BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2763196.2.1
(2766 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_478651.1| Oryza sativa (japonica cultivar-group), mRNA 1215 0.0
dbj|AK102758.1| Oryza sativa (japonica cultivar-group) cDNA... 1185 0.0
gb|CB641434.1|CB641434 OSJNEb01B04.r OSJNEb Oryza sativa (j... 317 2e-083
dbj|AP005126.3| Oryza sativa (japonica cultivar-group) geno... 291 1e-075
gb|AACV01016535.1| Oryza sativa (japonica cultivar-group) c... 291 1e-075
dbj|AP004401.5| Oryza sativa (japonica cultivar-group) geno... 291 1e-075
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 291 1e-075
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 291 1e-075
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 291 1e-075
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 291 1e-075
gb|CA999435.1|CA999435 S234H_D07 Rice cold stress germinati... 276 6e-071
gb|CB641433.1|CB641433 OSJNEb01B04.f OSJNEb Oryza sativa (j... 258 1e-065
gb|AACV01016536.1| Oryza sativa (japonica cultivar-group) c... 258 1e-065
gb|CX727994.1|CX727994 OSJNEb15O24.r OSJNEb Oryza sativa (j... 250 4e-063
gb|CB658280.1|CB658280 OSJNEc14D08.f OSJNEc Oryza sativa (j... 208 1e-050
gb|AQ688854.1|AQ688854 nbxb0078O06f CUGI Rice BAC Library O... 127 3e-026
gb|AQ157243.1|AQ157243 nbxb0009K23f CUGI Rice BAC Library O... 123 5e-025
dbj|AK101616.1| Oryza sativa (japonica cultivar-group) cDNA... 90 8e-015
ref|XM_478649.1| Oryza sativa (japonica cultivar-group), mRNA 90 8e-015
dbj|AG209581.1| Oryza sativa (japonica cultivar-group) DNA,... 80 7e-012
dbj|AG210536.1| Oryza sativa (japonica cultivar-group) DNA,... 80 7e-012
dbj|AB155093.1| Oryza sativa (japonica cultivar-group) DNA,... 80 7e-012
gb|AACV01020509.1| Oryza sativa (japonica cultivar-group) c... 80 7e-012
dbj|AP005679.2| Oryza sativa (japonica cultivar-group) geno... 80 7e-012
dbj|AP005742.3| Oryza sativa (japonica cultivar-group) geno... 80 7e-012
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 80 7e-012
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 80 7e-012
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 80 7e-012
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 80 7e-012
dbj|AG210537.1| Oryza sativa (japonica cultivar-group) DNA,... 78 3e-011
gb|AQ869810.1|AQ869810 nbeb0036C13f CUGI Rice BAC Library (... 76 1e-010
dbj|AK119388.1| Oryza sativa (japonica cultivar-group) cDNA... 76 1e-010
gb|AACV01010532.1| Oryza sativa (japonica cultivar-group) c... 76 1e-010
ref|NT_107200.1| Oryza sativa (japonica cultivar-group) 76 1e-010
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 76 1e-010
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 76 1e-010
emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromoso... 76 1e-010
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 76 1e-010
gb|AACV01010533.1| Oryza sativa (japonica cultivar-group) c... 70 7e-009
ref|XM_474009.1| Oryza sativa (japonica cultivar-group), p... 70 7e-009
emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromoso... 70 7e-009
dbj|AG207794.1| Oryza sativa (japonica cultivar-group) DNA,... 64 4e-007
gb|AACV01020515.1| Oryza sativa (japonica cultivar-group) c... 64 4e-007
ref|XM_474011.1| Oryza sativa (japonica cultivar-group), p... 64 4e-007
gb|AZ133063.1|AZ133063 OSJNBb0108M18f CUGI Rice BAC Library... 62 2e-006
gb|AC137596.2| Oryza sativa (japonica cultivar-group) chrom... 60 7e-006
gb|AACV01020518.1| Oryza sativa (japonica cultivar-group) c... 60 7e-006
ref|XM_474012.1| Oryza sativa (japonica cultivar-group), p... 60 7e-006
dbj|AK111564.1| Oryza sativa (japonica cultivar-group) cDNA... 58 3e-005
gb|AACV01016835.1| Oryza sativa (japonica cultivar-group) c... 58 3e-005
ref|NM_193060.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-005
dbj|AP004260.2| Oryza sativa (japonica cultivar-group) geno... 58 3e-005
dbj|AP004306.3| Oryza sativa (japonica cultivar-group) geno... 58 3e-005
dbj|AK066826.1| Oryza sativa (japonica cultivar-group) cDNA... 56 1e-004
emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC O... 56 1e-004
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 56 1e-004
gb|AACV01020517.1| Oryza sativa (japonica cultivar-group) c... 56 1e-004
gb|AACV01025511.1| Oryza sativa (japonica cultivar-group) c... 56 1e-004
ref|XM_474008.1| Oryza sativa (japonica cultivar-group), p... 56 1e-004
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 56 1e-004
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 56 1e-004
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 56 1e-004
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 56 1e-004
gb|AZ128801.1|AZ128801 OSJNBb0101N22r CUGI Rice BAC Library... 54 4e-004
dbj|AG021764.1| Oryza sativa (japonica cultivar-group) DNA,... 54 4e-004
gb|CA999502.1|CA999502 S345O_C08 Rice cold stress germinati... 54 4e-004
gb|CB000018.1|CB000018 S345V_E06 Rice cold stress germinati... 54 4e-004
gb|CF195836.1|CF195836 Azbi1.5_E03 AZ-BI Oryza sativa (japo... 54 4e-004
dbj|AK060565.1| Oryza sativa (japonica cultivar-group) cDNA... 54 4e-004
dbj|AK111594.1| Oryza sativa (japonica cultivar-group) cDNA... 54 4e-004
dbj|AK119282.1| Oryza sativa (japonica cultivar-group) cDNA... 54 4e-004
dbj|AP003811.2| Oryza sativa (japonica cultivar-group) geno... 54 4e-004
gb|AACV01016456.1| Oryza sativa (japonica cultivar-group) c... 54 4e-004
ref|XM_474971.1| Oryza sativa (japonica cultivar-group), p... 54 4e-004
ref|XM_478541.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-004
ref|XM_479226.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-004
dbj|AP006753.2| Oryza sativa (japonica cultivar-group) geno... 54 4e-004
gb|AQ575594.1|AQ575594 nbxb0087H19f CUGI Rice BAC Library O... 52 0.002
dbj|AG213557.1| Oryza sativa (japonica cultivar-group) DNA,... 52 0.002
dbj|AK066162.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.002
dbj|AK066883.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.002
dbj|AK070254.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.002
dbj|AP004274.5| Oryza sativa (japonica cultivar-group) geno... 52 0.002
dbj|AP004570.5| Oryza sativa (japonica cultivar-group) geno... 52 0.002
gb|AACV01002580.1| Oryza sativa (japonica cultivar-group) c... 52 0.002
gb|AACV01020508.1| Oryza sativa (japonica cultivar-group) c... 52 0.002
gb|AACV01020514.1| Oryza sativa (japonica cultivar-group) c... 52 0.002
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 52 0.002
ref|NM_186103.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
ref|NM_191096.1| Oryza sativa (japonica cultivar-group), p... 52 0.002
ref|NM_184946.2| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
ref|XM_474005.1| Oryza sativa (japonica cultivar-group), p... 52 0.002
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 52 0.002
dbj|AP003255.3| Oryza sativa (japonica cultivar-group) geno... 52 0.002
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.002
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.002
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 52 0.002
gb|AQ328767.1|AQ328767 nbxb0043F16f CUGI Rice BAC Library O... 50 0.007
gb|AQ688463.1|AQ688463 nbxb0077B02r CUGI Rice BAC Library O... 50 0.007
gb|AZ128156.1|AZ128156 OSJNBb0086P01f CUGI Rice BAC Library... 50 0.007
gb|AY327041.1| Oryza sativa (japonica cultivar-group) recep... 50 0.007
dbj|AK065352.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.007
dbj|AK110116.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.007
gb|AC091233.8| Oryza sativa chromosome 3 BAC OSJNBa0053G10 ... 50 0.007
dbj|AP004590.3| Oryza sativa (japonica cultivar-group) geno... 50 0.007
dbj|AP003406.3| Oryza sativa (japonica cultivar-group) geno... 50 0.007
gb|AC130597.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
gb|AACV01002464.1| Oryza sativa (japonica cultivar-group) c... 50 0.007
gb|AACV01002465.1| Oryza sativa (japonica cultivar-group) c... 50 0.007
gb|AACV01007078.1| Oryza sativa (japonica cultivar-group) c... 50 0.007
gb|AACV01012501.1| Oryza sativa (japonica cultivar-group) c... 50 0.007
gb|AACV01017416.1| Oryza sativa (japonica cultivar-group) c... 50 0.007
ref|NM_191518.1| Oryza sativa (japonica cultivar-group), p... 50 0.007
ref|NM_191520.1| Oryza sativa (japonica cultivar-group), p... 50 0.007
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 50 0.007
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 50 0.007
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 50 0.007
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 50 0.007
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 50 0.007
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 50 0.007
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.007
gb|AQ328208.1|AQ328208 nbxb0042L19f CUGI Rice BAC Library O... 48 0.026
dbj|AB157430.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.026
gb|CB653234.1|CB653234 OSJNEc04B06.f OSJNEc Oryza sativa (j... 48 0.026
gb|CB661005.1|CB661005 OSJNEd03F05.f OSJNEd Oryza sativa (j... 48 0.026
dbj|AP003751.1| Oryza sativa (japonica cultivar-group) chro... 48 0.026
dbj|AK102249.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.026
dbj|AK103518.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.026
dbj|AK109699.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.026
dbj|AK110461.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.026
gb|AC135205.4| Oryza sativa (japonica cultivar-group) chrom... 48 0.026
gb|AACV01006277.1| Oryza sativa (japonica cultivar-group) c... 48 0.026
gb|AACV01016464.1| Oryza sativa (japonica cultivar-group) c... 48 0.026
gb|AACV01016475.1| Oryza sativa (japonica cultivar-group) c... 48 0.026
ref|NM_187446.1| Oryza sativa (japonica cultivar-group), p... 48 0.026
ref|XM_478554.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.026
ref|XM_478599.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.026
ref|XM_506393.1| PREDICTED Oryza sativa (japonica cultivar-... 48 0.026
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 48 0.026
dbj|AP003863.3| Oryza sativa (japonica cultivar-group) geno... 48 0.026
dbj|AP005810.4| Oryza sativa (japonica cultivar-group) geno... 48 0.026
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.026
dbj|AK072314.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.10
dbj|AK100413.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.10
dbj|AK102358.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.10
gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, ... 46 0.10
gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbar... 46 0.10
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 ... 46 0.10
gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbar... 46 0.10
dbj|AP005287.3| Oryza sativa (japonica cultivar-group) geno... 46 0.10
gb|AACV01005473.1| Oryza sativa (japonica cultivar-group) c... 46 0.10
gb|AACV01008184.1| Oryza sativa (japonica cultivar-group) c... 46 0.10
gb|AACV01008326.1| Oryza sativa (japonica cultivar-group) c... 46 0.10
gb|AACV01021506.1| Oryza sativa (japonica cultivar-group) c... 46 0.10
ref|NM_185160.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
ref|NM_196411.1| Oryza sativa (japonica cultivar-group) put... 46 0.10
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 46 0.10
ref|XM_467969.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 46 0.10
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 46 0.10
ref|NT_107205.1| Oryza sativa (japonica cultivar-group) 46 0.10
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.10
gb|CH401180.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.10
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.10
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.10
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.10
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.10
emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromoso... 46 0.10
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 46 0.10
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 46 0.10
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.10
gb|AQ858018.1|AQ858018 nbeb0011J01r CUGI Rice BAC Library (... 44 0.40
gb|AQ916830.1|AQ916830 nbeb0067E22r CUGI Rice BAC Library (... 44 0.40
gb|CB649028.1|CB649028 OSJNEb12L18.f OSJNEb Oryza sativa (j... 44 0.40
gb|CB670838.1|CB670838 OSJNEe04B24.r OSJNEe Oryza sativa (j... 44 0.40
dbj|AK100849.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.40
dbj|AK110861.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.40
dbj|AP005807.3| Oryza sativa (japonica cultivar-group) geno... 44 0.40
gb|AC091234.7| Oryza sativa chromosome 3 BAC OSJNBa0057E11 ... 44 0.40
gb|AACV01009819.1| Oryza sativa (japonica cultivar-group) c... 44 0.40
gb|AACV01016469.1| Oryza sativa (japonica cultivar-group) c... 44 0.40
gb|AACV01016534.1| Oryza sativa (japonica cultivar-group) c... 44 0.40
gb|AACV01016730.1| Oryza sativa (japonica cultivar-group) c... 44 0.40
gb|AACV01020511.1| Oryza sativa (japonica cultivar-group) c... 44 0.40
ref|NM_185887.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
ref|XM_472589.1| Oryza sativa (japonica cultivar-group), p... 44 0.40
ref|XM_478549.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
ref|XM_478647.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
ref|NT_079861.2| Oryza sativa (japonica cultivar-group) 44 0.40
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.40
emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromoso... 44 0.40
>ref|XM_478651.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2902
Score = 1215 bits (613), Expect = 0.0
Identities = 1417/1685 (84%)
Strand = Plus / Minus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 2611 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 2552
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 2551 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 2492
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 2491 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 2432
Query: 493 tccgcagcattgtcttcgttccattgccgccacgcatatccagcgatgttcaaggagtcc 552
||| | | |||||||| |||||||| ||||| ||| |||| || ||||| | ||||||
Sbjct: 2431 tcctcgcccttgtcttcattccattgtcgccatgcaaatcctgcaatgtttagggagtct 2372
Query: 553 tcgtgacagtggaagctcacagccctctttcctgtgatgatctccaagatcaggactccg 612
| |||| || ||||||| ||||||||||||||||||||||||||| || || |||||
Sbjct: 2371 tgttgaccatgaaagctcaaagccctctttcctgtgatgatctccaacattagaactcca 2312
Query: 613 aagccatagacgtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatg 672
|||| ||| | || ||||| ||||| |||||||||||||| || ||||| || |||||
Sbjct: 2311 aagctataaatatcggactttactgagaaaatgccttccatagcatattccggcgacata 2252
Query: 673 tagccaaatgtaccgacgacccgattcgtgttgaattggttttggtcccctccaaacatc 732
||||||||||| || || || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2251 tagccaaatgttccaaccacacgattcgtgttgaattggttttgatcccctccaaacatc 2192
Query: 733 cttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctg 792
|| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 2191 ctggccattccaaaatctgaaatcttggggttcatgtctttgtccaggagaatgttgctg 2132
Query: 793 gccttgagatcacggtgaacaactcgcagcctcgaatcccggtggagatatagcagccct 852
|||||||||||||| ||||||||||||| ||| || |||||||||||||||| |||||||
Sbjct: 2131 gccttgagatcacgatgaacaactcgcaaccttgagtcccggtggagatataacagccct 2072
Query: 853 ctagcaatgccttcgattatatcaaaccgtttcttccagtctagaagccgttgcttttca 912
| |||||| ||||| |||||||||||||||||| |||||||||| |||| |||||| |||
Sbjct: 2071 cgagcaatcccttcaattatatcaaaccgtttcctccagtctaggagcccttgcttctca 2012
Query: 913 ggattaaagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttc 972
||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 2011 ggattgaagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttc 1952
Query: 973 tcttccctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgca 1032
||||| | | |||||||||| |||| |||||| ||||||||||| ||||||| |||||
Sbjct: 1951 tcttctccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcg 1892
Query: 1033 ataagtatgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctc 1092
||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 1891 ataagtatgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctc 1832
Query: 1093 ttcacagctacttcttctcccccaggtaaagttcccatatagacaggaccaaatcctcct 1152
|| || ||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 1831 ttaacggctacttcttctcccccaggtaattttcccatatatacaggaccaaatcctcct 1772
Query: 1153 tctccaagcttgttagagtcactaaaattacttgtagcagttcttatacggtccagcgag 1212
||||||||||||| |||||||| ||||||| || |||| | |||| ||||| | |||
Sbjct: 1771 gctccaagcttgttggagtcactgaaattacaagtggcagcttttatccggtcaaaggag 1712
Query: 1213 tacactttgagttcatgactttttccatcctccacatcatcatcaaaacgaattgactgc 1272
|| ||||||||||||||||||||||||||||| || || |||||| |||| ||||||
Sbjct: 1711 tatactttgagttcatgactttttccatcctctgtgtcgtcttcaaaaggaatcgactgc 1652
Query: 1273 gagatgtccagcatagcactattctgctgggattgggtagacgaatgccttgatctccaa 1332
||||||||||||||| ||||||||||||| ||| | ||||||| |||| |||| ||||||
Sbjct: 1651 gagatgtccagcataccactattctgctgagatcgtgtagacgtatgcattgacctccaa 1592
Query: 1333 cttccgtgcactgcatctttaatatttctaccatgcttccaccacagaagaaggcaagca 1392
||| ||||| ||||||| ||||| || ||| ||||||||||||| | ||||||||
Sbjct: 1591 cttttgtgcatcacatctttgatattcctcccacgcttccaccacaggaagaggcaagct 1532
Query: 1393 gccaaaacaaataacactatggctgatattatcgtggctattttccaaattgggtgatgt 1452
||||||||||| ||| | || || | ||| |||||||||||||||| || ||||||
Sbjct: 1531 agcaaaacaaatagcaccactgcagacactattgtggctattttccaaactgcatgatgt 1472
Query: 1453 cctcgcaattcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactca 1512
|| || |||||||||||||| || |||||||| |||||| |||| | || ||||
Sbjct: 1471 gagcgtaactcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactgg 1412
Query: 1513 tgcatgtcaattagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataa 1572
| |||||| || || ||| ||||||| ||| || ||| |||||| |||| |||||
Sbjct: 1411 tacatgtcgatcaggtcgctaccccacagtagacatcctattgtagtcatgtagacatag 1352
Query: 1573 gcaccgcatgagcagttgttaaggcagacagttctgcatccaggctcatctcccactgta 1632
||||| |||||||||||| | ||||| || | |||||||| ||||||| ||| |||
Sbjct: 1351 gcaccacatgagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgta 1292
Query: 1633 gatacccaatatgagaaatcaggccactttatgtttcccattggaagaaatccatcccca 1692
||| ||| ||||||||||| |||||||| |||||| || | ||||||||||||||||
Sbjct: 1291 gatggccagtatgagaaatccggccacttgatgtttgggatagaaagaaatccatcccca 1232
Query: 1693 gactgattggtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcct 1752
| || || || |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 1231 gtttggttcacctgacaacccaaaggtgggctcctgacacaaccttgactccaatttccc 1172
Query: 1753 gcattccactgctcctgcaacttcggatgaaaaccttttaggcaggtgcattttgccttg 1812
||||||||| || ||||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 1171 atattccactgatcaagcaactttggctgaaatccttttaggcaggtacattttgccttg 1112
Query: 1813 ccatcttgcgatgcagtgcattttgcatttggaccacatgtagcatagtattcacactca 1872
||||||||| ||||||||||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 1111 ccatcttgcatggcagtgcatttagcatttgcgccacacgtagcatagtactcacactca 1052
Query: 1873 tttgatggttggtaccagacaagctcccaatcttgtgaagattttctaaccatgtagcag 1932
||||||||||| ||||||| |||||| ||||||| || || |||||||||| |||
Sbjct: 1051 tttgatggttgcatccagacagtctcccactcttgtgctgacttcttaaccatgtaacag 992
Query: 1933 atgtctgtgccatttggcaaaacaacaaacctctgcaaagaagtgtttgttgcagtgtat 1992
|||||||| |||||||||| |||||||||||| |||| ||| ||||||| |||||||||
Sbjct: 991 atgtctgtaccatttggcataacaacaaacctttgcagagatgtgtttgatgcagtgtaa 932
Query: 1993 gtgta 1997
|||||
Sbjct: 931 gtgta 927
Score = 268 bits (135), Expect = 1e-068
Identities = 264/307 (85%)
Strand = Plus / Minus
Query: 2047 agtggcctccatggaatgcctataaaattcaccccattccactgtcccgacctccagtac 2106
||||| ||||| |||||||| | ||||||| |||| |||| ||||| ||||||||
Sbjct: 877 agtggtctccaaggaatgcccacaaaattctgcccagtccattgtcctgacctccaaatg 818
Query: 2107 gtaacgttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagc 2166
|| || ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 817 gtgacattgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagc 758
Query: 2167 gcgtatcgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctcc 2226
||||| ||||||||||| |||||||||||||||| ||| |||||||| ||||| ||||
Sbjct: 757 gcgtaccgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcg 698
Query: 2227 ttagggcccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtc 2286
||||||||||| |||| ||| ||||||||||||||||||||| |||||||||| |
Sbjct: 697 gaggggcccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgac 638
Query: 2287 gggtgccagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtg 2346
|||||||||||||||||||| ||| || || ||||||||||||||||||||||| |||
Sbjct: 637 gggtgccagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtg 578
Query: 2347 tcctgga 2353
|||||||
Sbjct: 577 tcctgga 571
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Minus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 485 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 426
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 425 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 366
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 365 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 306
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 305 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 246
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 245 cgtatccgtc 236
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 2703 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 2644
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 2643 ttgatttgct 2634
>dbj|AK102758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C10, full
insert sequence
Length = 2906
Score = 1185 bits (598), Expect = 0.0
Identities = 1414/1685 (83%), Gaps = 2/1685 (0%)
Strand = Plus / Minus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 2606 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 2547
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 2546 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 2487
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 2486 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 2427
Query: 493 tccgcagcattgtcttcgttccattgccgccacgcatatccagcgatgttcaaggagtcc 552
||| | | |||||||| |||||||| ||||| ||| |||| || ||||| | ||||||
Sbjct: 2426 tcctcgcccttgtcttcattccattgtcgccatgcaaatcctgcaatgtttagggagtct 2367
Query: 553 tcgtgacagtggaagctcacagccctctttcctgtgatgatctccaagatcaggactccg 612
| |||| || ||||||| ||||||||||||||||||||||||||| || || |||||
Sbjct: 2366 tgttgaccatgaaagctcaaagccctctttcctgtgatgatctccaacattagaactcca 2307
Query: 613 aagccatagacgtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatg 672
|||| ||| | || ||||| ||||| |||||||||||||| || ||||| || |||||
Sbjct: 2306 aagctataaatatcggactttactgagaaaatgccttccatagcatattccggcgacata 2247
Query: 673 tagccaaatgtaccgacgacccgattcgtgttgaattggttttggtcccctccaaacatc 732
||||||||||| || || || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2246 tagccaaatgttccaaccacacgattcgtgttgaattggttttgatcccctccaaacatc 2187
Query: 733 cttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctg 792
|| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 2186 ctggccattccaaaatctgaaatcttggggttcatgtctttgtccaggagaatgttgctg 2127
Query: 793 gccttgagatcacggtgaacaactcgcagcctcgaatcccggtggagatatagcagccct 852
|||||||||||||| ||||||||||||| ||| || |||||||||||||||| |||||||
Sbjct: 2126 gccttgagatcacgatgaacaactcgcaaccttgagtcccggtggagatataacagccct 2067
Query: 853 ctagcaatgccttcgattatatcaaaccgtttcttccagtctagaagccgttgcttttca 912
| |||||| ||||| |||||||||||||||||| |||||||||| |||| |||||| |||
Sbjct: 2066 cgagcaatcccttcaattatatcaaaccgtttcctccagtctaggagcccttgcttctca 2007
Query: 913 ggattaaagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttc 972
||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 2006 ggattgaagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttc 1947
Query: 973 tcttccctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgca 1032
||||| | | |||||||||| |||| |||||| ||||||||||| ||||||| |||||
Sbjct: 1946 tcttctccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcg 1887
Query: 1033 ataagtatgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctc 1092
||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 1886 ataagtatgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctc 1827
Query: 1093 ttcacagctacttcttctcccccaggtaaagttcccatatagacaggaccaaatcctcct 1152
|| || ||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 1826 ttaacggctacttcttctcccccaggtaattttcccatatatacaggaccaaatcctcct 1767
Query: 1153 tctccaagcttgttagagtcactaaaattacttgtagcagttcttatacggtccagcgag 1212
||||||||||||| |||||||| ||||||| || |||| | |||| ||||| | |||
Sbjct: 1766 gctccaagcttgttggagtcactgaaattacaagtggcagcttttatccggtcaaaggag 1707
Query: 1213 tacactttgagttcatgactttttccatcctccacatcatcatcaaaacgaattgactgc 1272
|| ||||||||||||||||||||||||||||| || || |||||| |||| ||||||
Sbjct: 1706 tatactttgagttcatgactttttccatcctctgtgtcgtcttcaaaaggaatcgactgc 1647
Query: 1273 gagatgtccagcatagcactattctgctgggattgggtagacgaatgccttgatctccaa 1332
||||||||||||||| ||||||||||||| ||| | ||||||| |||| |||| ||||||
Sbjct: 1646 gagatgtccagcataccactattctgctgagatcgtgtagacgtatgcattgacctccaa 1587
Query: 1333 cttccgtgcactgcatctttaatatttctaccatgcttccaccacagaagaaggcaagca 1392
||| ||||| ||||||| ||||| || ||| ||||||||||||| | ||||||||
Sbjct: 1586 cttttgtgcatcacatctttgatattcctcccacgcttccaccacaggaagaggcaagct 1527
Query: 1393 gccaaaacaaataacactatggctgatattatcgtggctattttccaaattgggtgatgt 1452
||||||||||| ||| | || || | ||| ||||||| ||||||| || ||||||
Sbjct: 1526 agcaaaacaaatagcaccactgcagacactattgtggcta--ttccaaactgcatgatgt 1469
Query: 1453 cctcgcaattcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactca 1512
|| || |||||||||||||| || |||||||| |||||| |||| | || ||||
Sbjct: 1468 gagcgtaactcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactgg 1409
Query: 1513 tgcatgtcaattagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataa 1572
| |||||| || || ||| ||||||| ||| || ||| |||||| |||| |||||
Sbjct: 1408 tacatgtcgatcaggtcgctaccccacagtagacatcctattgtagtcatgtagacatag 1349
Query: 1573 gcaccgcatgagcagttgttaaggcagacagttctgcatccaggctcatctcccactgta 1632
||||| |||||||||||| | ||||| || | |||||||| ||||||| ||| |||
Sbjct: 1348 gcaccacatgagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgta 1289
Query: 1633 gatacccaatatgagaaatcaggccactttatgtttcccattggaagaaatccatcccca 1692
||| ||| ||||||||||| |||||||| |||||| || | ||||||||||||||||
Sbjct: 1288 gatggccagtatgagaaatccggccacttgatgtttgggatagaaagaaatccatcccca 1229
Query: 1693 gactgattggtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcct 1752
| || || || |||||||| |||||||||||||| ||||||||||||| ||||||
Sbjct: 1228 gtttggttcacctgacaacccaaaggtgggctcctgacacaaccttgactcccatttccc 1169
Query: 1753 gcattccactgctcctgcaacttcggatgaaaaccttttaggcaggtgcattttgccttg 1812
||||||||| || ||||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 1168 atattccactgatcaagcaactttggctgaaatccttttaggcaggtacattttgccttg 1109
Query: 1813 ccatcttgcgatgcagtgcattttgcatttggaccacatgtagcatagtattcacactca 1872
||||||||| ||||||||||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 1108 ccatcttgcatggcagtgcatttagcatttgcgccacacgtagcatagtactcacactca 1049
Query: 1873 tttgatggttggtaccagacaagctcccaatcttgtgaagattttctaaccatgtagcag 1932
||||||||||| ||||||| |||||| ||||||| || || |||||||||| |||
Sbjct: 1048 tttgatggttgcatccagacagtctcccactcttgtgctgacttcttaaccatgtaacag 989
Query: 1933 atgtctgtgccatttggcaaaacaacaaacctctgcaaagaagtgtttgttgcagtgtat 1992
|||||||| |||||||||| |||||||||||| |||| ||| ||||||| |||||||||
Sbjct: 988 atgtctgtaccatttggcataacaacaaacctttgcagagatgtgtttgatgcagtgtaa 929
Query: 1993 gtgta 1997
|||||
Sbjct: 928 gtgta 924
Score = 268 bits (135), Expect = 1e-068
Identities = 264/307 (85%)
Strand = Plus / Minus
Query: 2047 agtggcctccatggaatgcctataaaattcaccccattccactgtcccgacctccagtac 2106
||||| ||||| |||||||| | ||||||| |||| |||| ||||| ||||||||
Sbjct: 874 agtggtctccaaggaatgcccacaaaattctgcccagtccattgtcctgacctccaaatg 815
Query: 2107 gtaacgttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagc 2166
|| || ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 814 gtgacattgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagc 755
Query: 2167 gcgtatcgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctcc 2226
||||| ||||||||||| |||||||||||||||| ||| |||||||| ||||| ||||
Sbjct: 754 gcgtaccgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcg 695
Query: 2227 ttagggcccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtc 2286
||||||||||| |||| ||| ||||||||||||||||||||| |||||||||| |
Sbjct: 694 gaggggcccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgac 635
Query: 2287 gggtgccagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtg 2346
|||||||||||||||||||| ||| || || ||||||||||||||||||||||| |||
Sbjct: 634 gggtgccagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtg 575
Query: 2347 tcctgga 2353
|||||||
Sbjct: 574 tcctgga 568
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Minus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 482 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 423
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 422 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 363
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 362 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 303
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 302 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 243
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 242 cgtatccgtc 233
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 2698 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 2639
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 2638 ttgatttgct 2629
>gb|CB641434.1|CB641434 OSJNEb01B04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01B04 3', mRNA sequence
Length = 826
Score = 317 bits (160), Expect = 2e-083
Identities = 403/484 (83%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 343 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 402
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 403 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 462
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 463 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 522
Query: 493 tccgcagcattgtcttcgttccattgccgccacgcatatccagcgatgttcaaggagtcc 552
||| | | |||||||| |||||||| ||||| ||| |||| || ||||| | ||||||
Sbjct: 523 tcctcgcccttgtcttcattccattgtcgccatgcaaatcctgcaatgtttagggagtct 582
Query: 553 tcgtgacagtggaagctcacagccctctttcctgtgatgatctccaagatcaggactccg 612
| |||| || ||||||| ||||||||||||||||||||||||||| || || |||||
Sbjct: 583 tgttgaccatgaaagctcaaagccctctttcctgtgatgatctccaacattagaactcca 642
Query: 613 aagccatagacgtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatg 672
|||| ||| | || ||||| ||||| |||||||||||||| || ||||| || |||||
Sbjct: 643 aagctataaatatcggactttactgagaaaatgccttccatagcatattccggcgacata 702
Query: 673 tagccaaatgtaccgacgacccgattcgtgttgaattggttttggtcccctccaaacatc 732
||||||||||| || || || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 703 tagccaaatgttccaaccacacgattcgtgttgaattggttttgatcccctccaaacatc 762
Query: 733 cttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctg 792
|| ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 763 ctggccattccaaaatctgaaatcttggggttcatgtctttgtccaggaaaatgttgctg 822
Query: 793 gcct 796
||||
Sbjct: 823 gcct 826
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 251 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 310
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 311 ttgatttgct 320
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBb0041B22
Length = 142446
Score = 291 bits (147), Expect = 1e-075
Identities = 204/223 (91%)
Strand = Plus / Plus
Query: 694 cgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaatctgat 753
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 37839 cgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaa 37898
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtgaaca 813
|||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 37899 atcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaaca 37958
Query: 814 actcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcgattata 873
||||||| ||| || |||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 37959 actcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattata 38018
Query: 874 tcaaaccgtttcttccagtctagaagccgttgcttttcaggat 916
|||||||||||| |||||||||| |||| |||||| |||||||
Sbjct: 38019 tcaaaccgtttcctccagtctaggagcccttgcttctcaggat 38061
Score = 268 bits (135), Expect = 1e-068
Identities = 186/203 (91%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 38147 aagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttct 38206
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 38207 ccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 38266
Query: 1039 atgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcaca 1098
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 38267 atgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacg 38326
Query: 1099 gctacttcttctcccccaggtaa 1121
|||||||||||||||||||||||
Sbjct: 38327 gctacttcttctcccccaggtaa 38349
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 42986 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 43045
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 43046 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 43105
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 43106 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 43165
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 43166 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 43225
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 43226 cgtatccgtc 43235
Score = 256 bits (129), Expect = 6e-065
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 2113 ttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagcgcgtat 2172
||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 42660 ttgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtac 42719
Query: 2173 cgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctccttaggg 2232
||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |||
Sbjct: 42720 cgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcggagggg 42779
Query: 2233 cccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcgggtgc 2292
|||||||| |||| ||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 42780 cccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgc 42839
Query: 2293 cagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcctgg 2352
|||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 42840 cagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctgg 42899
Query: 2353 a 2353
|
Sbjct: 42900 a 42900
Score = 200 bits (101), Expect = 3e-048
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 1785 accttttaggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttgg 1844
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 40414 accttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgc 40473
Query: 1845 accacatgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatc 1904
||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 40474 gccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactc 40533
Query: 1905 ttgtgaagattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacct 1964
||||| || || |||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 40534 ttgtgctgacttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacct 40593
Query: 1965 ctgcaaagaagtgtttgttgcagtgtatgtgta 1997
|||| ||| ||||||| ||||||||| |||||
Sbjct: 40594 ttgcagagatgtgtttgatgcagtgtaagtgta 40626
Score = 184 bits (93), Expect = 2e-043
Identities = 180/209 (86%)
Strand = Plus / Plus
Query: 1127 ccatatagacaggaccaaatcctccttctccaagcttgttagagtcactaaaattacttg 1186
||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| |
Sbjct: 38464 ccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaag 38523
Query: 1187 tagcagttcttatacggtccagcgagtacactttgagttcatgactttttccatcctcca 1246
| |||| | |||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 38524 tggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctg 38583
Query: 1247 catcatcatcaaaacgaattgactgcgagatgtccagcatagcactattctgctgggatt 1306
|| || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 38584 tgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatc 38643
Query: 1307 gggtagacgaatgccttgatctccaactt 1335
| ||||||| |||| |||| |||||||||
Sbjct: 38644 gtgtagacgtatgcattgacctccaactt 38672
Score = 109 bits (55), Expect = 8e-021
Identities = 256/323 (79%)
Strand = Plus / Plus
Query: 1462 tcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactcatgcatgtca 1521
|||||||||||||| || |||||||| |||||| |||| | || |||| | ||||||
Sbjct: 39494 tcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatgtcg 39553
Query: 1522 attagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataagcaccgcat 1581
|| || ||| ||||||| ||| || ||| |||||| |||| ||||| ||||| |||
Sbjct: 39554 atcaggtcgctaccccacagtagacatcctattgtagtcatgtagacataggcaccacat 39613
Query: 1582 gagcagttgttaaggcagacagttctgcatccaggctcatctcccactgtagatacccaa 1641
||||||||| | ||||| || | |||||||| ||||||| ||| |||||| |||
Sbjct: 39614 gagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccag 39673
Query: 1642 tatgagaaatcaggccactttatgtttcccattggaagaaatccatccccagactgattg 1701
||||||||||| |||||||| |||||| || | ||||||||||||||||| || ||
Sbjct: 39674 tatgagaaatccggccacttgatgtttgggatagaaagaaatccatccccagtttggttc 39733
Query: 1702 gtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcctgcattccac 1761
|| |||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 39734 acctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccac 39793
Query: 1762 tgctcctgcaacttcggatgaaa 1784
|| || ||||||| || |||||
Sbjct: 39794 tgatcaagcaactttggctgaaa 39816
Score = 103 bits (52), Expect = 5e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 37288 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 37347
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 37348 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 37407
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 37408 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 37467
Query: 493 tccgcagcattgtcttcgttccattgccgcca 524
||| | | |||||||| |||||||| |||||
Sbjct: 37468 tcctcgcccttgtcttcattccattgtcgcca 37499
Score = 91.7 bits (46), Expect = 2e-015
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 565 aagctcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacg 624
||||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |
Sbjct: 37633 aagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaata 37692
Query: 625 tcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcca 678
|| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 37693 tcggactttactgagaaaatgccttccatagcatattccggcgacatatagcca 37746
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 37196 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 37255
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 37256 ttgatttgct 37265
Score = 73.8 bits (37), Expect = 5e-010
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 685 ccgacgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattcca 744
|||||||| || || ||||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct: 24342 ccgacgacgcggttggtgttgacctggttctggtcgccgccgaagatcctggccatgccg 24401
Query: 745 aaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatca 804
|| || || |||||||| |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 24402 aagtcggagatcttggggttcatgtcgcggtcgaggaggatgttgctggccttgaggtcg 24461
Query: 805 cggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctc 853
||||| || || || |||||||| || |||||||| || || |||||||
Sbjct: 24462 cggtgcaccacgcggagcctcgagtcgcggtggaggtacaggagccctc 24510
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 24689 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 24748
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 24749 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 24808
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 24809 atcacctcgttcttgaa 24825
Score = 44.1 bits (22), Expect = 0.40
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatc 803
|||||||| |||||||| |||| || || ||||||| ||||||||||||
Sbjct: 7325 atcttggggttcatgtctccgtcgagcaggatgttgccggccttgagatc 7374
>gb|AACV01016535.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016535, whole
genome shotgun sequence
Length = 28722
Score = 291 bits (147), Expect = 1e-075
Identities = 204/223 (91%)
Strand = Plus / Plus
Query: 694 cgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaatctgat 753
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 25008 cgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaa 25067
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtgaaca 813
|||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 25068 atcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaaca 25127
Query: 814 actcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcgattata 873
||||||| ||| || |||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 25128 actcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattata 25187
Query: 874 tcaaaccgtttcttccagtctagaagccgttgcttttcaggat 916
|||||||||||| |||||||||| |||| |||||| |||||||
Sbjct: 25188 tcaaaccgtttcctccagtctaggagcccttgcttctcaggat 25230
Score = 268 bits (135), Expect = 1e-068
Identities = 186/203 (91%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 25316 aagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttct 25375
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 25376 ccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 25435
Query: 1039 atgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcaca 1098
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 25436 atgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacg 25495
Query: 1099 gctacttcttctcccccaggtaa 1121
|||||||||||||||||||||||
Sbjct: 25496 gctacttcttctcccccaggtaa 25518
Score = 200 bits (101), Expect = 3e-048
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 1785 accttttaggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttgg 1844
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 27582 accttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgc 27641
Query: 1845 accacatgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatc 1904
||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 27642 gccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactc 27701
Query: 1905 ttgtgaagattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacct 1964
||||| || || |||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 27702 ttgtgctgacttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacct 27761
Query: 1965 ctgcaaagaagtgtttgttgcagtgtatgtgta 1997
|||| ||| ||||||| ||||||||| |||||
Sbjct: 27762 ttgcagagatgtgtttgatgcagtgtaagtgta 27794
Score = 184 bits (93), Expect = 2e-043
Identities = 180/209 (86%)
Strand = Plus / Plus
Query: 1127 ccatatagacaggaccaaatcctccttctccaagcttgttagagtcactaaaattacttg 1186
||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| |
Sbjct: 25633 ccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaag 25692
Query: 1187 tagcagttcttatacggtccagcgagtacactttgagttcatgactttttccatcctcca 1246
| |||| | |||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 25693 tggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctg 25752
Query: 1247 catcatcatcaaaacgaattgactgcgagatgtccagcatagcactattctgctgggatt 1306
|| || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 25753 tgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatc 25812
Query: 1307 gggtagacgaatgccttgatctccaactt 1335
| ||||||| |||| |||| |||||||||
Sbjct: 25813 gtgtagacgtatgcattgacctccaactt 25841
Score = 103 bits (52), Expect = 5e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 24457 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 24516
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 24517 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 24576
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 24577 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 24636
Query: 493 tccgcagcattgtcttcgttccattgccgcca 524
||| | | |||||||| |||||||| |||||
Sbjct: 24637 tcctcgcccttgtcttcattccattgtcgcca 24668
Score = 101 bits (51), Expect = 2e-018
Identities = 256/323 (79%), Gaps = 1/323 (0%)
Strand = Plus / Plus
Query: 1462 tcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactcatgcatgtca 1521
|||||||||||||| || |||||||| |||||| |||| | || |||| | ||||||
Sbjct: 26663 tcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatgtcg 26722
Query: 1522 attagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataagcaccgcat 1581
|| || ||| ||||||| ||| || ||| |||||| |||| ||||| ||||| |||
Sbjct: 26723 atcaggtcgctaccccacagtagacatcctattgtagtcatgtagacataggcaccacat 26782
Query: 1582 gagcagttgttaaggcagacagttctgcatccaggctcatctcccactgtagatacccaa 1641
||||||||| | ||||| || | |||||||| ||||||| ||| |||||| |||
Sbjct: 26783 gagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccag 26842
Query: 1642 tatgagaaatcaggccactttatgtttcccattggaagaaatccatccccagactgattg 1701
||||||||||| |||||||| |||||| || | ||||||||||||||||| || ||
Sbjct: 26843 tatgagaaatccggccacttgatgtttgg-atagaaagaaatccatccccagtttggttc 26901
Query: 1702 gtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcctgcattccac 1761
|| |||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 26902 acctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccac 26961
Query: 1762 tgctcctgcaacttcggatgaaa 1784
|| || ||||||| || |||||
Sbjct: 26962 tgatcaagcaactttggctgaaa 26984
Score = 91.7 bits (46), Expect = 2e-015
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 565 aagctcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacg 624
||||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |
Sbjct: 24802 aagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaata 24861
Query: 625 tcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcca 678
|| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 24862 tcggactttactgagaaaatgccttccatagcatattccggcgacatatagcca 24915
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 24365 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 24424
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 24425 ttgatttgct 24434
Score = 73.8 bits (37), Expect = 5e-010
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 685 ccgacgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattcca 744
|||||||| || || ||||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct: 11509 ccgacgacgcggttggtgttgacctggttctggtcgccgccgaagatcctggccatgccg 11568
Query: 745 aaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatca 804
|| || || |||||||| |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 11569 aagtcggagatcttggggttcatgtcgcggtcgaggaggatgttgctggccttgaggtcg 11628
Query: 805 cggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctc 853
||||| || || || |||||||| || |||||||| || || |||||||
Sbjct: 11629 cggtgcaccacgcggagcctcgagtcgcggtggaggtacaggagccctc 11677
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 11856 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 11915
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 11916 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 11975
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 11976 atcacctcgttcttgaa 11992
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0534A03
Length = 153170
Score = 291 bits (147), Expect = 1e-075
Identities = 204/223 (91%)
Strand = Plus / Plus
Query: 694 cgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaatctgat 753
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 141346 cgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaa 141405
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtgaaca 813
|||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 141406 atcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaaca 141465
Query: 814 actcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcgattata 873
||||||| ||| || |||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 141466 actcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattata 141525
Query: 874 tcaaaccgtttcttccagtctagaagccgttgcttttcaggat 916
|||||||||||| |||||||||| |||| |||||| |||||||
Sbjct: 141526 tcaaaccgtttcctccagtctaggagcccttgcttctcaggat 141568
Score = 268 bits (135), Expect = 1e-068
Identities = 186/203 (91%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 141654 aagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttct 141713
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 141714 ccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 141773
Query: 1039 atgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcaca 1098
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 141774 atgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacg 141833
Query: 1099 gctacttcttctcccccaggtaa 1121
|||||||||||||||||||||||
Sbjct: 141834 gctacttcttctcccccaggtaa 141856
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 146493 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 146552
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 146553 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 146612
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 146613 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 146672
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 146673 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 146732
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 146733 cgtatccgtc 146742
Score = 256 bits (129), Expect = 6e-065
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 2113 ttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagcgcgtat 2172
||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 146167 ttgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtac 146226
Query: 2173 cgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctccttaggg 2232
||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |||
Sbjct: 146227 cgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcggagggg 146286
Query: 2233 cccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcgggtgc 2292
|||||||| |||| ||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 146287 cccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgc 146346
Query: 2293 cagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcctgg 2352
|||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 146347 cagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctgg 146406
Query: 2353 a 2353
|
Sbjct: 146407 a 146407
Score = 200 bits (101), Expect = 3e-048
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 1785 accttttaggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttgg 1844
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 143921 accttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgc 143980
Query: 1845 accacatgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatc 1904
||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 143981 gccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactc 144040
Query: 1905 ttgtgaagattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacct 1964
||||| || || |||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 144041 ttgtgctgacttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacct 144100
Query: 1965 ctgcaaagaagtgtttgttgcagtgtatgtgta 1997
|||| ||| ||||||| ||||||||| |||||
Sbjct: 144101 ttgcagagatgtgtttgatgcagtgtaagtgta 144133
Score = 184 bits (93), Expect = 2e-043
Identities = 180/209 (86%)
Strand = Plus / Plus
Query: 1127 ccatatagacaggaccaaatcctccttctccaagcttgttagagtcactaaaattacttg 1186
||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| |
Sbjct: 141971 ccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaag 142030
Query: 1187 tagcagttcttatacggtccagcgagtacactttgagttcatgactttttccatcctcca 1246
| |||| | |||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 142031 tggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctg 142090
Query: 1247 catcatcatcaaaacgaattgactgcgagatgtccagcatagcactattctgctgggatt 1306
|| || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 142091 tgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatc 142150
Query: 1307 gggtagacgaatgccttgatctccaactt 1335
| ||||||| |||| |||| |||||||||
Sbjct: 142151 gtgtagacgtatgcattgacctccaactt 142179
Score = 109 bits (55), Expect = 8e-021
Identities = 256/323 (79%)
Strand = Plus / Plus
Query: 1462 tcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactcatgcatgtca 1521
|||||||||||||| || |||||||| |||||| |||| | || |||| | ||||||
Sbjct: 143001 tcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatgtcg 143060
Query: 1522 attagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataagcaccgcat 1581
|| || ||| ||||||| ||| || ||| |||||| |||| ||||| ||||| |||
Sbjct: 143061 atcaggtcgctaccccacagtagacatcctattgtagtcatgtagacataggcaccacat 143120
Query: 1582 gagcagttgttaaggcagacagttctgcatccaggctcatctcccactgtagatacccaa 1641
||||||||| | ||||| || | |||||||| ||||||| ||| |||||| |||
Sbjct: 143121 gagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccag 143180
Query: 1642 tatgagaaatcaggccactttatgtttcccattggaagaaatccatccccagactgattg 1701
||||||||||| |||||||| |||||| || | ||||||||||||||||| || ||
Sbjct: 143181 tatgagaaatccggccacttgatgtttgggatagaaagaaatccatccccagtttggttc 143240
Query: 1702 gtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcctgcattccac 1761
|| |||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 143241 acctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccac 143300
Query: 1762 tgctcctgcaacttcggatgaaa 1784
|| || ||||||| || |||||
Sbjct: 143301 tgatcaagcaactttggctgaaa 143323
Score = 103 bits (52), Expect = 5e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 140795 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 140854
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 140855 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 140914
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 140915 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 140974
Query: 493 tccgcagcattgtcttcgttccattgccgcca 524
||| | | |||||||| |||||||| |||||
Sbjct: 140975 tcctcgcccttgtcttcattccattgtcgcca 141006
Score = 91.7 bits (46), Expect = 2e-015
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 565 aagctcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacg 624
||||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |
Sbjct: 141140 aagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaata 141199
Query: 625 tcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcca 678
|| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 141200 tcggactttactgagaaaatgccttccatagcatattccggcgacatatagcca 141253
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 140703 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 140762
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 140763 ttgatttgct 140772
Score = 73.8 bits (37), Expect = 5e-010
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 685 ccgacgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattcca 744
|||||||| || || ||||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct: 127849 ccgacgacgcggttggtgttgacctggttctggtcgccgccgaagatcctggccatgccg 127908
Query: 745 aaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatca 804
|| || || |||||||| |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 127909 aagtcggagatcttggggttcatgtcgcggtcgaggaggatgttgctggccttgaggtcg 127968
Query: 805 cggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctc 853
||||| || || || |||||||| || |||||||| || || |||||||
Sbjct: 127969 cggtgcaccacgcggagcctcgagtcgcggtggaggtacaggagccctc 128017
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 128196 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 128255
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 128256 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 128315
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 128316 atcacctcgttcttgaa 128332
Score = 44.1 bits (22), Expect = 0.40
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatc 803
|||||||| |||||||| |||| || || ||||||| ||||||||||||
Sbjct: 110832 atcttggggttcatgtctccgtcgagcaggatgttgccggccttgagatc 110881
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 291 bits (147), Expect = 1e-075
Identities = 204/223 (91%)
Strand = Plus / Plus
Query: 694 cgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaatctgat 753
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 9437168 cgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaa 9437227
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtgaaca 813
|||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9437228 atcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaaca 9437287
Query: 814 actcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcgattata 873
||||||| ||| || |||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 9437288 actcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattata 9437347
Query: 874 tcaaaccgtttcttccagtctagaagccgttgcttttcaggat 916
|||||||||||| |||||||||| |||| |||||| |||||||
Sbjct: 9437348 tcaaaccgtttcctccagtctaggagcccttgcttctcaggat 9437390
Score = 268 bits (135), Expect = 1e-068
Identities = 186/203 (91%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 9437476 aagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttct 9437535
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 9437536 ccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 9437595
Query: 1039 atgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcaca 1098
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 9437596 atgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacg 9437655
Query: 1099 gctacttcttctcccccaggtaa 1121
|||||||||||||||||||||||
Sbjct: 9437656 gctacttcttctcccccaggtaa 9437678
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 9442315 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 9442374
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 9442375 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 9442434
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 9442435 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 9442494
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 9442495 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 9442554
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 9442555 cgtatccgtc 9442564
Score = 256 bits (129), Expect = 6e-065
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 2113 ttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagcgcgtat 2172
||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 9441989 ttgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtac 9442048
Query: 2173 cgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctccttaggg 2232
||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |||
Sbjct: 9442049 cgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcggagggg 9442108
Query: 2233 cccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcgggtgc 2292
|||||||| |||| ||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 9442109 cccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgc 9442168
Query: 2293 cagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcctgg 2352
|||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 9442169 cagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctgg 9442228
Query: 2353 a 2353
|
Sbjct: 9442229 a 9442229
Score = 200 bits (101), Expect = 3e-048
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 1785 accttttaggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttgg 1844
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 9439743 accttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgc 9439802
Query: 1845 accacatgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatc 1904
||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 9439803 gccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactc 9439862
Query: 1905 ttgtgaagattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacct 1964
||||| || || |||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 9439863 ttgtgctgacttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacct 9439922
Query: 1965 ctgcaaagaagtgtttgttgcagtgtatgtgta 1997
|||| ||| ||||||| ||||||||| |||||
Sbjct: 9439923 ttgcagagatgtgtttgatgcagtgtaagtgta 9439955
Score = 184 bits (93), Expect = 2e-043
Identities = 180/209 (86%)
Strand = Plus / Plus
Query: 1127 ccatatagacaggaccaaatcctccttctccaagcttgttagagtcactaaaattacttg 1186
||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| |
Sbjct: 9437793 ccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaag 9437852
Query: 1187 tagcagttcttatacggtccagcgagtacactttgagttcatgactttttccatcctcca 1246
| |||| | |||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 9437853 tggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctg 9437912
Query: 1247 catcatcatcaaaacgaattgactgcgagatgtccagcatagcactattctgctgggatt 1306
|| || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 9437913 tgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatc 9437972
Query: 1307 gggtagacgaatgccttgatctccaactt 1335
| ||||||| |||| |||| |||||||||
Sbjct: 9437973 gtgtagacgtatgcattgacctccaactt 9438001
Score = 109 bits (55), Expect = 8e-021
Identities = 256/323 (79%)
Strand = Plus / Plus
Query: 1462 tcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactcatgcatgtca 1521
|||||||||||||| || |||||||| |||||| |||| | || |||| | ||||||
Sbjct: 9438823 tcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatgtcg 9438882
Query: 1522 attagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataagcaccgcat 1581
|| || ||| ||||||| ||| || ||| |||||| |||| ||||| ||||| |||
Sbjct: 9438883 atcaggtcgctaccccacagtagacatcctattgtagtcatgtagacataggcaccacat 9438942
Query: 1582 gagcagttgttaaggcagacagttctgcatccaggctcatctcccactgtagatacccaa 1641
||||||||| | ||||| || | |||||||| ||||||| ||| |||||| |||
Sbjct: 9438943 gagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccag 9439002
Query: 1642 tatgagaaatcaggccactttatgtttcccattggaagaaatccatccccagactgattg 1701
||||||||||| |||||||| |||||| || | ||||||||||||||||| || ||
Sbjct: 9439003 tatgagaaatccggccacttgatgtttgggatagaaagaaatccatccccagtttggttc 9439062
Query: 1702 gtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcctgcattccac 1761
|| |||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 9439063 acctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccac 9439122
Query: 1762 tgctcctgcaacttcggatgaaa 1784
|| || ||||||| || |||||
Sbjct: 9439123 tgatcaagcaactttggctgaaa 9439145
Score = 103 bits (52), Expect = 5e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 9436617 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 9436676
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 9436677 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 9436736
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 9436737 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 9436796
Query: 493 tccgcagcattgtcttcgttccattgccgcca 524
||| | | |||||||| |||||||| |||||
Sbjct: 9436797 tcctcgcccttgtcttcattccattgtcgcca 9436828
Score = 91.7 bits (46), Expect = 2e-015
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 565 aagctcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacg 624
||||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |
Sbjct: 9436962 aagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaata 9437021
Query: 625 tcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcca 678
|| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 9437022 tcggactttactgagaaaatgccttccatagcatattccggcgacatatagcca 9437075
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 9436525 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 9436584
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 9436585 ttgatttgct 9436594
Score = 73.8 bits (37), Expect = 5e-010
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 685 ccgacgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattcca 744
|||||||| || || ||||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct: 9423671 ccgacgacgcggttggtgttgacctggttctggtcgccgccgaagatcctggccatgccg 9423730
Query: 745 aaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatca 804
|| || || |||||||| |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 9423731 aagtcggagatcttggggttcatgtcgcggtcgaggaggatgttgctggccttgaggtcg 9423790
Query: 805 cggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctc 853
||||| || || || |||||||| || |||||||| || || |||||||
Sbjct: 9423791 cggtgcaccacgcggagcctcgagtcgcggtggaggtacaggagccctc 9423839
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 9424018 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 9424077
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 9424078 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 9424137
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 9424138 atcacctcgttcttgaa 9424154
Score = 58.0 bits (29), Expect = 3e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtc 770
||||||| ||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 13620023 ctccaaagatctttgccatcccaaaatctgcaatcttgggtttcatgtc 13620071
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 931 tctagacttttgttaggcatgtactcatacaccaggatcttctcttc 977
||||||||||||||||||||||| ||||| || || | |||||||||
Sbjct: 13612917 tctagacttttgttaggcatgtattcatagacaagtagcttctcttc 13612963
Score = 54.0 bits (27), Expect = 4e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
|||||||||||||||||||| || || ||||| ||||| ||| ||| ||||| || |||
Sbjct: 8534431 atccttgccattccaaaatccgagattttggggttcatctcccggtcgaggagtatattg 8534372
Query: 790 ctggccttgagatcacggtgaacaactcgca 820
|| || || ||||| | ||||| ||||||||
Sbjct: 8534371 cttgctttcagatccctgtgaataactcgca 8534341
Score = 52.0 bits (26), Expect = 0.002
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 929 catctagacttttgttaggcatgtactcatacaccaggatcttctc 974
||||||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct: 15789829 catctaggcttttgtttggcatgtactcgtacacgagtatcttctc 15789784
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccagga 781
||||||| | |||||||| ||||| ||||| ||||| || ||||| | |||||||| |
Sbjct: 13612594 ctccaaaaagccttgccaagccaaagtctgaaatcttagggttcatatttgcgtccagta 13612653
Query: 782 gaatgttgctggccttgagatcacggtgaa 811
||| |||||| || || |||||||||||||
Sbjct: 13612654 gaacgttgcttgcttttagatcacggtgaa 13612683
Score = 48.1 bits (24), Expect = 0.026
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtg 809
|||||||| ||||||| |||||| || | |||||||| ||||| |||||||||||
Sbjct: 8715727 atcttggggttcatgttcgcgtctagcaagatgttgctcgccttcagatcacggtg 8715782
Score = 48.1 bits (24), Expect = 0.026
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 778 aggagaatgttgctggccttgagatcacggtg 809
||||| |||||||||||||||||||| |||||
Sbjct: 8607949 aggagtatgttgctggccttgagatcgcggtg 8607918
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2722 gcgccggcgaggagcaggaagaggagccgaggag 2755
|||||||||||||| |||| |||||| |||||||
Sbjct: 12143639 gcgccggcgaggaggaggaggaggaggcgaggag 12143672
Score = 44.1 bits (22), Expect = 0.40
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatc 803
|||||||| |||||||| |||| || || ||||||| ||||||||||||
Sbjct: 9406654 atcttggggttcatgtctccgtcgagcaggatgttgccggccttgagatc 9406703
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1130 tatagacaggaccaaatcctccttctccaagctt 1163
|||| |||| ||||||||| ||||||||||||||
Sbjct: 8701747 tatatacagtaccaaatccgccttctccaagctt 8701714
Score = 44.1 bits (22), Expect = 0.40
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 937 cttttgttaggcatgtactcatacac 962
||||||||||||||||| ||||||||
Sbjct: 8668134 cttttgttaggcatgtattcatacac 8668109
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 291 bits (147), Expect = 1e-075
Identities = 204/223 (91%)
Strand = Plus / Plus
Query: 694 cgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaatctgat 753
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 7267681 cgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaa 7267740
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtgaaca 813
|||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7267741 atcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaaca 7267800
Query: 814 actcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcgattata 873
||||||| ||| || |||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 7267801 actcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattata 7267860
Query: 874 tcaaaccgtttcttccagtctagaagccgttgcttttcaggat 916
|||||||||||| |||||||||| |||| |||||| |||||||
Sbjct: 7267861 tcaaaccgtttcctccagtctaggagcccttgcttctcaggat 7267903
Score = 268 bits (135), Expect = 1e-068
Identities = 186/203 (91%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 7267989 aagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttct 7268048
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 7268049 ccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 7268108
Query: 1039 atgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcaca 1098
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 7268109 atgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacg 7268168
Query: 1099 gctacttcttctcccccaggtaa 1121
|||||||||||||||||||||||
Sbjct: 7268169 gctacttcttctcccccaggtaa 7268191
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 7273709 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 7273768
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 7273769 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 7273828
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 7273829 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 7273888
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 7273889 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 7273948
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 7273949 cgtatccgtc 7273958
Score = 256 bits (129), Expect = 6e-065
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 2113 ttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagcgcgtat 2172
||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 7273383 ttgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtac 7273442
Query: 2173 cgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctccttaggg 2232
||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |||
Sbjct: 7273443 cgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcggagggg 7273502
Query: 2233 cccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcgggtgc 2292
|||||||| |||| ||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 7273503 cccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgc 7273562
Query: 2293 cagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcctgg 2352
|||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 7273563 cagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctgg 7273622
Query: 2353 a 2353
|
Sbjct: 7273623 a 7273623
Score = 200 bits (101), Expect = 3e-048
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 1785 accttttaggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttgg 1844
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 7270255 accttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgc 7270314
Query: 1845 accacatgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatc 1904
||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 7270315 gccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactc 7270374
Query: 1905 ttgtgaagattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacct 1964
||||| || || |||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 7270375 ttgtgctgacttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacct 7270434
Query: 1965 ctgcaaagaagtgtttgttgcagtgtatgtgta 1997
|||| ||| ||||||| ||||||||| |||||
Sbjct: 7270435 ttgcagagatgtgtttgatgcagtgtaagtgta 7270467
Score = 184 bits (93), Expect = 2e-043
Identities = 180/209 (86%)
Strand = Plus / Plus
Query: 1127 ccatatagacaggaccaaatcctccttctccaagcttgttagagtcactaaaattacttg 1186
||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| |
Sbjct: 7268306 ccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaag 7268365
Query: 1187 tagcagttcttatacggtccagcgagtacactttgagttcatgactttttccatcctcca 1246
| |||| | |||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 7268366 tggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctg 7268425
Query: 1247 catcatcatcaaaacgaattgactgcgagatgtccagcatagcactattctgctgggatt 1306
|| || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 7268426 tgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatc 7268485
Query: 1307 gggtagacgaatgccttgatctccaactt 1335
| ||||||| |||| |||| |||||||||
Sbjct: 7268486 gtgtagacgtatgcattgacctccaactt 7268514
Score = 103 bits (52), Expect = 5e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 7267130 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 7267189
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 7267190 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 7267249
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 7267250 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 7267309
Query: 493 tccgcagcattgtcttcgttccattgccgcca 524
||| | | |||||||| |||||||| |||||
Sbjct: 7267310 tcctcgcccttgtcttcattccattgtcgcca 7267341
Score = 101 bits (51), Expect = 2e-018
Identities = 256/323 (79%), Gaps = 1/323 (0%)
Strand = Plus / Plus
Query: 1462 tcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactcatgcatgtca 1521
|||||||||||||| || |||||||| |||||| |||| | || |||| | ||||||
Sbjct: 7269336 tcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatgtcg 7269395
Query: 1522 attagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataagcaccgcat 1581
|| || ||| ||||||| ||| || ||| |||||| |||| ||||| ||||| |||
Sbjct: 7269396 atcaggtcgctaccccacagtagacatcctattgtagtcatgtagacataggcaccacat 7269455
Query: 1582 gagcagttgttaaggcagacagttctgcatccaggctcatctcccactgtagatacccaa 1641
||||||||| | ||||| || | |||||||| ||||||| ||| |||||| |||
Sbjct: 7269456 gagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccag 7269515
Query: 1642 tatgagaaatcaggccactttatgtttcccattggaagaaatccatccccagactgattg 1701
||||||||||| |||||||| |||||| || | ||||||||||||||||| || ||
Sbjct: 7269516 tatgagaaatccggccacttgatgtttgg-atagaaagaaatccatccccagtttggttc 7269574
Query: 1702 gtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcctgcattccac 1761
|| |||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 7269575 acctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccac 7269634
Query: 1762 tgctcctgcaacttcggatgaaa 1784
|| || ||||||| || |||||
Sbjct: 7269635 tgatcaagcaactttggctgaaa 7269657
Score = 91.7 bits (46), Expect = 2e-015
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 565 aagctcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacg 624
||||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |
Sbjct: 7267475 aagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaata 7267534
Query: 625 tcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcca 678
|| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 7267535 tcggactttactgagaaaatgccttccatagcatattccggcgacatatagcca 7267588
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 7267038 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 7267097
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 7267098 ttgatttgct 7267107
Score = 73.8 bits (37), Expect = 5e-010
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 685 ccgacgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattcca 744
|||||||| || || ||||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct: 7254182 ccgacgacgcggttggtgttgacctggttctggtcgccgccgaagatcctggccatgccg 7254241
Query: 745 aaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatca 804
|| || || |||||||| |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 7254242 aagtcggagatcttggggttcatgtcgcggtcgaggaggatgttgctggccttgaggtcg 7254301
Query: 805 cggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctc 853
||||| || || || |||||||| || |||||||| || || |||||||
Sbjct: 7254302 cggtgcaccacgcggagcctcgagtcgcggtggaggtacaggagccctc 7254350
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 7254529 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 7254588
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 7254589 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 7254648
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 7254649 atcacctcgttcttgaa 7254665
Score = 58.0 bits (29), Expect = 3e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtc 770
||||||| ||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 11465880 ctccaaagatctttgccatcccaaaatctgcaatcttgggtttcatgtc 11465928
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 931 tctagacttttgttaggcatgtactcatacaccaggatcttctcttc 977
||||||||||||||||||||||| ||||| || || | |||||||||
Sbjct: 11458769 tctagacttttgttaggcatgtattcatagacaagtagcttctcttc 11458815
Score = 54.0 bits (27), Expect = 4e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
|||||||||||||||||||| || || ||||| ||||| ||| ||| ||||| || |||
Sbjct: 6407917 atccttgccattccaaaatccgagattttggggttcatctcccggtcgaggagtatattg 6407858
Query: 790 ctggccttgagatcacggtgaacaactcgca 820
|| || || ||||| | ||||| ||||||||
Sbjct: 6407857 cttgctttcagatccctgtgaataactcgca 6407827
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccagga 781
||||||| | |||||||| ||||| ||||| ||||| || ||||| | |||||||| |
Sbjct: 11458446 ctccaaaaagccttgccaagccaaagtctgaaatcttagggttcatatttgcgtccagta 11458505
Query: 782 gaatgttgctggccttgagatcacggtgaa 811
||| |||||| || || |||||||||||||
Sbjct: 11458506 gaacgttgcttgcttttagatcacggtgaa 11458535
Score = 48.1 bits (24), Expect = 0.026
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtg 809
|||||||| ||||||| |||||| || | |||||||| ||||| |||||||||||
Sbjct: 6583785 atcttggggttcatgttcgcgtctagcaagatgttgctcgccttcagatcacggtg 6583840
Score = 48.1 bits (24), Expect = 0.026
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 778 aggagaatgttgctggccttgagatcacggtg 809
||||| |||||||||||||||||||| |||||
Sbjct: 6476018 aggagtatgttgctggccttgagatcgcggtg 6475987
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2722 gcgccggcgaggagcaggaagaggagccgaggag 2755
|||||||||||||| |||| |||||| |||||||
Sbjct: 10021011 gcgccggcgaggaggaggaggaggaggcgaggag 10021044
Score = 44.1 bits (22), Expect = 0.40
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatc 803
|||||||| |||||||| |||| || || ||||||| ||||||||||||
Sbjct: 7237233 atcttggggttcatgtctccgtcgagcaggatgttgccggccttgagatc 7237282
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1130 tatagacaggaccaaatcctccttctccaagctt 1163
|||| |||| ||||||||| ||||||||||||||
Sbjct: 6569803 tatatacagtaccaaatccgccttctccaagctt 6569770
Score = 44.1 bits (22), Expect = 0.40
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 937 cttttgttaggcatgtactcatacac 962
||||||||||||||||| ||||||||
Sbjct: 6522203 cttttgttaggcatgtattcatacac 6522178
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 291 bits (147), Expect = 1e-075
Identities = 204/223 (91%)
Strand = Plus / Plus
Query: 694 cgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaatctgat 753
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 20667120 cgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaa 20667179
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtgaaca 813
|||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20667180 atcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaaca 20667239
Query: 814 actcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcgattata 873
||||||| ||| || |||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 20667240 actcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattata 20667299
Query: 874 tcaaaccgtttcttccagtctagaagccgttgcttttcaggat 916
|||||||||||| |||||||||| |||| |||||| |||||||
Sbjct: 20667300 tcaaaccgtttcctccagtctaggagcccttgcttctcaggat 20667342
Score = 268 bits (135), Expect = 1e-068
Identities = 186/203 (91%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 20667428 aagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttct 20667487
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 20667488 ccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 20667547
Query: 1039 atgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcaca 1098
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 20667548 atgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacg 20667607
Query: 1099 gctacttcttctcccccaggtaa 1121
|||||||||||||||||||||||
Sbjct: 20667608 gctacttcttctcccccaggtaa 20667630
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 20673148 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 20673207
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 20673208 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 20673267
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 20673268 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 20673327
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 20673328 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 20673387
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 20673388 cgtatccgtc 20673397
Score = 256 bits (129), Expect = 6e-065
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 2113 ttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagcgcgtat 2172
||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 20672822 ttgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtac 20672881
Query: 2173 cgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctccttaggg 2232
||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |||
Sbjct: 20672882 cgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcggagggg 20672941
Query: 2233 cccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcgggtgc 2292
|||||||| |||| ||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 20672942 cccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgc 20673001
Query: 2293 cagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcctgg 2352
|||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 20673002 cagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctgg 20673061
Query: 2353 a 2353
|
Sbjct: 20673062 a 20673062
Score = 200 bits (101), Expect = 3e-048
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 1785 accttttaggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttgg 1844
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 20669694 accttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgc 20669753
Query: 1845 accacatgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatc 1904
||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 20669754 gccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactc 20669813
Query: 1905 ttgtgaagattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacct 1964
||||| || || |||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 20669814 ttgtgctgacttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacct 20669873
Query: 1965 ctgcaaagaagtgtttgttgcagtgtatgtgta 1997
|||| ||| ||||||| ||||||||| |||||
Sbjct: 20669874 ttgcagagatgtgtttgatgcagtgtaagtgta 20669906
Score = 184 bits (93), Expect = 2e-043
Identities = 180/209 (86%)
Strand = Plus / Plus
Query: 1127 ccatatagacaggaccaaatcctccttctccaagcttgttagagtcactaaaattacttg 1186
||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| |
Sbjct: 20667745 ccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaag 20667804
Query: 1187 tagcagttcttatacggtccagcgagtacactttgagttcatgactttttccatcctcca 1246
| |||| | |||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 20667805 tggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctg 20667864
Query: 1247 catcatcatcaaaacgaattgactgcgagatgtccagcatagcactattctgctgggatt 1306
|| || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 20667865 tgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatc 20667924
Query: 1307 gggtagacgaatgccttgatctccaactt 1335
| ||||||| |||| |||| |||||||||
Sbjct: 20667925 gtgtagacgtatgcattgacctccaactt 20667953
Score = 103 bits (52), Expect = 5e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 20666569 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 20666628
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 20666629 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 20666688
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 20666689 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 20666748
Query: 493 tccgcagcattgtcttcgttccattgccgcca 524
||| | | |||||||| |||||||| |||||
Sbjct: 20666749 tcctcgcccttgtcttcattccattgtcgcca 20666780
Score = 101 bits (51), Expect = 2e-018
Identities = 256/323 (79%), Gaps = 1/323 (0%)
Strand = Plus / Plus
Query: 1462 tcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactcatgcatgtca 1521
|||||||||||||| || |||||||| |||||| |||| | || |||| | ||||||
Sbjct: 20668775 tcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatgtcg 20668834
Query: 1522 attagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataagcaccgcat 1581
|| || ||| ||||||| ||| || ||| |||||| |||| ||||| ||||| |||
Sbjct: 20668835 atcaggtcgctaccccacagtagacatcctattgtagtcatgtagacataggcaccacat 20668894
Query: 1582 gagcagttgttaaggcagacagttctgcatccaggctcatctcccactgtagatacccaa 1641
||||||||| | ||||| || | |||||||| ||||||| ||| |||||| |||
Sbjct: 20668895 gagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccag 20668954
Query: 1642 tatgagaaatcaggccactttatgtttcccattggaagaaatccatccccagactgattg 1701
||||||||||| |||||||| |||||| || | ||||||||||||||||| || ||
Sbjct: 20668955 tatgagaaatccggccacttgatgtttgg-atagaaagaaatccatccccagtttggttc 20669013
Query: 1702 gtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcctgcattccac 1761
|| |||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 20669014 acctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccac 20669073
Query: 1762 tgctcctgcaacttcggatgaaa 1784
|| || ||||||| || |||||
Sbjct: 20669074 tgatcaagcaactttggctgaaa 20669096
Score = 91.7 bits (46), Expect = 2e-015
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 565 aagctcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacg 624
||||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |
Sbjct: 20666914 aagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaata 20666973
Query: 625 tcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcca 678
|| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 20666974 tcggactttactgagaaaatgccttccatagcatattccggcgacatatagcca 20667027
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 20666477 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 20666536
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 20666537 ttgatttgct 20666546
Score = 73.8 bits (37), Expect = 5e-010
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 685 ccgacgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattcca 744
|||||||| || || ||||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct: 20653621 ccgacgacgcggttggtgttgacctggttctggtcgccgccgaagatcctggccatgccg 20653680
Query: 745 aaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatca 804
|| || || |||||||| |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 20653681 aagtcggagatcttggggttcatgtcgcggtcgaggaggatgttgctggccttgaggtcg 20653740
Query: 805 cggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctc 853
||||| || || || |||||||| || |||||||| || || |||||||
Sbjct: 20653741 cggtgcaccacgcggagcctcgagtcgcggtggaggtacaggagccctc 20653789
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 20653968 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 20654027
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 20654028 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 20654087
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 20654088 atcacctcgttcttgaa 20654104
Score = 58.0 bits (29), Expect = 3e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtc 770
||||||| ||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 24865319 ctccaaagatctttgccatcccaaaatctgcaatcttgggtttcatgtc 24865367
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 931 tctagacttttgttaggcatgtactcatacaccaggatcttctcttc 977
||||||||||||||||||||||| ||||| || || | |||||||||
Sbjct: 24858208 tctagacttttgttaggcatgtattcatagacaagtagcttctcttc 24858254
Score = 54.0 bits (27), Expect = 4e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
|||||||||||||||||||| || || ||||| ||||| ||| ||| ||||| || |||
Sbjct: 19807356 atccttgccattccaaaatccgagattttggggttcatctcccggtcgaggagtatattg 19807297
Query: 790 ctggccttgagatcacggtgaacaactcgca 820
|| || || ||||| | ||||| ||||||||
Sbjct: 19807296 cttgctttcagatccctgtgaataactcgca 19807266
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccagga 781
||||||| | |||||||| ||||| ||||| ||||| || ||||| | |||||||| |
Sbjct: 24857885 ctccaaaaagccttgccaagccaaagtctgaaatcttagggttcatatttgcgtccagta 24857944
Query: 782 gaatgttgctggccttgagatcacggtgaa 811
||| |||||| || || |||||||||||||
Sbjct: 24857945 gaacgttgcttgcttttagatcacggtgaa 24857974
Score = 48.1 bits (24), Expect = 0.026
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtg 809
|||||||| ||||||| |||||| || | |||||||| ||||| |||||||||||
Sbjct: 19983224 atcttggggttcatgttcgcgtctagcaagatgttgctcgccttcagatcacggtg 19983279
Score = 48.1 bits (24), Expect = 0.026
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 778 aggagaatgttgctggccttgagatcacggtg 809
||||| |||||||||||||||||||| |||||
Sbjct: 19875457 aggagtatgttgctggccttgagatcgcggtg 19875426
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2722 gcgccggcgaggagcaggaagaggagccgaggag 2755
|||||||||||||| |||| |||||| |||||||
Sbjct: 23420450 gcgccggcgaggaggaggaggaggaggcgaggag 23420483
Score = 44.1 bits (22), Expect = 0.40
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatc 803
|||||||| |||||||| |||| || || ||||||| ||||||||||||
Sbjct: 20636672 atcttggggttcatgtctccgtcgagcaggatgttgccggccttgagatc 20636721
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1130 tatagacaggaccaaatcctccttctccaagctt 1163
|||| |||| ||||||||| ||||||||||||||
Sbjct: 19969242 tatatacagtaccaaatccgccttctccaagctt 19969209
Score = 44.1 bits (22), Expect = 0.40
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 937 cttttgttaggcatgtactcatacac 962
||||||||||||||||| ||||||||
Sbjct: 19921642 cttttgttaggcatgtattcatacac 19921617
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 291 bits (147), Expect = 1e-075
Identities = 204/223 (91%)
Strand = Plus / Plus
Query: 694 cgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaatctgat 753
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 21824163 cgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaa 21824222
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtgaaca 813
|||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 21824223 atcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaaca 21824282
Query: 814 actcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcgattata 873
||||||| ||| || |||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 21824283 actcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattata 21824342
Query: 874 tcaaaccgtttcttccagtctagaagccgttgcttttcaggat 916
|||||||||||| |||||||||| |||| |||||| |||||||
Sbjct: 21824343 tcaaaccgtttcctccagtctaggagcccttgcttctcaggat 21824385
Score = 268 bits (135), Expect = 1e-068
Identities = 186/203 (91%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 21824471 aagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttct 21824530
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 21824531 ccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 21824590
Query: 1039 atgacctcattcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcaca 1098
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 21824591 atgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacg 21824650
Query: 1099 gctacttcttctcccccaggtaa 1121
|||||||||||||||||||||||
Sbjct: 21824651 gctacttcttctcccccaggtaa 21824673
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 21829310 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 21829369
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 21829370 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 21829429
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 21829430 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 21829489
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 21829490 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 21829549
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 21829550 cgtatccgtc 21829559
Score = 256 bits (129), Expect = 6e-065
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 2113 ttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagcgcgtat 2172
||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 21828984 ttgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtac 21829043
Query: 2173 cgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctccttaggg 2232
||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |||
Sbjct: 21829044 cgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcggagggg 21829103
Query: 2233 cccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcgggtgc 2292
|||||||| |||| ||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 21829104 cccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgc 21829163
Query: 2293 cagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcctgg 2352
|||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 21829164 cagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctgg 21829223
Query: 2353 a 2353
|
Sbjct: 21829224 a 21829224
Score = 200 bits (101), Expect = 3e-048
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 1785 accttttaggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttgg 1844
||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 21826738 accttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgc 21826797
Query: 1845 accacatgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatc 1904
||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 21826798 gccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactc 21826857
Query: 1905 ttgtgaagattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacct 1964
||||| || || |||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 21826858 ttgtgctgacttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacct 21826917
Query: 1965 ctgcaaagaagtgtttgttgcagtgtatgtgta 1997
|||| ||| ||||||| ||||||||| |||||
Sbjct: 21826918 ttgcagagatgtgtttgatgcagtgtaagtgta 21826950
Score = 184 bits (93), Expect = 2e-043
Identities = 180/209 (86%)
Strand = Plus / Plus
Query: 1127 ccatatagacaggaccaaatcctccttctccaagcttgttagagtcactaaaattacttg 1186
||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||| |
Sbjct: 21824788 ccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaag 21824847
Query: 1187 tagcagttcttatacggtccagcgagtacactttgagttcatgactttttccatcctcca 1246
| |||| | |||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 21824848 tggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctg 21824907
Query: 1247 catcatcatcaaaacgaattgactgcgagatgtccagcatagcactattctgctgggatt 1306
|| || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 21824908 tgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatc 21824967
Query: 1307 gggtagacgaatgccttgatctccaactt 1335
| ||||||| |||| |||| |||||||||
Sbjct: 21824968 gtgtagacgtatgcattgacctccaactt 21824996
Score = 109 bits (55), Expect = 8e-021
Identities = 256/323 (79%)
Strand = Plus / Plus
Query: 1462 tcagaagcaggaagcttcaggtttagagtatatgcccctgtttgcaactcatgcatgtca 1521
|||||||||||||| || |||||||| |||||| |||| | || |||| | ||||||
Sbjct: 21825818 tcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatgtcg 21825877
Query: 1522 attagttcgttaccccaggctaggcaccctgttgtagctgtgtaaacataagcaccgcat 1581
|| || ||| ||||||| ||| || ||| |||||| |||| ||||| ||||| |||
Sbjct: 21825878 atcaggtcgctaccccacagtagacatcctattgtagtcatgtagacataggcaccacat 21825937
Query: 1582 gagcagttgttaaggcagacagttctgcatccaggctcatctcccactgtagatacccaa 1641
||||||||| | ||||| || | |||||||| ||||||| ||| |||||| |||
Sbjct: 21825938 gagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccag 21825997
Query: 1642 tatgagaaatcaggccactttatgtttcccattggaagaaatccatccccagactgattg 1701
||||||||||| |||||||| |||||| || | ||||||||||||||||| || ||
Sbjct: 21825998 tatgagaaatccggccacttgatgtttgggatagaaagaaatccatccccagtttggttc 21826057
Query: 1702 gtctcacaacccagaggtgggctcctgatgcaaccttgactccaatttcctgcattccac 1761
|| |||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 21826058 acctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccac 21826117
Query: 1762 tgctcctgcaacttcggatgaaa 1784
|| || ||||||| || |||||
Sbjct: 21826118 tgatcaagcaactttggctgaaa 21826140
Score = 103 bits (52), Expect = 5e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 313 agcatcagcgtaggcggcctcggattaggaaggctcgagctgtcgttgctcagcataagg 372
|||||||| |||||||| || || | |||||||| ||||||||| |||||| ||| ||
Sbjct: 21823612 agcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagt 21823671
Query: 373 atgacagtggggatgtcaggtcgctcatctgcgtgatcttgcacgcacagcaacgcaata 432
||||| | ||||| ||||| || || | || |||||||| || || ||||| |||||
Sbjct: 21823672 atgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatg 21823731
Query: 433 tggatgcatctcagcacctgccgaactgagcacgatgctcttatcactggatcgatcagc 492
||||||||||||| || || |||| |||||||||||||||||||| |||||| |||||
Sbjct: 21823732 tggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagt 21823791
Query: 493 tccgcagcattgtcttcgttccattgccgcca 524
||| | | |||||||| |||||||| |||||
Sbjct: 21823792 tcctcgcccttgtcttcattccattgtcgcca 21823823
Score = 91.7 bits (46), Expect = 2e-015
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 565 aagctcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacg 624
||||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |
Sbjct: 21823957 aagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaata 21824016
Query: 625 tcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcca 678
|| ||||| ||||| |||||||||||||| || ||||| || ||||| ||||||
Sbjct: 21824017 tcggactttactgagaaaatgccttccatagcatattccggcgacatatagcca 21824070
Score = 75.8 bits (38), Expect = 1e-010
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
||||||||||||| |||||||||| |||||| || |||||||||||| | |||||||| |
Sbjct: 21823520 atcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcac 21823579
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 21823580 ttgatttgct 21823589
Score = 73.8 bits (37), Expect = 5e-010
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 685 ccgacgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattcca 744
|||||||| || || ||||||| ||||| ||||| || || || ||||| ||||| ||
Sbjct: 21810666 ccgacgacgcggttggtgttgacctggttctggtcgccgccgaagatcctggccatgccg 21810725
Query: 745 aaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatca 804
|| || || |||||||| |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 21810726 aagtcggagatcttggggttcatgtcgcggtcgaggaggatgttgctggccttgaggtcg 21810785
Query: 805 cggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctc 853
||||| || || || |||||||| || |||||||| || || |||||||
Sbjct: 21810786 cggtgcaccacgcggagcctcgagtcgcggtggaggtacaggagccctc 21810834
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 21811013 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 21811072
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 21811073 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 21811132
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 21811133 atcacctcgttcttgaa 21811149
Score = 58.0 bits (29), Expect = 3e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtc 770
||||||| ||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 26007018 ctccaaagatctttgccatcccaaaatctgcaatcttgggtttcatgtc 26007066
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 931 tctagacttttgttaggcatgtactcatacaccaggatcttctcttc 977
||||||||||||||||||||||| ||||| || || | |||||||||
Sbjct: 25999912 tctagacttttgttaggcatgtattcatagacaagtagcttctcttc 25999958
Score = 54.0 bits (27), Expect = 4e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
|||||||||||||||||||| || || ||||| ||||| ||| ||| ||||| || |||
Sbjct: 20921426 atccttgccattccaaaatccgagattttggggttcatctcccggtcgaggagtatattg 20921367
Query: 790 ctggccttgagatcacggtgaacaactcgca 820
|| || || ||||| | ||||| ||||||||
Sbjct: 20921366 cttgctttcagatccctgtgaataactcgca 20921336
Score = 52.0 bits (26), Expect = 0.002
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 929 catctagacttttgttaggcatgtactcatacaccaggatcttctc 974
||||||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct: 28176824 catctaggcttttgtttggcatgtactcgtacacgagtatcttctc 28176779
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccagga 781
||||||| | |||||||| ||||| ||||| ||||| || ||||| | |||||||| |
Sbjct: 25999589 ctccaaaaagccttgccaagccaaagtctgaaatcttagggttcatatttgcgtccagta 25999648
Query: 782 gaatgttgctggccttgagatcacggtgaa 811
||| |||||| || || |||||||||||||
Sbjct: 25999649 gaacgttgcttgcttttagatcacggtgaa 25999678
Score = 48.1 bits (24), Expect = 0.026
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggtg 809
|||||||| ||||||| |||||| || | |||||||| ||||| |||||||||||
Sbjct: 21102722 atcttggggttcatgttcgcgtctagcaagatgttgctcgccttcagatcacggtg 21102777
Score = 48.1 bits (24), Expect = 0.026
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 778 aggagaatgttgctggccttgagatcacggtg 809
||||| |||||||||||||||||||| |||||
Sbjct: 20994944 aggagtatgttgctggccttgagatcgcggtg 20994913
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2722 gcgccggcgaggagcaggaagaggagccgaggag 2755
|||||||||||||| |||| |||||| |||||||
Sbjct: 24530634 gcgccggcgaggaggaggaggaggaggcgaggag 24530667
Score = 44.1 bits (22), Expect = 0.40
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatc 803
|||||||| |||||||| |||| || || ||||||| ||||||||||||
Sbjct: 21793649 atcttggggttcatgtctccgtcgagcaggatgttgccggccttgagatc 21793698
Score = 44.1 bits (22), Expect = 0.40
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1130 tatagacaggaccaaatcctccttctccaagctt 1163
|||| |||| ||||||||| ||||||||||||||
Sbjct: 21088742 tatatacagtaccaaatccgccttctccaagctt 21088709
Score = 44.1 bits (22), Expect = 0.40
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 937 cttttgttaggcatgtactcatacac 962
||||||||||||||||| ||||||||
Sbjct: 21055129 cttttgttaggcatgtattcatacac 21055104
>gb|CA999435.1|CA999435 S234H_D07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 239
Score = 276 bits (139), Expect = 6e-071
Identities = 214/239 (89%)
Strand = Plus / Minus
Query: 800 gatcacggtgaacaactcgcagcctcgaatcccggtggagatatagcagccctctagcaa 859
||||||| ||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 239 gatcacgatgaacaactcgcaaccttgagtcccggtggagatataacagccctcgagcaa 180
Query: 860 tgccttcgattatatcaaaccgtttcttccagtctagaagccgttgcttttcaggattaa 919
| ||||| |||||||||||||||||| |||||||||| |||| |||||| |||||||| |
Sbjct: 179 tcccttcaattatatcaaaccgtttcctccagtctaggagcccttgcttctcaggattga 120
Query: 920 agaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttccc 979
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
Sbjct: 119 agaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttctc 60
Query: 980 tcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| |||||||||| |||| |||||| ||||||||||| ||||||| ||||| ||||||
Sbjct: 59 cctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagt 1
>gb|CB641433.1|CB641433 OSJNEb01B04.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01B04 5', mRNA sequence
Length = 688
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Minus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 476 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 417
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 416 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 357
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 356 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 297
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 296 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 237
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 236 cgtatccgtc 227
Score = 111 bits (56), Expect = 2e-021
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 2230 gggcccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcggg 2289
||||||||||| |||| ||| ||||||||||||||||||||| |||||||||| ||||
Sbjct: 685 gggcccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacggg 626
Query: 2290 tgccagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcc 2349
||||||||||||||||| || || || | | ||||||||||||||||||| ||||||
Sbjct: 625 tgccagaagctgtcccacagagtgccgtcgtagatgcgcacctcgaggctgccggtgtcc 566
Query: 2350 tgga 2353
||||
Sbjct: 565 tgga 562
>gb|AACV01016536.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016536, whole
genome shotgun sequence
Length = 35393
Score = 258 bits (130), Expect = 1e-065
Identities = 220/250 (88%)
Strand = Plus / Minus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| |||||| || | | |||||||||||||||||| | || |||
Sbjct: 33180 gccgtcgagcacgcggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggt 33121
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 33120 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 33061
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 33060 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 33001
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 33000 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 32941
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 32940 cgtatccgtc 32931
Score = 256 bits (129), Expect = 6e-065
Identities = 213/241 (88%)
Strand = Plus / Minus
Query: 2113 ttgccatctttccagatgtaggcctgaccggagttgcccgggtcgaggccgagcgcgtat 2172
||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 33506 ttgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtac 33447
Query: 2173 cgccccggcgaagggtccgtctcgctggcccaggacgtgaacagcatccgctccttaggg 2232
||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |||
Sbjct: 33446 cgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggctcggagggg 33387
Query: 2233 cccctccctggcgcctgcaaggtgatgcgcatcccggacaggatggtgtccgtcgggtgc 2292
|||||||| |||| ||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 33386 cccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgc 33327
Query: 2293 cagaagctgtcccagagcaccccatcctcgctgcgcacctcgaggctgccagtgtcctgg 2352
|||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 33326 cagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctgg 33267
Query: 2353 a 2353
|
Sbjct: 33266 a 33266
>gb|CX727994.1|CX727994 OSJNEb15O24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15O24 3', mRNA sequence
Length = 293
Score = 250 bits (126), Expect = 4e-063
Identities = 219/250 (87%)
Strand = Plus / Plus
Query: 2445 gccgtcgaggacgcggaggtcgccggtgacggtgagcgtgagcgacggcgaggccgaggt 2504
||||||||| |||||||| || ||| || | | |||||||||||||||||| | || |||
Sbjct: 9 gccgtcgagcacgcggagctccccgttggccgcgagcgtgagcgacggcgacggcgcggt 68
Query: 2505 ggccggcgcgacgcggttggcgacccagacgacggtccgcggcgagatgctgtggtacca 2564
|||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 69 ggccggcgcggcgcggttggcgacccagacgacggttctcggcgagatgctgcggtacca 128
Query: 2565 gatgccgaggtactggcgagaaggctgcttggggtccggcgcgaagaagcccgcctcgaa 2624
|||||||||||| | || || ||| |||| ||||||||||||||||| ||| |||||||
Sbjct: 129 gatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaa 188
Query: 2625 caccccctccggcgaggacaccagcgtcgccgccccggacagcgactccccctgccgcag 2684
||||||| |||||| |||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 189 cacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaa 248
Query: 2685 cgtgtccgtc 2694
||| ||||||
Sbjct: 249 cgtatccgtc 258
>gb|CB658280.1|CB658280 OSJNEc14D08.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14D08 5', mRNA sequence
Length = 403
Score = 208 bits (105), Expect = 1e-050
Identities = 273/329 (82%)
Strand = Plus / Plus
Query: 406 tgatcttgcacgcacagcaacgcaatatggatgcatctcagcacctgccgaactgagcac 465
|||||||| || || || || ||||| ||||||||||||| || || |||| |||||||
Sbjct: 75 tgatcttgaacacataggaatgcaatgtggatgcatctcatgacttgtcgaagtgagcac 134
Query: 466 gatgctcttatcactggatcgatcagctccgcagcattgtcttcgttccattgccgccac 525
||||||||||||| |||||| ||||| ||| | | |||||||| |||||||| |||||
Sbjct: 135 gatgctcttatcaatggatcaatcagttcctcgcccttgtcttcattccattgtcgccat 194
Query: 526 gcatatccagcgatgttcaaggagtcctcgtgacagtggaagctcacagccctctttcct 585
||| |||| || ||||| | |||||| | |||| || ||||||| |||||||||||||
Sbjct: 195 gcaaatcctgcaatgtttagggagtcttgttgaccatgaaagctcaaagccctctttcct 254
Query: 586 gtgatgatctccaagatcaggactccgaagccatagacgtcagacttgactgaaaaaatg 645
|||||||||||||| || || ||||| ||| ||| | || ||||| ||||| ||||||
Sbjct: 255 gtgatgatctccaacattagaactccaaagttataaatatcggactttactgagaaaatg 314
Query: 646 ccttccattgcgtattcaggagacatgtagccaaatgtaccgacgacccgattcgtgttg 705
|||||||| || ||||| || ||||| ||||||||||| || || || ||||||||| ||
Sbjct: 315 ccttccatagcatattccggcgacatatagccaaatgttccaaccacacgattcgtgatg 374
Query: 706 aattggttttggtcccctccaaacatcct 734
||||||||||| |||||||||||||||||
Sbjct: 375 aattggttttgatcccctccaaacatcct 403
>gb|AQ688854.1|AQ688854 nbxb0078O06f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0078O06f, DNA sequence
Length = 732
Score = 127 bits (64), Expect = 3e-026
Identities = 142/168 (84%)
Strand = Plus / Plus
Query: 1168 gagtcactaaaattacttgtagcagttcttatacggtccagcgagtacactttgagttca 1227
|||||||| ||||||| || |||| | |||| ||||| | ||||| ||||||||||||
Sbjct: 4 gagtcactgaaattacaagtggcagcttttatccggtcaaaggagtatactttgagttca 63
Query: 1228 tgactttttccatcctccacatcatcatcaaaacgaattgactgcgagatgtccagcata 1287
||||||||||||||||| || || |||||| |||| |||||||||||||||||||||
Sbjct: 64 tgactttttccatcctctgtgtcgtcttcaaaaggaatcgactgcgagatgtccagcata 123
Query: 1288 gcactattctgctgggattgggtagacgaatgccttgatctccaactt 1335
||||||||||||| ||| | ||||||| |||| |||| |||||||||
Sbjct: 124 ccactattctgctgagatcgtgtagacgtatgcattgacctccaactt 171
>gb|AQ157243.1|AQ157243 nbxb0009K23f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0009K23f, DNA sequence
Length = 625
Score = 123 bits (62), Expect = 5e-025
Identities = 110/126 (87%)
Strand = Plus / Plus
Query: 1210 gagtacactttgagttcatgactttttccatcctccacatcatcatcaaaacgaattgac 1269
||||| ||||||||||||||||||||||||||||| || || |||||| |||| |||
Sbjct: 46 gagtatactttgagttcatgactttttccatcctctgtgtcgtcttcaaaaggaatcgac 105
Query: 1270 tgcgagatgtccagcatagcactattctgctgggattgggtagacgaatgccttgatctc 1329
|||||||||||||||||| ||||||||||||| ||| | ||||||| |||| |||| |||
Sbjct: 106 tgcgagatgtccagcataccactattctgctgagatcgtgtagacgtatgcattgacctc 165
Query: 1330 caactt 1335
||||||
Sbjct: 166 caactt 171
>dbj|AK101616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052G09, full
insert sequence
Length = 3238
Score = 89.7 bits (45), Expect = 8e-015
Identities = 165/205 (80%)
Strand = Plus / Minus
Query: 649 tccattgcgtattcaggagacatgtagccaaatgtaccgacgacccgattcgtgttgaat 708
||||| ||||| || || ||||||||||| | ||| |||||||| || || |||||||
Sbjct: 2327 tccatcgcgtactccggtgacatgtagcccagtgtgccgacgacgcggttggtgttgacc 2268
Query: 709 tggttttggtcccctccaaacatccttgccattccaaaatctgatatcttgggtttcatg 768
||||| ||||| || || || ||||| ||||| || || || || |||||||| ||||||
Sbjct: 2267 tggttctggtcgccgccgaagatcctggccatgccgaagtcggagatcttggggttcatg 2208
Query: 769 tccgcgtccaggagaatgttgctggccttgagatcacggtgaacaactcgcagcctcgaa 828
|| ||| ||||| ||||||||||||||||| || ||||| || || || ||||||||
Sbjct: 2207 tcgcggtcgaggaggatgttgctggccttgaggtcgcggtgcaccacgcggagcctcgag 2148
Query: 829 tcccggtggagatatagcagccctc 853
|| |||||||| || || |||||||
Sbjct: 2147 tcgcggtggaggtacaggagccctc 2123
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2057 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 1998
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 1997 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 1938
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 1937 atcacctcgttcttgaa 1921
>ref|XM_478649.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3237
Score = 89.7 bits (45), Expect = 8e-015
Identities = 165/205 (80%)
Strand = Plus / Minus
Query: 649 tccattgcgtattcaggagacatgtagccaaatgtaccgacgacccgattcgtgttgaat 708
||||| ||||| || || ||||||||||| | ||| |||||||| || || |||||||
Sbjct: 2326 tccatcgcgtactccggtgacatgtagcccagtgtgccgacgacgcggttggtgttgacc 2267
Query: 709 tggttttggtcccctccaaacatccttgccattccaaaatctgatatcttgggtttcatg 768
||||| ||||| || || || ||||| ||||| || || || || |||||||| ||||||
Sbjct: 2266 tggttctggtcgccgccgaagatcctggccatgccgaagtcggagatcttggggttcatg 2207
Query: 769 tccgcgtccaggagaatgttgctggccttgagatcacggtgaacaactcgcagcctcgaa 828
|| ||| ||||| ||||||||||||||||| || ||||| || || || ||||||||
Sbjct: 2206 tcgcggtcgaggaggatgttgctggccttgaggtcgcggtgcaccacgcggagcctcgag 2147
Query: 829 tcccggtggagatatagcagccctc 853
|| |||||||| || || |||||||
Sbjct: 2146 tcgcggtggaggtacaggagccctc 2122
Score = 65.9 bits (33), Expect = 1e-007
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctcttcc 978
|||||||| || || || || ||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2056 aagaggaaggcgtcgaggctcttgttgggcatgtattcgtacaccaggatcttctcctcg 1997
Query: 979 ctcggtatgcagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagt 1038
| | | |||||||| || || | || ||||||||||||||||||| ||| || || ||
Sbjct: 1996 ccctggatgcagcatcccagcaacctgacaagattgcggtgctgcagcttcgcgatcagg 1937
Query: 1039 atgacctcattcttgaa 1055
|| ||||| ||||||||
Sbjct: 1936 atcacctcgttcttgaa 1920
>dbj|AG209581.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE7037_0_504_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE7037, genomic survey sequence
Length = 519
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 440 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 381
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 380 atgttgcttgccttgagatc 361
>dbj|AG210536.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF1030_0_503_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF1030, genomic survey sequence
Length = 431
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 191 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 132
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 131 atgttgcttgccttgagatc 112
>dbj|AB155093.1| Oryza sativa (japonica cultivar-group) DNA, clone:T19026T, 3'
flanking sequence of Tos17 insertion in rice strain
NF1030, genomic survey sequence
Length = 850
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 187 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 128
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 127 atgttgcttgccttgagatc 108
>gb|AACV01020509.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020509, whole
genome shotgun sequence
Length = 8562
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 5621 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 5680
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 5681 atgttgcttgccttgagatc 5700
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1210_A07
Length = 131394
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 87613 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 87672
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 87673 atgttgcttgccttgagatc 87692
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| ||||| |||| |||||||||||||||
Sbjct: 118988 ccaaagatccttgccataccaaagtctgctatcttgggtttcat 119031
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 592 atctccaagatcaggactccgaagccatagacgtcagacttgactgaaaa 641
|||||||||| ||| ||||| || | |||||||||||||||||| |||||
Sbjct: 114277 atctccaagagcagtactccaaaactatagacgtcagacttgacagaaaa 114326
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||| |||||||| || ||||| || || |||| | |||||||
Sbjct: 78186 atccttgccataccaaaatccgatatctttgggttcatctctgcatccaacaaaatgttg 78245
Query: 790 ctggccttgagatc 803
|| ||||| |||||
Sbjct: 78246 cttgccttaagatc 78259
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||| ||| |||||| |||| || || ||||| | ||| ||||| |||
Sbjct: 114503 gccataccaaaatctgctattttgggtctcatttcagcatccagcaaaatattgcttgcc 114562
Query: 796 ttgagatc 803
||||||||
Sbjct: 114563 ttgagatc 114570
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 123603 atcctcgccataccaaagtctgctatcttgggtttcat 123640
Score = 44.1 bits (22), Expect = 0.40
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2518 cggttggcgacccagacgacggtccgcggcgagatgctgtggtaccagatgccgaggt 2575
|||||||||||||| || ||||| ||| | | |||| ||| |||||| ||||||||||
Sbjct: 97954 cggttggcgacccaaaccacggtgcgccgtgggatgttgttgtaccatatgccgaggt 98011
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0489D11
Length = 150757
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 32118 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 32177
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 32178 atgttgcttgccttgagatc 32197
Score = 63.9 bits (32), Expect = 4e-007
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 78225 ccaaagatccttgccatgccaaaatctgctatcttgggtttcat 78268
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||||| |||||||||| |||| || || |||| | || ||||
Sbjct: 107496 atccttgccataccaaaatctgctatcttgggtctcatctctgcatccattaaaacgttg 107555
Query: 790 ctggccttgagatc 803
||||| ||||||||
Sbjct: 107556 ctggctttgagatc 107569
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||| ||||||||
Sbjct: 104487 ccaaagatccttgccatgccaaaatctgctatcttaggtttcat 104444
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| ||||| |||| |||||||||||||||
Sbjct: 63493 ccaaagatccttgccataccaaagtctgctatcttgggtttcat 63536
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 592 atctccaagatcaggactccgaagccatagacgtcagacttgactgaaaa 641
|||||||||| ||| ||||| || | |||||||||||||||||| |||||
Sbjct: 58782 atctccaagagcagtactccaaaactatagacgtcagacttgacagaaaa 58831
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||| |||||||| || ||||| || || |||| | |||||||
Sbjct: 22691 atccttgccataccaaaatccgatatctttgggttcatctctgcatccaacaaaatgttg 22750
Query: 790 ctggccttgagatc 803
|| ||||| |||||
Sbjct: 22751 cttgccttaagatc 22764
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||| ||| |||||| |||| || || ||||| | ||| ||||| |||
Sbjct: 59008 gccataccaaaatctgctattttgggtctcatttcagcatccagcaaaatattgcttgcc 59067
Query: 796 ttgagatc 803
||||||||
Sbjct: 59068 ttgagatc 59075
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 68108 atcctcgccataccaaagtctgctatcttgggtttcat 68145
Score = 44.1 bits (22), Expect = 0.40
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2518 cggttggcgacccagacgacggtccgcggcgagatgctgtggtaccagatgccgaggt 2575
|||||||||||||| || ||||| ||| | | |||| ||| |||||| ||||||||||
Sbjct: 42459 cggttggcgacccaaaccacggtgcgccgtgggatgttgttgtaccatatgccgaggt 42516
>ref|NT_107077.1| Oryza sativa (japonica cultivar-group)
Length = 1516644
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 1364008 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 1364067
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 1364068 atgttgcttgccttgagatc 1364087
Score = 63.9 bits (32), Expect = 4e-007
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 1410115 ccaaagatccttgccatgccaaaatctgctatcttgggtttcat 1410158
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||||| |||||||||| |||| || || |||| | || ||||
Sbjct: 1439386 atccttgccataccaaaatctgctatcttgggtctcatctctgcatccattaaaacgttg 1439445
Query: 790 ctggccttgagatc 803
||||| ||||||||
Sbjct: 1439446 ctggctttgagatc 1439459
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||| ||||||||
Sbjct: 1436377 ccaaagatccttgccatgccaaaatctgctatcttaggtttcat 1436334
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| ||||| |||| |||||||||||||||
Sbjct: 1395383 ccaaagatccttgccataccaaagtctgctatcttgggtttcat 1395426
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 592 atctccaagatcaggactccgaagccatagacgtcagacttgactgaaaa 641
|||||||||| ||| ||||| || | |||||||||||||||||| |||||
Sbjct: 1390672 atctccaagagcagtactccaaaactatagacgtcagacttgacagaaaa 1390721
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||| |||||||| || ||||| || || |||| | |||||||
Sbjct: 1354581 atccttgccataccaaaatccgatatctttgggttcatctctgcatccaacaaaatgttg 1354640
Query: 790 ctggccttgagatc 803
|| ||||| |||||
Sbjct: 1354641 cttgccttaagatc 1354654
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||| ||| |||||| |||| || || ||||| | ||| ||||| |||
Sbjct: 1390898 gccataccaaaatctgctattttgggtctcatttcagcatccagcaaaatattgcttgcc 1390957
Query: 796 ttgagatc 803
||||||||
Sbjct: 1390958 ttgagatc 1390965
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 1399998 atcctcgccataccaaagtctgctatcttgggtttcat 1400035
Score = 44.1 bits (22), Expect = 0.40
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2518 cggttggcgacccagacgacggtccgcggcgagatgctgtggtaccagatgccgaggt 2575
|||||||||||||| || ||||| ||| | | |||| ||| |||||| ||||||||||
Sbjct: 1374349 cggttggcgacccaaaccacggtgcgccgtgggatgttgttgtaccatatgccgaggt 1374406
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 10902074 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 10902133
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 10902134 atgttgcttgccttgagatc 10902153
Score = 63.9 bits (32), Expect = 4e-007
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 10948160 ccaaagatccttgccatgccaaaatctgctatcttgggtttcat 10948203
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||||| |||||||||| |||| || || |||| | || ||||
Sbjct: 10993069 atccttgccataccaaaatctgctatcttgggtctcatctctgcatccattaaaacgttg 10993128
Query: 790 ctggccttgagatc 803
||||| ||||||||
Sbjct: 10993129 ctggctttgagatc 10993142
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||| ||||||||
Sbjct: 10990744 ccaaagatccttgccatgccaaaatctgctatcttaggtttcat 10990701
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| ||||| |||| |||||||||||||||
Sbjct: 10933429 ccaaagatccttgccataccaaagtctgctatcttgggtttcat 10933472
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 592 atctccaagatcaggactccgaagccatagacgtcagacttgactgaaaa 641
|||||||||| ||| ||||| || | |||||||||||||||||| |||||
Sbjct: 10929741 atctccaagagcagtactccaaaactatagacgtcagacttgacagaaaa 10929790
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||| |||||||| || ||||| || || |||| | |||||||
Sbjct: 10893011 atccttgccataccaaaatccgatatctttgggttcatctctgcatccaacaaaatgttg 10893070
Query: 790 ctggccttgagatc 803
|| ||||| |||||
Sbjct: 10893071 cttgccttaagatc 10893084
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 10938044 atcctcgccataccaaagtctgctatcttgggtttcat 10938081
Score = 44.1 bits (22), Expect = 0.40
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2518 cggttggcgacccagacgacggtccgcggcgagatgctgtggtaccagatgccgaggt 2575
|||||||||||||| || ||||| ||| | | |||| ||| |||||| ||||||||||
Sbjct: 10912111 cggttggcgacccaaaccacggtgcgccgtgggatgttgttgtaccatatgccgaggt 10912168
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 20375885 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 20375944
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 20375945 atgttgcttgccttgagatc 20375964
Score = 63.9 bits (32), Expect = 4e-007
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 20421971 ccaaagatccttgccatgccaaaatctgctatcttgggtttcat 20422014
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||||| |||||||||| |||| || || |||| | || ||||
Sbjct: 20466880 atccttgccataccaaaatctgctatcttgggtctcatctctgcatccattaaaacgttg 20466939
Query: 790 ctggccttgagatc 803
||||| ||||||||
Sbjct: 20466940 ctggctttgagatc 20466953
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||| ||||||||
Sbjct: 20464555 ccaaagatccttgccatgccaaaatctgctatcttaggtttcat 20464512
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| ||||| |||| |||||||||||||||
Sbjct: 20407240 ccaaagatccttgccataccaaagtctgctatcttgggtttcat 20407283
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 592 atctccaagatcaggactccgaagccatagacgtcagacttgactgaaaa 641
|||||||||| ||| ||||| || | |||||||||||||||||| |||||
Sbjct: 20403552 atctccaagagcagtactccaaaactatagacgtcagacttgacagaaaa 20403601
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||| |||||||| || ||||| || || |||| | |||||||
Sbjct: 20366822 atccttgccataccaaaatccgatatctttgggttcatctctgcatccaacaaaatgttg 20366881
Query: 790 ctggccttgagatc 803
|| ||||| |||||
Sbjct: 20366882 cttgccttaagatc 20366895
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 20411855 atcctcgccataccaaagtctgctatcttgggtttcat 20411892
Score = 44.1 bits (22), Expect = 0.40
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2518 cggttggcgacccagacgacggtccgcggcgagatgctgtggtaccagatgccgaggt 2575
|||||||||||||| || ||||| ||| | | |||| ||| |||||| ||||||||||
Sbjct: 20385922 cggttggcgacccaaaccacggtgcgccgtgggatgttgttgtaccatatgccgaggt 20385979
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 79.8 bits (40), Expect = 7e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 21470508 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 21470567
Query: 784 atgttgctggccttgagatc 803
|||||||| |||||||||||
Sbjct: 21470568 atgttgcttgccttgagatc 21470587
Score = 63.9 bits (32), Expect = 4e-007
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 21516615 ccaaagatccttgccatgccaaaatctgctatcttgggtttcat 21516658
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||||| |||||||||| |||| || || |||| | || ||||
Sbjct: 21545886 atccttgccataccaaaatctgctatcttgggtctcatctctgcatccattaaaacgttg 21545945
Query: 790 ctggccttgagatc 803
||||| ||||||||
Sbjct: 21545946 ctggctttgagatc 21545959
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||| ||||||||
Sbjct: 21542877 ccaaagatccttgccatgccaaaatctgctatcttaggtttcat 21542834
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| ||||| |||| |||||||||||||||
Sbjct: 21501883 ccaaagatccttgccataccaaagtctgctatcttgggtttcat 21501926
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 592 atctccaagatcaggactccgaagccatagacgtcagacttgactgaaaa 641
|||||||||| ||| ||||| || | |||||||||||||||||| |||||
Sbjct: 21497172 atctccaagagcagtactccaaaactatagacgtcagacttgacagaaaa 21497221
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||| |||||||| || ||||| || || |||| | |||||||
Sbjct: 21461081 atccttgccataccaaaatccgatatctttgggttcatctctgcatccaacaaaatgttg 21461140
Query: 790 ctggccttgagatc 803
|| ||||| |||||
Sbjct: 21461141 cttgccttaagatc 21461154
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||| ||| |||||| |||| || || ||||| | ||| ||||| |||
Sbjct: 21497398 gccataccaaaatctgctattttgggtctcatttcagcatccagcaaaatattgcttgcc 21497457
Query: 796 ttgagatc 803
||||||||
Sbjct: 21497458 ttgagatc 21497465
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 21506498 atcctcgccataccaaagtctgctatcttgggtttcat 21506535
Score = 44.1 bits (22), Expect = 0.40
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2518 cggttggcgacccagacgacggtccgcggcgagatgctgtggtaccagatgccgaggt 2575
|||||||||||||| || ||||| ||| | | |||| ||| |||||| ||||||||||
Sbjct: 21480849 cggttggcgacccaaaccacggtgcgccgtgggatgttgttgtaccatatgccgaggt 21480906
>dbj|AG210537.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF1030_0_504_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF1030, genomic survey sequence
Length = 278
Score = 77.8 bits (39), Expect = 3e-011
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| ||||||||||||||||| || ||||| || || ||||| | |
Sbjct: 187 ccaaagatccttgccatgccaaaatctgatatctttgggttcatttctgcatccagcaaa 128
Query: 784 atgttgctggccttgagat 802
|||||||| ||||||||||
Sbjct: 127 atgttgcttgccttgagat 109
>gb|AQ869810.1|AQ869810 nbeb0036C13f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0036C13f, DNA sequence
Length = 743
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 463 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 410
Score = 58.0 bits (29), Expect = 3e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 723 tccaaacatccttgccattccaaaatctgatatcttgggtt 763
|||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 269 tccaaaaatccttgccataccaaaatctgatattttgggtt 229
>dbj|AK119388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-C04, full
insert sequence
Length = 2776
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 2213 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 2160
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 723 tccaaacatccttgccattccaaaatctgatat 755
|||||| ||||||||||| ||||||||||||||
Sbjct: 2114 tccaaaaatccttgccataccaaaatctgatat 2082
>gb|AACV01010532.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010532, whole
genome shotgun sequence
Length = 48647
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 19343 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 19396
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 29181 gtcagacttgacagagaagatgccttccattgcatattcaggagacatgta 29231
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 8997 gtcagacttgacagaaaagattccttccattgcatattcaggagacatgta 9047
Score = 56.0 bits (28), Expect = 1e-004
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| |||||||||||||| ||||| |||| ||| | |||| | |
Sbjct: 29385 ccaaagatccttgccataccaaaatctgatattttggggctcatctcctcatccaataaa 29444
Query: 784 atgttgctggccttgagatc 803
|| |||||||| ||||||||
Sbjct: 29445 atattgctggctttgagatc 29464
Score = 54.0 bits (27), Expect = 4e-004
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 32888 gtcagacttgacagagaagatgccttccattgcata-tcaggagacatgta 32937
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 721 cctccaaacatccttgccattccaaaatctgatatctt 758
|||||||| || |||||||| |||||||||||||||||
Sbjct: 34834 cctccaaagattcttgccataccaaaatctgatatctt 34871
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 723 tccaaacatccttgccattccaaaatctgatat 755
|||||| ||||||||||| ||||||||||||||
Sbjct: 19537 tccaaaaatccttgccataccaaaatctgatat 19569
Score = 50.1 bits (25), Expect = 0.007
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 725 caaacatccttgccattccaaaatctgatatcttggg 761
|||| ||||||||||| |||||||||||||| |||||
Sbjct: 14417 caaagatccttgccatcccaaaatctgatattttggg 14453
Score = 48.1 bits (24), Expect = 0.026
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 631 ttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 34670 ttgactgaaaaggcgccatccattgcatattcaggagacatgta 34713
Score = 46.1 bits (23), Expect = 0.10
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 14225 gtcagacttgacagaaaaggagccttccaaagcatattcaggagacatgta 14275
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttggg 761
||||| ||||||| ||| |||||||||||||| |||||
Sbjct: 33086 ccaaagatccttgtcatgccaaaatctgatattttggg 33123
>ref|NT_107200.1| Oryza sativa (japonica cultivar-group)
Length = 1324591
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 1036931 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 1036984
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 1082218 gtcagacttgactgaaaagaccccatccattgcgtattcaggagacatgta 1082268
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 1046768 gtcagacttgacagagaagatgccttccattgcatattcaggagacatgta 1046818
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 1026590 gtcagacttgacagaaaagattccttccattgcatattcaggagacatgta 1026640
Score = 61.9 bits (31), Expect = 2e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 1094024 gacttgactgaaaaggtgccttccattgcatattcaggtgacatgta 1093978
Score = 56.0 bits (28), Expect = 1e-004
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| |||||||||||||| ||||| |||| ||| | |||| | |
Sbjct: 1046972 ccaaagatccttgccataccaaaatctgatattttggggctcatctcctcatccaataaa 1047031
Query: 784 atgttgctggccttgagatc 803
|| |||||||| ||||||||
Sbjct: 1047032 atattgctggctttgagatc 1047051
Score = 54.0 bits (27), Expect = 4e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || ||||||||||| || |||||||| ||||||||
Sbjct: 1097749 gtcagacttgacagagaagatgccttccatcgcatattcaggtgacatgta 1097799
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 1075992 gacttgactgaaaaggcgccatccattgcatattcaggagacatgta 1076038
Score = 54.0 bits (27), Expect = 4e-004
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 1050474 gtcagacttgacagagaagatgccttccattgcata-tcaggagacatgta 1050523
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 721 cctccaaacatccttgccattccaaaatctgatatctt 758
|||||||| || |||||||| |||||||||||||||||
Sbjct: 1052420 cctccaaagattcttgccataccaaaatctgatatctt 1052457
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 723 tccaaacatccttgccattccaaaatctgatat 755
|||||| ||||||||||| ||||||||||||||
Sbjct: 1037125 tccaaaaatccttgccataccaaaatctgatat 1037157
Score = 50.1 bits (25), Expect = 0.007
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 725 caaacatccttgccattccaaaatctgatatcttggg 761
|||| ||||||||||| |||||||||||||| |||||
Sbjct: 1032005 caaagatccttgccatcccaaaatctgatattttggg 1032041
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||||||| ||||| |||| ||| | |||| | ||||||||||||
Sbjct: 1097960 gccataccaaaatctgatattttggggctcatctcctcatccaataaaatgttgctggct 1098019
Query: 796 ttgagatc 803
||||||||
Sbjct: 1098020 ttgagatc 1098027
Score = 48.1 bits (24), Expect = 0.026
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 631 ttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 1052256 ttgactgaaaaggcgccatccattgcatattcaggagacatgta 1052299
Score = 46.1 bits (23), Expect = 0.10
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 1031814 gtcagacttgacagaaaaggagccttccaaagcatattcaggagacatgta 1031864
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttggg 761
||||| ||||||| ||| |||||||||||||| |||||
Sbjct: 1050672 ccaaagatccttgtcatgccaaaatctgatattttggg 1050709
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 9923724 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 9923777
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 9971514 gtcagacttgactgaaaagaccccatccattgcgtattcaggagacatgta 9971564
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 9933562 gtcagacttgacagagaagatgccttccattgcatattcaggagacatgta 9933612
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 9913378 gtcagacttgacagaaaagattccttccattgcatattcaggagacatgta 9913428
Score = 61.9 bits (31), Expect = 2e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 9983312 gacttgactgaaaaggtgccttccattgcatattcaggtgacatgta 9983266
Score = 56.0 bits (28), Expect = 1e-004
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| |||||||||||||| ||||| |||| ||| | |||| | |
Sbjct: 9933766 ccaaagatccttgccataccaaaatctgatattttggggctcatctcctcatccaataaa 9933825
Query: 784 atgttgctggccttgagatc 803
|| |||||||| ||||||||
Sbjct: 9933826 atattgctggctttgagatc 9933845
Score = 54.0 bits (27), Expect = 4e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || ||||||||||| || |||||||| ||||||||
Sbjct: 9987037 gtcagacttgacagagaagatgccttccatcgcatattcaggtgacatgta 9987087
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 9965288 gacttgactgaaaaggcgccatccattgcatattcaggagacatgta 9965334
Score = 54.0 bits (27), Expect = 4e-004
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 9937269 gtcagacttgacagagaagatgccttccattgcata-tcaggagacatgta 9937318
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 721 cctccaaacatccttgccattccaaaatctgatatctt 758
|||||||| || |||||||| |||||||||||||||||
Sbjct: 9939215 cctccaaagattcttgccataccaaaatctgatatctt 9939252
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 723 tccaaacatccttgccattccaaaatctgatat 755
|||||| ||||||||||| ||||||||||||||
Sbjct: 9923918 tccaaaaatccttgccataccaaaatctgatat 9923950
Score = 50.1 bits (25), Expect = 0.007
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 725 caaacatccttgccattccaaaatctgatatcttggg 761
|||| ||||||||||| |||||||||||||| |||||
Sbjct: 9918798 caaagatccttgccatcccaaaatctgatattttggg 9918834
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||||||| ||||| |||| ||| | |||| | ||||||||||||
Sbjct: 9987248 gccataccaaaatctgatattttggggctcatctcctcatccaataaaatgttgctggct 9987307
Query: 796 ttgagatc 803
||||||||
Sbjct: 9987308 ttgagatc 9987315
Score = 48.1 bits (24), Expect = 0.026
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 631 ttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 9939051 ttgactgaaaaggcgccatccattgcatattcaggagacatgta 9939094
Score = 46.1 bits (23), Expect = 0.10
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 9918606 gtcagacttgacagaaaaggagccttccaaagcatattcaggagacatgta 9918656
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttggg 761
||||| ||||||| ||| |||||||||||||| |||||
Sbjct: 9937467 ccaaagatccttgtcatgccaaaatctgatattttggg 9937504
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 29067823 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 29067876
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 29115613 gtcagacttgactgaaaagaccccatccattgcgtattcaggagacatgta 29115663
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 29077661 gtcagacttgacagagaagatgccttccattgcatattcaggagacatgta 29077711
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 29057477 gtcagacttgacagaaaagattccttccattgcatattcaggagacatgta 29057527
Score = 61.9 bits (31), Expect = 2e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 29127411 gacttgactgaaaaggtgccttccattgcatattcaggtgacatgta 29127365
Score = 56.0 bits (28), Expect = 1e-004
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| |||||||||||||| ||||| |||| ||| | |||| | |
Sbjct: 29077865 ccaaagatccttgccataccaaaatctgatattttggggctcatctcctcatccaataaa 29077924
Query: 784 atgttgctggccttgagatc 803
|| |||||||| ||||||||
Sbjct: 29077925 atattgctggctttgagatc 29077944
Score = 54.0 bits (27), Expect = 4e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || ||||||||||| || |||||||| ||||||||
Sbjct: 29131136 gtcagacttgacagagaagatgccttccatcgcatattcaggtgacatgta 29131186
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 29109387 gacttgactgaaaaggcgccatccattgcatattcaggagacatgta 29109433
Score = 54.0 bits (27), Expect = 4e-004
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 29081368 gtcagacttgacagagaagatgccttccattgcata-tcaggagacatgta 29081417
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 721 cctccaaacatccttgccattccaaaatctgatatctt 758
|||||||| || |||||||| |||||||||||||||||
Sbjct: 29083314 cctccaaagattcttgccataccaaaatctgatatctt 29083351
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 723 tccaaacatccttgccattccaaaatctgatat 755
|||||| ||||||||||| ||||||||||||||
Sbjct: 29068017 tccaaaaatccttgccataccaaaatctgatat 29068049
Score = 50.1 bits (25), Expect = 0.007
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 725 caaacatccttgccattccaaaatctgatatcttggg 761
|||| ||||||||||| |||||||||||||| |||||
Sbjct: 29062897 caaagatccttgccatcccaaaatctgatattttggg 29062933
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||||||| ||||| |||| ||| | |||| | ||||||||||||
Sbjct: 29131347 gccataccaaaatctgatattttggggctcatctcctcatccaataaaatgttgctggct 29131406
Query: 796 ttgagatc 803
||||||||
Sbjct: 29131407 ttgagatc 29131414
Score = 48.1 bits (24), Expect = 0.026
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 631 ttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 29083150 ttgactgaaaaggcgccatccattgcatattcaggagacatgta 29083193
Score = 46.1 bits (23), Expect = 0.10
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 29062705 gtcagacttgacagaaaaggagccttccaaagcatattcaggagacatgta 29062755
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttggg 761
||||| ||||||| ||| |||||||||||||| |||||
Sbjct: 29081566 ccaaagatccttgtcatgccaaaatctgatattttggg 29081603
Score = 44.1 bits (22), Expect = 0.40
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 2145 gttgcccgggtcgaggccgagc 2166
||||||||||||||||||||||
Sbjct: 18883653 gttgcccgggtcgaggccgagc 18883632
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13,
complete sequence
Length = 127135
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 114147 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 114200
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 123984 gtcagacttgacagagaagatgccttccattgcatattcaggagacatgta 124034
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 103805 gtcagacttgacagaaaagattccttccattgcatattcaggagacatgta 103855
Score = 56.0 bits (28), Expect = 1e-004
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| |||||||||||||| ||||| |||| ||| | |||| | |
Sbjct: 124188 ccaaagatccttgccataccaaaatctgatattttggggctcatctcctcatccaataaa 124247
Query: 784 atgttgctggccttgagatc 803
|| |||||||| ||||||||
Sbjct: 124248 atattgctggctttgagatc 124267
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 723 tccaaacatccttgccattccaaaatctgatat 755
|||||| ||||||||||| ||||||||||||||
Sbjct: 114341 tccaaaaatccttgccataccaaaatctgatat 114373
Score = 50.1 bits (25), Expect = 0.007
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 725 caaacatccttgccattccaaaatctgatatcttggg 761
|||| ||||||||||| |||||||||||||| |||||
Sbjct: 109221 caaagatccttgccatcccaaaatctgatattttggg 109257
Score = 46.1 bits (23), Expect = 0.10
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 109029 gtcagacttgacagaaaaggagccttccaaagcatattcaggagacatgta 109079
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 75.8 bits (38), Expect = 1e-010
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagcc 677
|||||| |||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 32218458 gtcagatttgactgaaaaaatgccttccattgcatattcaggtgccatgtagcc 32218511
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 32263746 gtcagacttgactgaaaagaccccatccattgcgtattcaggagacatgta 32263796
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 32228295 gtcagacttgacagagaagatgccttccattgcatattcaggagacatgta 32228345
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 32208116 gtcagacttgacagaaaagattccttccattgcatattcaggagacatgta 32208166
Score = 61.9 bits (31), Expect = 2e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 32275548 gacttgactgaaaaggtgccttccattgcatattcaggtgacatgta 32275502
Score = 56.0 bits (28), Expect = 1e-004
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| ||||||||||| |||||||||||||| ||||| |||| ||| | |||| | |
Sbjct: 32228499 ccaaagatccttgccataccaaaatctgatattttggggctcatctcctcatccaataaa 32228558
Query: 784 atgttgctggccttgagatc 803
|| |||||||| ||||||||
Sbjct: 32228559 atattgctggctttgagatc 32228578
Score = 54.0 bits (27), Expect = 4e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || ||||||||||| || |||||||| ||||||||
Sbjct: 32279273 gtcagacttgacagagaagatgccttccatcgcatattcaggtgacatgta 32279323
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 32257520 gacttgactgaaaaggcgccatccattgcatattcaggagacatgta 32257566
Score = 54.0 bits (27), Expect = 4e-004
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 32232002 gtcagacttgacagagaagatgccttccattgcata-tcaggagacatgta 32232051
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 721 cctccaaacatccttgccattccaaaatctgatatctt 758
|||||||| || |||||||| |||||||||||||||||
Sbjct: 32233948 cctccaaagattcttgccataccaaaatctgatatctt 32233985
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 723 tccaaacatccttgccattccaaaatctgatat 755
|||||| ||||||||||| ||||||||||||||
Sbjct: 32218652 tccaaaaatccttgccataccaaaatctgatat 32218684
Score = 50.1 bits (25), Expect = 0.007
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 725 caaacatccttgccattccaaaatctgatatcttggg 761
|||| ||||||||||| |||||||||||||| |||||
Sbjct: 32213532 caaagatccttgccatcccaaaatctgatattttggg 32213568
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||||||| ||||| |||| ||| | |||| | ||||||||||||
Sbjct: 32279484 gccataccaaaatctgatattttggggctcatctcctcatccaataaaatgttgctggct 32279543
Query: 796 ttgagatc 803
||||||||
Sbjct: 32279544 ttgagatc 32279551
Score = 48.1 bits (24), Expect = 0.026
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 631 ttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 32233784 ttgactgaaaaggcgccatccattgcatattcaggagacatgta 32233827
Score = 46.1 bits (23), Expect = 0.10
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 32213340 gtcagacttgacagaaaaggagccttccaaagcatattcaggagacatgta 32213390
Score = 46.1 bits (23), Expect = 0.10
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| |||||| ||| |||| || |||||||||||||||||
Sbjct: 8431391 gtcagacttgacggaaaaatagccatccaaagcatattcaggagacatgta 8431441
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttggg 761
||||| ||||||| ||| |||||||||||||| |||||
Sbjct: 32232200 ccaaagatccttgtcatgccaaaatctgatattttggg 32232237
Score = 44.1 bits (22), Expect = 0.40
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 2145 gttgcccgggtcgaggccgagc 2166
||||||||||||||||||||||
Sbjct: 21759907 gttgcccgggtcgaggccgagc 21759886
>gb|AACV01010533.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010533, whole
genome shotgun sequence
Length = 32832
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 24347 gtcagacttgactgaaaagaccccatccattgcgtattcaggagacatgta 24297
Score = 61.9 bits (31), Expect = 2e-006
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 12549 gacttgactgaaaaggtgccttccattgcatattcaggtgacatgta 12595
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 30573 gacttgactgaaaaggcgccatccattgcatattcaggagacatgta 30527
Score = 54.0 bits (27), Expect = 4e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || ||||||||||| || |||||||| ||||||||
Sbjct: 8824 gtcagacttgacagagaagatgccttccatcgcatattcaggtgacatgta 8774
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||||||| ||||| |||| ||| | |||| | ||||||||||||
Sbjct: 8613 gccataccaaaatctgatattttggggctcatctcctcatccaataaaatgttgctggct 8554
Query: 796 ttgagatc 803
||||||||
Sbjct: 8553 ttgagatc 8546
>ref|XM_474009.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2445
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 2049 gtcagacttgactgaaaagaccccatccattgcgtattcaggagacatgta 1999
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09,
complete sequence
Length = 159502
Score = 69.9 bits (35), Expect = 7e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 33325 gtcagacttgactgaaaagaccccatccattgcgtattcaggagacatgta 33375
Score = 61.9 bits (31), Expect = 2e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 45131 gacttgactgaaaaggtgccttccattgcatattcaggtgacatgta 45085
Score = 54.0 bits (27), Expect = 4e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || ||||||||||| || |||||||| ||||||||
Sbjct: 48856 gtcagacttgacagagaagatgccttccatcgcatattcaggtgacatgta 48906
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 27099 gacttgactgaaaaggcgccatccattgcatattcaggagacatgta 27145
Score = 54.0 bits (27), Expect = 4e-004
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 1581 gtcagacttgacagagaagatgccttccattgcata-tcaggagacatgta 1630
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 721 cctccaaacatccttgccattccaaaatctgatatctt 758
|||||||| || |||||||| |||||||||||||||||
Sbjct: 3527 cctccaaagattcttgccataccaaaatctgatatctt 3564
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||||||| ||||| |||| ||| | |||| | ||||||||||||
Sbjct: 49067 gccataccaaaatctgatattttggggctcatctcctcatccaataaaatgttgctggct 49126
Query: 796 ttgagatc 803
||||||||
Sbjct: 49127 ttgagatc 49134
Score = 48.1 bits (24), Expect = 0.026
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 631 ttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 3363 ttgactgaaaaggcgccatccattgcatattcaggagacatgta 3406
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttggg 761
||||| ||||||| ||| |||||||||||||| |||||
Sbjct: 1779 ccaaagatccttgtcatgccaaaatctgatattttggg 1816
>dbj|AG207794.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE0004_0_105_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE0004, genomic survey sequence
Length = 99
Score = 63.9 bits (32), Expect = 4e-007
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 43 ccaaagatccttgccatgccaaaatctgctatcttgggtttcat 86
>gb|AACV01020515.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020515, whole
genome shotgun sequence
Length = 39253
Score = 63.9 bits (32), Expect = 4e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 20951 ccaaagatccttgccatgccaaaatctgctatcttgggtttcat 20908
Score = 56.0 bits (28), Expect = 1e-004
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| ||||| |||| |||||||||||||||
Sbjct: 35682 ccaaagatccttgccataccaaagtctgctatcttgggtttcat 35639
Score = 44.1 bits (22), Expect = 0.40
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 31067 atcctcgccataccaaagtctgctatcttgggtttcat 31030
>ref|XM_474011.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2484
Score = 63.9 bits (32), Expect = 4e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagccaaatgt 683
|||||||||||||| ||||||||||||| |||||||| |||||||| ||| ||||
Sbjct: 2078 gacttgactgaaaaggtgccttccattgcatattcaggtgacatgtaaccatatgt 2023
>gb|AZ133063.1|AZ133063 OSJNBb0108M18f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0108M18f, DNA
sequence
Length = 761
Score = 61.9 bits (31), Expect = 2e-006
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| || || |||||||||||||| |||||| ||||||||||
Sbjct: 514 gtcagacttgacagagaagatgccttccattgcatattcaagagacatgta 564
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
OSJNBb0031H05, complete sequence
Length = 141200
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||||| |||||||||| |||| || || |||| | || ||||
Sbjct: 2512 atccttgccataccaaaatctgctatcttgggtctcatctctgcatccattaaaacgttg 2571
Query: 790 ctggccttgagatc 803
||||| ||||||||
Sbjct: 2572 ctggctttgagatc 2585
>gb|AACV01020518.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020518, whole
genome shotgun sequence
Length = 34592
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 730 atccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttg 789
||||||||||| |||||||||| |||||||||| |||| || || |||| | || ||||
Sbjct: 1928 atccttgccataccaaaatctgctatcttgggtctcatctctgcatccattaaaacgttg 1987
Query: 790 ctggccttgagatc 803
||||| ||||||||
Sbjct: 1988 ctggctttgagatc 2001
>ref|XM_474012.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2469
Score = 60.0 bits (30), Expect = 7e-006
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagccaaatgt 683
|||||||||||| || || ||||||||||| || |||||||| |||||||| ||| ||||
Sbjct: 2070 gtcagacttgacagagaagatgccttccatcgcatattcaggtgacatgtaaccatatgt 2011
Query: 684 accgac 689
|||||
Sbjct: 2010 cccgac 2005
Score = 48.1 bits (24), Expect = 0.026
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 736 gccattccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggcc 795
||||| |||||||||||||| ||||| |||| ||| | |||| | ||||||||||||
Sbjct: 1958 gccataccaaaatctgatattttggggctcatctcctcatccaataaaatgttgctggct 1899
Query: 796 ttgagatc 803
||||||||
Sbjct: 1898 ttgagatc 1891
>dbj|AK111564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N09, full
insert sequence
Length = 2343
Score = 58.0 bits (29), Expect = 3e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtc 770
||||||| ||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 1535 ctccaaagatctttgccatcccaaaatctgcaatcttgggtttcatgtc 1487
>gb|AACV01016835.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016835, whole
genome shotgun sequence
Length = 11675
Score = 58.0 bits (29), Expect = 3e-005
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtc 770
||||||| ||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 9931 ctccaaagatctttgccatcccaaaatctgcaatcttgggtttcatgtc 9979
Score = 54.0 bits (27), Expect = 4e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 931 tctagacttttgttaggcatgtactcatacaccaggatcttctcttc 977
||||||||||||||||||||||| ||||| || || | |||||||||
Sbjct: 2820 tctagacttttgttaggcatgtattcatagacaagtagcttctcttc 2866
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 722 ctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccagga 781
||||||| | |||||||| ||||| ||||| ||||| || ||||| | |||||||| |
Sbjct: 2497 ctccaaaaagccttgccaagccaaagtctgaaatcttagggttcatatttgcgtccagta 2556
Query: 782 gaatgttgctggccttgagatcacggtgaa 811
||| |||||| || || |||||||||||||
Sbjct: 2557 gaacgttgcttgcttttagatcacggtgaa 2586
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,142,301
Number of Sequences: 438736
Number of extensions: 4142301
Number of successful extensions: 11403
Number of sequences better than 0.5: 197
Number of HSP's better than 0.5 without gapping: 203
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 9398
Number of HSP's gapped (non-prelim): 1942
length of query: 2766
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2744
effective length of database: 2,790,767,724
effective search space: 7657866634656
effective search space used: 7657866634656
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)