP002536.2| Oryza sativa (japonica cultivar-group) geno... 64 9e-008
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 64 9e-008
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 64 9e-008
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 64 9e-008
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 64 9e-008
gb|AU163080.1|AU163080 AU163080 Rice green shoot Oryza sati... 60 1e-006
dbj|AK106735.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
gb|AY644638.1| Oryza sativa (japonica cultivar-group) caffe... 60 1e-006
gb|CF312395.1|CF312395 ABF--08-C02.g1 ABF3-overexpressing t... 56 2e-005
gb|AU197418.1|AU197418 AU197418 Rice cDNA from young root O... 50 0.001
dbj|AK108479.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AACV01020268.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 50 0.001
dbj|AP005392.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AU198028.1|AU198028 AU198028 Rice green shoot Oryza sati... 44 0.085
gb|AACV01030826.1| Oryza sativa (japonica cultivar-group) C... 44 0.085
dbj|AG208854.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.34
gb|AC120990.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
gb|AC120986.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
gb|AACV01012729.1| Oryza sativa (japonica cultivar-group) c... 42 0.34
gb|AACV01030495.1| Oryza sativa (japonica cultivar-group) C... 42 0.34
ref|NT_107221.1| Oryza sativa (japonica cultivar-group) 42 0.34
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.34
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 42 0.34
>gb|AU101479.1|AU101479 AU101479 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50819, mRNA sequence
Length = 614
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 428 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 369
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 368 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccagtccagg 309
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 308 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 249
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 248 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 189
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 188 ggcttgtccgcgtccacgaacgcgaagtcgaa 157
>gb|CB650869.1|CB650869 OSJNEb15J05.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15J05 5', mRNA sequence
Length = 866
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 819 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 760
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 759 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 700
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 699 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 640
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 639 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 580
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 579 ggcttgtccgcgtccacgaacgcgaagtcgaa 548
>gb|CB651300.1|CB651300 OSJNEb16D09.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16D09 5', mRNA sequence
Length = 641
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 470 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 411
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 410 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 351
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 350 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 291
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 290 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 231
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 230 ggcttgtccgcgtccacgaacgcgaagtcgaa 199
>gb|CB651301.1|CB651301 OSJNEb16D09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16D09 3', mRNA sequence
Length = 774
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 172 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 231
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 232 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 291
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 292 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 351
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 352 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 411
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 412 ggcttgtccgcgtccacgaacgcgaagtcgaa 443
>gb|CB680447.1|CB680447 OSJNEf05C19.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf05C19 3', mRNA sequence
Length = 756
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 261 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 320
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 321 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 380
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 381 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 440
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 441 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 500
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 501 ggcttgtccgcgtccacgaacgcgaagtcgaa 532
>gb|CV721863.1|CV721863 YBH--05-J11.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--05-J11, mRNA sequence
Length = 455
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 342 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 283
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 282 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 223
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 222 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 163
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 162 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 103
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 102 ggcttgtccgcgtccacgaacgcgaagtcgaa 71
>dbj|AK071482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093N24, full
insert sequence
Length = 1098
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 834 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 775
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 774 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 715
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 714 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 655
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 654 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 595
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 594 ggcttgtccgcgtccacgaacgcgaagtcgaa 563
>dbj|AK104326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F10, full
insert sequence
Length = 996
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 825 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 766
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 765 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 706
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 705 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 646
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 645 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 586
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 585 ggcttgtccgcgtccacgaacgcgaagtcgaa 554
>dbj|AK104801.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C03, full
insert sequence
Length = 1096
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 832 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 773
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 772 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 713
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 712 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 653
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 652 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 593
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 592 ggcttgtccgcgtccacgaacgcgaagtcgaa 561
>gb|AY644637.1| Oryza sativa (japonica cultivar-group) caffeoyl-CoA
O-methyltransferase (COA20) gene, complete cds
Length = 1158
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 1054 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 995
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 994 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 935
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 934 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 875
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 874 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 815
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 814 ggcttgtccgcgtccacgaacgcgaagtcgaa 783
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0026F07
Length = 137354
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 87895 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 87954
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 87955 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 88014
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 88015 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 88074
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 88075 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 88134
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 88135 ggcttgtccgcgtccacgaacgcgaagtcgaa 88166
Score = 73.8 bits (37), Expect = 1e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 378 gccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgcaccagg 437
||||||| ||||| |||||||||||||||||| | | ||||||| ||||||||||
Sbjct: 94676 gccacggacccgccccagagcgtgttgtcgtaggccagcacgccgccggcgcgcaccagc 94735
Query: 438 cggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaaggcgaag 497
|| |||||| |||||||||| | | |||||| |||||||||||| ||||| ||||||
Sbjct: 94736 cgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtccacgaacgcgaag 94795
Query: 498 tcgaa 502
|||||
Sbjct: 94796 tcgaa 94800
Score = 60.0 bits (30), Expect = 1e-006
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 372 ggcatggccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgc 431
||||| ||||||| ||||| ||| ||||||||||||||| ||| |||||||||||||
Sbjct: 99072 ggcattgccacggacccgccccacagcgtgttgtcgtacgcgaccacgccgccgacgcgc 99131
Query: 432 accaggcggagcagctgctcgtggta 457
| ||| || | |||| ||||||||||
Sbjct: 99132 agcagccgcaccagccgctcgtggta 99157
Score = 46.1 bits (23), Expect = 0.022
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 552 gcggggccctcgcggaagtcgaccttg 578
|||| ||||||||||||||||||||||
Sbjct: 94934 gcggcgccctcgcggaagtcgaccttg 94960
>gb|AACV01018795.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018795, whole
genome shotgun sequence
Length = 16642
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 2244 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 2303
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 2304 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 2363
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 2364 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 2423
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 2424 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 2483
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 2484 ggcttgtccgcgtccacgaacgcgaagtcgaa 2515
Score = 73.8 bits (37), Expect = 1e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 378 gccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgcaccagg 437
||||||| ||||| |||||||||||||||||| | | ||||||| ||||||||||
Sbjct: 9029 gccacggacccgccccagagcgtgttgtcgtaggccagcacgccgccggcgcgcaccagc 9088
Query: 438 cggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaaggcgaag 497
|| |||||| |||||||||| | | |||||| |||||||||||| ||||| ||||||
Sbjct: 9089 cgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtccacgaacgcgaag 9148
Query: 498 tcgaa 502
|||||
Sbjct: 9149 tcgaa 9153
Score = 46.1 bits (23), Expect = 0.022
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 372 ggcatggccacggtcccg-caccagagcgtgttgtcgtacacgatggtgccgccgacgcg 430
||||| ||||||| |||| | ||| ||||||||||||||| ||| ||||||||||||
Sbjct: 13425 ggcattgccacggacccggccccacagcgtgttgtcgtacgcgaccaagccgccgacgcg 13484
Query: 431 caccaggcggagcagctgctcgtggta 457
|| ||| || | |||| ||||||||||
Sbjct: 13485 cagcagccgcaccagccgctcgtggta 13511
Score = 46.1 bits (23), Expect = 0.022
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 552 gcggggccctcgcggaagtcgaccttg 578
|||| ||||||||||||||||||||||
Sbjct: 9287 gcggcgccctcgcggaagtcgaccttg 9313
>ref|XM_483167.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 996
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 825 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 766
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 765 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 706
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 705 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 646
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 645 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 586
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 585 ggcttgtccgcgtccacgaacgcgaagtcgaa 554
>ref|XM_507281.2| PREDICTED Oryza sativa (japonica cultivar-group), P0026F07.24 mRNA
Length = 1098
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 834 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 775
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 774 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 715
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 714 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 655
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 654 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 595
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 594 ggcttgtccgcgtccacgaacgcgaagtcgaa 563
>ref|XM_507591.1| PREDICTED Oryza sativa (japonica cultivar-group), P0026F07.24 mRNA
Length = 1096
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 832 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 773
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 772 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 713
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 712 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 653
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 652 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 593
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 592 ggcttgtccgcgtccacgaacgcgaagtcgaa 561
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 24341548 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 24341607
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 24341608 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 24341667
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 24341668 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 24341727
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 24341728 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 24341787
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 24341788 ggcttgtccgcgtccacgaacgcgaagtcgaa 24341819
Score = 73.8 bits (37), Expect = 1e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 378 gccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgcaccagg 437
||||||| ||||| |||||||||||||||||| | | ||||||| ||||||||||
Sbjct: 24348329 gccacggacccgccccagagcgtgttgtcgtaggccagcacgccgccggcgcgcaccagc 24348388
Query: 438 cggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaaggcgaag 497
|| |||||| |||||||||| | | |||||| |||||||||||| ||||| ||||||
Sbjct: 24348389 cgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtccacgaacgcgaag 24348448
Query: 498 tcgaa 502
|||||
Sbjct: 24348449 tcgaa 24348453
Score = 60.0 bits (30), Expect = 1e-006
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 372 ggcatggccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgc 431
||||| ||||||| ||||| ||| ||||||||||||||| ||| |||||||||||||
Sbjct: 24352725 ggcattgccacggacccgccccacagcgtgttgtcgtacgcgaccacgccgccgacgcgc 24352784
Query: 432 accaggcggagcagctgctcgtggta 457
| ||| || | |||| ||||||||||
Sbjct: 24352785 agcagccgcaccagccgctcgtggta 24352810
Score = 46.1 bits (23), Expect = 0.022
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 552 gcggggccctcgcggaagtcgaccttg 578
|||| ||||||||||||||||||||||
Sbjct: 24348587 gcggcgccctcgcggaagtcgaccttg 24348613
>dbj|AB110168.1| Oryza sativa (japonica cultivar-group) mRNA for caffeoyl-CoA
3-O-methyltransferase, complete cds, clone: 12FPR057
Length = 976
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 802 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 743
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 742 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 683
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 682 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 623
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 622 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 563
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 562 ggcttgtccgcgtccacgaacgcgaagtcgaa 531
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 15825878 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 15825937
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 15825938 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 15825997
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 15825998 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 15826057
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 15826058 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 15826117
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 15826118 ggcttgtccgcgtccacgaacgcgaagtcgaa 15826149
Score = 73.8 bits (37), Expect = 1e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 378 gccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgcaccagg 437
||||||| ||||| |||||||||||||||||| | | ||||||| ||||||||||
Sbjct: 15832663 gccacggacccgccccagagcgtgttgtcgtaggccagcacgccgccggcgcgcaccagc 15832722
Query: 438 cggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaaggcgaag 497
|| |||||| |||||||||| | | |||||| |||||||||||| ||||| ||||||
Sbjct: 15832723 cgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtccacgaacgcgaag 15832782
Query: 498 tcgaa 502
|||||
Sbjct: 15832783 tcgaa 15832787
Score = 46.1 bits (23), Expect = 0.022
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 372 ggcatggccacggtcccg-caccagagcgtgttgtcgtacacgatggtgccgccgacgcg 430
||||| ||||||| |||| | ||| ||||||||||||||| ||| ||||||||||||
Sbjct: 15837059 ggcattgccacggacccggccccacagcgtgttgtcgtacgcgaccaagccgccgacgcg 15837118
Query: 431 caccaggcggagcagctgctcgtggta 457
|| ||| || | |||| ||||||||||
Sbjct: 15837119 cagcagccgcaccagccgctcgtggta 15837145
Score = 46.1 bits (23), Expect = 0.022
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 552 gcggggccctcgcggaagtcgaccttg 578
|||| ||||||||||||||||||||||
Sbjct: 15832921 gcggcgccctcgcggaagtcgaccttg 15832947
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 23427884 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 23427943
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 23427944 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 23428003
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 23428004 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 23428063
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 23428064 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 23428123
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 23428124 ggcttgtccgcgtccacgaacgcgaagtcgaa 23428155
Score = 73.8 bits (37), Expect = 1e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 378 gccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgcaccagg 437
||||||| ||||| |||||||||||||||||| | | ||||||| ||||||||||
Sbjct: 23434669 gccacggacccgccccagagcgtgttgtcgtaggccagcacgccgccggcgcgcaccagc 23434728
Query: 438 cggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaaggcgaag 497
|| |||||| |||||||||| | | |||||| |||||||||||| ||||| ||||||
Sbjct: 23434729 cgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtccacgaacgcgaag 23434788
Query: 498 tcgaa 502
|||||
Sbjct: 23434789 tcgaa 23434793
Score = 46.1 bits (23), Expect = 0.022
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 372 ggcatggccacggtcccg-caccagagcgtgttgtcgtacacgatggtgccgccgacgcg 430
||||| ||||||| |||| | ||| ||||||||||||||| ||| ||||||||||||
Sbjct: 23439065 ggcattgccacggacccggccccacagcgtgttgtcgtacgcgaccaagccgccgacgcg 23439124
Query: 431 caccaggcggagcagctgctcgtggta 457
|| ||| || | |||| ||||||||||
Sbjct: 23439125 cagcagccgcaccagccgctcgtggta 23439151
Score = 46.1 bits (23), Expect = 0.022
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 552 gcggggccctcgcggaagtcgaccttg 578
|||| ||||||||||||||||||||||
Sbjct: 23434927 gcggcgccctcgcggaagtcgaccttg 23434953
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 206 bits (104), Expect = 1e-050
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 24579635 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 24579694
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 24579695 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 24579754
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 24579755 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 24579814
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 24579815 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 24579874
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 24579875 ggcttgtccgcgtccacgaacgcgaagtcgaa 24579906
Score = 73.8 bits (37), Expect = 1e-010
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 378 gccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgcaccagg 437
||||||| ||||| |||||||||||||||||| | | ||||||| ||||||||||
Sbjct: 24586416 gccacggacccgccccagagcgtgttgtcgtaggccagcacgccgccggcgcgcaccagc 24586475
Query: 438 cggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaaggcgaag 497
|| |||||| |||||||||| | | |||||| |||||||||||| ||||| ||||||
Sbjct: 24586476 cgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtccacgaacgcgaag 24586535
Query: 498 tcgaa 502
|||||
Sbjct: 24586536 tcgaa 24586540
Score = 60.0 bits (30), Expect = 1e-006
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 372 ggcatggccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgc 431
||||| ||||||| ||||| ||| ||||||||||||||| ||| |||||||||||||
Sbjct: 24590812 ggcattgccacggacccgccccacagcgtgttgtcgtacgcgaccacgccgccgacgcgc 24590871
Query: 432 accaggcggagcagctgctcgtggta 457
| ||| || | |||| ||||||||||
Sbjct: 24590872 agcagccgcaccagccgctcgtggta 24590897
Score = 46.1 bits (23), Expect = 0.022
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 552 gcggggccctcgcggaagtcgaccttg 578
|||| ||||||||||||||||||||||
Sbjct: 24586674 gcggcgccctcgcggaagtcgaccttg 24586700
>gb|AU164542.1|AU164542 AU164542 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0434, mRNA sequence
Length = 671
Score = 200 bits (101), Expect = 6e-049
Identities = 229/272 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 461 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 402
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | || ||||||| ||| | |
Sbjct: 401 gggtcggcggcgagcctggagttgaggtccctgatggcgacgganaacctccggtccagg 342
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 341 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 282
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 281 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 222
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 221 ggcttgtccgcgtccacgaacgcgaagtcgaa 190
>gb|AU197917.1|AU197917 AU197917 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13162, mRNA sequence
Length = 456
Score = 200 bits (101), Expect = 6e-049
Identities = 227/269 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 269 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 210
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 209 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 150
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 149 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 90
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 89 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 30
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtc 499
|||||||| ||||| ||||| ||||||||
Sbjct: 29 ggcttgtccgcgtccacgaacgcgaagtc 1
>gb|AU197920.1|AU197920 AU197920 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13186, mRNA sequence
Length = 456
Score = 200 bits (101), Expect = 6e-049
Identities = 227/269 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 269 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 210
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 209 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 150
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 149 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 90
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 89 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 30
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtc 499
|||||||| ||||| ||||| ||||||||
Sbjct: 29 ggcttgtccgcgtccacgaacgcgaagtc 1
>gb|AU184482.1|AU184482 AU184482 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2427, mRNA sequence
Length = 450
Score = 196 bits (99), Expect = 1e-047
Identities = 227/270 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 270 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 211
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | || ||||||| ||| | |
Sbjct: 210 gggtcggcggcgagcctggagttgaggtccctgatggcgacgganaacctccggtccagg 151
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 150 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 91
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 90 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 31
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcg 500
|||||||| ||||| ||||| |||||||||
Sbjct: 30 ggcttgtccgcgtccacgaacgcgaagtcg 1
>gb|CV721179.1|CV721179 YBH--03-D01.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-D01, mRNA sequence
Length = 375
Score = 196 bits (99), Expect = 1e-047
Identities = 227/270 (84%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 303 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 244
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| || | |
Sbjct: 243 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccgntccagg 184
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 183 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 124
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 123 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 64
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcg 500
|||||||| ||||| ||||| |||||||||
Sbjct: 63 ggcttgtccgcgtccacgaacgcgaagtcg 34
>gb|AU162815.1|AU162815 AU162815 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10737, mRNA sequence
Length = 686
Score = 190 bits (96), Expect = 6e-046
Identities = 229/272 (84%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 498 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 439
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 438 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 379
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 378 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 319
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||
Sbjct: 318 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 260
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 259 ggcttgtccgcgtccacgaacgcgaagtcgaa 228
>gb|AU162915.1|AU162915 AU162915 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13127, mRNA sequence
Length = 611
Score = 190 bits (96), Expect = 6e-046
Identities = 229/272 (84%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 424 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 365
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 364 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 305
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 304 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 245
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||
Sbjct: 244 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 186
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 185 ggcttgtccgcgtccacgaacgcgaagtcgaa 154
>gb|AU030740.1|AU030740 AU030740 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60171_2Z, mRNA sequence
Length = 639
Score = 182 bits (92), Expect = 1e-043
Identities = 229/272 (84%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 382 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 323
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 322 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 263
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 262 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 203
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||
Sbjct: 202 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 144
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 143 ggcttgtc-gcgtccacgaacgcgaagtcgaa 113
>gb|AU096741.1|AU096741 AU096741 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14884, mRNA sequence
Length = 598
Score = 182 bits (92), Expect = 1e-043
Identities = 229/272 (84%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 452 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 393
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 392 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 333
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| | |||| || ||| ||| |||||||||||||||
Sbjct: 332 tccgacagcggcgtgtccggcggcacg-ccaccgtgccggcccacagcgtgttgtcgtac 274
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||
Sbjct: 273 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 215
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 214 ggcttgtccgcgtccacgaacgcgaagtcgaa 183
>gb|AU095746.1|AU095746 AU095746 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10679, mRNA sequence
Length = 554
Score = 178 bits (90), Expect = 2e-042
Identities = 228/272 (83%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 362 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 303
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | ||||||| || ||| | |
Sbjct: 302 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaaccnccggtccagg 243
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
|||||| ||||| ||||| |||| |||||| || ||| ||| |||||||||||||||
Sbjct: 242 nccgacagcggcgtgtccggcggca-ggccaccgtgccggcccacagcgtgttgtcgtac 184
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||
Sbjct: 183 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 125
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 124 ggcttgtccgcgtccacgaacgcgaagtcgaa 93
>gb|AU095774.1|AU095774 AU095774 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10878, mRNA sequence
Length = 611
Score = 178 bits (90), Expect = 2e-042
Identities = 227/272 (83%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 328 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 269
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||| ||||||||||| | | |||||||| ||| | |
Sbjct: 268 gggtcggcggcgagcctggagttgaggnccctgatggcgacggngaacctccggtccagg 209
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 208 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 149
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||
Sbjct: 148 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 90
Query: 471 ggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|||||||| ||||| ||||| |||||||||||
Sbjct: 89 ggcttgtccgcgtccacgaacgcgaagtcgaa 58
>gb|AU096666.1|AU096666 AU096666 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14661, mRNA sequence
Length = 708
Score = 178 bits (90), Expect = 2e-042
Identities = 223/266 (83%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 439 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 380
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 379 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 320
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 319 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 260
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||
Sbjct: 259 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 201
Query: 471 ggcttgtcggcgtcgacgaaggcgaa 496
|||||||| ||||| ||||| |||||
Sbjct: 200 ggcttgtccgcgtccacgaacgcgaa 175
>gb|CX728127.1|CX728127 OSJNEe01K02.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01K02 3', mRNA sequence
Length = 432
Score = 170 bits (86), Expect = 5e-040
Identities = 203/242 (83%)
Strand = Plus / Plus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 191 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 250
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 251 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 310
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 311 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 370
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||
Sbjct: 371 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 430
Query: 471 gg 472
||
Sbjct: 431 gg 432
>gb|CA755835.1|CA755835 BR030029000_PLATE_D01_4_012.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030029000_PLATE_D01_4_012.ab1 similar to ESTs
AU030740(E60171),AU030739(E60171) correspond to a region
of the predicted gene.Similar to Populus tremuloides
caffeoyl-CoA 3-O-methyltransferase. (U27116) [Oryza
sativa (japonica cultivar-group)], mRNA sequence
Length = 877
Score = 167 bits (84), Expect = 9e-039
Identities = 165/192 (85%)
Strand = Plus / Minus
Query: 311 gttgaggtccctgatggcggccgagaacctcctgtcgatgtccgacatgggcgtctccgg 370
||||||||||||||||||| | |||||||||| ||| | |||||||| ||||| |||||
Sbjct: 821 gttgaggtccctgatggcgacggagaacctccggtccaggtccgacagcggcgtgtccgg 762
Query: 371 tggcatggccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcg 430
|||| ||||| || ||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 761 cggcagcgccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcg 702
Query: 431 caccaggcggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaa 490
|||||| | ||||||||||||||||| |||| ||||||||||||||| ||||| |||||
Sbjct: 701 caccagctgcagcagctgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaa 642
Query: 491 ggcgaagtcgaa 502
|||||||||||
Sbjct: 641 cgcgaagtcgaa 630
>gb|AU095745.1|AU095745 AU095745 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10673, mRNA sequence
Length = 541
Score = 161 bits (81), Expect = 5e-037
Identities = 226/273 (82%), Gaps = 2/273 (0%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 349 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 290
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||| ||||||||||| | ||||||| || ||| | |
Sbjct: 289 gggtcggcggcgagcctggagttgaggnccctgatggcgacggagaaccnccggtccagg 230
Query: 351 tccgacatgggcgtctccggtggcatggccacggt-cccgcaccagagcgtgttgtcgta 409
|||||| ||||| ||||| |||| ||||| || ||| ||| ||||||||||||||
Sbjct: 229 nccgacagcggcgtgtccggcggcagcgccaccgtgnccggcccacagcgtgttgtcgta 170
Query: 410 cacgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagtt 469
||||||| ||||||||||||||||| | ||||||||||||||||| |||| ||| ||
Sbjct: 169 cacgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-tt 111
Query: 470 gggcttgtcggcgtcgacgaaggcgaagtcgaa 502
||||||||| ||||| ||||| |||||||||||
Sbjct: 110 gggcttgtccgcgtccacgaacgcgaagtcgaa 78
>gb|CB650397.1|CB650397 OSJNEb14N03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14N03 5', mRNA sequence
Length = 756
Score = 159 bits (80), Expect = 2e-036
Identities = 164/192 (85%)
Strand = Plus / Minus
Query: 311 gttgaggtccctgatggcggccgagaacctcctgtcgatgtccgacatgggcgtctccgg 370
|||||||||| |||||||| | |||||||||| ||| | |||||||| ||||| |||||
Sbjct: 739 gttgaggtccttgatggcgacggagaacctccggtccaggtccgacagcggcgtgtccgg 680
Query: 371 tggcatggccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcg 430
|||| ||||| || ||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 679 cggcagcgccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcg 620
Query: 431 caccaggcggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaa 490
|||||| | ||||||||||||||||| |||| ||||||||||||||| ||||| |||||
Sbjct: 619 caccagctgcagcagctgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaa 560
Query: 491 ggcgaagtcgaa 502
|||||||||||
Sbjct: 559 cgcgaagtcgaa 548
>gb|CF589246.1|CF589246 EST00H03 Subtracted cDNA library of JA/BTH-treated rice leaf Oryza
sativa (japonica cultivar-group) cDNA clone JBI113, mRNA
sequence
Length = 799
Score = 157 bits (79), Expect = 8e-036
Identities = 160/187 (85%)
Strand = Plus / Minus
Query: 316 ggtccctgatggcggccgagaacctcctgtcgatgtccgacatgggcgtctccggtggca 375
|||||||||||||| | |||||||||| ||| | |||||||| ||||| ||||| ||||
Sbjct: 742 ggtccctgatggcgacggagaacctccggtccaggtccgacagcggcgtgtccggcggca 683
Query: 376 tggccacggtcccgcaccagagcgtgttgtcgtacacgatggtgccgccgacgcgcacca 435
||||| || ||| ||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 682 gcgccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcgcacca 623
Query: 436 ggcggagcagctgctcgtggtaattgaagtagttgggcttgtcggcgtcgacgaaggcga 495
| | ||||||||||||||||| |||| ||||||||||||||| ||||| ||||| ||||
Sbjct: 622 gctgcagcagctgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaacgcga 563
Query: 496 agtcgaa 502
|||||||
Sbjct: 562 agtcgaa 556
>gb|AU057944.1|AU057944 AU057944 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21928_2Z, mRNA sequence
Length = 635
Score = 153 bits (77), Expect = 1e-034
Identities = 227/273 (83%), Gaps = 3/273 (1%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 354 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 295
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 294 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 235
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| ||||| |||||||||
Sbjct: 234 tccgacagcggcgtgtccggcggcaacgccaccgtgccggcccacagcgt-ttgtcgtac 176
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgt-ggtaattgaagtagtt 469
|||||| ||||||||||||||||| | ||||||||||||| |||| |||| ||| ||
Sbjct: 175 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtgggtacttgacgta-tt 117
Query: 470 gggcttgtcggcgtcgacgaaggcgaagtcgaa 502
||||||||| ||||| ||||| ||||| |||||
Sbjct: 116 gggcttgtccgcgtccacgaacgcgaaatcgaa 84
>gb|AU197965.1|AU197965 AU197965 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13955, mRNA sequence
Length = 442
Score = 151 bits (76), Expect = 5e-034
Identities = 203/246 (82%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | || |
Sbjct: 257 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgccc 198
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | || ||||||| ||| | |
Sbjct: 197 gggtcggcggcgagcctggagttgaggtccctgatggcgacgganaacctccggtccagg 138
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 137 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 78
Query: 411 acgatggtgccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttg 470
|||||| ||||||||||||||||| | ||||||||||||||||| |||| | | |||
Sbjct: 77 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgnaattg 18
Query: 471 ggcttg 476
||||||
Sbjct: 17 ggcttg 12
>gb|AU164541.1|AU164541 AU164541 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0434, mRNA sequence
Length = 520
Score = 133 bits (67), Expect = 1e-028
Identities = 98/107 (91%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 396 agcgtgttgtcgtacacgatggtgccgccgacgcgcaccaggcggagcagctgctcgtgg 455
||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||
Sbjct: 455 agcgtgttgtcgtacacgatg-tgccgccgacgcgcaccagctgcagcagctgctcgtgg 397
Query: 456 taattgaagtagttgggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|| |||| ||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 396 tacttgacgtagttgggcttgtccgcgtccacgaacgcgaagtcgaa 350
>gb|AU197908.1|AU197908 AU197908 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12656, mRNA sequence
Length = 456
Score = 131 bits (66), Expect = 5e-028
Identities = 168/202 (83%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 202 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 143
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 142 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 83
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 82 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 23
Query: 411 acgatggtgccgccgacgcgca 432
|||||| |||||||||||||
Sbjct: 22 acgatgtgcccgccgacgcgca 1
>gb|D48033.1|D48033 RICS13955A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 316
Score = 125 bits (63), Expect = 3e-026
Identities = 96/107 (89%)
Strand = Plus / Minus
Query: 396 agcgtgttgtcgtacacgatggtgccgccgacgcgcaccaggcggagcagctgctcgtgg 455
||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 314 agcgtgttgtcgtacacgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtgg 255
Query: 456 taattgaagtagttgggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|| |||| ||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 254 tacttgacgtagttgggcttgtccgcgtccacgaacgcgaagtcgaa 208
>gb|BP184507.1|BP184507 BP184507 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 13FPG013,
mRNA sequence
Length = 686
Score = 125 bits (63), Expect = 3e-026
Identities = 96/107 (89%)
Strand = Plus / Minus
Query: 396 agcgtgttgtcgtacacgatggtgccgccgacgcgcaccaggcggagcagctgctcgtgg 455
||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 649 agcgtgttgtcgtacacgatgtgcccgccgacgcgcaccagttgcagcagctgctcgtgg 590
Query: 456 taattgaagtagttgggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|| |||| ||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 589 tacttgacgtagttgggcttgtccgcgtccacgaacgcgaagtcgaa 543
>gb|BP184560.1|BP184560 BP184560 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG001, mRNA
sequence
Length = 664
Score = 125 bits (63), Expect = 3e-026
Identities = 96/107 (89%)
Strand = Plus / Minus
Query: 396 agcgtgttgtcgtacacgatggtgccgccgacgcgcaccaggcggagcagctgctcgtgg 455
||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 655 agcgtgttgtcgtacacgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtgg 596
Query: 456 taattgaagtagttgggcttgtcggcgtcgacgaaggcgaagtcgaa 502
|| |||| ||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 595 tacttgacgtagttgggcttgtccgcgtccacgaacgcgaagtcgaa 549
>gb|AU057626.1|AU057626 AU057626 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21628_2Z, mRNA sequence
Length = 464
Score = 121 bits (61), Expect = 5e-025
Identities = 154/185 (83%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||||| || | ||||
Sbjct: 185 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 126
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | |||||||||| ||| | |
Sbjct: 125 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 66
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| ||| |||||||||||||||
Sbjct: 65 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 6
Query: 411 acgat 415
|||||
Sbjct: 5 acgat 1
>gb|BP184421.1|BP184421 BP184421 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 12FPR057,
mRNA sequence
Length = 624
Score = 101 bits (51), Expect = 4e-019
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 420 ccgccgacgcgcaccaggcggagcagctgctcgtggtaattgaagtagttgggcttgtcg 479
||||||||||||||||| | ||||||||||||||||| |||| |||||||||||||||
Sbjct: 613 ccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttgggcttgtcc 554
Query: 480 gcgtcgacgaaggcgaagtcgaa 502
||||| ||||| |||||||||||
Sbjct: 553 gcgtccacgaacgcgaagtcgaa 531
>gb|AU222863.1|AU222863 AU222863 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S1137, mRNA sequence
Length = 454
Score = 85.7 bits (43), Expect = 3e-014
Identities = 119/145 (82%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| || || || | ||||
Sbjct: 163 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcanacgtcgatgcgc 104
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||||| | || ||||||| ||| | |
Sbjct: 103 gggtcggcggcgagcctggagttgaggtccctgatggcgacgganaacctccggtccagg 44
Query: 351 tccgacatgggcgtctccggtggca 375
||||||| ||||| ||||| ||||
Sbjct: 43 tccgacagcggcgtgtccggcggca 19
>gb|CB669265.1|CB669265 OSJNEe01K02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01K02 5', mRNA sequence
Length = 383
Score = 83.8 bits (42), Expect = 1e-013
Identities = 150/186 (80%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagacctcaacgcgc 290
|||||||||||||| ||||||| ||||||||||||||||||||| ||| | || | ||||
Sbjct: 212 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagtcgtcgatgcgc 153
Query: 291 tcgtccgcggagaggcgaacgttgaggtccctgatggcggccgagaacctcctgtcgatg 350
||| |||| ||| | ||||||||||||||||| | | |||||||||| ||| | |
Sbjct: 152 gggtcggcggcgagcctggagttgaggtccctgatggagacggagaacctccggtccagg 93
Query: 351 tccgacatgggcgtctccggtggcatggccacggtcccgcaccagagcgtgttgtcgtac 410
||||||| ||||| ||||| |||| ||||| || ||| |||||||||||||||
Sbjct: 92 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcgggcagcgtgttgtcgtac 33
Query: 411 acgatg 416
||||||
Sbjct: 32 acgatg 27
>gb|AU030405.1|AU030405 AU030405 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E51021_4Z, mRNA sequence
Length = 420
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagac 280
|||||||||||||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 149 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagac 100
>gb|AU096701.1|AU096701 AU096701 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14770, mRNA sequence
Length = 353
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 231 acgaggcggcggcaaatggtgacgccgtcggcgatggcgagctgacagac 280
|||||||||||||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 84 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagac 35
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,017,899
Number of Sequences: 438736
Number of extensions: 1017899
Number of successful extensions: 31059
Number of sequences better than 0.5: 100
Number of HSP's better than 0.5 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29955
Number of HSP's gapped (non-prelim): 1082
length of query: 599
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 578
effective length of database: 2,791,206,460
effective search space: 1613317333880
effective search space used: 1613317333880
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)