BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750912.2.1
(1095 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA... 664 0.0
ref|NM_189992.1| Oryza sativa (japonica cultivar-group), p... 664 0.0
gb|CB662485.1|CB662485 OSJNEd06I21.f OSJNEd Oryza sativa (j... 658 0.0
gb|CF303595.1|CF303595 ABF1--02-L06.g1 ABF3-overexpressing ... 585 e-164
gb|CF323190.1|CF323190 HDN--03-C17.g1 OsHDAC1-overexpressin... 438 e-120
gb|CB636812.1|CB636812 OSJNEa02L16.f OSJNEa Oryza sativa (j... 424 e-116
gb|CB683998.1|CB683998 OSJNEf13B19.f OSJNEf Oryza sativa (j... 400 e-109
gb|CB662100.1|CB662100 OSJNEd05M17.f OSJNEd Oryza sativa (j... 224 8e-056
dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA... 194 7e-047
emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA ... 186 2e-044
dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA... 186 2e-044
gb|AU068000.1|AU068000 AU068000 Rice callus Oryza sativa (j... 167 2e-038
gb|CF307118.1|CF307118 HDA1--05-M22.g1 OsHDAC1-overexpressi... 167 2e-038
gb|CF306138.1|CF306138 HDA1--02-M21.g1 OsHDAC1-overexpressi... 155 6e-035
gb|CF326153.1|CF326153 JMT1--05-D24.g1 AtJMT-overexpressing... 153 2e-034
gb|AACV01002980.1| Oryza sativa (japonica cultivar-group) c... 153 2e-034
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 153 2e-034
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 153 2e-034
dbj|AP004332.3| Oryza sativa (japonica cultivar-group) geno... 153 2e-034
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 153 2e-034
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 153 2e-034
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 153 2e-034
dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA... 133 2e-028
dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA... 133 2e-028
gb|CF303832.1|CF303832 ABF1--03-F11.g1 ABF3-overexpressing ... 129 3e-027
gb|CF304553.1|CF304553 ABF1--05-E20.g1 ABF3-overexpressing ... 129 3e-027
gb|CF304781.1|CF304781 ABF1--05-O21.g1 ABF3-overexpressing ... 129 3e-027
gb|CB647657.1|CB647657 OSJNEb10K20.f OSJNEb Oryza sativa (j... 127 1e-026
gb|CF304214.1|CF304214 ABF1--04-F24.g1 ABF3-overexpressing ... 113 2e-022
gb|AC109645.3| Oryza sativa (japonica cultivar-group) chrom... 113 2e-022
ref|NT_107088.1| Oryza sativa (japonica cultivar-group) chr... 113 2e-022
gb|AC134926.3| Oryza sativa (japonica cultivar-group) chrom... 113 2e-022
gb|AC150702.2| Oryza sativa (japonica cultivar-group) chrom... 113 2e-022
gb|AACV01023253.1| Oryza sativa (japonica cultivar-group) c... 113 2e-022
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 113 2e-022
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 113 2e-022
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 113 2e-022
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 113 2e-022
gb|CF326332.1|CF326332 JMT1--05-M08.g1 AtJMT-overexpressing... 96 5e-017
emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC O... 80 3e-012
gb|AACV01024881.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 80 3e-012
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|C25840.1|C25840 C25840 Rice callus cDNA Oryza sativa (ja... 64 2e-007
gb|C97649.1|C97649 C97649 Rice callus Oryza sativa (japonic... 62 7e-007
dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
ref|XM_466220.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
gb|AU030910.2|AU030910 AU030910 Rice cDNA from immature lea... 44 0.16
dbj|AK064007.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK102521.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
gb|AACV01000533.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
ref|NM_188673.1| Oryza sativa (japonica cultivar-group), Oz... 44 0.16
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 44 0.16
dbj|AP001539.1| Oryza sativa (japonica cultivar-group) geno... 44 0.16
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
insert sequence
Length = 3151
Score = 664 bits (335), Expect = 0.0
Identities = 696/815 (85%), Gaps = 6/815 (0%)
Strand = Plus / Plus
Query: 1 gatctgcatggcatggagtggcgattccgccacatcttccgcgggcaacccaggaggcat 60
|||||||| ||||||| ||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 724 gatctgcacagcatggactggcgcttccgtcacatctttcgcgggcaaccgaggaggcat 783
Query: 61 ctccttcagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 784 ctccttcagagtggttggagtgtgtttgtcagttccaaaaggcttgttgctggggatgct 843
Query: 121 ttcattttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgagg 180
|||||||||||||||||||| || |||||||| || ||||||||||| || |||||||||
Sbjct: 844 ttcattttcctcagaggagagaatggtgaactccgtgttggtgttagacgagctatgagg 903
Query: 181 cagttgtctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttctt 240
||| |||| ||||| |||||||| || |||||||||||||||||||| || || || |||
Sbjct: 904 cagctgtccaatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtcctt 963
Query: 241 gcgactgcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
|| ||||||||||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 964 gctactgcatggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 1023
Query: 301 acgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaat 360
||||||||||||||||| || || ||||||||||| ||||||||||| || |||||||||
Sbjct: 1024 acgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaacaat 1083
Query: 361 tattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagcagagg 420
|| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||||||
Sbjct: 1084 tactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagcagagg 1143
Query: 421 tttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagttgg 480
||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || ||||||
Sbjct: 1144 tttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagttgg 1203
Query: 481 agatacttgaaggtgcgctgggatgagccttctactatcccgcggccagataaggtctct 540
|||| | |||||||||| |||||||| || || ||||| ||||||||||||| ||||||
Sbjct: 1204 agatccctgaaggtgcggtgggatgaaccatcaactattccgcggccagatagagtctct 1263
Query: 541 ccctggaagatagagcctgcttcatcacctcctgttaatcctctccctctttctagagga 600
|| ||||| ||||||||||||||||||||||||||||| || || ||||||||||| |
Sbjct: 1264 ccttggaaaatagagcctgcttcatcacctcctgttaacccccttcctctttctagggtt 1323
Query: 601 aaaagacctagacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaa 660
||||||||||| | |||||| |||||| | || |||||||| || |||| || ||||||
Sbjct: 1324 aaaagacctaggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaa 1383
Query: 661 ggtgcaaccaagattgatactgattctgctcaaacaccac---atcaaaa---ttcggtc 714
| ||| || ||| |||| |||||| |||||||| ||| || |||||| | |||||
Sbjct: 1384 gctgctactaaggttgacactgatcctgctcaagcacaacgaagtcaaaacagtacggtc 1443
Query: 715 ttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgactctgat 774
|||||| ||||||| || |||| ||| |||| |||||| ||||| || | |||||||||
Sbjct: 1444 ttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgactctgat 1503
Query: 775 tccactgttcagaagcagatgatgtggtccccatc 809
||||| ||| |||| ||||||||||| |||||
Sbjct: 1504 gtcactgctcataagccaatgatgtggtctccatc 1538
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 1570 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 1629
Query: 895 aaggatg 901
|||||||
Sbjct: 1630 aaggatg 1636
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2481
Score = 664 bits (335), Expect = 0.0
Identities = 696/815 (85%), Gaps = 6/815 (0%)
Strand = Plus / Plus
Query: 1 gatctgcatggcatggagtggcgattccgccacatcttccgcgggcaacccaggaggcat 60
|||||||| ||||||| ||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 502 gatctgcacagcatggactggcgcttccgtcacatctttcgcgggcaaccgaggaggcat 561
Query: 61 ctccttcagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 562 ctccttcagagtggttggagtgtgtttgtcagttccaaaaggcttgttgctggggatgct 621
Query: 121 ttcattttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgagg 180
|||||||||||||||||||| || |||||||| || ||||||||||| || |||||||||
Sbjct: 622 ttcattttcctcagaggagagaatggtgaactccgtgttggtgttagacgagctatgagg 681
Query: 181 cagttgtctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttctt 240
||| |||| ||||| |||||||| || |||||||||||||||||||| || || || |||
Sbjct: 682 cagctgtccaatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtcctt 741
Query: 241 gcgactgcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
|| ||||||||||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 742 gctactgcatggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 801
Query: 301 acgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaat 360
||||||||||||||||| || || ||||||||||| ||||||||||| || |||||||||
Sbjct: 802 acgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaacaat 861
Query: 361 tattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagcagagg 420
|| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||||||
Sbjct: 862 tactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagcagagg 921
Query: 421 tttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagttgg 480
||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || ||||||
Sbjct: 922 tttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagttgg 981
Query: 481 agatacttgaaggtgcgctgggatgagccttctactatcccgcggccagataaggtctct 540
|||| | |||||||||| |||||||| || || ||||| ||||||||||||| ||||||
Sbjct: 982 agatccctgaaggtgcggtgggatgaaccatcaactattccgcggccagatagagtctct 1041
Query: 541 ccctggaagatagagcctgcttcatcacctcctgttaatcctctccctctttctagagga 600
|| ||||| ||||||||||||||||||||||||||||| || || ||||||||||| |
Sbjct: 1042 ccttggaaaatagagcctgcttcatcacctcctgttaacccccttcctctttctagggtt 1101
Query: 601 aaaagacctagacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaa 660
||||||||||| | |||||| |||||| | || |||||||| || |||| || ||||||
Sbjct: 1102 aaaagacctaggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaa 1161
Query: 661 ggtgcaaccaagattgatactgattctgctcaaacaccac---atcaaaa---ttcggtc 714
| ||| || ||| |||| |||||| |||||||| ||| || |||||| | |||||
Sbjct: 1162 gctgctactaaggttgacactgatcctgctcaagcacaacgaagtcaaaacagtacggtc 1221
Query: 715 ttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgactctgat 774
|||||| ||||||| || |||| ||| |||| |||||| ||||| || | |||||||||
Sbjct: 1222 ttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgactctgat 1281
Query: 775 tccactgttcagaagcagatgatgtggtccccatc 809
||||| ||| |||| ||||||||||| |||||
Sbjct: 1282 gtcactgctcataagccaatgatgtggtctccatc 1316
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 1348 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 1407
Query: 895 aaggatg 901
|||||||
Sbjct: 1408 aaggatg 1414
>gb|CB662485.1|CB662485 OSJNEd06I21.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06I21 5', mRNA sequence
Length = 843
Score = 658 bits (332), Expect = 0.0
Identities = 695/815 (85%), Gaps = 6/815 (0%)
Strand = Plus / Plus
Query: 1 gatctgcatggcatggagtggcgattccgccacatcttccgcgggcaacccaggaggcat 60
|||||||| ||||||| ||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 13 gatctgcacagcatggactggcgcttccgtcacatctttcgcgggcaaccgaggaggcat 72
Query: 61 ctccttcagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 73 ctccttcagagtggttggagtgtgtttgtcagttccaaaaggcttgttgctggggatgct 132
Query: 121 ttcattttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgagg 180
|||||||||||||||||||| || |||||||| || ||||||||||| || |||||||||
Sbjct: 133 ttcattttcctcagaggagagaatggtgaactccgtgttggtgttagacgagctatgagg 192
Query: 181 cagttgtctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttctt 240
||| |||| ||||| |||||||| || |||||||||||||||||||| || || || |||
Sbjct: 193 cagctgtccaatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtcctt 252
Query: 241 gcgactgcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
|| ||||||||||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 253 gctactgcatggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 312
Query: 301 acgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaat 360
||||||||||||||||| || || ||||||||||| ||||||||||| || |||||||||
Sbjct: 313 acgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaacaat 372
Query: 361 tattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagcagagg 420
|| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||||||
Sbjct: 373 tactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagcagagg 432
Query: 421 tttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagttgg 480
||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || ||||||
Sbjct: 433 tttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagttgg 492
Query: 481 agatacttgaaggtgcgctgggatgagccttctactatcccgcggccagataaggtctct 540
|||| | |||||||||| |||||||| || || ||||| ||||||||||||| ||||||
Sbjct: 493 agatccctgaaggtgcggtgggatgaaccatcaactattccgcggccagatagagtctct 552
Query: 541 ccctggaagatagagcctgcttcatcacctcctgttaatcctctccctctttctagagga 600
|| ||||| ||||||||||||||||||||||||||||| || || ||||||||||| |
Sbjct: 553 ccttggaaaatagagcctgcttcatcacctcctgttaacccccttcctctttctagggtt 612
Query: 601 aaaagacctagacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaa 660
||||||||||| | |||||| |||||| | || |||||||| || |||| || ||||||
Sbjct: 613 aaaagacctaggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaa 672
Query: 661 ggtgcaaccaagattgatactgattctgctcaaacaccac---atcaaaa---ttcggtc 714
| ||| || ||| |||| |||||| |||||||| ||| || |||||| | |||||
Sbjct: 673 gctgctactaaggttgacactgatcctgctcaagcacaacgaagtcaaaacagtacggtc 732
Query: 715 ttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgactctgat 774
|||||| ||||||| || |||| ||| | || |||||| ||||| || | |||||||||
Sbjct: 733 ttgcaaggtcaagaacaaatgaccttgangagcaaccttactgagagtaatgactctgat 792
Query: 775 tccactgttcagaagcagatgatgtggtccccatc 809
||||| ||| |||| ||||||||||| |||||
Sbjct: 793 gtcactgctcataagccaatgatgtggtctccatc 827
>gb|CF303595.1|CF303595 ABF1--02-L06.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--02-L06, mRNA sequence
Length = 572
Score = 585 bits (295), Expect = e-164
Identities = 493/559 (88%)
Strand = Plus / Plus
Query: 20 ggcgattccgccacatcttccgcgggcaacccaggaggcatctccttcagagtggttgga 79
|||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9 ggcgcttccgtcacatctttcgcgggcaaccgaggaggcatctccttcagagtggttgga 68
Query: 80 gtgtttttgtcagttccaaaaggcttgttgctggagacgccttcattttcctcagaggag 139
|||| ||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 69 gtgtgtttgtcagttccaaaaggcttgttgctggggatgctttcattttcctcagaggag 128
Query: 140 aaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaatgtacctt 199
| || |||||||| || |||| |||||| || |||||||||||| |||| ||||| ||||
Sbjct: 129 agaatggtgaactccgtgttgttgttagacgagctatgaggcagctgtccaatgtgcctt 188
Query: 200 cttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcga 259
|||| || |||||||||||||||||||| || || || ||||| ||||||||||| || |
Sbjct: 189 cttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatggcatgcta 248
Query: 260 ttaacacaaagtccatgttcactgtctactacaagcctaggacgagcccttcagagttta 319
| ||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 249 tcaacacgaagagtatgttcaccgtctactacaaacctaggacgagcccttcagagttca 308
Query: 320 tcattccatatgatcaatatatggagtcagtaaaaaacaattattctattgggatgagat 379
| || ||||||||||| ||||||||||| || ||||||||||| ||| |||||||||| |
Sbjct: 309 ttataccatatgatcagtatatggagtccgtcaaaaacaattactctgttgggatgaggt 368
Query: 380 tcaggatgaggtttgaaggggaagaggcccccgagcagaggtttactggtacaatagttg 439
||||||||||||||||||| |||||||| || |||||||||||||||||||| ||| |||
Sbjct: 369 tcaggatgaggtttgaaggagaagaggcaccagagcagaggtttactggtactataattg 428
Query: 440 gctgtgaaaatcttgacccactatggcctgattccagttggagatacttgaaggtgcgct 499
|| |||| ||||| |||||| | |||||||| || |||||||||| | |||||||||| |
Sbjct: 429 gcagtgagaatctcgacccagtgtggcctgaatcaagttggagatccctgaaggtgcggt 488
Query: 500 gggatgagccttctactatcccgcggccagataaggtctctccctggaagatagagcctg 559
||||||| || || ||||| ||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 489 gggatgaaccatcaactattccgcggccagatagagtctctccttggaaaatagagcctg 548
Query: 560 cttcatcacctcctgttaa 578
|||||||||||||||||||
Sbjct: 549 cttcatcacctcctgttaa 567
>gb|CF323190.1|CF323190 HDN--03-C17.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-C17, mRNA sequence
Length = 561
Score = 438 bits (221), Expect = e-120
Identities = 443/517 (85%)
Strand = Plus / Plus
Query: 177 gaggcagttgtctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggt 236
||||||| |||| ||||| |||||||| || |||||||||||||||||||| || || ||
Sbjct: 5 gaggcagctgtccaatgtgccttcttcagtcatatctagccaaagcatgcacctgggagt 64
Query: 237 tcttgcgactgcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcc 296
||||| ||||||||||| || || ||||| ||| |||||||| ||||||||||| ||
Sbjct: 65 ccttgctactgcatggcatgctatcaacacgaagagtatgttcaccgtctactacaaacc 124
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 125 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 184
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 185 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 244
Query: 417 gaggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccag 476
||||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || ||
Sbjct: 245 gaggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaag 304
Query: 477 ttggagatacttgaaggtgcgctgggatgagccttctactatcccgcggccagataaggt 536
|||||||| | |||||||||| |||||||| || || ||||| ||||||||||||| ||
Sbjct: 305 ttggagatccctgaaggtgcggtgggatgaaccatcaactattccgcggccagatagagt 364
Query: 537 ctctccctggaagatagagcctgcttcatcacctcctgttaatcctctccctctttctag 596
|||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 365 ctctccttggaaaatagagcctgcttcatcacctcctgttaacccccttcctctttctag 424
Query: 597 aggaaaaagacctagacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaa 656
| ||||||||||| | |||||| |||||| | || |||||||| || |||| || ||
Sbjct: 425 ggttaaaagacctaggccaaatgctcctccagcatctcctgaatctcctattcttacgaa 484
Query: 657 agaaggtgcaaccaagattgatactgattctgctcaa 693
||||| ||| || ||| |||| |||||| ||||||||
Sbjct: 485 agaagctgctactaaggttgacactgatcctgctcaa 521
>gb|CB636812.1|CB636812 OSJNEa02L16.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02L16 5', mRNA sequence
Length = 597
Score = 424 bits (214), Expect = e-116
Identities = 445/522 (85%)
Strand = Plus / Plus
Query: 172 gctatgaggcagttgtctaatgtaccttcttcggttatatctagccaaagcatgcatctc 231
|||||||||||| |||| ||||| |||||||| || |||||||||||||||||||| ||
Sbjct: 6 gctatgaggcagctgtccaatgtgccttcttcagtcatatctagccaaagcatgcacctg 65
Query: 232 ggggttcttgcgactgcatggcacgcgattaacacaaagtccatgttcactgtctactac 291
|| || ||||| ||||||||||| || || ||||| ||| |||||||| |||||||||
Sbjct: 66 ggagtccttgctactgcatggcatgctatcaacacgaagagtatgttcaccgtctactac 125
Query: 292 aagcctaggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagta 351
|| ||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||
Sbjct: 126 aaacctaggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtc 185
Query: 352 aaaaacaattattctattgggatgagattcaggatgaggtttgaaggggaagaggccccc 411
||||||||||| ||| |||||||||| |||| ||||||||||||||| |||||||| ||
Sbjct: 186 aaaaacaattactctgttgggatgaggttcaagatgaggtttgaaggagaagaggcacca 245
Query: 412 gagcagaggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgat 471
|||||||||||||||||||| ||| ||||| |||| ||||| |||||| | ||||||||
Sbjct: 246 gagcagaggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaa 305
Query: 472 tccagttggagatacttgaaggtgcgctgggatgagccttctactatcccgcggccagat 531
|| |||||||||| | |||||||||| |||||||| || || ||||| | ||||||||||
Sbjct: 306 tcaagttggagatccctgaaggtgcggtgggatgaaccatcaactattctgcggccagat 365
Query: 532 aaggtctctccctggaagatagagcctgcttcatcacctcctgttaatcctctccctctt 591
| |||||||| ||||| ||||||||||||||||||||||||||||| || || ||||||
Sbjct: 366 agagtctctccttggaaaatagagcctgcttcatcacctcctgttaacccccttcctctt 425
Query: 592 tctagaggaaaaagacctagacaaaatgcgcctccaccttcccctgaatcatctgttctc 651
||||| | ||||||||||| | |||||| |||||| | || |||||||| || ||||
Sbjct: 426 tctagggttaaaagacctaggccaaatgctcctccagcatctcctgaatctcctattctt 485
Query: 652 acaaaagaaggtgcaaccaagattgatactgattctgctcaa 693
|| ||||||| ||| || || |||| |||||| ||||||||
Sbjct: 486 acgaaagaagctgctactaaagttgacactgatcctgctcaa 527
>gb|CB683998.1|CB683998 OSJNEf13B19.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf13B19 5', mRNA sequence
Length = 800
Score = 400 bits (202), Expect = e-109
Identities = 485/578 (83%), Gaps = 6/578 (1%)
Strand = Plus / Plus
Query: 238 cttgcgactgcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcct 297
||||| ||||||||||| || || ||||| ||| |||||||| ||||||||||| |||
Sbjct: 1 cttgctactgcatggcatgctatcaacacgaagagtatgttcaccgtctactacaaacct 60
Query: 298 aggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaac 357
|||||||||||||||||||| || || ||||||||||| ||||||||||| || ||||||
Sbjct: 61 aggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaac 120
Query: 358 aattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagcag 417
||||| ||| |||||||||| |||||||||||||||||||| |||||||| || ||||||
Sbjct: 121 aattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagcag 180
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 181 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 240
Query: 478 tggagatacttgaaggtgcgctgggatgagccttctactatcccgcggccagataaggtc 537
||||||| | |||||||||| |||||||| || || ||||| ||||||||||||| |||
Sbjct: 241 tggagatccctgaaggtgcggtgggatgaaccatcaactattccgcggccagatagagtc 300
Query: 538 tctccctggaagatagagcctgcttcatcacctcctgttaatcctctccctctttctaga 597
||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 301 tctccttggaaaatagagcctgcttcatcacctcctgttaacccccttcctctttctagg 360
Query: 598 ggaaaaagacctagacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaa 657
| ||||||||||| | |||||| |||||| | || |||||||| || |||| || |||
Sbjct: 361 gttaaaagacctaggccaaatgctcctccagcatctcctgaatctcctattcttacgaaa 420
Query: 658 gaaggtgcaaccaagattgatactgattctgctcaaacaccac---atcaaaa---ttcg 711
|||| ||| || ||| |||| |||||| |||||||| ||| || |||||| | ||
Sbjct: 421 gaagctgctactaaggttgacactgatcctgctcaagcacaacgaagtcaaaacagtacg 480
Query: 712 gtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgactct 771
||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||||
Sbjct: 481 gtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgactct 540
Query: 772 gattccactgttcagaagcagatgatgtggtccccatc 809
||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 541 gatgtcactgctcataagccaatgatgtggtctccatc 578
Score = 67.9 bits (34), Expect = 1e-008
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 610 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 669
Query: 895 aaggat 900
||||||
Sbjct: 670 aaggat 675
>gb|CB662100.1|CB662100 OSJNEd05M17.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05M17 5', mRNA sequence
Length = 749
Score = 224 bits (113), Expect = 8e-056
Identities = 330/401 (82%), Gaps = 6/401 (1%)
Strand = Plus / Plus
Query: 415 cagaggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattcc 474
||||||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| ||
Sbjct: 1 cagaggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatca 60
Query: 475 agttggagatacttgaaggtgcgctgggatgagccttctactatcccgcggccagataag 534
|||||||||| | |||||||||| |||||||| || || ||||| |||||||||||||
Sbjct: 61 agttggagatccctgaaggtgcggtgggatgaaccatcaactattccgcggccagataga 120
Query: 535 gtctctccctggaagatagagcctgcttcatcacctcctgttaatcctctccctctttct 594
|||||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 121 gtctctccttggaaaatagagcctgcttcatcacctcctgttaacccccttcctctttct 180
Query: 595 agaggaaaaagacctagacaaaatgcgcctccaccttcccctgaatcatctgttctcaca 654
|| | ||||||||||| | |||||| |||||| | || |||||||| || |||| ||
Sbjct: 181 agggttaaaagacctaggccaaatgctcctccagcatctcctgaatctcctattcttacg 240
Query: 655 aaagaaggtgcaaccaagattgatactgattctgctcaaacaccac---atcaaaa---t 708
||||||| ||| || ||| |||| |||||| |||||||| ||| || |||||| |
Sbjct: 241 aaagaagctgctactaaggttgacactgatcctgctcaagcacaacgaagtcaaaacagt 300
Query: 709 tcggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgac 768
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | |||
Sbjct: 301 acggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgac 360
Query: 769 tctgattccactgttcagaagcagatgatgtggtccccatc 809
|||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 361 tctgatgtcactgctcataagccaatgatgtggtctccatc 401
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 433 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 492
Query: 895 aaggatg 901
|||||||
Sbjct: 493 aaggatg 499
>dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091N24, full
insert sequence
Length = 3981
Score = 194 bits (98), Expect = 7e-047
Identities = 287/350 (82%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 1683 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatc 1742
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||||| || ||||| || |||||||||
Sbjct: 1743 tttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaa 1802
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgact 246
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 1803 actaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccaca 1862
Query: 247 gcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagc 306
|||||||| || |||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 1863 gcatggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggacaagt 1922
Query: 307 ccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattct 366
|| | |||||| | | || || |||| |||||||| ||| | ||| | ||||| ||
Sbjct: 1923 ccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactcc 1982
Query: 367 attgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 1983 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 2032
>emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA for auxin response factor 1 (arf1
gene)
Length = 2511
Score = 186 bits (94), Expect = 2e-044
Identities = 286/350 (81%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| || || ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 592 cagagtggctggagtgtgttcgttagtgccaaacggcttgttgctggggatgcctttatc 651
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||||| || ||||| || |||||||||
Sbjct: 652 tttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaa 711
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgact 246
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 712 actaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccaca 771
Query: 247 gcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagc 306
|||||||| || |||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 772 gcatggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggacaagt 831
Query: 307 ccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattct 366
|| | |||||| | | || || |||| |||||||| ||| | ||| | ||||| ||
Sbjct: 832 ccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactcc 891
Query: 367 attgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 892 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 941
>dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A03, full
insert sequence
Length = 3338
Score = 186 bits (94), Expect = 2e-044
Identities = 286/350 (81%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 874 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatc 933
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||||| || ||||| || |||||||||
Sbjct: 934 tttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaa 993
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgact 246
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 994 actaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccaca 1053
Query: 247 gcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagc 306
|||||||| || |||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 1054 gcatggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggacaagt 1113
Query: 307 ccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattct 366
|| | |||||| | | || || |||| |||||||| ||| | ||| | ||||| ||
Sbjct: 1114 ccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactcc 1173
Query: 367 attgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||| ||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 1174 attgagatgagatttaagatgaggtttgaaggtgaagaggctccagagca 1223
>gb|AU068000.1|AU068000 AU068000 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11460_7A, mRNA sequence
Length = 379
Score = 167 bits (84), Expect = 2e-038
Identities = 198/236 (83%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 90 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatc 149
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||||| || ||||| || |||||||||
Sbjct: 150 tttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaa 209
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgact 246
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 210 actaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccaca 269
Query: 247 gcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggac 302
|||||||| || |||||||| | |||||||||||||||||||||||||||||||
Sbjct: 270 gcatggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggac 325
>gb|CF307118.1|CF307118 HDA1--05-M22.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--05-M22, mRNA sequence
Length = 587
Score = 167 bits (84), Expect = 2e-038
Identities = 198/236 (83%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 279 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatc 338
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||||| || ||||| || |||||||||
Sbjct: 339 tttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaa 398
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgact 246
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 399 actaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccaca 458
Query: 247 gcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggac 302
|||||||| || |||||||| | |||||||||||||||||||||||||||||||
Sbjct: 459 gcatggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggac 514
>gb|CF306138.1|CF306138 HDA1--02-M21.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--02-M21, mRNA sequence
Length = 556
Score = 155 bits (78), Expect = 6e-035
Identities = 283/350 (80%), Gaps = 1/350 (0%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 76 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatc 135
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||| | ||||||| || |||||||||
Sbjct: 136 tttctcagaggtgagaacggggaactgcgtgttttt-ttaggcgtgcaatgaggcagcaa 194
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgact 246
||||||| || ||||| | |||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 195 actaatgttccatcttcattgttatcaagccacagcatgcatcttggggttcttgccaca 254
Query: 247 gcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagc 306
|||||||| || |||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 255 gcatggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggacaagt 314
Query: 307 ccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattct 366
|| | |||||| | | || || |||| |||||||| ||| | ||| ||||| ||
Sbjct: 315 ccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacgaaattactcc 374
Query: 367 attgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 375 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 424
>gb|CF326153.1|CF326153 JMT1--05-D24.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-D24, mRNA sequence
Length = 664
Score = 153 bits (77), Expect = 2e-034
Identities = 198/237 (83%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 362 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatc 421
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||||| || ||||| || |||||||||
Sbjct: 422 tttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaa 481
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatc-tcggggttcttgcgac 245
||||||| || ||||| || ||||| ||||| |||||||||| | ||||||||||| ||
Sbjct: 482 actaatgttccatcttcagtgatatcaagccacagcatgcatcttgggggttcttgccac 541
Query: 246 tgcatggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggac 302
|||||||| || |||||||| | |||||||||||||||||||||||||||||||
Sbjct: 542 agcatggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggac 598
>gb|AACV01002980.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002980, whole
genome shotgun sequence
Length = 45351
Score = 153 bits (77), Expect = 2e-034
Identities = 113/125 (90%)
Strand = Plus / Minus
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 14482 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 14423
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 14422 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 14363
Query: 417 gaggt 421
|||||
Sbjct: 14362 gaggt 14358
Score = 143 bits (72), Expect = 2e-031
Identities = 87/92 (94%)
Strand = Plus / Minus
Query: 43 gggcaacccaggaggcatctccttcagagtggttggagtgtttttgtcagttccaaaagg 102
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 14953 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 14894
Query: 103 cttgttgctggagacgccttcattttcctcag 134
||||||||||| || || ||||||||||||||
Sbjct: 14893 cttgttgctggggatgctttcattttcctcag 14862
Score = 137 bits (69), Expect = 1e-029
Identities = 144/169 (85%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
||||||||| || |||||||| || ||||||||||| || |||||||||||| |||| ||
Sbjct: 14790 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 14731
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| |||||||| || |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 14730 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 14671
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 14670 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 14622
Score = 137 bits (69), Expect = 1e-029
Identities = 147/173 (84%)
Strand = Plus / Minus
Query: 491 aggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccctggaaga 550
||||||| |||||||| || || ||||| ||||||||||||| |||||||| ||||| |
Sbjct: 14120 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 14061
Query: 551 tagagcctgcttcatcacctcctgttaatcctctccctctttctagaggaaaaagaccta 610
|||||||||||||||||||||||||||| || || ||||||||||| | ||||||||||
Sbjct: 14060 tagagcctgcttcatcacctcctgttaacccccttcctctttctagggttaaaagaccta 14001
Query: 611 gacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaaggt 663
| | |||||| |||||| | || |||||||| || |||| || |||||||||
Sbjct: 14000 ggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaaggt 13948
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 13674 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 13615
Query: 895 aaggatg 901
|||||||
Sbjct: 13614 aaggatg 13608
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 14272 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 14213
Query: 478 tggagatacttgaaggt 494
||||||| | |||||||
Sbjct: 14212 tggagatccctgaaggt 14196
Score = 56.0 bits (28), Expect = 4e-005
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 710 cggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgact 769
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||
Sbjct: 13805 cggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgact 13746
Query: 770 ctgattccactgttcagaagcagatgatgtggtccccatc 809
||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 13745 ctgatgtcactgctcataagccaatgatgtggtctccatc 13706
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 153 bits (77), Expect = 2e-034
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 40770788 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 40770847
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 40770848 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 40770907
Query: 417 gaggt 421
|||||
Sbjct: 40770908 gaggt 40770912
Score = 143 bits (72), Expect = 2e-031
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 43 gggcaacccaggaggcatctccttcagagtggttggagtgtttttgtcagttccaaaagg 102
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 40770317 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 40770376
Query: 103 cttgttgctggagacgccttcattttcctcag 134
||||||||||| || || ||||||||||||||
Sbjct: 40770377 cttgttgctggggatgctttcattttcctcag 40770408
Score = 137 bits (69), Expect = 1e-029
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 491 aggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccctggaaga 550
||||||| |||||||| || || ||||| ||||||||||||| |||||||| ||||| |
Sbjct: 40771150 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 40771209
Query: 551 tagagcctgcttcatcacctcctgttaatcctctccctctttctagaggaaaaagaccta 610
|||||||||||||||||||||||||||| || || ||||||||||| | ||||||||||
Sbjct: 40771210 tagagcctgcttcatcacctcctgttaacccccttcctctttctagggttaaaagaccta 40771269
Query: 611 gacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaaggt 663
| | |||||| |||||| | || |||||||| || |||| || |||||||||
Sbjct: 40771270 ggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaaggt 40771322
Score = 137 bits (69), Expect = 1e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
||||||||| || |||||||| || ||||||||||| || |||||||||||| |||| ||
Sbjct: 40770480 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 40770539
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| |||||||| || |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 40770540 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 40770599
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 40770600 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 40770648
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 40771596 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 40771655
Query: 895 aaggatg 901
|||||||
Sbjct: 40771656 aaggatg 40771662
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 40770998 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 40771057
Query: 478 tggagatacttgaaggt 494
||||||| | |||||||
Sbjct: 40771058 tggagatccctgaaggt 40771074
Score = 56.0 bits (28), Expect = 4e-005
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 710 cggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgact 769
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||
Sbjct: 40771465 cggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgact 40771524
Query: 770 ctgattccactgttcagaagcagatgatgtggtccccatc 809
||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 40771525 ctgatgtcactgctcataagccaatgatgtggtctccatc 40771564
Score = 44.1 bits (22), Expect = 0.16
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 205 gttatatctagccaaagcatgcatct 230
|||||||| |||||||||||||||||
Sbjct: 7545628 gttatatcaagccaaagcatgcatct 7545653
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 153 bits (77), Expect = 2e-034
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 399082 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 399141
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 399142 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 399201
Query: 417 gaggt 421
|||||
Sbjct: 399202 gaggt 399206
Score = 143 bits (72), Expect = 2e-031
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 43 gggcaacccaggaggcatctccttcagagtggttggagtgtttttgtcagttccaaaagg 102
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 398611 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 398670
Query: 103 cttgttgctggagacgccttcattttcctcag 134
||||||||||| || || ||||||||||||||
Sbjct: 398671 cttgttgctggggatgctttcattttcctcag 398702
Score = 137 bits (69), Expect = 1e-029
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 491 aggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccctggaaga 550
||||||| |||||||| || || ||||| ||||||||||||| |||||||| ||||| |
Sbjct: 399444 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 399503
Query: 551 tagagcctgcttcatcacctcctgttaatcctctccctctttctagaggaaaaagaccta 610
|||||||||||||||||||||||||||| || || ||||||||||| | ||||||||||
Sbjct: 399504 tagagcctgcttcatcacctcctgttaacccccttcctctttctagggttaaaagaccta 399563
Query: 611 gacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaaggt 663
| | |||||| |||||| | || |||||||| || |||| || |||||||||
Sbjct: 399564 ggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaaggt 399616
Score = 137 bits (69), Expect = 1e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
||||||||| || |||||||| || ||||||||||| || |||||||||||| |||| ||
Sbjct: 398774 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 398833
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| |||||||| || |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 398834 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 398893
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 398894 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 398942
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 399890 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 399949
Query: 895 aaggatg 901
|||||||
Sbjct: 399950 aaggatg 399956
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 399292 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 399351
Query: 478 tggagatacttgaaggt 494
||||||| | |||||||
Sbjct: 399352 tggagatccctgaaggt 399368
Score = 56.0 bits (28), Expect = 4e-005
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 710 cggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgact 769
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||
Sbjct: 399759 cggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgact 399818
Query: 770 ctgattccactgttcagaagcagatgatgtggtccccatc 809
||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 399819 ctgatgtcactgctcataagccaatgatgtggtctccatc 399858
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBa0093F16
Length = 160925
Score = 153 bits (77), Expect = 2e-034
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 132096 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 132155
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 132156 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 132215
Query: 417 gaggt 421
|||||
Sbjct: 132216 gaggt 132220
Score = 143 bits (72), Expect = 2e-031
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 43 gggcaacccaggaggcatctccttcagagtggttggagtgtttttgtcagttccaaaagg 102
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 131625 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 131684
Query: 103 cttgttgctggagacgccttcattttcctcag 134
||||||||||| || || ||||||||||||||
Sbjct: 131685 cttgttgctggggatgctttcattttcctcag 131716
Score = 137 bits (69), Expect = 1e-029
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 491 aggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccctggaaga 550
||||||| |||||||| || || ||||| ||||||||||||| |||||||| ||||| |
Sbjct: 132458 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 132517
Query: 551 tagagcctgcttcatcacctcctgttaatcctctccctctttctagaggaaaaagaccta 610
|||||||||||||||||||||||||||| || || ||||||||||| | ||||||||||
Sbjct: 132518 tagagcctgcttcatcacctcctgttaacccccttcctctttctagggttaaaagaccta 132577
Query: 611 gacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaaggt 663
| | |||||| |||||| | || |||||||| || |||| || |||||||||
Sbjct: 132578 ggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaaggt 132630
Score = 137 bits (69), Expect = 1e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
||||||||| || |||||||| || ||||||||||| || |||||||||||| |||| ||
Sbjct: 131788 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 131847
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| |||||||| || |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 131848 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 131907
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 131908 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 131956
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 132904 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 132963
Query: 895 aaggatg 901
|||||||
Sbjct: 132964 aaggatg 132970
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 132306 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 132365
Query: 478 tggagatacttgaaggt 494
||||||| | |||||||
Sbjct: 132366 tggagatccctgaaggt 132382
Score = 56.0 bits (28), Expect = 4e-005
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 710 cggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgact 769
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||
Sbjct: 132773 cggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgact 132832
Query: 770 ctgattccactgttcagaagcagatgatgtggtccccatc 809
||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 132833 ctgatgtcactgctcataagccaatgatgtggtctccatc 132872
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 153 bits (77), Expect = 2e-034
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 14967616 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 14967675
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 14967676 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 14967735
Query: 417 gaggt 421
|||||
Sbjct: 14967736 gaggt 14967740
Score = 143 bits (72), Expect = 2e-031
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 43 gggcaacccaggaggcatctccttcagagtggttggagtgtttttgtcagttccaaaagg 102
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 14967145 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 14967204
Query: 103 cttgttgctggagacgccttcattttcctcag 134
||||||||||| || || ||||||||||||||
Sbjct: 14967205 cttgttgctggggatgctttcattttcctcag 14967236
Score = 137 bits (69), Expect = 1e-029
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 491 aggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccctggaaga 550
||||||| |||||||| || || ||||| ||||||||||||| |||||||| ||||| |
Sbjct: 14967978 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 14968037
Query: 551 tagagcctgcttcatcacctcctgttaatcctctccctctttctagaggaaaaagaccta 610
|||||||||||||||||||||||||||| || || ||||||||||| | ||||||||||
Sbjct: 14968038 tagagcctgcttcatcacctcctgttaacccccttcctctttctagggttaaaagaccta 14968097
Query: 611 gacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaaggt 663
| | |||||| |||||| | || |||||||| || |||| || |||||||||
Sbjct: 14968098 ggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaaggt 14968150
Score = 137 bits (69), Expect = 1e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
||||||||| || |||||||| || ||||||||||| || |||||||||||| |||| ||
Sbjct: 14967308 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 14967367
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| |||||||| || |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 14967368 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 14967427
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 14967428 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 14967476
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 14968424 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 14968483
Query: 895 aaggatg 901
|||||||
Sbjct: 14968484 aaggatg 14968490
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 14967826 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 14967885
Query: 478 tggagatacttgaaggt 494
||||||| | |||||||
Sbjct: 14967886 tggagatccctgaaggt 14967902
Score = 56.0 bits (28), Expect = 4e-005
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 710 cggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgact 769
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||
Sbjct: 14968293 cggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgact 14968352
Query: 770 ctgattccactgttcagaagcagatgatgtggtccccatc 809
||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 14968353 ctgatgtcactgctcataagccaatgatgtggtctccatc 14968392
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 153 bits (77), Expect = 2e-034
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 40169337 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 40169396
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 40169397 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 40169456
Query: 417 gaggt 421
|||||
Sbjct: 40169457 gaggt 40169461
Score = 143 bits (72), Expect = 2e-031
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 43 gggcaacccaggaggcatctccttcagagtggttggagtgtttttgtcagttccaaaagg 102
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 40168866 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 40168925
Query: 103 cttgttgctggagacgccttcattttcctcag 134
||||||||||| || || ||||||||||||||
Sbjct: 40168926 cttgttgctggggatgctttcattttcctcag 40168957
Score = 137 bits (69), Expect = 1e-029
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 491 aggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccctggaaga 550
||||||| |||||||| || || ||||| ||||||||||||| |||||||| ||||| |
Sbjct: 40169699 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 40169758
Query: 551 tagagcctgcttcatcacctcctgttaatcctctccctctttctagaggaaaaagaccta 610
|||||||||||||||||||||||||||| || || ||||||||||| | ||||||||||
Sbjct: 40169759 tagagcctgcttcatcacctcctgttaacccccttcctctttctagggttaaaagaccta 40169818
Query: 611 gacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaaggt 663
| | |||||| |||||| | || |||||||| || |||| || |||||||||
Sbjct: 40169819 ggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaaggt 40169871
Score = 137 bits (69), Expect = 1e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
||||||||| || |||||||| || ||||||||||| || |||||||||||| |||| ||
Sbjct: 40169029 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 40169088
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| |||||||| || |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 40169089 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 40169148
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 40169149 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 40169197
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 40170145 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 40170204
Query: 895 aaggatg 901
|||||||
Sbjct: 40170205 aaggatg 40170211
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 40169547 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 40169606
Query: 478 tggagatacttgaaggt 494
||||||| | |||||||
Sbjct: 40169607 tggagatccctgaaggt 40169623
Score = 56.0 bits (28), Expect = 4e-005
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 710 cggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgact 769
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||
Sbjct: 40170014 cggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgact 40170073
Query: 770 ctgattccactgttcagaagcagatgatgtggtccccatc 809
||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 40170074 ctgatgtcactgctcataagccaatgatgtggtctccatc 40170113
Score = 44.1 bits (22), Expect = 0.16
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 205 gttatatctagccaaagcatgcatct 230
|||||||| |||||||||||||||||
Sbjct: 7619908 gttatatcaagccaaagcatgcatct 7619933
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 153 bits (77), Expect = 2e-034
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 297 taggacgagcccttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaa 356
||||||||||||||||||||| || || ||||||||||| ||||||||||| || |||||
Sbjct: 40690118 taggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaa 40690177
Query: 357 caattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
|||||| ||| |||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 40690178 caattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagca 40690237
Query: 417 gaggt 421
|||||
Sbjct: 40690238 gaggt 40690242
Score = 143 bits (72), Expect = 2e-031
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 43 gggcaacccaggaggcatctccttcagagtggttggagtgtttttgtcagttccaaaagg 102
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 40689647 gggcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaagg 40689706
Query: 103 cttgttgctggagacgccttcattttcctcag 134
||||||||||| || || ||||||||||||||
Sbjct: 40689707 cttgttgctggggatgctttcattttcctcag 40689738
Score = 137 bits (69), Expect = 1e-029
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 491 aggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccctggaaga 550
||||||| |||||||| || || ||||| ||||||||||||| |||||||| ||||| |
Sbjct: 40690480 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 40690539
Query: 551 tagagcctgcttcatcacctcctgttaatcctctccctctttctagaggaaaaagaccta 610
|||||||||||||||||||||||||||| || || ||||||||||| | ||||||||||
Sbjct: 40690540 tagagcctgcttcatcacctcctgttaacccccttcctctttctagggttaaaagaccta 40690599
Query: 611 gacaaaatgcgcctccaccttcccctgaatcatctgttctcacaaaagaaggt 663
| | |||||| |||||| | || |||||||| || |||| || |||||||||
Sbjct: 40690600 ggccaaatgctcctccagcatctcctgaatctcctattcttacgaaagaaggt 40690652
Score = 137 bits (69), Expect = 1e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
||||||||| || |||||||| || ||||||||||| || |||||||||||| |||| ||
Sbjct: 40689810 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 40689869
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| |||||||| || |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 40689870 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 40689929
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || || ||||| ||| |||||||| ||||||||||| ||||||
Sbjct: 40689930 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 40689978
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 835 tttcagccgagacctgctatgggtaactggatgccattgggaaggcgtgaaactgacttc 894
||||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 40690926 tttcagcagagaccccctatggataattggatgcagttgggaaggcgtgaaactgacttt 40690985
Query: 895 aaggatg 901
|||||||
Sbjct: 40690986 aaggatg 40690992
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 418 aggtttactggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagt 477
|||||||||||||| ||| ||||| |||| ||||| |||||| | |||||||| || |||
Sbjct: 40690328 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 40690387
Query: 478 tggagatacttgaaggt 494
||||||| | |||||||
Sbjct: 40690388 tggagatccctgaaggt 40690404
Score = 56.0 bits (28), Expect = 4e-005
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 710 cggtcttgcaaagtcaagagcagatgagctttaggaacaacctgactgaaagcaccgact 769
||||||||||| ||||||| || |||| ||| |||| |||||| ||||| || | ||||
Sbjct: 40690795 cggtcttgcaaggtcaagaacaaatgaccttgaggagcaaccttactgagagtaatgact 40690854
Query: 770 ctgattccactgttcagaagcagatgatgtggtccccatc 809
||||| ||||| ||| |||| ||||||||||| |||||
Sbjct: 40690855 ctgatgtcactgctcataagccaatgatgtggtctccatc 40690894
Score = 44.1 bits (22), Expect = 0.16
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 205 gttatatctagccaaagcatgcatct 230
|||||||| |||||||||||||||||
Sbjct: 7547846 gttatatcaagccaaagcatgcatct 7547871
>dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J11, full
insert sequence
Length = 3100
Score = 133 bits (67), Expect = 2e-028
Identities = 232/287 (80%)
Strand = Plus / Plus
Query: 16 gagtggcgattccgccacatcttccgcgggcaacccaggaggcatctccttcagagtggt 75
|||||||| ||||| ||||||||||| || || || | || || || || |||||||||
Sbjct: 729 gagtggcgcttccgtcacatcttccgaggtcagccacgaagacaccttctccagagtggt 788
Query: 76 tggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcattttcctcaga 135
|||||||||||||| ||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 789 tggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcatatttctcaga 848
Query: 136 ggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaatgta 195
|| || || || ||||| |||||||| ||| |||| || ||||| || ||||| |
Sbjct: 849 ggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaatatt 908
Query: 196 ccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcac 255
|| |||||||| ||||| ||||| || |||||||| || |||||||| |||||||||||
Sbjct: 909 ccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcat 968
Query: 256 gcgattaacacaaagtccatgttcactgtctactacaagcctaggac 302
|| | ||||| ||||||||||||| ||||||||||| |||||
Sbjct: 969 gcagtgaacactggaaccatgttcactgtgtactacaagccaaggac 1015
Score = 46.1 bits (23), Expect = 0.040
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggcccccgagcagaggtttactggt 429
||||||||||||| ||||| |||||||| |||||||| | ||||| || || |||||
Sbjct: 1083 gggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaagattcactggc 1142
Query: 430 acaatagttgg 440
||||| |||||
Sbjct: 1143 acaattgttgg 1153
>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full
insert sequence
Length = 3265
Score = 133 bits (67), Expect = 2e-028
Identities = 232/287 (80%)
Strand = Plus / Plus
Query: 16 gagtggcgattccgccacatcttccgcgggcaacccaggaggcatctccttcagagtggt 75
|||||||| ||||| ||||||||||| || || || | || || || || |||||||||
Sbjct: 875 gagtggcgcttccgtcacatcttccgaggtcagccacgaagacaccttctccagagtggt 934
Query: 76 tggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcattttcctcaga 135
|||||||||||||| ||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 935 tggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcatatttctcaga 994
Query: 136 ggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaatgta 195
|| || || || ||||| |||||||| ||| |||| || ||||| || ||||| |
Sbjct: 995 ggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaatatt 1054
Query: 196 ccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcac 255
|| |||||||| ||||| ||||| || |||||||| || |||||||| |||||||||||
Sbjct: 1055 ccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcat 1114
Query: 256 gcgattaacacaaagtccatgttcactgtctactacaagcctaggac 302
|| | ||||| ||||||||||||| ||||||||||| |||||
Sbjct: 1115 gcagtgaacactggaaccatgttcactgtgtactacaagccaaggac 1161
Score = 46.1 bits (23), Expect = 0.040
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggcccccgagcagaggtttactggt 429
||||||||||||| ||||| |||||||| |||||||| | ||||| || || |||||
Sbjct: 1229 gggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaagattcactggc 1288
Query: 430 acaatagttgg 440
||||| |||||
Sbjct: 1289 acaattgttgg 1299
>gb|CF303832.1|CF303832 ABF1--03-F11.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-F11, mRNA sequence
Length = 566
Score = 129 bits (65), Expect = 3e-027
Identities = 188/229 (82%)
Strand = Plus / Plus
Query: 188 ctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactg 247
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |
Sbjct: 49 ctaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacag 108
Query: 248 catggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagcc 307
||||||| || |||||||| | ||||||||||||||||||||||||||||||| || |
Sbjct: 109 catggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggacaagtc 168
Query: 308 cttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattcta 367
| | |||||| | | || || |||| |||||||| ||| | ||| ||||| || |
Sbjct: 169 cagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacgaaattactcca 228
Query: 368 ttgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 229 ttgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 277
>gb|CF304553.1|CF304553 ABF1--05-E20.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--05-E20, mRNA sequence
Length = 568
Score = 129 bits (65), Expect = 3e-027
Identities = 188/229 (82%)
Strand = Plus / Plus
Query: 188 ctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactg 247
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |
Sbjct: 49 ctaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacag 108
Query: 248 catggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagcc 307
||||||| || |||||||| | ||||||||||||||||||||||||||||||| || |
Sbjct: 109 catggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggacaagtc 168
Query: 308 cttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattcta 367
| | |||||| | | || || |||| |||||||| ||| | ||| ||||| || |
Sbjct: 169 cagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacgaaattactcca 228
Query: 368 ttgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 229 ttgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 277
>gb|CF304781.1|CF304781 ABF1--05-O21.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--05-O21, mRNA sequence
Length = 568
Score = 129 bits (65), Expect = 3e-027
Identities = 188/229 (82%)
Strand = Plus / Plus
Query: 188 ctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactg 247
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |
Sbjct: 49 ctaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacag 108
Query: 248 catggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagcc 307
||||||| || |||||||| | ||||||||||||||||||||||||||||||| || |
Sbjct: 109 catggcatgctgttaacacagggaccatgttcactgtctactacaagcctaggacaagtc 168
Query: 308 cttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattcta 367
| | |||||| | | || || |||| |||||||| ||| | ||| ||||| || |
Sbjct: 169 cagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacgaaattactcca 228
Query: 368 ttgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 229 ttgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 277
>gb|CB647657.1|CB647657 OSJNEb10K20.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10K20 5', mRNA sequence
Length = 684
Score = 127 bits (64), Expect = 1e-026
Identities = 181/220 (82%)
Strand = Plus / Plus
Query: 188 ctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactg 247
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |
Sbjct: 44 ctaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacag 103
Query: 248 catggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagcc 307
||||||| || |||||||| | || |||||||||||||||||||||||||||| || |
Sbjct: 104 catggcatgctgttaacacagggaccgtgttcactgtctactacaagcctaggacaagtc 163
Query: 308 cttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattcta 367
| | |||||| | | || || |||| |||||||| ||| | ||| | ||||| || |
Sbjct: 164 cagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactcca 223
Query: 368 ttgggatgagattcaggatgaggtttgaaggggaagaggc 407
||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 224 ttgggatgagatttaagatgaggtttgaaggtgaagaggc 263
>gb|CF304214.1|CF304214 ABF1--04-F24.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-F24, mRNA sequence
Length = 581
Score = 113 bits (57), Expect = 2e-022
Identities = 186/229 (81%)
Strand = Plus / Plus
Query: 188 ctaatgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactg 247
||||||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |
Sbjct: 49 ctaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacag 108
Query: 248 catggcacgcgattaacacaaagtccatgttcactgtctactacaagcctaggacgagcc 307
||||||| || |||||||| | |||||||||||||||||||| | |||||||| || |
Sbjct: 109 catggcatgctgttaacacagggaccatgttcactgtctactactatcctaggacaagtc 168
Query: 308 cttcagagtttatcattccatatgatcaatatatggagtcagtaaaaaacaattattcta 367
| | |||||| | | || || |||| |||||||| ||| | ||| ||||| || |
Sbjct: 169 cagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacgaaattactcca 228
Query: 368 ttgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 229 ttgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 277
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09,
complete sequence
Length = 43883
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 40221 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 40162
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 40161 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 40102
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 40101 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 40053
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 39839 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 39780
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 39779 ggtgaagaggctccagagcaaaggt 39755
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 40374 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 40319
>ref|NT_107088.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09,
complete sequence
Length = 43883
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 40221 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 40162
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 40161 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 40102
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 40101 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 40053
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 39839 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 39780
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 39779 ggtgaagaggctccagagcaaaggt 39755
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 40374 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 40319
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0056I10, complete sequence
Length = 158833
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 8327 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 8268
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 8267 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 8208
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 8207 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 8159
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 7945 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 7886
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 7885 ggtgaagaggctccagagcaaaggt 7861
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 8480 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 8425
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08,
complete sequence
Length = 136853
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 131558 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 131499
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 131498 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 131439
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 131438 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 131390
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 131176 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 131117
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 131116 ggtgaagaggctccagagcaaaggt 131092
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 131711 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 131656
>gb|AACV01023253.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023253, whole
genome shotgun sequence
Length = 21782
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 21246 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 21187
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 21186 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 21127
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 21126 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 21078
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 20864 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 20805
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 20804 ggtgaagaggctccagagcaaaggt 20780
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 21399 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 21344
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101
genomic scaffold, whole genome shotgun sequence
Length = 5106408
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 982076 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 982017
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 982016 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 981957
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 981956 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 981908
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 981694 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 981635
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 981634 ggtgaagaggctccagagcaaaggt 981610
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 982229 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 982174
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 15147058 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 15146999
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 15146998 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 15146939
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 15146938 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 15146890
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 15146676 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 15146617
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 15146616 ggtgaagaggctccagagcaaaggt 15146592
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 15147211 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 15147156
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 18272962 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 18272903
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 18272902 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 18272843
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 18272842 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 18272794
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 18272580 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 18272521
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 18272520 ggtgaagaggctccagagcaaaggt 18272496
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 18273115 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 18273060
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 113 bits (57), Expect = 2e-022
Identities = 141/169 (83%)
Strand = Plus / Minus
Query: 132 cagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttgtctaa 191
|||||| || ||||| ||||| || ||||| || ||||| || ||||||||| ||||
Sbjct: 18432242 cagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaa 18432183
Query: 192 tgtaccttcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatg 251
||| || ||||| || ||||| ||||| ||||||||||| ||||||||||| || |||||
Sbjct: 18432182 tgttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatg 18432123
Query: 252 gcacgcgattaacacaaagtccatgttcactgtctactacaagcctagg 300
||| || |||||||| | |||||||||||||||||||||||||||||
Sbjct: 18432122 gcatgctgttaacacagggaccatgttcactgtctactacaagcctagg 18432074
Score = 65.9 bits (33), Expect = 4e-008
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 337 tatatggagtcagtaaaaaacaattattctattgggatgagattcaggatgaggtttgaa 396
|||||||| ||| | ||| | ||||| || |||||||||||||| | |||||||||||||
Sbjct: 18431860 tatatggaatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaa 18431801
Query: 397 ggggaagaggcccccgagcagaggt 421
|| |||||||| || ||||| ||||
Sbjct: 18431800 ggtgaagaggctccagagcaaaggt 18431776
Score = 56.0 bits (28), Expect = 4e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgcctt 122
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || |||||
Sbjct: 18432395 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 18432340
>gb|CF326332.1|CF326332 JMT1--05-M08.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-M08, mRNA sequence
Length = 529
Score = 95.6 bits (48), Expect = 5e-017
Identities = 135/164 (82%)
Strand = Plus / Plus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
|||||||| |||||||| ||||| ||| ||||| ||||||||||||| || ||||| ||
Sbjct: 362 cagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatc 421
Query: 127 ttcctcagaggagaaaacggtgaacttcgagttggtgttaggcgcgctatgaggcagttg 186
|| |||||||| || ||||| ||||| || ||||| || ||||| || |||||||||
Sbjct: 422 tttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaa 481
Query: 187 tctaatgtaccttcttcggttatatctagccaaagcatgcatct 230
||||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 482 actaatgttccatcttcagtgatatcaagccacagcatgcatct 525
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 162200
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||||||
Sbjct: 108499 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 108440
Query: 127 ttcctcag 134
|| |||||
Sbjct: 108439 tttctcag 108432
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 199 tcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcg 258
|||||||| ||||| ||||| || |||||||| || |||||||| ||||||||||| ||
Sbjct: 108277 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 108218
Query: 259 attaacacaaagtccatgttcactgtctactacaagcc 296
| ||||| ||||||||||||| |||||||||||
Sbjct: 108217 gtgaacactggaaccatgttcactgtgtactacaagcc 108180
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggc 407
||||||||||||| ||||| |||||||| ||||||||
Sbjct: 107900 gggatgagattcaagatgacatttgaaggcgaagaggc 107863
>gb|AACV01024881.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg024881, whole
genome shotgun sequence
Length = 52068
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||||||
Sbjct: 51004 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 50945
Query: 127 ttcctcag 134
|| |||||
Sbjct: 50944 tttctcag 50937
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 199 tcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcg 258
|||||||| ||||| ||||| || |||||||| || |||||||| ||||||||||| ||
Sbjct: 50782 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 50723
Query: 259 attaacacaaagtccatgttcactgtctactacaagcc 296
| ||||| ||||||||||||| |||||||||||
Sbjct: 50722 gtgaacactggaaccatgttcactgtgtactacaagcc 50685
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggc 407
||||||||||||| ||||| |||||||| ||||||||
Sbjct: 50405 gggatgagattcaagatgacatttgaaggcgaagaggc 50368
>gb|CH401280.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000117
genomic scaffold, whole genome shotgun sequence
Length = 1521144
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||||||
Sbjct: 464406 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 464347
Query: 127 ttcctcag 134
|| |||||
Sbjct: 464346 tttctcag 464339
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 199 tcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcg 258
|||||||| ||||| ||||| || |||||||| || |||||||| ||||||||||| ||
Sbjct: 464184 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 464125
Query: 259 attaacacaaagtccatgttcactgtctactacaagcc 296
| ||||| ||||||||||||| |||||||||||
Sbjct: 464124 gtgaacactggaaccatgttcactgtgtactacaagcc 464087
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggc 407
||||||||||||| ||||| |||||||| ||||||||
Sbjct: 463807 gggatgagattcaagatgacatttgaaggcgaagaggc 463770
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||||||
Sbjct: 14466267 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 14466208
Query: 127 ttcctcag 134
|| |||||
Sbjct: 14466207 tttctcag 14466200
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 199 tcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcg 258
|||||||| ||||| ||||| || |||||||| || |||||||| ||||||||||| ||
Sbjct: 14466045 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 14465986
Query: 259 attaacacaaagtccatgttcactgtctactacaagcc 296
| ||||| ||||||||||||| |||||||||||
Sbjct: 14465985 gtgaacactggaaccatgttcactgtgtactacaagcc 14465948
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggc 407
||||||||||||| ||||| |||||||| ||||||||
Sbjct: 14465668 gggatgagattcaagatgacatttgaaggcgaagaggc 14465631
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||||||
Sbjct: 17616163 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 17616104
Query: 127 ttcctcag 134
|| |||||
Sbjct: 17616103 tttctcag 17616096
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 199 tcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcg 258
|||||||| ||||| ||||| || |||||||| || |||||||| ||||||||||| ||
Sbjct: 17615941 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 17615882
Query: 259 attaacacaaagtccatgttcactgtctactacaagcc 296
| ||||| ||||||||||||| |||||||||||
Sbjct: 17615881 gtgaacactggaaccatgttcactgtgtactacaagcc 17615844
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggc 407
||||||||||||| ||||| |||||||| ||||||||
Sbjct: 17615564 gggatgagattcaagatgacatttgaaggcgaagaggc 17615527
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 67 cagagtggttggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcatt 126
||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||||||
Sbjct: 17570534 cagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcata 17570475
Query: 127 ttcctcag 134
|| |||||
Sbjct: 17570474 tttctcag 17570467
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 199 tcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcg 258
|||||||| ||||| ||||| || |||||||| || |||||||| ||||||||||| ||
Sbjct: 17570312 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 17570253
Query: 259 attaacacaaagtccatgttcactgtctactacaagcc 296
| ||||| ||||||||||||| |||||||||||
Sbjct: 17570252 gtgaacactggaaccatgttcactgtgtactacaagcc 17570215
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggc 407
||||||||||||| ||||| |||||||| ||||||||
Sbjct: 17569935 gggatgagattcaagatgacatttgaaggcgaagaggc 17569898
>gb|C25840.1|C25840 C25840 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C10833_1A, mRNA sequence
Length = 380
Score = 63.9 bits (32), Expect = 2e-007
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 199 tcttcggttatatctagccaaagcatgcatctcggggttcttgcgactgcatggcacgcg 258
|||||||| ||||| ||||| || |||||||| || |||||||| ||||||||||| ||
Sbjct: 68 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 127
Query: 259 attaacacaaagtccatgttcactgtctactacaagcctaggac 302
| ||||| ||||||||||||| ||||||||||| |||||
Sbjct: 128 gtgaacactggaaccatgttcactgtgtactacaagccaaggac 171
Score = 46.1 bits (23), Expect = 0.040
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 370 gggatgagattcaggatgaggtttgaaggggaagaggcccccgagcagaggtttactggt 429
||||||||||||| ||||| |||||||| |||||||| | ||||| || || |||||
Sbjct: 239 gggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaagattcactggc 298
Query: 430 acaatagttgg 440
||||| |||||
Sbjct: 299 acaattgttgg 309
>gb|C97649.1|C97649 C97649 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60925_1A, mRNA sequence
Length = 387
Score = 61.9 bits (31), Expect = 7e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 358 aattattctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagca 416
||||| || |||||||||||||| | ||||||||||||||| |||||||| || |||||
Sbjct: 10 aattactccattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagca 68
>dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G16, full
insert sequence
Length = 3106
Score = 50.1 bits (25), Expect = 0.003
Identities = 118/149 (79%)
Strand = Plus / Plus
Query: 16 gagtggcgattccgccacatcttccgcgggcaacccaggaggcatctccttcagagtggt 75
||||||| ||||| |||||||| || || ||||| ||||||||||| ||| | |||
Sbjct: 833 gagtggcatttccgtcacatctttcgaggacaacctaggaggcatctgcttacaactggc 892
Query: 76 tggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcattttcctcaga 135
|||||||||||||| || || ||||| | ||||| || ||||| ||||| || || |||
Sbjct: 893 tggagtgtttttgttagctcaaaaagattagttgccggtgacgcattcatctttctgaga 952
Query: 136 ggagaaaacggtgaacttcgagttggtgt 164
|| || || || || || |||||||||||
Sbjct: 953 ggtgagaatggagagctacgagttggtgt 981
>ref|XM_466220.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3110
Score = 50.1 bits (25), Expect = 0.003
Identities = 118/149 (79%)
Strand = Plus / Plus
Query: 16 gagtggcgattccgccacatcttccgcgggcaacccaggaggcatctccttcagagtggt 75
||||||| ||||| |||||||| || || ||||| ||||||||||| ||| | |||
Sbjct: 833 gagtggcatttccgtcacatctttcgaggacaacctaggaggcatctgcttacaactggc 892
Query: 76 tggagtgtttttgtcagttccaaaaggcttgttgctggagacgccttcattttcctcaga 135
|||||||||||||| || || ||||| | ||||| || ||||| ||||| || || |||
Sbjct: 893 tggagtgtttttgttagctcaaaaagattagttgccggtgacgcattcatctttctgaga 952
Query: 136 ggagaaaacggtgaacttcgagttggtgt 164
|| || || || || || |||||||||||
Sbjct: 953 ggtgagaatggagagctacgagttggtgt 981
>gb|AU030910.2|AU030910 AU030910 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60432_1A, mRNA sequence
Length = 337
Score = 44.1 bits (22), Expect = 0.16
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 19 tggcgattccgccacatcttccgcgggcaacccaggaggcat 60
||||| ||||| |||||||| ||||||||||| |||| ||||
Sbjct: 291 tggcgcttccgtcacatctttcgcgggcaaccgaggaagcat 332
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,268,613
Number of Sequences: 438736
Number of extensions: 1268613
Number of successful extensions: 8353
Number of sequences better than 0.5: 57
Number of HSP's better than 0.5 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7934
Number of HSP's gapped (non-prelim): 409
length of query: 1095
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1074
effective length of database: 2,791,206,460
effective search space: 2997755738040
effective search space used: 2997755738040
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)