BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943819.2.1
(1121 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB653197.1|CB653197 OSJNEc04A04.f OSJNEc Oryza sativa (j... 472 e-130
ref|XM_483665.1| Oryza sativa (japonica cultivar-group), mRNA 472 e-130
dbj|AK066834.1| Oryza sativa (japonica cultivar-group) cDNA... 347 8e-093
dbj|AK099108.1| Oryza sativa (japonica cultivar-group) cDNA... 347 8e-093
dbj|AK104053.1| Oryza sativa (japonica cultivar-group) cDNA... 347 8e-093
ref|XM_475269.1| Oryza sativa (japonica cultivar-group), p... 347 8e-093
gb|AU183276.1|AU183276 AU183276 Rice cDNA from immature lea... 337 8e-090
dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA... 337 8e-090
ref|NM_190827.1| Oryza sativa (japonica cultivar-group), p... 337 8e-090
gb|AF474138.1| Oryza sativa typical P-type R2R3 Myb protein... 323 1e-085
gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone... 323 1e-085
dbj|AP003912.3| Oryza sativa (japonica cultivar-group) geno... 323 1e-085
gb|AACV01000388.1| Oryza sativa (japonica cultivar-group) c... 323 1e-085
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 323 1e-085
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 323 1e-085
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 323 1e-085
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 323 1e-085
dbj|AK063027.1| Oryza sativa (japonica cultivar-group) cDNA... 319 2e-084
gb|C73695.1|C73695 C73695 Rice panicle (longer than 10cm) O... 311 4e-082
gb|AACV01012232.1| Oryza sativa (japonica cultivar-group) c... 260 1e-066
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 260 1e-066
gb|AC130600.3| Oryza sativa (japonica cultivar-group) chrom... 260 1e-066
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 260 1e-066
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 260 1e-066
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 260 1e-066
gb|AU082322.1|AU082322 AU082322 Rice panicle (longer than 1... 258 6e-066
gb|AU082325.1|AU082325 AU082325 Rice panicle (longer than 1... 258 6e-066
gb|AU173093.1|AU173093 AU173093 Rice root Oryza sativa (jap... 258 6e-066
gb|AU184006.1|AU184006 AU184006 Rice root Oryza sativa (jap... 258 6e-066
dbj|AK104408.1| Oryza sativa (japonica cultivar-group) cDNA... 258 6e-066
dbj|AK104457.1| Oryza sativa (japonica cultivar-group) cDNA... 258 6e-066
dbj|AK111966.1| Oryza sativa (japonica cultivar-group) cDNA... 258 6e-066
gb|AU082180.1|AU082180 AU082180 Rice shoot Oryza sativa (ja... 256 2e-065
dbj|AP003922.2| Oryza sativa (japonica cultivar-group) geno... 252 4e-064
gb|AACV01002776.1| Oryza sativa (japonica cultivar-group) c... 252 4e-064
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 252 4e-064
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 252 4e-064
dbj|AP004669.3| Oryza sativa (japonica cultivar-group) geno... 252 4e-064
dbj|AP003297.3| Oryza sativa (japonica cultivar-group) geno... 252 4e-064
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 252 4e-064
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 252 4e-064
gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone... 246 2e-062
gb|AU070855.2|AU070855 AU070855 Rice cDNA from young root O... 230 1e-057
dbj|AP006174.3| Oryza sativa (japonica cultivar-group) geno... 200 1e-048
gb|AACV01020458.1| Oryza sativa (japonica cultivar-group) c... 200 1e-048
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 200 1e-048
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 200 1e-048
dbj|AK111720.1| Oryza sativa (japonica cultivar-group) cDNA... 194 7e-047
dbj|AK111933.1| Oryza sativa (japonica cultivar-group) cDNA... 194 7e-047
ref|XM_467269.1| Oryza sativa (japonica cultivar-group), mRNA 194 7e-047
ref|XM_506902.1| PREDICTED Oryza sativa (japonica cultivar-... 194 7e-047
dbj|AK111960.1| Oryza sativa (japonica cultivar-group) cDNA... 176 2e-041
gb|AACV01005216.1| Oryza sativa (japonica cultivar-group) c... 176 2e-041
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 176 2e-041
dbj|AP004786.3| Oryza sativa (japonica cultivar-group) geno... 176 2e-041
dbj|AP005859.3| Oryza sativa (japonica cultivar-group) geno... 176 2e-041
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 176 2e-041
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 176 2e-041
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 176 2e-041
dbj|AK108259.1| Oryza sativa (japonica cultivar-group) cDNA... 165 6e-038
ref|XM_463409.1| Oryza sativa (japonica cultivar-group), p... 165 6e-038
gb|C73657.1|C73657 C73657 Rice panicle (longer than 10cm) O... 163 3e-037
gb|CF326047.1|CF326047 JMT1--04-P11.g1 AtJMT-overexpressing... 153 2e-034
gb|C73814.1|C73814 C73814 Rice panicle (longer than 10cm) O... 145 6e-032
ref|XM_472825.1| Oryza sativa (japonica cultivar-group), p... 139 4e-030
dbj|AK109011.1| Oryza sativa (japonica cultivar-group) cDNA... 131 9e-028
ref|NM_197015.1| Oryza sativa (japonica cultivar-group) put... 131 9e-028
emb|Y11350.1|OSMYB1084 O.sativa mRNA for myb factor, 1084 bp 131 9e-028
gb|CZ555484.1|CZ555484 M0027756 AS_TRIM_TDNA_B1 Oryza sativ... 129 4e-027
emb|AL513006.1|CNS07EFL Oryza sativa (japonica cultivar-gro... 129 4e-027
emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC O... 129 4e-027
ref|NT_107157.1| Oryza sativa (japonica cultivar-group) 129 4e-027
gb|AACV01010415.1| Oryza sativa (japonica cultivar-group) c... 129 4e-027
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 129 4e-027
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 129 4e-027
emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromoso... 129 4e-027
emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromoso... 129 4e-027
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 129 4e-027
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 129 4e-027
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 129 4e-027
dbj|AK108621.1| Oryza sativa (japonica cultivar-group) cDNA... 127 1e-026
ref|XM_466994.1| Oryza sativa (japonica cultivar-group), mRNA 127 1e-026
ref|XM_478689.1| Oryza sativa (japonica cultivar-group), mRNA 127 1e-026
emb|Y11415.1|OSMYB1355 O.sativa mRNA for myb factor, 1355 bp 127 1e-026
gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNB... 121 9e-025
gb|AACV01021797.1| Oryza sativa (japonica cultivar-group) c... 121 9e-025
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 121 9e-025
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 121 9e-025
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 121 9e-025
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 121 9e-025
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 121 9e-025
gb|AQ364476.2|AQ364476 nbxb0061G19f CUGI Rice BAC Library O... 119 3e-024
gb|AACV01016284.1| Oryza sativa (japonica cultivar-group) c... 115 5e-023
gb|AACV01024070.1| Oryza sativa (japonica cultivar-group) c... 115 5e-023
ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA 115 5e-023
dbj|AP004259.2| Oryza sativa (japonica cultivar-group) geno... 115 5e-023
dbj|AP004006.5| Oryza sativa (japonica cultivar-group) geno... 115 5e-023
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 115 5e-023
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 115 5e-023
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 115 5e-023
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 115 5e-023
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 115 5e-023
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 115 5e-023
dbj|AK072403.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-022
emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC O... 111 8e-022
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 111 8e-022
gb|AACV01025277.1| Oryza sativa (japonica cultivar-group) c... 111 8e-022
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 111 8e-022
gb|AACV01009955.1| Oryza sativa (japonica cultivar-group) c... 103 2e-019
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 103 2e-019
emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromoso... 103 2e-019
dbj|AB111867.1| Oryza sativa (japonica cultivar-group) C ge... 100 3e-018
dbj|AB111868.1| Oryza sativa (japonica cultivar-group) C ge... 100 3e-018
dbj|AB111870.1| Oryza sativa (japonica cultivar-group) C ge... 100 3e-018
dbj|AB111871.1| Oryza sativa (japonica cultivar-group) C ge... 100 3e-018
gb|AF474140.1| Oryza sativa typical P-type R2R3 Myb protein... 98 1e-017
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 98 1e-017
dbj|AK112056.1| Oryza sativa (japonica cultivar-group) cDNA... 98 1e-017
gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone... 98 1e-017
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 98 1e-017
gb|AACV01002155.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
gb|AACV01016563.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
ref|XM_466825.1| Oryza sativa (japonica cultivar-group), mRNA 98 1e-017
dbj|AP005195.3| Oryza sativa (japonica cultivar-group) geno... 98 1e-017
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 98 1e-017
gb|D47363.1|D47363 RICS12691A Rice green shoot Oryza sativa... 96 5e-017
dbj|AK111782.1| Oryza sativa (japonica cultivar-group) cDNA... 96 5e-017
gb|AACV01002173.1| Oryza sativa (japonica cultivar-group) c... 96 5e-017
gb|AACV01010414.1| Oryza sativa (japonica cultivar-group) c... 96 5e-017
gb|AACV01024071.1| Oryza sativa (japonica cultivar-group) c... 96 5e-017
ref|NM_192221.1| Oryza sativa (japonica cultivar-group), p... 96 5e-017
dbj|AP003245.4| Oryza sativa (japonica cultivar-group) geno... 96 5e-017
gb|C72644.1|C72644 C72644 Rice panicle at flowering stage O... 94 2e-016
gb|BP432988.1|BP432988 BP432988 Oryza sativa (japonica cult... 94 2e-016
gb|AY323484.1| Oryza sativa (japonica cultivar-group) myb-r... 94 2e-016
dbj|AK111798.1| Oryza sativa (japonica cultivar-group) cDNA... 94 2e-016
gb|AC118285.2| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|AC098833.2| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|AACV01010119.1| Oryza sativa (japonica cultivar-group) c... 94 2e-016
gb|AACV01012646.1| Oryza sativa (japonica cultivar-group) c... 94 2e-016
ref|XM_473184.1| Oryza sativa (japonica cultivar-group), p... 94 2e-016
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 94 2e-016
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 94 2e-016
emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromoso... 94 2e-016
emb|Y11414.1|OSMYB1202 O.sativa mRNA for myb factor, 1202 bp 94 2e-016
gb|AQ914539.1|AQ914539 nbeb0049K13r CUGI Rice BAC Library (... 92 8e-016
gb|AU082166.1|AU082166 AU082166 Rice cDNA from young root O... 92 8e-016
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 92 8e-016
dbj|AP002871.2| Oryza sativa (japonica cultivar-group) geno... 92 8e-016
dbj|AP002873.2| Oryza sativa (japonica cultivar-group) geno... 92 8e-016
gb|AACV01000840.1| Oryza sativa (japonica cultivar-group) c... 92 8e-016
gb|AACV01022477.1| Oryza sativa (japonica cultivar-group) c... 92 8e-016
ref|NM_189302.1| Oryza sativa (japonica cultivar-group), p... 92 8e-016
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 92 8e-016
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 92 8e-016
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 92 8e-016
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 92 8e-016
gb|AC135794.3| Oryza sativa (japonica cultivar-group) chrom... 92 8e-016
gb|AC134044.4| Oryza sativa (japonica cultivar-group) chrom... 92 8e-016
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 92 8e-016
gb|AU082155.1|AU082155 AU082155 Rice root Oryza sativa (jap... 90 3e-015
emb|X96750.1|OSMYB71 O.sativa myb7 gene, clone myb71 90 3e-015
dbj|AP004788.1| Oryza sativa (japonica cultivar-group) chro... 90 3e-015
gb|AF474134.1| Oryza sativa typical P-type R2R3 Myb protein... 90 3e-015
gb|AY459342.1| Oryza sativa (japonica cultivar-group) clone... 90 3e-015
emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC O... 90 3e-015
dbj|AP004133.3| Oryza sativa (japonica cultivar-group) geno... 90 3e-015
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 90 3e-015
gb|AACV01005009.1| Oryza sativa (japonica cultivar-group) c... 90 3e-015
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 90 3e-015
gb|AACV01025049.1| Oryza sativa (japonica cultivar-group) c... 90 3e-015
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 90 3e-015
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 90 3e-015
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 90 3e-015
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 90 3e-015
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 90 3e-015
emb|X96749.1|OSMYB72 O.sativa myb7 gene, clone myb72 90 3e-015
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 90 3e-015
gb|CA758808.1|CA758808 BR030025000_PLATE_F07_54_061.ab1 OA ... 88 1e-014
gb|CB679300.1|CB679300 OSJNEf02K08.f OSJNEf Oryza sativa (j... 86 5e-014
ref|XM_470673.1| Oryza sativa (japonica cultivar-group), mRNA 86 5e-014
dbj|AP005686.3| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
dbj|AP005747.3| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
gb|AACV01009638.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
gb|AACV01020037.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
ref|NT_079859.2| Oryza sativa (japonica cultivar-group) 84 2e-013
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 84 2e-013
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 84 2e-013
emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromoso... 84 2e-013
dbj|AP002912.2| Oryza sativa (japonica cultivar-group) geno... 82 7e-013
gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone... 82 7e-013
gb|AACV01000257.1| Oryza sativa (japonica cultivar-group) c... 82 7e-013
dbj|AP003339.4| Oryza sativa (japonica cultivar-group) geno... 82 7e-013
ref|XM_462805.1| Oryza sativa (japonica cultivar-group), mRNA 82 7e-013
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 82 7e-013
gb|AU081563.1|AU081563 AU081563 Rice panicle shorter than 3... 80 3e-012
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 80 3e-012
gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein... 80 3e-012
dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA... 80 3e-012
gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbar... 80 3e-012
dbj|AP005652.3| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
dbj|AP005527.3| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
dbj|AP005619.3| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
gb|AACV01006437.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
gb|AACV01013245.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
gb|AACV01013461.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
ref|XM_473295.1| Oryza sativa (japonica cultivar-group), p... 80 3e-012
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 80 3e-012
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 80 3e-012
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 80 3e-012
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|D47255.1|D47255 RICS12518A Rice green shoot Oryza sativa... 78 1e-011
gb|AACV01003526.1| Oryza sativa (japonica cultivar-group) c... 78 1e-011
ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA 78 1e-011
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 78 1e-011
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 78 1e-011
dbj|AP005849.3| Oryza sativa (japonica cultivar-group) geno... 78 1e-011
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
emb|X89605.1|OSMYB7 O.sativa mRNA for myb 7 protein 78 1e-011
gb|C72014.1|C72014 C72014 Rice panicle at flowering stage O... 76 5e-011
gb|CA756492.1|CA756492 BR030043000_PLATE_G05_39_038.ab1 OA ... 76 5e-011
gb|CB682826.1|CB682826 OSJNEf10I12.f OSJNEf Oryza sativa (j... 76 5e-011
emb|AL607104.1|OSJN01012 Oryza sativa (japonica cultivar-gr... 76 5e-011
gb|AC090973.1|AC090973 Oryza sativa (japonica cultivar-grou... 76 5e-011
gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein... 76 5e-011
dbj|AK109125.1| Oryza sativa (japonica cultivar-group) cDNA... 76 5e-011
dbj|AK119340.1| Oryza sativa (japonica cultivar-group) cDNA... 76 5e-011
gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 ... 76 5e-011
dbj|AP004057.3| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 ... 76 5e-011
gb|AACV01000343.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
gb|AACV01005549.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
gb|AACV01006536.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
gb|AACV01010181.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
ref|XM_468166.1| Oryza sativa (japonica cultivar-group), mRNA 76 5e-011
ref|XM_468625.1| Oryza sativa (japonica cultivar-group), mRNA 76 5e-011
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 76 5e-011
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 76 5e-011
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 76 5e-011
dbj|AP002743.1| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
dbj|AP002746.2| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
ref|NM_189671.1| Oryza sativa (japonica cultivar-group), p... 76 5e-011
emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromoso... 76 5e-011
gb|AQ274382.1|AQ274382 nbxb0035E14r CUGI Rice BAC Library O... 74 2e-010
gb|AQ274388.1|AQ274388 nbxb0035G02r CUGI Rice BAC Library O... 74 2e-010
gb|AQ509390.1|AQ509390 nbxb0096O15r CUGI Rice BAC Library O... 74 2e-010
gb|CB676151.1|CB676151 OSJNEe12E03.f OSJNEe Oryza sativa (j... 74 2e-010
gb|BP184885.1|BP184885 BP184885 pNS rice callus cDNA Oryza ... 74 2e-010
gb|AY026332.1| Oryza sativa Myb transcription factor JAMyb ... 74 2e-010
dbj|AP004567.1| Oryza sativa (japonica cultivar-group) chro... 74 2e-010
dbj|AK060276.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AK069082.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AK106039.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AK111740.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AK121023.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AP006265.2| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
dbj|AP004704.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AC135190.2| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|AACV01018553.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|AACV01018749.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|AACV01018966.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|AACV01020446.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|AACV01023759.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
ref|XM_470783.1| Oryza sativa (japonica cultivar-group), mRNA 74 2e-010
ref|XM_472336.1| Oryza sativa (japonica cultivar-group), p... 74 2e-010
ref|XM_482584.1| Oryza sativa (japonica cultivar-group), mRNA 74 2e-010
ref|XM_483654.1| Oryza sativa (japonica cultivar-group), mRNA 74 2e-010
ref|XM_483655.1| Oryza sativa (japonica cultivar-group), mRNA 74 2e-010
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
dbj|AP005092.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
dbj|AP004376.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|AQ842943.1|AQ842943 nbxb0001G19r CUGI Rice BAC Library O... 72 7e-010
gb|C74379.1|C74379 C74379 Rice panicle shorter than 3cm Ory... 72 7e-010
dbj|AK064679.1| Oryza sativa (japonica cultivar-group) cDNA... 72 7e-010
dbj|AK111697.1| Oryza sativa (japonica cultivar-group) cDNA... 72 7e-010
gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone... 72 7e-010
gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 ... 72 7e-010
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 72 7e-010
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
gb|AACV01006769.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
gb|AACV01007164.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
gb|AACV01014797.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
gb|AACV01019923.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
ref|XM_472754.1| Oryza sativa (japonica cultivar-group), p... 72 7e-010
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 72 7e-010
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 72 7e-010
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 72 7e-010
emb|Y11351.1|OSMYB1402 O.sativa mRNA for myb factor, 1402 bp 72 7e-010
dbj|AK108709.1| Oryza sativa (japonica cultivar-group) cDNA... 70 3e-009
gb|AC122149.2| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbar... 70 3e-009
dbj|AP005319.3| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
gb|AACV01005346.1| Oryza sativa (japonica cultivar-group) c... 70 3e-009
gb|AACV01005857.1| Oryza sativa (japonica cultivar-group) c... 70 3e-009
ref|XM_467636.1| Oryza sativa (japonica cultivar-group), mRNA 70 3e-009
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 70 3e-009
gb|AU062529.1|AU062529 AU062529 Rice callus Oryza sativa (j... 68 1e-008
gb|CB656158.1|CB656158 OSJNEc10C21.f OSJNEc Oryza sativa (j... 68 1e-008
gb|AF474137.1| Oryza sativa typical P-type R2R3 Myb protein... 68 1e-008
dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chro... 68 1e-008
dbj|AP004768.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
dbj|AP005636.2| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|AACV01019979.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
ref|XM_466990.1| Oryza sativa (japonica cultivar-group), mRNA 68 1e-008
gb|AQ325721.1|AQ325721 nbxb0020A23f CUGI Rice BAC Library O... 66 4e-008
gb|CB647689.1|CB647689 OSJNEb10L13.f OSJNEb Oryza sativa (j... 66 4e-008
gb|CB648823.1|CB648823 OSJNEb12G15.f OSJNEb Oryza sativa (j... 66 4e-008
gb|CB660335.1|CB660335 OSJNEd01P11.f OSJNEd Oryza sativa (j... 66 4e-008
gb|CB661304.1|CB661304 OSJNEd03P13.f OSJNEd Oryza sativa (j... 66 4e-008
gb|CB674878.1|CB674878 OSJNEe10C23.f OSJNEe Oryza sativa (j... 66 4e-008
dbj|AK099223.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
dbj|AK107424.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
dbj|AK111634.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
dbj|AP004090.3| Oryza sativa (japonica cultivar-group) geno... 66 4e-008
gb|AC108504.2| Oryza sativa (japonica cultivar-group) chrom... 66 4e-008
dbj|AP002860.1| Oryza sativa (japonica cultivar-group) geno... 66 4e-008
gb|AACV01000122.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
gb|AACV01003205.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
gb|AACV01004769.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
gb|AACV01009913.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
gb|AACV01010768.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
ref|XM_462803.1| Oryza sativa (japonica cultivar-group), p... 66 4e-008
ref|XM_463865.1| Oryza sativa (japonica cultivar-group), mRNA 66 4e-008
ref|XM_475091.1| Oryza sativa (japonica cultivar-group), p... 66 4e-008
dbj|AP004867.2| Oryza sativa (japonica cultivar-group) geno... 66 4e-008
ref|NM_184207.2| Oryza sativa (japonica cultivar-group), mRNA 66 4e-008
ref|XM_550262.1| Oryza sativa (japonica cultivar-group), mRNA 66 4e-008
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 66 4e-008
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 66 4e-008
gb|AC093921.2| Oryza sativa (japonica cultivar-group) chrom... 66 4e-008
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 66 4e-008
gb|AQ579141.1|AQ579141 nbxb0096I15f CUGI Rice BAC Library O... 64 2e-007
gb|CB680889.1|CB680889 OSJNEf06G13.f OSJNEf Oryza sativa (j... 64 2e-007
gb|CB680890.1|CB680890 OSJNEf06G13.r OSJNEf Oryza sativa (j... 64 2e-007
dbj|AK109620.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
gb|AY459337.1| Oryza sativa (japonica cultivar-group) clone... 64 2e-007
gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 ... 64 2e-007
gb|AC118288.2| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|AACV01000813.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01002252.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01010086.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01010825.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
ref|NM_183669.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
ref|NM_191815.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
ref|XM_473120.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 64 2e-007
dbj|AP003140.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
dbj|AP003292.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
dbj|AP002883.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
dbj|AP003229.3| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromoso... 64 2e-007
gb|AY873246.1|AY873246 04ET3_013_I_007_019_029C07 Oryza sat... 62 7e-007
gb|CV720744.1|CV720744 YBH--01-L04.b1 Rice before heading y... 62 7e-007
gb|BP184381.1|BP184381 BP184381 pNS rice panicle cDNA, germ... 62 7e-007
dbj|AK112018.1| Oryza sativa (japonica cultivar-group) cDNA... 62 7e-007
dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA... 62 7e-007
gb|AC134230.2| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbar... 62 7e-007
gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 ... 62 7e-007
gb|AACV01000256.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
gb|AACV01002207.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
gb|AACV01006480.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
gb|AACV01008001.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
ref|NM_191687.1| Oryza sativa (japonica cultivar-group), p... 62 7e-007
ref|XM_473818.1| Oryza sativa (japonica cultivar-group), p... 62 7e-007
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 62 7e-007
dbj|AP002901.2| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CG408359.1|CG408359 Ds49 Ds insertion lines Oryza sativa... 60 3e-006
gb|D24724.1|D24724 RICR2443A Rice root Oryza sativa (japoni... 60 3e-006
gb|CB658779.1|CB658779 OSJNEc15B08.f OSJNEc Oryza sativa (j... 60 3e-006
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 60 3e-006
dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK099283.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK111807.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC O... 60 3e-006
gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone... 60 3e-006
gb|AC123525.2| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP004083.2| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP003980.3| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 60 3e-006
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|AC120990.3| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AC120986.2| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AACV01004921.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01005439.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01012726.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01018505.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01022281.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01023895.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01025048.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|XM_466772.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|XM_467854.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|XM_482497.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|NT_107221.1| Oryza sativa (japonica cultivar-group) 60 3e-006
ref|XM_506868.1| PREDICTED Oryza sativa (japonica cultivar-... 60 3e-006
emb|Y11352.1|OSMYB1308 O.sativa mRNA for myb factor, 1308 bp 60 3e-006
gb|C74144.1|C74144 C74144 Rice panicle shorter than 3cm Ory... 58 1e-005
gb|C74411.2|C74411 C74411 Rice panicle shorter than 3cm Ory... 58 1e-005
gb|CA753778.1|CA753778 BR040002000_PLATE_B03_18_027.ab1 OA ... 58 1e-005
gb|CB669882.1|CB669882 OSJNEe02K23.r OSJNEe Oryza sativa (j... 58 1e-005
gb|CB676187.1|CB676187 OSJNEe12E23.f OSJNEe Oryza sativa (j... 58 1e-005
gb|CV152463.1|CV152463 LS331-S.SEQ Cold stressed rice cDNA ... 58 1e-005
dbj|AK066025.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK072361.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK101674.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
gb|AY323480.1| Oryza sativa (japonica cultivar-group) putat... 58 1e-005
emb|BX000500.4|CNS08CDQ Oryza sativa chromosome 12, . BAC O... 58 1e-005
dbj|AP003849.2| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP005465.5| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|AACV01001493.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01010449.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01016207.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01016837.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01023863.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|NM_191816.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NM_193333.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|XM_472292.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|XM_479227.1| Oryza sativa (japonica cultivar-group), mRNA 58 1e-005
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 58 1e-005
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 58 1e-005
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 58 1e-005
dbj|AP004260.2| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP004306.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP004231.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP004232.4| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromoso... 58 1e-005
emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromoso... 58 1e-005
emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromoso... 58 1e-005
gb|AU082324.1|AU082324 AU082324 Rice panicle (longer than 1... 56 4e-005
gb|AU062424.2|AU062424 AU062424 Rice callus Oryza sativa (j... 56 4e-005
gb|CB639367.1|CB639367 OSJNEa10D24.f OSJNEa Oryza sativa (j... 56 4e-005
gb|CB649345.1|CB649345 OSJNEb13D15.f OSJNEb Oryza sativa (j... 56 4e-005
dbj|AK110683.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
dbj|AK111808.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
dbj|AK112117.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone... 56 4e-005
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
gb|AACV01002127.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
gb|AACV01017273.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
ref|NM_192085.1| Oryza sativa (japonica cultivar-group), p... 56 4e-005
ref|NM_192243.1| Oryza sativa (japonica cultivar-group), p... 56 4e-005
ref|XM_468624.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
ref|XM_480122.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
dbj|AP003347.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
gb|AQ051267.1|AQ051267 nbxb0001cF08f CUGI Rice BAC Library ... 54 2e-004
gb|CB643957.1|CB643957 OSJNEb04P04.f OSJNEb Oryza sativa (j... 54 2e-004
dbj|AK103806.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AP004256.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01016862.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01018141.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|NM_193128.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_481693.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
dbj|AP004334.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP003752.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP005925.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AQ160956.1|AQ160956 nbxb0006A18r CUGI Rice BAC Library O... 52 7e-004
gb|CB653198.1|CB653198 OSJNEc04A04.r OSJNEc Oryza sativa (j... 52 7e-004
gb|CB665378.1|CB665378 OSJNEd11L19.f OSJNEd Oryza sativa (j... 52 7e-004
gb|CB665379.1|CB665379 OSJNEd11L19.r OSJNEd Oryza sativa (j... 52 7e-004
gb|CB665403.1|CB665403 OSJNEd11M19.r OSJNEd Oryza sativa (j... 52 7e-004
gb|CV728451.1|CV728451 COLD--01-H09.b1 Cold treated rice le... 52 7e-004
dbj|AK108452.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
dbj|AK109860.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
dbj|AK111788.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC O... 52 7e-004
emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC O... 52 7e-004
gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbar... 52 7e-004
dbj|AP005657.3| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|AC093956.2| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
dbj|AP004562.3| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
ref|NT_107154.1| Oryza sativa (japonica cultivar-group) 52 7e-004
gb|AACV01006413.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
gb|AACV01012680.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
>gb|CB653197.1|CB653197 OSJNEc04A04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04A04 5', mRNA sequence
Length = 610
Score = 472 bits (238), Expect = e-130
Identities = 346/382 (90%)
Strand = Plus / Minus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 415 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 356
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 355 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 296
Query: 860 cttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagtt 919
|||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 295 cttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagtt 236
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||||||||| || || |||||||||||||||||
Sbjct: 235 gccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgca 176
Query: 980 ccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggat 1039
|| || ||||| || |||||||| ||||| |||||||| || |||||||| ||||||||
Sbjct: 175 gcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcggat 116
Query: 1040 gtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcctt 1099
|||||| || ||||||||||||||||||||||||||||||||| |||| |||||| ||||
Sbjct: 115 gtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcctt 56
Query: 1100 ctcgcagcagggcgaccgcccc 1121
||||||||| ||||||| ||||
Sbjct: 55 ctcgcagcacggcgacctcccc 34
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 545 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 493
>ref|XM_483665.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 732
Score = 472 bits (238), Expect = e-130
Identities = 346/382 (90%)
Strand = Plus / Minus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 384 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 325
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 324 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 265
Query: 860 cttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagtt 919
|||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 cttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagtt 205
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||||||||| || || |||||||||||||||||
Sbjct: 204 gccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgca 145
Query: 980 ccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggat 1039
|| || ||||| || |||||||| ||||| |||||||| || |||||||| ||||||||
Sbjct: 144 gcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcggat 85
Query: 1040 gtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcctt 1099
|||||| || ||||||||||||||||||||||||||||||||| |||| |||||| ||||
Sbjct: 84 gtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcctt 25
Query: 1100 ctcgcagcagggcgaccgcccc 1121
||||||||| ||||||| ||||
Sbjct: 24 ctcgcagcacggcgacctcccc 3
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 514 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 462
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 631 ccttctggaggccgaggctgcagccgaagcagag 598
>dbj|AK066834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013083O13, full
insert sequence
Length = 1069
Score = 347 bits (175), Expect = 8e-093
Identities = 292/331 (88%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 471 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 412
Query: 851 gagcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggc 910
|| ||||||||||| |||||||||||||| || || |||||| |||||||||||| |
Sbjct: 411 cagagaccacttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtc 352
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||||||
Sbjct: 351 ggtgaagttgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagct 292
Query: 971 cttgccgcaccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtg 1030
||||||||| || || ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 291 cttgccgcagcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatg 232
Query: 1031 cgcgcggatgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggt 1090
||| | |||||| || | || |||| |||||||||||| |||||||| ||| |||| ||
Sbjct: 231 cgccctgatgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgt 172
Query: 1091 gtgcgccttctcgcagcagggcgaccgcccc 1121
|||||||||||||||||| ||||||| ||||
Sbjct: 171 gtgcgccttctcgcagcacggcgacctcccc 141
>dbj|AK099108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030O22, full
insert sequence
Length = 1023
Score = 347 bits (175), Expect = 8e-093
Identities = 292/331 (88%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 475 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 416
Query: 851 gagcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggc 910
|| ||||||||||| |||||||||||||| || || |||||| |||||||||||| |
Sbjct: 415 cagagaccacttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtc 356
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||||||
Sbjct: 355 ggtgaagttgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagct 296
Query: 971 cttgccgcaccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtg 1030
||||||||| || || ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 295 cttgccgcagcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatg 236
Query: 1031 cgcgcggatgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggt 1090
||| | |||||| || | || |||| |||||||||||| |||||||| ||| |||| ||
Sbjct: 235 cgccctgatgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgt 176
Query: 1091 gtgcgccttctcgcagcagggcgaccgcccc 1121
|||||||||||||||||| ||||||| ||||
Sbjct: 175 gtgcgccttctcgcagcacggcgacctcccc 145
>dbj|AK104053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-G03, full
insert sequence
Length = 1042
Score = 347 bits (175), Expect = 8e-093
Identities = 292/331 (88%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 466 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 407
Query: 851 gagcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggc 910
|| ||||||||||| |||||||||||||| || || |||||| |||||||||||| |
Sbjct: 406 cagagaccacttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtc 347
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||||||
Sbjct: 346 ggtgaagttgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagct 287
Query: 971 cttgccgcaccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtg 1030
||||||||| || || ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 286 cttgccgcagcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatg 227
Query: 1031 cgcgcggatgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggt 1090
||| | |||||| || | || |||| |||||||||||| |||||||| ||| |||| ||
Sbjct: 226 cgccctgatgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgt 167
Query: 1091 gtgcgccttctcgcagcagggcgaccgcccc 1121
|||||||||||||||||| ||||||| ||||
Sbjct: 166 gtgcgccttctcgcagcacggcgacctcccc 136
>ref|XM_475269.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 347 bits (175), Expect = 8e-093
Identities = 292/331 (88%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 333 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 274
Query: 851 gagcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggc 910
|| ||||||||||| |||||||||||||| || || |||||| |||||||||||| |
Sbjct: 273 cagagaccacttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtc 214
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||||||
Sbjct: 213 ggtgaagttgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagct 154
Query: 971 cttgccgcaccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtg 1030
||||||||| || || ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 153 cttgccgcagcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatg 94
Query: 1031 cgcgcggatgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggt 1090
||| | |||||| || | || |||| |||||||||||| |||||||| ||| |||| ||
Sbjct: 93 cgccctgatgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgt 34
Query: 1091 gtgcgccttctcgcagcagggcgaccgcccc 1121
|||||||||||||||||| ||||||| ||||
Sbjct: 33 gtgcgccttctcgcagcacggcgacctcccc 3
>gb|AU183276.1|AU183276 AU183276 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60862, mRNA sequence
Length = 451
Score = 337 bits (170), Expect = 8e-090
Identities = 317/366 (86%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 438 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 379
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||||| |||||| ||| || | || || | |||||||||||| ||||| |||
Sbjct: 378 tcgttgtccgtcctccccggcagctgccccgcaatcaacgaccacttgttgccgagaagg 319
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||| ||||||| |||||| ||||| |||||| ||||||||||||||||||| ||||||
Sbjct: 318 gcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagttgccgcgcttgaggtcg 259
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
|| ||||||||||| ||||| || || ||||||||||||||||| || || || ||||||
Sbjct: 258 gggcggaggtagttcatccagcggaggcggcagctcttgccgcagcggaggagccccgcc 199
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
||||||||||||||||||||||| || ||||||||||| ||||||||| | ||| |||
Sbjct: 198 gccttgggcagcgaccgccagcaaccctcgccgtgcgccttgatgtaggcgatcagccgc 139
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
| |||||||||||| |||||||| ||| |||| |||||||||||||||||||| ||||||
Sbjct: 138 tggtcctcctccttcgtccacgcccccttgttcgtgtgcgccttctcgcagcatggcgac 79
Query: 1116 cgcccc 1121
| ||||
Sbjct: 78 ctcccc 73
>dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F12, full
insert sequence
Length = 1037
Score = 337 bits (170), Expect = 8e-090
Identities = 317/366 (86%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 464 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 405
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||||| |||||| ||| || | || || | |||||||||||| ||||| |||
Sbjct: 404 tcgttgtccgtcctccccggcagctgccccgcaatcaacgaccacttgttgccgagaagg 345
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||| ||||||| |||||| ||||| |||||| ||||||||||||||||||| ||||||
Sbjct: 344 gcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagttgccgcgcttgaggtcg 285
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
|| ||||||||||| ||||| || || ||||||||||||||||| || || || ||||||
Sbjct: 284 gggcggaggtagttcatccagcggaggcggcagctcttgccgcagcggaggagccccgcc 225
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
||||||||||||||||||||||| || ||||||||||| ||||||||| | ||| |||
Sbjct: 224 gccttgggcagcgaccgccagcaaccctcgccgtgcgccttgatgtaggcgatcagccgc 165
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
| |||||||||||| |||||||| ||| |||| |||||||||||||||||||| ||||||
Sbjct: 164 tggtcctcctccttcgtccacgcccccttgttcgtgtgcgccttctcgcagcatggcgac 105
Query: 1116 cgcccc 1121
| ||||
Sbjct: 104 ctcccc 99
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 726 gaggtcgaggttgaggtcggggca 703
>ref|NM_190827.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 864
Score = 337 bits (170), Expect = 8e-090
Identities = 317/366 (86%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 368 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 309
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||||| |||||| ||| || | || || | |||||||||||| ||||| |||
Sbjct: 308 tcgttgtccgtcctccccggcagctgccccgcaatcaacgaccacttgttgccgagaagg 249
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||| ||||||| |||||| ||||| |||||| ||||||||||||||||||| ||||||
Sbjct: 248 gcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagttgccgcgcttgaggtcg 189
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
|| ||||||||||| ||||| || || ||||||||||||||||| || || || ||||||
Sbjct: 188 gggcggaggtagttcatccagcggaggcggcagctcttgccgcagcggaggagccccgcc 129
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
||||||||||||||||||||||| || ||||||||||| ||||||||| | ||| |||
Sbjct: 128 gccttgggcagcgaccgccagcaaccctcgccgtgcgccttgatgtaggcgatcagccgc 69
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
| |||||||||||| |||||||| ||| |||| |||||||||||||||||||| ||||||
Sbjct: 68 tggtcctcctccttcgtccacgcccccttgttcgtgtgcgccttctcgcagcatggcgac 9
Query: 1116 cgcccc 1121
| ||||
Sbjct: 8 ctcccc 3
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 630 gaggtcgaggttgaggtcggggca 607
>gb|AF474138.1| Oryza sativa typical P-type R2R3 Myb protein gene, partial cds
Length = 1252
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 498 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 557
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 558 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 617
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 618 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 677
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 678 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 737
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 738 tctcgcagcacggcgacctcccc 760
Score = 153 bits (77), Expect = 2e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 303 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 362
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 363 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 422
Query: 860 c 860
|
Sbjct: 423 c 423
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 173 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 225
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 56 ccttctggaggccgaggctgcagccgaagcagag 89
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene
region
Length = 65993
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 46664 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 46723
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 46724 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 46783
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 46784 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 46843
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 46844 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 46903
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 46904 tctcgcagcacggcgacctcccc 46926
Score = 149 bits (75), Expect = 4e-033
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
||||| |||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 46469 ggggcsgtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 46528
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 46529 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 46588
Query: 860 c 860
|
Sbjct: 46589 c 46589
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 46339 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 46391
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 46222 ccttctggaggccgaggctgcagccgaagcagag 46255
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1479_B11
Length = 105702
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 23914 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 23973
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 23974 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 24033
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 24034 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 24093
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 24094 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 24153
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 24154 tctcgcagcacggcgacctcccc 24176
Score = 153 bits (77), Expect = 2e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 23719 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 23778
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 23779 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 23838
Query: 860 c 860
|
Sbjct: 23839 c 23839
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 23589 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 23641
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 23472 ccttctggaggccgaggctgcagccgaagcagag 23505
>gb|AACV01000388.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000388, whole
genome shotgun sequence
Length = 55240
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 46129 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 46188
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 46189 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 46248
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 46249 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 46308
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 46309 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 46368
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 46369 tctcgcagcacggcgacctcccc 46391
Score = 153 bits (77), Expect = 2e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 45934 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 45993
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 45994 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 46053
Query: 860 c 860
|
Sbjct: 46054 c 46054
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 45804 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 45856
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 45687 ccttctggaggccgaggctgcagccgaagcagag 45720
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 27303537 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 27303596
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 27303597 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 27303656
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 27303657 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 27303716
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 27303717 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 27303776
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 27303777 tctcgcagcacggcgacctcccc 27303799
Score = 153 bits (77), Expect = 2e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 27303342 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 27303401
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 27303402 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 27303461
Query: 860 c 860
|
Sbjct: 27303462 c 27303462
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 27303212 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 27303264
Score = 73.8 bits (37), Expect = 2e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 900 tcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgc 959
|||||||| ||||||| | ||| ||||| ||||| || ||||| |||||| ||||||||
Sbjct: 27243577 tcctcgtctgcggtgaggaggccacgcttgaggtcagggcggagatagttggtccaccgc 27243636
Query: 960 agccggcagctcttgccgcaccgcagcag 988
| ||||||||||||||| || ||||||||
Sbjct: 27243637 aaccggcagctcttgccacagcgcagcag 27243665
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgg 835
||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 23807120 gtgcgtgttccagaagttcttgatctcgttgtccgtcctccccgg 23807164
Score = 73.8 bits (37), Expect = 2e-010
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgca 984
||||||||||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 20995774 ggccggaggtagttggtccaccggagccggcagctcttgctgcaccgca 20995726
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||| |||||||||||||
Sbjct: 20996079 gtgcgtgttccagtagttcttgatgtcgttgtccgtcc 20996042
Score = 60.0 bits (30), Expect = 3e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||| |||||||||||||||||||||||
Sbjct: 20355866 gtgttccagtggttcttgatctcgttgtccgtcc 20355833
Score = 56.0 bits (28), Expect = 4e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 942 aggtagttgatccaccgcagccggcagctctt 973
||||||||||||||||| ||||||||||||||
Sbjct: 2711993 aggtagttgatccaccggagccggcagctctt 2712024
Score = 56.0 bits (28), Expect = 4e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 798 ttccagtagttcttgatctcgttgtccgtccg 829
|||||||||||||||||||||||||| |||||
Sbjct: 2710920 ttccagtagttcttgatctcgttgtcggtccg 2710951
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
|||||||||||||| ||||||| |||| ||||||||| ||||||||
Sbjct: 20355621 ggccggaggtagttcgtccaccgtagcctgcagctcttcccgcaccg 20355575
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 660 gcttctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||||||
Sbjct: 14520841 gcttctgctgctgctgcggcggcggcg 14520815
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 27303095 ccttctggaggccgaggctgcagccgaagcagag 27303128
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||| |||||||||||||
Sbjct: 8831015 gtgttccagtagttcttgacatcgttgtccgtcc 8830982
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 661 cttctgctgctgctgcggcggcggcg 686
||||||||||||||||||||||||||
Sbjct: 617447 cttctgctgctgctgcggcggcggcg 617472
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtc 823
|||||||||||| | ||||||||||||||||||
Sbjct: 27241832 gtgcgtgttccaatggttcttgatctcgttgtc 27241864
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 942 aggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||||| |||||||||||| |||||||||||| ||||
Sbjct: 23807374 aggtagttcgtccaccgcagcctgcagctcttgccacacc 23807413
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 494 gccgtggccgtggccgcggccgcc 517
||||||||||||||||||||||||
Sbjct: 1766571 gccgtggccgtggccgcggccgcc 1766594
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 492 ccgccgtggccgtggccgcggc 513
||||||||||||||||||||||
Sbjct: 19366354 ccgccgtggccgtggccgcggc 19366333
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 5672455 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 5672514
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 5672515 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 5672574
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 5672575 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 5672634
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 5672635 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 5672694
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 5672695 tctcgcagcacggcgacctcccc 5672717
Score = 153 bits (77), Expect = 2e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 5672260 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 5672319
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 5672320 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 5672379
Query: 860 c 860
|
Sbjct: 5672380 c 5672380
Score = 91.7 bits (46), Expect = 8e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 930 aggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcagg 989
||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 11493241 aggtcggcccggaggtagttgatccaccgaagcctgcagctcttgccgcagcgcagcagg 11493182
Query: 990 cc 991
||
Sbjct: 11493181 cc 11493180
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3594963 gccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgca 3594904
Query: 980 ccgcagcag 988
||| ||||
Sbjct: 3594903 gcgctgcag 3594895
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 932 gtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 4924098 gtcggggcggaggtagttgagccaccgcagcctgcagctcttgccgcacc 4924147
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 5672130 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 5672182
Score = 67.9 bits (34), Expect = 1e-008
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccc 832
||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 11498440 gtgcgagttccagtagttcttgatctcattgtccgtccgccc 11498399
Score = 65.9 bits (33), Expect = 4e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||||||||||||||||||||||||| ||||||
Sbjct: 1573876 tccagtagttcttgatctcgttgtccgtcctccccgg 1573912
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgg 835
||||||||||||||||||||||||||||| ||||||
Sbjct: 11127287 ccagtagttcttgatctcgttgtccgtcctccccgg 11127252
Score = 61.9 bits (31), Expect = 7e-007
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 798 ttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||||||||||
Sbjct: 3582455 ttccagtagttcttgatctcgttgtccgtcc 3582485
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 797 gttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
||||||| ||||||||||||||||||||| || |||||| |||| ||| |||||
Sbjct: 3595194 gttccagaagttcttgatctcgttgtccgacctccccggcagcctcgccgcgat 3595141
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||| |||||| || |||||| ||||||||||||| |||||| || ||||||||
Sbjct: 11127176 ggtgaagtcgccgcggcgcacgtcggggcggaggtagttgagccaccggaggcggcagct 11127117
Query: 971 ctt 973
|||
Sbjct: 11127116 ctt 11127114
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||| ||||||| ||||| ||||||||||||
Sbjct: 3582793 cttcaggtcaggcctcaggtagttcatccacctcagcctgcagctcttgcc 3582843
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 5672013 ccttctggaggccgaggctgcagccgaagcagag 5672046
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 7057069 ctgctgctgctgcggcggcggcg 7057047
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 4640696 ctgctgctgctgcggcggcggcg 4640674
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 766939 ctgctgctgctgcggcggcggcg 766917
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||| |||||||| |||||||||||||
Sbjct: 4923885 gtgttccagtggttcttgacgtcgttgtccgtcc 4923918
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 658 cggcttctgctgctgctgcggcggcggcgc 687
||||| |||||||||| |||||||||||||
Sbjct: 4640699 cggctgctgctgctgcggcggcggcggcgc 4640670
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 5672455 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 5672514
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 5672515 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 5672574
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 5672575 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 5672634
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 5672635 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 5672694
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 5672695 tctcgcagcacggcgacctcccc 5672717
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 37385019 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 37384960
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 37384959 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 37384900
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 37384899 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 37384840
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 37384839 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 37384780
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 37384779 tctcgcagcatggcgacctcccc 37384757
Score = 153 bits (77), Expect = 2e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 5672260 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 5672319
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 5672320 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 5672379
Query: 860 c 860
|
Sbjct: 5672380 c 5672380
Score = 97.6 bits (49), Expect = 1e-017
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 890 gatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagtt 949
||||||||| ||||||||| ||| || | || |||||| | |||||| |||||||||||
Sbjct: 28459426 gatgaggtcctcctcgtcgtcggcgatggggcagcgcttgatgtcggggcggaggtagtt 28459367
Query: 950 gatccaccgcagccggcagctcttgccgcaccgcagcaggcccgc 994
|||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 28459366 catccaccggaggcggcagctcttgccgcagcgcagcaggcccgc 28459322
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 37385204 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 37385145
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 37385144 tcgttgtccgtcctccccgg 37385125
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 914 gaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctctt 973
|||| |||| |||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 28780583 gaagctgccccgcttcaggtcggggcgcaggtagttgatccaccgcagcctgcagctctt 28780642
Query: 974 gccgcacc 981
||||||||
Sbjct: 28780643 gccgcacc 28780650
Score = 91.7 bits (46), Expect = 8e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 930 aggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcagg 989
||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 11493241 aggtcggcccggaggtagttgatccaccgaagcctgcagctcttgccgcagcgcagcagg 11493182
Query: 990 cc 991
||
Sbjct: 11493181 cc 11493180
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
|||| |||||||||||||||||||||||||||||| |||||||| | || | |||||||
Sbjct: 28459617 tgcgagttccagtagttcttgatctcgttgtccgtgcgccccggcaacctcccggcgatc 28459558
Query: 852 agcgaccac 860
|||||||||
Sbjct: 28459557 agcgaccac 28459549
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3594963 gccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgca 3594904
Query: 980 ccgcagcag 988
||| ||||
Sbjct: 3594903 gcgctgcag 3594895
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 932 gtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 4924098 gtcggggcggaggtagttgagccaccgcagcctgcagctcttgccgcacc 4924147
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 5672130 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 5672182
Score = 67.9 bits (34), Expect = 1e-008
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccc 832
||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 11498440 gtgcgagttccagtagttcttgatctcattgtccgtccgccc 11498399
Score = 65.9 bits (33), Expect = 4e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||||||||||||||||||||||||| ||||||
Sbjct: 1573876 tccagtagttcttgatctcgttgtccgtcctccccgg 1573912
Score = 63.9 bits (32), Expect = 2e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 29782023 cggaggtagttgagccaccggaggcggcagctcttgccgcaccg 29781980
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 28780344 tgttccagaagttcttgatctcgttgtccgtcctccccgg 28780383
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgg 835
||||||||||||||||||||||||||||| ||||||
Sbjct: 11127287 ccagtagttcttgatctcgttgtccgtcctccccgg 11127252
Score = 61.9 bits (31), Expect = 7e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 29104022 cttcaggtcaggcctcaggtagttgatccacctcagcctgcagctcttgcc 29103972
Score = 61.9 bits (31), Expect = 7e-007
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 798 ttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||||||||||
Sbjct: 3582455 ttccagtagttcttgatctcgttgtccgtcc 3582485
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 797 gttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
||||||| ||||||||||||||||||||| || |||||| |||| ||| |||||
Sbjct: 3595194 gttccagaagttcttgatctcgttgtccgacctccccggcagcctcgccgcgat 3595141
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtc 827
|||| |||||||||||||||| |||||||||||||||
Sbjct: 29786477 gtgcatgttccagtagttcttaatctcgttgtccgtc 29786441
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 29782275 gtgttccagtagttcttgacgtcgttgtccgtccggccggggagc 29782231
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 797 gttccagtagttcttgatctcgttgtccgtccg 829
||||||| |||||||||||||||||||||||||
Sbjct: 19900320 gttccagaagttcttgatctcgttgtccgtccg 19900352
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 27906596 cggaggtagttgagccaccgcagcctacagctcttcccgcaccg 27906553
Score = 56.0 bits (28), Expect = 4e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgggag 838
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 25335876 tccagtagttcttgatctcgttgtcggtccggccggggag 25335837
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||| |||||| || |||||| ||||||||||||| |||||| || ||||||||
Sbjct: 11127176 ggtgaagtcgccgcggcgcacgtcggggcggaggtagttgagccaccggaggcggcagct 11127117
Query: 971 ctt 973
|||
Sbjct: 11127116 ctt 11127114
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||| ||||||| ||||| ||||||||||||
Sbjct: 3582793 cttcaggtcaggcctcaggtagttcatccacctcagcctgcagctcttgcc 3582843
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 5672013 ccttctggaggccgaggctgcagccgaagcagag 5672046
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||
Sbjct: 42443447 ccagtagttcttgatctcgttgtc 42443424
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 663 tctgctgctgctgcggcggcggcg 686
||||||||||||||||||||||||
Sbjct: 38661752 tctgctgctgctgcggcggcggcg 38661729
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 37385466 gaggtcgaggttgaggtcggggca 37385443
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 942 aggtagttgatccaccgcagccggcagctctt 973
|||||||||| ||||||||||| |||||||||
Sbjct: 25335733 aggtagttgagccaccgcagcctgcagctctt 25335702
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 41808033 ctgctgctgctgcggcggcggcg 41808011
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 7057069 ctgctgctgctgcggcggcggcg 7057047
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 4640696 ctgctgctgctgcggcggcggcg 4640674
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 766939 ctgctgctgctgcggcggcggcg 766917
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 36145988 ctgctgctgctgcggcggcggc 36145967
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 953 ccaccgcagccggcagctcttgccgcaccg 982
|||||| || ||||||||||||||||||||
Sbjct: 34064284 ccaccggaggcggcagctcttgccgcaccg 34064255
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 28780277 ctgctgctgctgcggcggcggc 28780256
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||| |||||||| |||||||||||||
Sbjct: 4923885 gtgttccagtggttcttgacgtcgttgtccgtcc 4923918
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 658 cggcttctgctgctgctgcggcggcggcgc 687
||||| |||||||||| |||||||||||||
Sbjct: 4640699 cggctgctgctgctgcggcggcggcggcgc 4640670
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 323 bits (163), Expect = 1e-085
Identities = 238/263 (90%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 27541624 acttgttgccgaggaggctgtggagcttgatgatgaggtcgtcctcgtcggcggtgaagt 27541683
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 27541684 tgccgcgcttgaggtcggggcggaggtagttgatccagcggaggcggcagctcttgccgc 27541743
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||| || |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 27541744 agcggaggaggccggcggccttggggagcgagcgccagcagccctcgccgtgggcgcgga 27541803
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 27541804 tgtaggcgacgaggcgctcgtcctcctccttggtccacgcgcccttgttagtgtgctcct 27541863
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 27541864 tctcgcagcacggcgacctcccc 27541886
Score = 153 bits (77), Expect = 2e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 740 ggggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgtt 799
|||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||
Sbjct: 27541429 ggggcggtgcgtgacggggtcgatccccctgccgagaagcttccggcggatgtgcgtgtt 27541488
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgacca 859
||||||||||||||||||||||||||||| |||||| |||| ||| ||||| || |||||
Sbjct: 27541489 ccagtagttcttgatctcgttgtccgtcctccccggcagcctcgccgcgatcagagacca 27541548
Query: 860 c 860
|
Sbjct: 27541549 c 27541549
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 592 acggcgggctgatgcagaggtcgaggttgaggtcggggcatctgggcgccttg 644
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 27541299 acggcgggctgatgcagaggtccaggttgaggtcggggcacttgggcggcttg 27541351
Score = 73.8 bits (37), Expect = 2e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 900 tcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgc 959
|||||||| ||||||| | ||| ||||| ||||| || ||||| |||||| ||||||||
Sbjct: 27481664 tcctcgtctgcggtgaggaggccacgcttgaggtcagggcggagatagttggtccaccgc 27481723
Query: 960 agccggcagctcttgccgcaccgcagcag 988
| ||||||||||||||| || ||||||||
Sbjct: 27481724 aaccggcagctcttgccacagcgcagcag 27481752
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgg 835
||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 24045207 gtgcgtgttccagaagttcttgatctcgttgtccgtcctccccgg 24045251
Score = 73.8 bits (37), Expect = 2e-010
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgca 984
||||||||||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 21233861 ggccggaggtagttggtccaccggagccggcagctcttgctgcaccgca 21233813
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||| |||||||||||||
Sbjct: 21234166 gtgcgtgttccagtagttcttgatgtcgttgtccgtcc 21234129
Score = 60.0 bits (30), Expect = 3e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||| |||||||||||||||||||||||
Sbjct: 20593953 gtgttccagtggttcttgatctcgttgtccgtcc 20593920
Score = 56.0 bits (28), Expect = 4e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 942 aggtagttgatccaccgcagccggcagctctt 973
||||||||||||||||| ||||||||||||||
Sbjct: 2944467 aggtagttgatccaccggagccggcagctctt 2944498
Score = 56.0 bits (28), Expect = 4e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 798 ttccagtagttcttgatctcgttgtccgtccg 829
|||||||||||||||||||||||||| |||||
Sbjct: 2943394 ttccagtagttcttgatctcgttgtcggtccg 2943425
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
|||||||||||||| ||||||| |||| ||||||||| ||||||||
Sbjct: 20593708 ggccggaggtagttcgtccaccgtagcctgcagctcttcccgcaccg 20593662
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 660 gcttctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||||||
Sbjct: 14758928 gcttctgctgctgctgcggcggcggcg 14758902
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 454 ccttctggacgcccaggctgcagccgaagcagag 487
||||||||| ||| ||||||||||||||||||||
Sbjct: 27541182 ccttctggaggccgaggctgcagccgaagcagag 27541215
Score = 52.0 bits (26), Expect = 7e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||| |||||||||||||
Sbjct: 9063489 gtgttccagtagttcttgacatcgttgtccgtcc 9063456
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 661 cttctgctgctgctgcggcggcggcg 686
||||||||||||||||||||||||||
Sbjct: 851021 cttctgctgctgctgcggcggcggcg 851046
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtc 823
|||||||||||| | ||||||||||||||||||
Sbjct: 27479919 gtgcgtgttccaatggttcttgatctcgttgtc 27479951
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 942 aggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||||| |||||||||||| |||||||||||| ||||
Sbjct: 24045461 aggtagttcgtccaccgcagcctgcagctcttgccacacc 24045500
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 494 gccgtggccgtggccgcggccgcc 517
||||||||||||||||||||||||
Sbjct: 1999045 gccgtggccgtggccgcggccgcc 1999068
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 492 ccgccgtggccgtggccgcggc 513
||||||||||||||||||||||
Sbjct: 19604441 ccgccgtggccgtggccgcggc 19604420
>dbj|AK063027.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-B12, full
insert sequence
Length = 1027
Score = 319 bits (161), Expect = 2e-084
Identities = 326/381 (85%)
Strand = Plus / Minus
Query: 741 gggcggtgcgtgacggggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttc 800
||||||||||||| ||||||| ||| | | | || ||||| ||| || ||| ||||||
Sbjct: 440 gggcggtgcgtgagcgggtcgaggccgcgggcgaggagcttgcgcttgatgtgggtgttc 381
Query: 801 cagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccac 860
|||||||||||||||||||||||||||| |||||| |||| | ||||||| |||||||||
Sbjct: 380 cagtagttcttgatctcgttgtccgtcctccccggcagcctcccggcgatcagcgaccac 321
Query: 861 ttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttg 920
||||| |||||||| ||| ||||||| |||||| ||||| || ||| |||||||||||
Sbjct: 320 ttgttgccgaggagctcgtggagcttgatgatgagctcgtcttcctcgtcggtgaagttg 261
Query: 921 ccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcac 980
|||||||| |||||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 260 ccgcgcttgaggtcggggcggaggtagttgatccaccggaggcggcagctcttcccgcaa 201
Query: 981 cgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatg 1040
||||||| || || |||||||| ||||||| |||||| || ||||||||| | ||||
Sbjct: 200 cgcagcaacccggcggccttggggagcgacctccagcagccctcgccgtgctggttgatg 141
Query: 1041 taggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttc 1100
| ||| | ||||||| ||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 140 tgggcgatgaggcgctggtcctcctccttggtccacgcgcccttgttcgtgtgcgccttc 81
Query: 1101 tcgcagcagggcgaccgcccc 1121
|||||||| ||||||| ||||
Sbjct: 80 tcgcagcacggcgacctcccc 60
>gb|C73695.1|C73695 C73695 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20178_2A, mRNA sequence
Length = 427
Score = 311 bits (157), Expect = 4e-082
Identities = 285/328 (86%)
Strand = Plus / Minus
Query: 794 cgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgag 853
||||||| ||||||||||||||||||||||||||| |||||| ||| || | || || |
Sbjct: 396 cgtgttcaagtagttcttgatctcgttgtccgtcctccccggcagctgccccgcaatcaa 337
Query: 854 cgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggt 913
|||||||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| ||||
Sbjct: 336 cgaccacttgttgccgagaaggncgtggagcttgatgatgagctcgtcgtcgtcgtcggt 277
Query: 914 gaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctctt 973
||||||||||||||| |||||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 276 gaagttgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctctt 217
Query: 974 gccgcaccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgc 1033
|||||| || || || ||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 216 gccgcagcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgc 157
Query: 1034 gcggatgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtg 1093
||||||||| | ||| |||| |||||||||||| |||||||| ||| |||| |||||
Sbjct: 156 cttgatgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtg 97
Query: 1094 cgccttctcgcagcagggcgaccgcccc 1121
||||||||||||||| ||||||| ||||
Sbjct: 96 cgccttctcgcagcatggcgacctcccc 69
>gb|AACV01012232.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012232, whole
genome shotgun sequence
Length = 74847
Score = 260 bits (131), Expect = 1e-066
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| || || |||||| |||||||||||| |||||||||
Sbjct: 49581 acttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtcggtgaagt 49640
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct: 49641 tgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgc 49700
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||||||||||||||||||||| |||||||| |||||||| ||||| | ||
Sbjct: 49701 agcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatgcgccctga 49760
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
|||| || | || |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 49761 tgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 49820
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 49821 tctcgcagcacggcgacctcccc 49843
Score = 91.7 bits (46), Expect = 8e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 49413 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 49472
Query: 851 gagcgaccac 860
|| ||||||
Sbjct: 49473 cagagaccac 49482
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 260 bits (131), Expect = 1e-066
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| || || |||||| |||||||||||| |||||||||
Sbjct: 2261301 acttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtcggtgaagt 2261360
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct: 2261361 tgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgc 2261420
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||||||||||||||||||||| |||||||| |||||||| ||||| | ||
Sbjct: 2261421 agcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatgcgccctga 2261480
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
|||| || | || |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 2261481 tgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 2261540
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 2261541 tctcgcagcacggcgacctcccc 2261563
Score = 91.7 bits (46), Expect = 8e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 2261133 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 2261192
Query: 851 gagcgaccac 860
|| ||||||
Sbjct: 2261193 cagagaccac 2261202
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 663 tctgctgctgctgcggcggcggcgc 687
|||||||||||||||||||||||||
Sbjct: 687120 tctgctgctgctgcggcggcggcgc 687144
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0048I21, complete sequence
Length = 137650
Score = 260 bits (131), Expect = 1e-066
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| || || |||||| |||||||||||| |||||||||
Sbjct: 82715 acttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtcggtgaagt 82774
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct: 82775 tgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgc 82834
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||||||||||||||||||||| |||||||| |||||||| ||||| | ||
Sbjct: 82835 agcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatgcgccctga 82894
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
|||| || | || |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 82895 tgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 82954
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 82955 tctcgcagcacggcgacctcccc 82977
Score = 91.7 bits (46), Expect = 8e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 82547 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 82606
Query: 851 gagcgaccac 860
|| ||||||
Sbjct: 82607 cagagaccac 82616
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 260 bits (131), Expect = 1e-066
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| || || |||||| |||||||||||| |||||||||
Sbjct: 3311622 acttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtcggtgaagt 3311681
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct: 3311682 tgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgc 3311741
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||||||||||||||||||||| |||||||| |||||||| ||||| | ||
Sbjct: 3311742 agcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatgcgccctga 3311801
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
|||| || | || |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 3311802 tgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 3311861
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 3311862 tctcgcagcacggcgacctcccc 3311884
Score = 93.7 bits (47), Expect = 2e-016
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 921 ccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
|||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 9201907 ccgcgcttcaggtctggcctgaggtagttgatccaccgcagcctgcagctcttgccgca 9201849
Score = 91.7 bits (46), Expect = 8e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 3311454 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 3311513
Query: 851 gagcgaccac 860
|| ||||||
Sbjct: 3311514 cagagaccac 3311523
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 9202157 tgttccagaagttcttgatctcgttgtccgtcctccccgg 9202118
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||| |||||||||| || |||||| || |||||||| | |||||||||||||||||||
Sbjct: 10531085 gtgatgttgccgcgccgcacgtcgggtcgcaggtagttcagccaccgcagccggcagctc 10531026
Query: 972 tt 973
||
Sbjct: 10531025 tt 10531024
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 942 aggtagttgatccaccgcagccggcagctcttgccgca 979
|||||||||| |||||| |||| |||||||||||||||
Sbjct: 9733970 aggtagttgagccaccggagcctgcagctcttgccgca 9734007
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 9733731 gtgttccagtagttcttgacgtcgttgtcagtccggccggggagc 9733775
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 663 tctgctgctgctgcggcggcggcgc 687
|||||||||||||||||||||||||
Sbjct: 1794198 tctgctgctgctgcggcggcggcgc 1794222
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 10473080 ctgctgctgctgcggcggcggcg 10473058
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 660 gcttctgctgctgctgcggcggcggcg 686
|||||||||||||| ||||||||||||
Sbjct: 10395359 gcttctgctgctgcggcggcggcggcg 10395385
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 487 gcgccccgccgtggccgtggccgcggccgc 516
|||| |||||||| ||||||||||||||||
Sbjct: 10695849 gcgcgccgccgtgcccgtggccgcggccgc 10695820
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 260 bits (131), Expect = 1e-066
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| || || |||||| |||||||||||| |||||||||
Sbjct: 20611935 acttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtcggtgaagt 20611994
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct: 20611995 tgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgc 20612054
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||||||||||||||||||||| |||||||| |||||||| ||||| | ||
Sbjct: 20612055 agcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatgcgccctga 20612114
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
|||| || | || |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 20612115 tgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 20612174
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 20612175 tctcgcagcacggcgacctcccc 20612197
Score = 93.7 bits (47), Expect = 2e-016
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 921 ccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
|||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 26502220 ccgcgcttcaggtctggcctgaggtagttgatccaccgcagcctgcagctcttgccgca 26502162
Score = 91.7 bits (46), Expect = 8e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 20611767 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 20611826
Query: 851 gagcgaccac 860
|| ||||||
Sbjct: 20611827 cagagaccac 20611836
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 900 tcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgc 959
|||||||||||||||| | ||||||||| ||| |||| |||||||||| | ||||||
Sbjct: 763778 tcctcgtcggcggtgatgcggccgcgcttgaggccggggtggaggtagttcacccaccgg 763719
Query: 960 agccggcagctcttgcc 976
|| ||||||||||||||
Sbjct: 763718 agacggcagctcttgcc 763702
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 26502470 tgttccagaagttcttgatctcgttgtccgtcctccccgg 26502431
Score = 63.9 bits (32), Expect = 2e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 902 ctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcag 961
|||||||||||||| ||||||||| | |||||| ||||||||||| | |||||| ||
Sbjct: 1849265 ctcgtcggcggtgatgttgccgcggcggacgtcggggcggaggtagttcagccaccggag 1849324
Query: 962 ccggcagctcttgccg 977
|||||||||||||||
Sbjct: 1849325 acggcagctcttgccg 1849340
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||| |||||||||| || |||||| || |||||||| | |||||||||||||||||||
Sbjct: 27831398 gtgatgttgccgcgccgcacgtcgggtcgcaggtagttcagccaccgcagccggcagctc 27831339
Query: 972 tt 973
||
Sbjct: 27831338 tt 27831337
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 942 aggtagttgatccaccgcagccggcagctcttgccgca 979
|||||||||| |||||| |||| |||||||||||||||
Sbjct: 27034283 aggtagttgagccaccggagcctgcagctcttgccgca 27034320
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 27034044 gtgttccagtagttcttgacgtcgttgtcagtccggccggggagc 27034088
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 663 tctgctgctgctgcggcggcggcgc 687
|||||||||||||||||||||||||
Sbjct: 19094511 tctgctgctgctgcggcggcggcgc 19094535
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 27773393 ctgctgctgctgcggcggcggcg 27773371
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 660 gcttctgctgctgctgcggcggcggcg 686
|||||||||||||| ||||||||||||
Sbjct: 27695672 gcttctgctgctgcggcggcggcggcg 27695698
Score = 46.1 bits (23), Expect = 0.041
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 945 tagttgatccaccgcagccggcagctcttgccgca 979
||||| ||||||| ||||| |||||||||||||||
Sbjct: 2289497 tagtttatccacctcagcctgcagctcttgccgca 2289463
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 487 gcgccccgccgtggccgtggccgcggccgc 516
|||| |||||||| ||||||||||||||||
Sbjct: 27996162 gcgcgccgccgtgcccgtggccgcggccgc 27996133
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 9368810 ctgctgctgctgcggcggcggc 9368831
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 665 tgctgctgctgcggcggcggcg 686
||||||||||||||||||||||
Sbjct: 6595146 tgctgctgctgcggcggcggcg 6595167
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 260 bits (131), Expect = 1e-066
Identities = 230/263 (87%)
Strand = Plus / Plus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| |||||||||||||| || || |||||| |||||||||||| |||||||||
Sbjct: 20955937 acttgttgccgaggaggctgtggaggcggatgatgagctcgtcctcgtcgtcggtgaagt 20955996
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct: 20955997 tgccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgc 20956056
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || ||||||||||||||||||||||| |||||||| |||||||| ||||| | ||
Sbjct: 20956057 agcgaaggaggcccgccgccttgggcagcgagcgccagcagccttcgccatgcgccctga 20956116
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
|||| || | || |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 20956117 tgtacgcgatgagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 20956176
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 20956177 tctcgcagcacggcgacctcccc 20956199
Score = 93.7 bits (47), Expect = 2e-016
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 921 ccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
|||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 26781158 ccgcgcttcaggtctggcctgaggtagttgatccaccgcagcctgcagctcttgccgca 26781100
Score = 91.7 bits (46), Expect = 8e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
|||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||
Sbjct: 20955769 gtgcgtgttccagtagttcttgatctcgttgtccgtcctccccggcagctgcccggcgat 20955828
Query: 851 gagcgaccac 860
|| ||||||
Sbjct: 20955829 cagagaccac 20955838
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 900 tcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgc 959
|||||||||||||||| | ||||||||| ||| |||| |||||||||| | ||||||
Sbjct: 771097 tcctcgtcggcggtgatgcggccgcgcttgaggccggggtggaggtagttcacccaccgg 771038
Query: 960 agccggcagctcttgcc 976
|| ||||||||||||||
Sbjct: 771037 agacggcagctcttgcc 771021
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 26781408 tgttccagaagttcttgatctcgttgtccgtcctccccgg 26781369
Score = 63.9 bits (32), Expect = 2e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 902 ctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcag 961
|||||||||||||| ||||||||| | |||||| ||||||||||| | |||||| ||
Sbjct: 1848260 ctcgtcggcggtgatgttgccgcggcggacgtcggggcggaggtagttcagccaccggag 1848319
Query: 962 ccggcagctcttgccg 977
|||||||||||||||
Sbjct: 1848320 acggcagctcttgccg 1848335
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||| |||||||||| || |||||| || |||||||| | |||||||||||||||||||
Sbjct: 28076818 gtgatgttgccgcgccgcacgtcgggtcgcaggtagttcagccaccgcagccggcagctc 28076759
Query: 972 tt 973
||
Sbjct: 28076758 tt 28076757
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 942 aggtagttgatccaccgcagccggcagctcttgccgca 979
|||||||||| |||||| |||| |||||||||||||||
Sbjct: 27305473 aggtagttgagccaccggagcctgcagctcttgccgca 27305510
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 27305234 gtgttccagtagttcttgacgtcgttgtcagtccggccggggagc 27305278
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 663 tctgctgctgctgcggcggcggcgc 687
|||||||||||||||||||||||||
Sbjct: 19381717 tctgctgctgctgcggcggcggcgc 19381741
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 28019601 ctgctgctgctgcggcggcggcg 28019579
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 660 gcttctgctgctgctgcggcggcggcg 686
|||||||||||||| ||||||||||||
Sbjct: 27934652 gcttctgctgctgcggcggcggcggcg 27934678
Score = 46.1 bits (23), Expect = 0.041
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 945 tagttgatccaccgcagccggcagctcttgccgca 979
||||| ||||||| ||||| |||||||||||||||
Sbjct: 2253314 tagtttatccacctcagcctgcagctcttgccgca 2253280
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 487 gcgccccgccgtggccgtggccgcggccgc 516
|||| |||||||| ||||||||||||||||
Sbjct: 28262535 gcgcgccgccgtgcccgtggccgcggccgc 28262506
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 8350758 ctgctgctgctgcggcggcggc 8350779
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 665 tgctgctgctgcggcggcggcg 686
||||||||||||||||||||||
Sbjct: 6689179 tgctgctgctgcggcggcggcg 6689200
>gb|AU082322.1|AU082322 AU082322 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20080, mRNA sequence
Length = 457
Score = 258 bits (130), Expect = 6e-066
Identities = 307/366 (83%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 396 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 337
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||| | || || | || | |||| || || ||||| ||||| || | |||
Sbjct: 336 tcgttgtccgttcttcctggcaacctcccggctatcagagaccatttgttgcctaaaagg 277
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||||
Sbjct: 276 ctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgaggtca 217
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
||||||||||||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 216 ggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccggcg 157
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
|||||||||||||| |||||||| |||||||||||||| ||||||||| | || ||
Sbjct: 156 gccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagccgg 97
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|| || |||||||||||||| || ||| |||||||||| |||||||||||||| || |||
Sbjct: 96 tcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggtgac 37
Query: 1116 cgcccc 1121
| ||||
Sbjct: 36 ctcccc 31
>gb|AU082325.1|AU082325 AU082325 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20703, mRNA sequence
Length = 467
Score = 258 bits (130), Expect = 6e-066
Identities = 307/366 (83%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 412 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 353
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||| | || || | || | |||| || || ||||| ||||| || | |||
Sbjct: 352 tcgttgtccgttcttcctggcaacctcccggctatcagagaccatttgttgcctaaaagg 293
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||||
Sbjct: 292 ctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgaggtca 233
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
||||||||||||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 232 ggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccggcg 173
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
|||||||||||||| |||||||| |||||||||||||| ||||||||| | || ||
Sbjct: 172 gccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagccgg 113
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|| || |||||||||||||| || ||| |||||||||| |||||||||||||| || |||
Sbjct: 112 tcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggtgac 53
Query: 1116 cgcccc 1121
| ||||
Sbjct: 52 ctcccc 47
>gb|AU173093.1|AU173093 AU173093 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R0446, mRNA sequence
Length = 445
Score = 258 bits (130), Expect = 6e-066
Identities = 307/366 (83%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 435 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 376
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||| | || || | || | |||| || || ||||| ||||| || | |||
Sbjct: 375 tcgttgtccgttcttcctggcaacctcccggctatcagagaccatttgttgcctaaaagg 316
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||||
Sbjct: 315 ctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgaggtca 256
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
||||||||||||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 255 ggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccggcg 196
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
|||||||||||||| |||||||| |||||||||||||| ||||||||| | || ||
Sbjct: 195 gccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagccgg 136
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|| || |||||||||||||| || ||| |||||||||| |||||||||||||| || |||
Sbjct: 135 tcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggtgac 76
Query: 1116 cgcccc 1121
| ||||
Sbjct: 75 ctcccc 70
>gb|AU184006.1|AU184006 AU184006 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R0351, mRNA sequence
Length = 446
Score = 258 bits (130), Expect = 6e-066
Identities = 307/366 (83%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 435 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 376
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||| | || || | || | |||| || || ||||| ||||| || | |||
Sbjct: 375 tcgttgtccgttcttcctggcaacctcccggctatcagagaccatttgttgcctaaaagg 316
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||||
Sbjct: 315 ctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgaggtca 256
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
||||||||||||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 255 ggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccggcg 196
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
|||||||||||||| |||||||| |||||||||||||| ||||||||| | || ||
Sbjct: 195 gccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagccgg 136
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|| || |||||||||||||| || ||| |||||||||| |||||||||||||| || |||
Sbjct: 135 tcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggtgac 76
Query: 1116 cgcccc 1121
| ||||
Sbjct: 75 ctcccc 70
>dbj|AK104408.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E04, full
insert sequence
Length = 1054
Score = 258 bits (130), Expect = 6e-066
Identities = 307/366 (83%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 461 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 402
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||| | || || | || | |||| || || ||||| ||||| || | |||
Sbjct: 401 tcgttgtccgttcttcctggcaacctcccggctatcagagaccatttgttgcctaaaagg 342
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||||
Sbjct: 341 ctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgaggtca 282
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
||||||||||||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 281 ggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccggcg 222
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
|||||||||||||| |||||||| |||||||||||||| ||||||||| | || ||
Sbjct: 221 gccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagccgg 162
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|| || |||||||||||||| || ||| |||||||||| |||||||||||||| || |||
Sbjct: 161 tcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggtgac 102
Query: 1116 cgcccc 1121
| ||||
Sbjct: 101 ctcccc 96
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 685 ggctgatgcagaggtccagattgaggtcagggca 652
>dbj|AK104457.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B02, full
insert sequence
Length = 1048
Score = 258 bits (130), Expect = 6e-066
Identities = 307/366 (83%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 461 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 402
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||| | || || | || | |||| || || ||||| ||||| || | |||
Sbjct: 401 tcgttgtccgttcttcctggcaacctcccggctatcagagaccatttgttgcctaaaagg 342
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||||
Sbjct: 341 ctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgaggtca 282
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
||||||||||||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 281 ggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccggcg 222
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
|||||||||||||| |||||||| |||||||||||||| ||||||||| | || ||
Sbjct: 221 gccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagccgg 162
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|| || |||||||||||||| || ||| |||||||||| |||||||||||||| || |||
Sbjct: 161 tcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggtgac 102
Query: 1116 cgcccc 1121
| ||||
Sbjct: 101 ctcccc 96
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 685 ggctgatgcagaggtccagattgaggtcagggca 652
>dbj|AK111966.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-H01, full
insert sequence
Length = 1052
Score = 258 bits (130), Expect = 6e-066
Identities = 307/366 (83%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 463 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 404
Query: 816 tcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgttcccgaggagg 875
||||||||||| | || || | || | |||| || || ||||| ||||| || | |||
Sbjct: 403 tcgttgtccgttcttcctggcaacctcccggctatcagagaccatttgttgcctaaaagg 344
Query: 876 ctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcg 935
||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||||
Sbjct: 343 ctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgaggtca 284
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgcc 995
||||||||||||||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 283 ggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccggcg 224
Query: 996 gccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgc 1055
|||||||||||||| |||||||| |||||||||||||| ||||||||| | || ||
Sbjct: 223 gccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagccgg 164
Query: 1056 tcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|| || |||||||||||||| || ||| |||||||||| |||||||||||||| || |||
Sbjct: 163 tcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggtgac 104
Query: 1116 cgcccc 1121
| ||||
Sbjct: 103 ctcccc 98
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 687 ggctgatgcagaggtccagattgaggtcagggca 654
>gb|AU082180.1|AU082180 AU082180 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S0683, mRNA sequence
Length = 350
Score = 256 bits (129), Expect = 2e-065
Identities = 233/268 (86%)
Strand = Plus / Minus
Query: 854 cgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggt 913
|||||||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| ||||
Sbjct: 339 cgaccacttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggt 280
Query: 914 gaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctctt 973
||||||||||||||| |||||||| ||||||| ||| ||||| || || |||||||||||
Sbjct: 279 gaagttgccgcgcttgaggtcggggcggaggtngttcatccagcggaggcggcagctctt 220
Query: 974 gccgcaccgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgc 1033
|||||| || || || ||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 219 gccgcagcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgc 160
Query: 1034 gcggatgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtg 1093
||||||||| | ||| |||| |||||||||||| |||||||| ||| |||| |||||
Sbjct: 159 cttgatgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtg 100
Query: 1094 cgccttctcgcagcagggcgaccgcccc 1121
||||||||||||||| ||||||| ||||
Sbjct: 99 cgccttctcgcagcatggcgacctcccc 72
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0648C09
Length = 107522
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 22149 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 22090
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 22089 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 22030
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 22029 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 21970
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 21969 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 21910
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 21909 tctcgcagcatggcgacctcccc 21887
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 22334 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 22275
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 22274 tcgttgtccgtcctccccgg 22255
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 22596 gaggtcgaggttgaggtcggggca 22573
>gb|AACV01002776.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002776, whole
genome shotgun sequence
Length = 36030
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 1438 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 1379
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 1378 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 1319
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 1318 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 1259
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 1258 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 1199
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 1198 tctcgcagcatggcgacctcccc 1176
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 1623 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 1564
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 1563 tcgttgtccgtcctccccgg 1544
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 1885 gaggtcgaggttgaggtcggggca 1862
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 38006543 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 38006484
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 38006483 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 38006424
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 38006423 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 38006364
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 38006363 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 38006304
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 38006303 tctcgcagcatggcgacctcccc 38006281
Score = 97.6 bits (49), Expect = 1e-017
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 890 gatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagtt 949
||||||||| ||||||||| ||| || | || |||||| | |||||| |||||||||||
Sbjct: 28870751 gatgaggtcctcctcgtcgtcggcgatggggcagcgcttgatgtcggggcggaggtagtt 28870692
Query: 950 gatccaccgcagccggcagctcttgccgcaccgcagcaggcccgc 994
|||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 28870691 catccaccggaggcggcagctcttgccgcagcgcagcaggcccgc 28870647
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 38006728 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 38006669
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 38006668 tcgttgtccgtcctccccgg 38006649
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 914 gaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctctt 973
|||| |||| |||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 29207236 gaagctgccccgcttcaggtcggggcgcaggtagttgatccaccgcagcctgcagctctt 29207295
Query: 974 gccgcacc 981
||||||||
Sbjct: 29207296 gccgcacc 29207303
Score = 91.7 bits (46), Expect = 8e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 930 aggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcagg 989
||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 11346661 aggtcggcccggaggtagttgatccaccgaagcctgcagctcttgccgcagcgcagcagg 11346602
Query: 990 cc 991
||
Sbjct: 11346601 cc 11346600
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
|||| |||||||||||||||||||||||||||||| |||||||| | || | |||||||
Sbjct: 28870942 tgcgagttccagtagttcttgatctcgttgtccgtgcgccccggcaacctcccggcgatc 28870883
Query: 852 agcgaccac 860
|||||||||
Sbjct: 28870882 agcgaccac 28870874
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3529888 gccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgca 3529829
Query: 980 ccgcagcag 988
||| ||||
Sbjct: 3529828 gcgctgcag 3529820
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 932 gtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 4915601 gtcggggcggaggtagttgagccaccgcagcctgcagctcttgccgcacc 4915650
Score = 67.9 bits (34), Expect = 1e-008
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccc 832
||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 11351860 gtgcgagttccagtagttcttgatctcattgtccgtccgccc 11351819
Score = 65.9 bits (33), Expect = 4e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||||||||||||||||||||||||| ||||||
Sbjct: 1547120 tccagtagttcttgatctcgttgtccgtcctccccgg 1547156
Score = 63.9 bits (32), Expect = 2e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 30191656 cggaggtagttgagccaccggaggcggcagctcttgccgcaccg 30191613
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 29206997 tgttccagaagttcttgatctcgttgtccgtcctccccgg 29207036
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgg 835
||||||||||||||||||||||||||||| ||||||
Sbjct: 10931196 ccagtagttcttgatctcgttgtccgtcctccccgg 10931161
Score = 61.9 bits (31), Expect = 7e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 29543954 cttcaggtcaggcctcaggtagttgatccacctcagcctgcagctcttgcc 29543904
Score = 61.9 bits (31), Expect = 7e-007
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 798 ttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||||||||||
Sbjct: 3518046 ttccagtagttcttgatctcgttgtccgtcc 3518076
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 797 gttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
||||||| ||||||||||||||||||||| || |||||| |||| ||| |||||
Sbjct: 3530119 gttccagaagttcttgatctcgttgtccgacctccccggcagcctcgccgcgat 3530066
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtc 827
|||| |||||||||||||||| |||||||||||||||
Sbjct: 30196108 gtgcatgttccagtagttcttaatctcgttgtccgtc 30196072
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 30191908 gtgttccagtagttcttgacgtcgttgtccgtccggccggggagc 30191864
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 797 gttccagtagttcttgatctcgttgtccgtccg 829
||||||| |||||||||||||||||||||||||
Sbjct: 20316456 gttccagaagttcttgatctcgttgtccgtccg 20316488
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 28324352 cggaggtagttgagccaccgcagcctacagctcttcccgcaccg 28324309
Score = 56.0 bits (28), Expect = 4e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgggag 838
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 25667095 tccagtagttcttgatctcgttgtcggtccggccggggag 25667056
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||| |||||| || |||||| ||||||||||||| |||||| || ||||||||
Sbjct: 10931085 ggtgaagtcgccgcggcgcacgtcggggcggaggtagttgagccaccggaggcggcagct 10931026
Query: 971 ctt 973
|||
Sbjct: 10931025 ctt 10931023
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||| ||||||| ||||| ||||||||||||
Sbjct: 3518384 cttcaggtcaggcctcaggtagttcatccacctcagcctgcagctcttgcc 3518434
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||
Sbjct: 43170171 ccagtagttcttgatctcgttgtc 43170148
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 663 tctgctgctgctgcggcggcggcg 686
||||||||||||||||||||||||
Sbjct: 39285564 tctgctgctgctgcggcggcggcg 39285541
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 38006990 gaggtcgaggttgaggtcggggca 38006967
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 942 aggtagttgatccaccgcagccggcagctctt 973
|||||||||| ||||||||||| |||||||||
Sbjct: 25666952 aggtagttgagccaccgcagcctgcagctctt 25666921
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 42484896 ctgctgctgctgcggcggcggcg 42484874
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 494 gccgtggccgtggccgcggccgc 516
|||||||||||||||||||||||
Sbjct: 32981260 gccgtggccgtggccgcggccgc 32981238
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 494 gccgtggccgtggccgcggccgc 516
|||||||||||||||||||||||
Sbjct: 32974908 gccgtggccgtggccgcggccgc 32974886
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 6976713 ctgctgctgctgcggcggcggcg 6976691
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 4587823 ctgctgctgctgcggcggcggcg 4587801
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 746327 ctgctgctgctgcggcggcggcg 746305
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 36772576 ctgctgctgctgcggcggcggc 36772555
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 953 ccaccgcagccggcagctcttgccgcaccg 982
|||||| || ||||||||||||||||||||
Sbjct: 34583592 ccaccggaggcggcagctcttgccgcaccg 34583563
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 29206930 ctgctgctgctgcggcggcggc 29206909
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||| |||||||| |||||||||||||
Sbjct: 4915388 gtgttccagtggttcttgacgtcgttgtccgtcc 4915421
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 658 cggcttctgctgctgctgcggcggcggcgc 687
||||| |||||||||| |||||||||||||
Sbjct: 4587826 cggctgctgctgctgcggcggcggcggcgc 4587797
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 12453926 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 12453867
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 12453866 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 12453807
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 12453806 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 12453747
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 12453746 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 12453687
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 12453686 tctcgcagcatggcgacctcccc 12453664
Score = 97.6 bits (49), Expect = 1e-017
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 890 gatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagtt 949
||||||||| ||||||||| ||| || | || |||||| | |||||| |||||||||||
Sbjct: 3318134 gatgaggtcctcctcgtcgtcggcgatggggcagcgcttgatgtcggggcggaggtagtt 3318075
Query: 950 gatccaccgcagccggcagctcttgccgcaccgcagcaggcccgc 994
|||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 3318074 catccaccggaggcggcagctcttgccgcagcgcagcaggcccgc 3318030
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 12454111 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 12454052
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 12454051 tcgttgtccgtcctccccgg 12454032
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 914 gaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctctt 973
|||| |||| |||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 3654619 gaagctgccccgcttcaggtcggggcgcaggtagttgatccaccgcagcctgcagctctt 3654678
Query: 974 gccgcacc 981
||||||||
Sbjct: 3654679 gccgcacc 3654686
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
|||| |||||||||||||||||||||||||||||| |||||||| | || | |||||||
Sbjct: 3318325 tgcgagttccagtagttcttgatctcgttgtccgtgcgccccggcaacctcccggcgatc 3318266
Query: 852 agcgaccac 860
|||||||||
Sbjct: 3318265 agcgaccac 3318257
Score = 63.9 bits (32), Expect = 2e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 4639039 cggaggtagttgagccaccggaggcggcagctcttgccgcaccg 4638996
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 3654380 tgttccagaagttcttgatctcgttgtccgtcctccccgg 3654419
Score = 61.9 bits (31), Expect = 7e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 3991337 cttcaggtcaggcctcaggtagttgatccacctcagcctgcagctcttgcc 3991287
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtc 827
|||| |||||||||||||||| |||||||||||||||
Sbjct: 4643491 gtgcatgttccagtagttcttaatctcgttgtccgtc 4643455
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 4639291 gtgttccagtagttcttgacgtcgttgtccgtccggccggggagc 4639247
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 2771735 cggaggtagttgagccaccgcagcctacagctcttcccgcaccg 2771692
Score = 56.0 bits (28), Expect = 4e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgggag 838
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 114478 tccagtagttcttgatctcgttgtcggtccggccggggag 114439
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 663 tctgctgctgctgcggcggcggcg 686
||||||||||||||||||||||||
Sbjct: 13732947 tctgctgctgctgcggcggcggcg 13732924
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 12454373 gaggtcgaggttgaggtcggggca 12454350
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 942 aggtagttgatccaccgcagccggcagctctt 973
|||||||||| ||||||||||| |||||||||
Sbjct: 114335 aggtagttgagccaccgcagcctgcagctctt 114304
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 494 gccgtggccgtggccgcggccgc 516
|||||||||||||||||||||||
Sbjct: 7428643 gccgtggccgtggccgcggccgc 7428621
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 494 gccgtggccgtggccgcggccgc 516
|||||||||||||||||||||||
Sbjct: 7422291 gccgtggccgtggccgcggccgc 7422269
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 11219959 ctgctgctgctgcggcggcggc 11219938
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 953 ccaccgcagccggcagctcttgccgcaccg 982
|||||| || ||||||||||||||||||||
Sbjct: 9030975 ccaccggaggcggcagctcttgccgcaccg 9030946
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 3654313 ctgctgctgctgcggcggcggc 3654292
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0491F11
Length = 152274
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 147229 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 147170
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 147169 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 147110
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 147109 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 147050
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 147049 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 146990
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 146989 tctcgcagcatggcgacctcccc 146967
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 147414 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 147355
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 147354 tcgttgtccgtcctccccgg 147335
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 147676 gaggtcgaggttgaggtcggggca 147653
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0698A10
Length = 137348
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 6817 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 6758
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 6757 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 6698
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 6697 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 6638
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 6637 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 6578
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 6577 tctcgcagcatggcgacctcccc 6555
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 7002 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 6943
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 6942 tcgttgtccgtcctccccgg 6923
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 7264 gaggtcgaggttgaggtcggggca 7241
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 12183298 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 12183239
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 12183238 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 12183179
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 12183178 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 12183119
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 12183118 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 12183059
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 12183058 tctcgcagcatggcgacctcccc 12183036
Score = 97.6 bits (49), Expect = 1e-017
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 890 gatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagtt 949
||||||||| ||||||||| ||| || | || |||||| | |||||| |||||||||||
Sbjct: 3257705 gatgaggtcctcctcgtcgtcggcgatggggcagcgcttgatgtcggggcggaggtagtt 3257646
Query: 950 gatccaccgcagccggcagctcttgccgcaccgcagcaggcccgc 994
|||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 3257645 catccaccggaggcggcagctcttgccgcagcgcagcaggcccgc 3257601
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 12183483 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 12183424
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 12183423 tcgttgtccgtcctccccgg 12183404
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 914 gaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctctt 973
|||| |||| |||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 3578862 gaagctgccccgcttcaggtcggggcgcaggtagttgatccaccgcagcctgcagctctt 3578921
Query: 974 gccgcacc 981
||||||||
Sbjct: 3578922 gccgcacc 3578929
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
|||| |||||||||||||||||||||||||||||| |||||||| | || | |||||||
Sbjct: 3257896 tgcgagttccagtagttcttgatctcgttgtccgtgcgccccggcaacctcccggcgatc 3257837
Query: 852 agcgaccac 860
|||||||||
Sbjct: 3257836 agcgaccac 3257828
Score = 63.9 bits (32), Expect = 2e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 4580302 cggaggtagttgagccaccggaggcggcagctcttgccgcaccg 4580259
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 3578623 tgttccagaagttcttgatctcgttgtccgtcctccccgg 3578662
Score = 61.9 bits (31), Expect = 7e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 3902301 cttcaggtcaggcctcaggtagttgatccacctcagcctgcagctcttgcc 3902251
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtc 827
|||| |||||||||||||||| |||||||||||||||
Sbjct: 4584756 gtgcatgttccagtagttcttaatctcgttgtccgtc 4584720
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 4580554 gtgttccagtagttcttgacgtcgttgtccgtccggccggggagc 4580510
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 2704875 cggaggtagttgagccaccgcagcctacagctcttcccgcaccg 2704832
Score = 56.0 bits (28), Expect = 4e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgggag 838
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 134155 tccagtagttcttgatctcgttgtcggtccggccggggag 134116
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||
Sbjct: 17241726 ccagtagttcttgatctcgttgtc 17241703
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 663 tctgctgctgctgcggcggcggcg 686
||||||||||||||||||||||||
Sbjct: 13460031 tctgctgctgctgcggcggcggcg 13460008
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 12183745 gaggtcgaggttgaggtcggggca 12183722
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 942 aggtagttgatccaccgcagccggcagctctt 973
|||||||||| ||||||||||| |||||||||
Sbjct: 134012 aggtagttgagccaccgcagcctgcagctctt 133981
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 16606312 ctgctgctgctgcggcggcggcg 16606290
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 10944267 ctgctgctgctgcggcggcggc 10944246
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 953 ccaccgcagccggcagctcttgccgcaccg 982
|||||| || ||||||||||||||||||||
Sbjct: 8862563 ccaccggaggcggcagctcttgccgcaccg 8862534
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 3578556 ctgctgctgctgcggcggcggc 3578535
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 252 bits (127), Expect = 4e-064
Identities = 229/263 (87%)
Strand = Plus / Minus
Query: 859 acttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagt 918
||||||| ||||| ||| ||| ||||||| |||||| ||||| |||||| |||||||||
Sbjct: 37925873 acttgttgccgagaagggcgtggagcttgatgatgagctcgtcgtcgtcgtcggtgaagt 37925814
Query: 919 tgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgc 978
|||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||
Sbjct: 37925813 tgccgcgcttgaggtcggggcggaggtagttcatccagcggaggcggcagctcttgccgc 37925754
Query: 979 accgcagcaggcccgccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcgga 1038
| || || || ||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 37925753 agcggaggagccccgccgccttgggcagcgaccgccagcaaccctcgccgtgcgccttga 37925694
Query: 1039 tgtaggccaccaggcgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgcct 1098
||||||| | ||| |||| |||||||||||| |||||||| ||| |||| ||||||||||
Sbjct: 37925693 tgtaggcgatcagccgctggtcctcctccttcgtccacgcccccttgttcgtgtgcgcct 37925634
Query: 1099 tctcgcagcagggcgaccgcccc 1121
|||||||||| ||||||| ||||
Sbjct: 37925633 tctcgcagcatggcgacctcccc 37925611
Score = 97.6 bits (49), Expect = 1e-017
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 890 gatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagtt 949
||||||||| ||||||||| ||| || | || |||||| | |||||| |||||||||||
Sbjct: 28790081 gatgaggtcctcctcgtcgtcggcgatggggcagcgcttgatgtcggggcggaggtagtt 28790022
Query: 950 gatccaccgcagccggcagctcttgccgcaccgcagcaggcccgc 994
|||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 28790021 catccaccggaggcggcagctcttgccgcagcgcagcaggcccgc 28789977
Score = 95.6 bits (48), Expect = 5e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||||| || ||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 37926058 gggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatc 37925999
Query: 816 tcgttgtccgtccgccccgg 835
||||||||||||| ||||||
Sbjct: 37925998 tcgttgtccgtcctccccgg 37925979
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 914 gaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctctt 973
|||| |||| |||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct: 29126566 gaagctgccccgcttcaggtcggggcgcaggtagttgatccaccgcagcctgcagctctt 29126625
Query: 974 gccgcacc 981
||||||||
Sbjct: 29126626 gccgcacc 29126633
Score = 91.7 bits (46), Expect = 8e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 930 aggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcagg 989
||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 11348879 aggtcggcccggaggtagttgatccaccgaagcctgcagctcttgccgcagcgcagcagg 11348820
Query: 990 cc 991
||
Sbjct: 11348819 cc 11348818
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
|||| |||||||||||||||||||||||||||||| |||||||| | || | |||||||
Sbjct: 28790272 tgcgagttccagtagttcttgatctcgttgtccgtgcgccccggcaacctcccggcgatc 28790213
Query: 852 agcgaccac 860
|||||||||
Sbjct: 28790212 agcgaccac 28790204
Score = 81.8 bits (41), Expect = 7e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3532086 gccgcgcttgaggtcggggcggaggtagttcatccaccggaggcggcagctcttgccgca 3532027
Query: 980 ccgcagcag 988
||| ||||
Sbjct: 3532026 gcgctgcag 3532018
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 932 gtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 4917799 gtcggggcggaggtagttgagccaccgcagcctgcagctcttgccgcacc 4917848
Score = 67.9 bits (34), Expect = 1e-008
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtccgccc 832
||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 11354078 gtgcgagttccagtagttcttgatctcattgtccgtccgccc 11354037
Score = 65.9 bits (33), Expect = 4e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||||||||||||||||||||||||| ||||||
Sbjct: 1549318 tccagtagttcttgatctcgttgtccgtcctccccgg 1549354
Score = 63.9 bits (32), Expect = 2e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 30110986 cggaggtagttgagccaccggaggcggcagctcttgccgcaccg 30110943
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgg 835
|||||||| |||||||||||||||||||||||| ||||||
Sbjct: 29126327 tgttccagaagttcttgatctcgttgtccgtcctccccgg 29126366
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtccgtccgccccgg 835
||||||||||||||||||||||||||||| ||||||
Sbjct: 10933414 ccagtagttcttgatctcgttgtccgtcctccccgg 10933379
Score = 61.9 bits (31), Expect = 7e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 29463284 cttcaggtcaggcctcaggtagttgatccacctcagcctgcagctcttgcc 29463234
Score = 61.9 bits (31), Expect = 7e-007
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 798 ttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||||||||||
Sbjct: 3520244 ttccagtagttcttgatctcgttgtccgtcc 3520274
Score = 60.0 bits (30), Expect = 3e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 797 gttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgat 850
||||||| ||||||||||||||||||||| || |||||| |||| ||| |||||
Sbjct: 3532317 gttccagaagttcttgatctcgttgtccgacctccccggcagcctcgccgcgat 3532264
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtc 827
|||| |||||||||||||||| |||||||||||||||
Sbjct: 30115438 gtgcatgttccagtagttcttaatctcgttgtccgtc 30115402
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagc 839
||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 30111238 gtgttccagtagttcttgacgtcgttgtccgtccggccggggagc 30111194
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 797 gttccagtagttcttgatctcgttgtccgtccg 829
||||||| |||||||||||||||||||||||||
Sbjct: 20237739 gttccagaagttcttgatctcgttgtccgtccg 20237771
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 939 cggaggtagttgatccaccgcagccggcagctcttgccgcaccg 982
||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 28243682 cggaggtagttgagccaccgcagcctacagctcttcccgcaccg 28243639
Score = 56.0 bits (28), Expect = 4e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgggag 838
||||||||||||||||||||||||| ||||| || |||||
Sbjct: 25586875 tccagtagttcttgatctcgttgtcggtccggccggggag 25586836
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 911 ggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagct 970
|||||||| |||||| || |||||| ||||||||||||| |||||| || ||||||||
Sbjct: 10933303 ggtgaagtcgccgcggcgcacgtcggggcggaggtagttgagccaccggaggcggcagct 10933244
Query: 971 ctt 973
|||
Sbjct: 10933243 ctt 10933241
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
||||||||| |||| |||||||| ||||||| ||||| ||||||||||||
Sbjct: 3520582 cttcaggtcaggcctcaggtagttcatccacctcagcctgcagctcttgcc 3520632
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 800 ccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||
Sbjct: 43089501 ccagtagttcttgatctcgttgtc 43089478
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 663 tctgctgctgctgcggcggcggcg 686
||||||||||||||||||||||||
Sbjct: 39204894 tctgctgctgctgcggcggcggcg 39204871
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 37926320 gaggtcgaggttgaggtcggggca 37926297
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 942 aggtagttgatccaccgcagccggcagctctt 973
|||||||||| ||||||||||| |||||||||
Sbjct: 25586732 aggtagttgagccaccgcagcctgcagctctt 25586701
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 42404226 ctgctgctgctgcggcggcggcg 42404204
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 494 gccgtggccgtggccgcggccgc 516
|||||||||||||||||||||||
Sbjct: 32900590 gccgtggccgtggccgcggccgc 32900568
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 494 gccgtggccgtggccgcggccgc 516
|||||||||||||||||||||||
Sbjct: 32894238 gccgtggccgtggccgcggccgc 32894216
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 6978931 ctgctgctgctgcggcggcggcg 6978909
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 4590021 ctgctgctgctgcggcggcggcg 4589999
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 748525 ctgctgctgctgcggcggcggcg 748503
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 36691906 ctgctgctgctgcggcggcggc 36691885
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 953 ccaccgcagccggcagctcttgccgcaccg 982
|||||| || ||||||||||||||||||||
Sbjct: 34502922 ccaccggaggcggcagctcttgccgcaccg 34502893
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggc 685
||||||||||||||||||||||
Sbjct: 29126260 ctgctgctgctgcggcggcggc 29126239
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||| |||||||| |||||||||||||
Sbjct: 4917586 gtgttccagtggttcttgacgtcgttgtccgtcc 4917619
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 658 cggcttctgctgctgctgcggcggcggcgc 687
||||| |||||||||| |||||||||||||
Sbjct: 4590024 cggctgctgctgctgcggcggcggcggcgc 4589995
>gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone CL026180.5 R2R3-MYB gene
region
Length = 24910
Score = 246 bits (124), Expect = 2e-062
Identities = 211/240 (87%)
Strand = Plus / Minus
Query: 882 agcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccgg 941
||||||| |||||| ||||| |||||| ||||||||||||||||||| |||||||| |||
Sbjct: 20814 agcttgatgatgagctcgtcgtcgtcgtcggtgaagttgccgcgcttgaggtcggggcgg 20755
Query: 942 aggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggcccgccgccttg 1001
|||||||| ||||| || || ||||||||||||||||| || || || ||||||||||||
Sbjct: 20754 aggtagttcatccagcggaggcggcagctcttgccgcagcggaggagccccgccgccttg 20695
Query: 1002 ggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgctcgtcc 1061
||||||||||||||||| || ||||||||||| ||||||||| | ||| |||| ||||
Sbjct: 20694 ggcagcgaccgccagcaaccctcgccgtgcgccttgatgtaggcgatcagccgctggtcc 20635
Query: 1062 tcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgaccgcccc 1121
|||||||| |||||||| ||| |||| |||||||||||||||||||| ||||||| ||||
Sbjct: 20634 tcctccttcgtccacgcccccttgttcgtgtgcgccttctcgcagcatggcgacctcccc 20575
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 757 ggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatct 816
|||||||||||| || ||| ||||| ||| || ||||||||||||||||||||||||||
Sbjct: 21021 ggtcgatgccccggctcaggagcttgcgcttgatgtgcgtgttccagtagttcttgatct 20962
Query: 817 cgttgtccgtccgccccgg 835
|||||||||||| ||||||
Sbjct: 20961 cgttgtccgtcctccccgg 20943
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 608 gaggtcgaggttgaggtcggggca 631
||||||||||||||||||||||||
Sbjct: 21282 gaggtcgaggttgaggtcggggca 21259
>gb|AU070855.2|AU070855 AU070855 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10372_1A, mRNA sequence
Length = 371
Score = 230 bits (116), Expect = 1e-057
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 890 gatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggaggtagtt 949
|||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||||
Sbjct: 360 gatgagctcgtcctcgtcgtcggtgaagttgccgcgcttgaggtcggggcggaggtagtt 301
Query: 950 gatccaccgcagccggcagctcttgccgcaccgcagcaggcccgccgccttgggcagcga 1009
|||||||| || ||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 300 catccaccggaggcggcagctcttgccgcagcgaaggaggcccgccgccttgggcagcga 241
Query: 1010 ccgccagcacccttcgccgtgcgcgcggatgtaggccaccaggcgctcgtcctcctcctt 1069
|||||||| | |||||| ||||| | |||||| || | || || | ||||||||||||
Sbjct: 240 gcgccagcagcnttcgccatgcgccctgatgtacgcgatgagccgntggtcctcctcctt 181
Query: 1070 ggtccacgcgcccctgttggtgtgcgccttctcgcagcagggcgac 1115
|||||||| ||| |||| |||||||||||||||||||| ||||||
Sbjct: 180 cgtccacgcccccttgttcgtgtgcgccttctcgcagcacggcgac 135
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0229B10
Length = 114509
Score = 200 bits (101), Expect = 1e-048
Identities = 212/249 (85%)
Strand = Plus / Plus
Query: 873 aggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcagg 932
|||||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||
Sbjct: 81226 aggctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgagg 81285
Query: 933 tcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggccc 992
|| ||||||||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 81286 tcaggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccg 81345
Query: 993 gccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccagg 1052
|| |||||||||||||| |||||||| |||||||||||||| ||||||||| | ||
Sbjct: 81346 gcggccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagc 81405
Query: 1053 cgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggc 1112
|| || || |||||||||||||| || ||| |||||||||| |||||||||||||| ||
Sbjct: 81406 cggtcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggt 81465
Query: 1113 gaccgcccc 1121
|||| ||||
Sbjct: 81466 gacctcccc 81474
Score = 93.7 bits (47), Expect = 2e-016
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 80952 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 81011
Query: 816 tcgttgtccgt 826
|||||||||||
Sbjct: 81012 tcgttgtccgt 81022
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 80728 ggctgatgcagaggtccagattgaggtcagggca 80761
>gb|AACV01020458.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020458, whole
genome shotgun sequence
Length = 77073
Score = 200 bits (101), Expect = 1e-048
Identities = 212/249 (85%)
Strand = Plus / Plus
Query: 873 aggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcagg 932
|||||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||
Sbjct: 70857 aggctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgagg 70916
Query: 933 tcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggccc 992
|| ||||||||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 70917 tcaggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccg 70976
Query: 993 gccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccagg 1052
|| |||||||||||||| |||||||| |||||||||||||| ||||||||| | ||
Sbjct: 70977 gcggccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagc 71036
Query: 1053 cgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggc 1112
|| || || |||||||||||||| || ||| |||||||||| |||||||||||||| ||
Sbjct: 71037 cggtcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggt 71096
Query: 1113 gaccgcccc 1121
|||| ||||
Sbjct: 71097 gacctcccc 71105
Score = 93.7 bits (47), Expect = 2e-016
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 70583 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 70642
Query: 816 tcgttgtccgt 826
|||||||||||
Sbjct: 70643 tcgttgtccgt 70653
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 70359 ggctgatgcagaggtccagattgaggtcagggca 70392
>ref|NT_107077.1| Oryza sativa (japonica cultivar-group)
Length = 1516644
Score = 200 bits (101), Expect = 1e-048
Identities = 212/249 (85%)
Strand = Plus / Plus
Query: 873 aggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcagg 932
|||||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||
Sbjct: 782500 aggctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgagg 782559
Query: 933 tcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggccc 992
|| ||||||||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 782560 tcaggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccg 782619
Query: 993 gccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccagg 1052
|| |||||||||||||| |||||||| |||||||||||||| ||||||||| | ||
Sbjct: 782620 gcggccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagc 782679
Query: 1053 cgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggc 1112
|| || || |||||||||||||| || ||| |||||||||| |||||||||||||| ||
Sbjct: 782680 cggtcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggt 782739
Query: 1113 gaccgcccc 1121
|||| ||||
Sbjct: 782740 gacctcccc 782748
Score = 93.7 bits (47), Expect = 2e-016
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 782226 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 782285
Query: 816 tcgttgtccgt 826
|||||||||||
Sbjct: 782286 tcgttgtccgt 782296
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| ||||||| || |||||||||||||||||
Sbjct: 511526 gccgcgcttgaggtcggggcggaggtagtttgtccaccggaggcggcagctcttgccgca 511585
Query: 980 ccgcagcag 988
|| |||||
Sbjct: 511586 gcggagcag 511594
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||| |||||||||||||||||||||||
Sbjct: 508468 gtgcgtgttccagtggttcttgatctcgttgtccgtcc 508505
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 782002 ggctgatgcagaggtccagattgaggtcagggca 782035
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 200 bits (101), Expect = 1e-048
Identities = 212/249 (85%)
Strand = Plus / Plus
Query: 873 aggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcagg 932
|||||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||
Sbjct: 10344743 aggctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgagg 10344802
Query: 933 tcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggccc 992
|| ||||||||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 10344803 tcaggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccg 10344862
Query: 993 gccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccagg 1052
|| |||||||||||||| |||||||| |||||||||||||| ||||||||| | ||
Sbjct: 10344863 gcggccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagc 10344922
Query: 1053 cgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggc 1112
|| || || |||||||||||||| || ||| |||||||||| |||||||||||||| ||
Sbjct: 10344923 cggtcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggt 10344982
Query: 1113 gaccgcccc 1121
|||| ||||
Sbjct: 10344983 gacctcccc 10344991
Score = 93.7 bits (47), Expect = 2e-016
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 10344469 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 10344528
Query: 816 tcgttgtccgt 826
|||||||||||
Sbjct: 10344529 tcgttgtccgt 10344539
Score = 83.8 bits (42), Expect = 2e-013
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5020929 ggccggaggtagttgagccaccgcagccggcagctcttgccgcacc 5020974
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| ||||||| || |||||||||||||||||
Sbjct: 10099658 gccgcgcttgaggtcggggcggaggtagtttgtccaccggaggcggcagctcttgccgca 10099717
Query: 980 ccgcagcag 988
|| |||||
Sbjct: 10099718 gcggagcag 10099726
Score = 71.9 bits (36), Expect = 7e-010
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 924 cgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgc 983
||||||||||| |||||||||||||| ||||||| |||||||||||||| || |||||
Sbjct: 3369297 cgcttcaggtccggccggaggtagttcgtccaccggagccggcagctcttcccacaccgg 3369238
Query: 984 agca 987
||||
Sbjct: 3369237 agca 3369234
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||| |||||||||||||||||||||||
Sbjct: 10096600 gtgcgtgttccagtggttcttgatctcgttgtccgtcc 10096637
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||| |||||||||||||
Sbjct: 4071729 gtgcgtgttccagtagttcttgatgtcgttgtccgtcc 4071692
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||| |||||||||||||||||||||||
Sbjct: 3369506 gtgcgtgttccagtggttcttgatctcgttgtccgtcc 3369469
Score = 50.1 bits (25), Expect = 0.003
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgca 984
|||| ||||||||| ||||||| |||||||||||||||| ||| ||||
Sbjct: 4071498 ggcctgaggtagttcgtccaccggagccggcagctcttgctgcaacgca 4071450
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 5605270 ctgctgctgctgcggcggcggcg 5605248
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 10344245 ggctgatgcagaggtccagattgaggtcagggca 10344278
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 200 bits (101), Expect = 1e-048
Identities = 212/249 (85%)
Strand = Plus / Plus
Query: 873 aggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcagg 932
|||||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||
Sbjct: 19818554 aggctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgagg 19818613
Query: 933 tcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggccc 992
|| ||||||||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 19818614 tcaggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccg 19818673
Query: 993 gccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccagg 1052
|| |||||||||||||| |||||||| |||||||||||||| ||||||||| | ||
Sbjct: 19818674 gcggccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagc 19818733
Query: 1053 cgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggc 1112
|| || || |||||||||||||| || ||| |||||||||| |||||||||||||| ||
Sbjct: 19818734 cggtcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggt 19818793
Query: 1113 gaccgcccc 1121
|||| ||||
Sbjct: 19818794 gacctcccc 19818802
Score = 93.7 bits (47), Expect = 2e-016
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 19818280 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 19818339
Query: 816 tcgttgtccgt 826
|||||||||||
Sbjct: 19818340 tcgttgtccgt 19818350
Score = 83.8 bits (42), Expect = 2e-013
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 14494740 ggccggaggtagttgagccaccgcagccggcagctcttgccgcacc 14494785
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| ||||||| || |||||||||||||||||
Sbjct: 19573469 gccgcgcttgaggtcggggcggaggtagtttgtccaccggaggcggcagctcttgccgca 19573528
Query: 980 ccgcagcag 988
|| |||||
Sbjct: 19573529 gcggagcag 19573537
Score = 71.9 bits (36), Expect = 7e-010
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 924 cgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgc 983
||||||||||| |||||||||||||| ||||||| |||||||||||||| || |||||
Sbjct: 12843108 cgcttcaggtccggccggaggtagttcgtccaccggagccggcagctcttcccacaccgg 12843049
Query: 984 agca 987
||||
Sbjct: 12843048 agca 12843045
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||| |||||||||||||||||||||||
Sbjct: 19570411 gtgcgtgttccagtggttcttgatctcgttgtccgtcc 19570448
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||| |||||||||||||
Sbjct: 13545540 gtgcgtgttccagtagttcttgatgtcgttgtccgtcc 13545503
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||| |||||||||||||||||||||||
Sbjct: 12843317 gtgcgtgttccagtggttcttgatctcgttgtccgtcc 12843280
Score = 50.1 bits (25), Expect = 0.003
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgca 984
|||| ||||||||| ||||||| |||||||||||||||| ||| ||||
Sbjct: 13545309 ggcctgaggtagttcgtccaccggagccggcagctcttgctgcaacgca 13545261
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 15079081 ctgctgctgctgcggcggcggcg 15079059
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 19818056 ggctgatgcagaggtccagattgaggtcagggca 19818089
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 200 bits (101), Expect = 1e-048
Identities = 212/249 (85%)
Strand = Plus / Plus
Query: 873 aggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcagg 932
|||||||| ||||||| ||| || || ||||| || ||||||||||||||||||| |||
Sbjct: 20889000 aggctgtgaagcttgatgatcagctcatcctcctcctcggtgaagttgccgcgcttgagg 20889059
Query: 933 tcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcagcaggccc 992
|| ||||||||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 20889060 tcaggccggaggtagttgatccaccggaggcggcagctcttgccacagcggaggaggccg 20889119
Query: 993 gccgccttgggcagcgaccgccagcacccttcgccgtgcgcgcggatgtaggccaccagg 1052
|| |||||||||||||| |||||||| |||||||||||||| ||||||||| | ||
Sbjct: 20889120 gcggccttgggcagcgatcgccagcaaccttcgccgtgcgccttgatgtaggcaatgagc 20889179
Query: 1053 cgctcgtcctcctccttggtccacgcgcccctgttggtgtgcgccttctcgcagcagggc 1112
|| || || |||||||||||||| || ||| |||||||||| |||||||||||||| ||
Sbjct: 20889180 cggtcatcttcctccttggtccatgctcccttgttggtgtgtgccttctcgcagcacggt 20889239
Query: 1113 gaccgcccc 1121
|||| ||||
Sbjct: 20889240 gacctcccc 20889248
Score = 93.7 bits (47), Expect = 2e-016
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 756 gggtcgatgcccctgcccagcagcttccgccggacgtgcgtgttccagtagttcttgatc 815
||||||||||| | || ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 20888726 gggtcgatgccacggctcagcagcttcctcctgatgtgcgtgttccagtagttcttgatc 20888785
Query: 816 tcgttgtccgt 826
|||||||||||
Sbjct: 20888786 tcgttgtccgt 20888796
Score = 83.8 bits (42), Expect = 2e-013
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcacc 981
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 15717884 ggccggaggtagttgagccaccgcagccggcagctcttgccgcacc 15717929
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 920 gccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgca 979
||||||||| |||||||| ||||||||||| ||||||| || |||||||||||||||||
Sbjct: 20618026 gccgcgcttgaggtcggggcggaggtagtttgtccaccggaggcggcagctcttgccgca 20618085
Query: 980 ccgcagcag 988
|| |||||
Sbjct: 20618086 gcggagcag 20618094
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 796 tgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||||||||||| ||||||||||||| |||||| ||| |||| ||||||
Sbjct: 15717635 tgttccagtagttcttgatgtcgttgtccgtcctccccggcagctgcgccgcgatg 15717690
Score = 71.9 bits (36), Expect = 7e-010
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 924 cgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgc 983
||||||||||| |||||||||||||| ||||||| |||||||||||||| || |||||
Sbjct: 13975222 cgcttcaggtccggccggaggtagttcgtccaccggagccggcagctcttcccacaccgg 13975163
Query: 984 agca 987
||||
Sbjct: 13975162 agca 13975159
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||| |||||||||||||||||||||||
Sbjct: 20614968 gtgcgtgttccagtggttcttgatctcgttgtccgtcc 20615005
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||||||||||||| |||||||||||||
Sbjct: 14721300 gtgcgtgttccagtagttcttgatgtcgttgtccgtcc 14721263
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 791 gtgcgtgttccagtagttcttgatctcgttgtccgtcc 828
|||||||||||||| |||||||||||||||||||||||
Sbjct: 13975431 gtgcgtgttccagtggttcttgatctcgttgtccgtcc 13975394
Score = 50.1 bits (25), Expect = 0.003
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgca 984
|||| ||||||||| ||||||| |||||||||||||||| ||| ||||
Sbjct: 14721069 ggcctgaggtagttcgtccaccggagccggcagctcttgctgcaacgca 14721021
Score = 46.1 bits (23), Expect = 0.041
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 664 ctgctgctgctgcggcggcggcg 686
|||||||||||||||||||||||
Sbjct: 16292534 ctgctgctgctgcggcggcggcg 16292512
Score = 44.1 bits (22), Expect = 0.16
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 598 ggctgatgcagaggtcgaggttgaggtcggggca 631
|||||||||||||||| || |||||||| |||||
Sbjct: 20888502 ggctgatgcagaggtccagattgaggtcagggca 20888535
>dbj|AK111720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030I19, full
insert sequence
Length = 1665
Score = 194 bits (98), Expect = 7e-047
Identities = 161/182 (88%)
Strand = Plus / Minus
Query: 806 gttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagcgaccacttgtt 865
||||||||||||||||||||||| ||| || || | || ||||| |||||||||||
Sbjct: 494 gttcttgatctcgttgtccgtcctcccgggcaggcacgacgcgatcttggaccacttgtt 435
Query: 866 cccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcg 925
|||||| |||| ||||||||||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 434 cccgagtaggccgtgcagcttgatgatggtgtcctcctcgtcggcggtgaagttgccgcg 375
Query: 926 cttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgccgcaccgcag 985
|||||||||||| || ||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 374 cttcaggtcggggcgcaggtagttgatccaccggaggcggcagctcttgccgcaccgcag 315
Query: 986 ca 987
||
Sbjct: 314 ca 313
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,997,284
Number of Sequences: 438736
Number of extensions: 2997284
Number of successful extensions: 60514
Number of sequences better than 0.5: 899
Number of HSP's better than 0.5 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 35237
Number of HSP's gapped (non-prelim): 24901
length of query: 1121
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1100
effective length of database: 2,791,206,460
effective search space: 3070327106000
effective search space used: 3070327106000
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)