BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750753.2.1
(1126 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA ... 763 0.0
dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA... 722 0.0
dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA... 662 0.0
gb|CF307118.1|CF307118 HDA1--05-M22.g1 OsHDAC1-overexpressi... 587 e-165
gb|CF326153.1|CF326153 JMT1--05-D24.g1 AtJMT-overexpressing... 559 e-156
gb|CF306138.1|CF306138 HDA1--02-M21.g1 OsHDAC1-overexpressi... 502 e-139
gb|CF303832.1|CF303832 ABF1--03-F11.g1 ABF3-overexpressing ... 480 e-133
gb|CF304553.1|CF304553 ABF1--05-E20.g1 ABF3-overexpressing ... 480 e-133
gb|CF304781.1|CF304781 ABF1--05-O21.g1 ABF3-overexpressing ... 480 e-133
gb|CF304214.1|CF304214 ABF1--04-F24.g1 ABF3-overexpressing ... 464 e-128
gb|CB647657.1|CB647657 OSJNEb10K20.f OSJNEb Oryza sativa (j... 440 e-121
gb|AU068000.1|AU068000 AU068000 Rice callus Oryza sativa (j... 436 e-119
dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA... 434 e-119
dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA... 434 e-119
gb|CF326332.1|CF326332 JMT1--05-M08.g1 AtJMT-overexpressing... 426 e-116
gb|AC109645.3| Oryza sativa (japonica cultivar-group) chrom... 222 3e-055
ref|NT_107088.1| Oryza sativa (japonica cultivar-group) chr... 222 3e-055
gb|AC134926.3| Oryza sativa (japonica cultivar-group) chrom... 222 3e-055
gb|AC150702.2| Oryza sativa (japonica cultivar-group) chrom... 222 3e-055
gb|AACV01023253.1| Oryza sativa (japonica cultivar-group) c... 222 3e-055
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 222 3e-055
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 222 3e-055
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 222 3e-055
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 222 3e-055
gb|C97649.1|C97649 C97649 Rice callus Oryza sativa (japonic... 216 2e-053
gb|C25840.1|C25840 C25840 Rice callus cDNA Oryza sativa (ja... 194 7e-047
emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC O... 143 2e-031
gb|AACV01024881.1| Oryza sativa (japonica cultivar-group) c... 143 2e-031
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 143 2e-031
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 143 2e-031
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 143 2e-031
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 143 2e-031
gb|AACV01023254.1| Oryza sativa (japonica cultivar-group) c... 119 3e-024
dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA... 92 8e-016
ref|NM_189992.1| Oryza sativa (japonica cultivar-group), p... 92 8e-016
gb|CF305547.1|CF305547 HDA1--01-A10.g1 OsHDAC1-overexpressi... 84 2e-013
gb|CB662485.1|CB662485 OSJNEd06I21.f OSJNEd Oryza sativa (j... 80 3e-012
gb|CF306192.1|CF306192 HDA1--02-P11.g1 OsHDAC1-overexpressi... 80 3e-012
gb|CF303595.1|CF303595 ABF1--02-L06.g1 ABF3-overexpressing ... 72 7e-010
gb|CB636812.1|CB636812 OSJNEa02L16.f OSJNEa Oryza sativa (j... 66 4e-008
gb|CF323190.1|CF323190 HDN--03-C17.g1 OsHDAC1-overexpressin... 66 4e-008
gb|AACV01002980.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 62 7e-007
dbj|AP004332.3| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
dbj|AK064925.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromoso... 58 1e-005
gb|AACV01009842.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_466220.1| Oryza sativa (japonica cultivar-group), mRNA 58 1e-005
ref|XM_472625.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NT_079861.2| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromoso... 58 1e-005
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AK064007.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK102521.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
gb|AACV01000533.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|NM_188673.1| Oryza sativa (japonica cultivar-group), Oz... 54 2e-004
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP001539.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP004793.1| Oryza sativa (japonica cultivar-group) chro... 52 7e-004
dbj|AP005808.3| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|AACV01004674.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 52 7e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|CB637168.1|CB637168 OSJNEa03G21.f OSJNEa Oryza sativa (j... 50 0.003
gb|CB638688.1|CB638688 OSJNEa07E15.f OSJNEa Oryza sativa (j... 46 0.041
gb|CB639817.1|CB639817 OSJNEa12B11.f OSJNEa Oryza sativa (j... 46 0.041
gb|AU030910.2|AU030910 AU030910 Rice cDNA from immature lea... 46 0.041
dbj|AK065025.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.041
dbj|AK103105.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.041
dbj|AK103452.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.041
dbj|AK121703.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.041
emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC O... 46 0.041
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 46 0.041
gb|AACV01025520.1| Oryza sativa (japonica cultivar-group) c... 46 0.041
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.041
gb|C71932.1|C71932 C71932 Rice panicle at flowering stage O... 44 0.16
>emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA for auxin response factor 1 (arf1
gene)
Length = 2511
Score = 763 bits (385), Expect = 0.0
Identities = 659/748 (88%), Gaps = 3/748 (0%)
Strand = Plus / Plus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 376 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 435
Query: 101 ggattctcggtgctgcggcgccatgcagatgagtgtcttccgccactggatatgacccgt 160
|| |||||||||||||| ||||| || || || || || || ||||||||||||| ||||
Sbjct: 436 ggcttctcggtgctgcgacgccacgcggacgaatgcctcccaccactggatatgagccgt 495
Query: 161 caacctccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgc 220
|| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||
Sbjct: 496 cagcctccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctttcgt 555
Query: 221 cacatattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgtt 280
|||||||||||||||||||||||||| || ||||||||||||||||||||||| || |||
Sbjct: 556 cacatattcagaggtcaaccacgaagacaccttttgcagagtggctggagtgtgttcgtt 615
Query: 281 agtgccaagcgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggag 340
|||||||| || |||| |||||| |||||||| |||||||| |||||||| | |||||
Sbjct: 616 agtgccaaacggcttgttgctggggatgcctttatctttctcagaggtgagaacggggaa 675
Query: 341 cttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaata 400
|| ||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||
Sbjct: 676 ctgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgata 735
Query: 401 tcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactggg 460
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 736 tcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaacacaggg 795
Query: 461 accatgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccct 520
|||||||| |||||||||||||||||||||||||| |||||| |||||||| || || |
Sbjct: 796 accatgttcactgtctactacaagcctaggacaag--tccagccgagtttgtggtccctt 853
Query: 521 gtgatcgctatatggaatcactgaaacgaaattaccctatagggatgagatttaaaatga 580
||||||||||||||||||||||||| ||||||| | || |||||||||||||| ||||
Sbjct: 854 acgatcgctatatggaatcactgaaacaaaattactccattgggatgagatttaagatga 913
Query: 581 ggttt-aaggtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtgg 639
||||| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| | ||
Sbjct: 914 ggtttgaaggtgaagaggctccagagcaaagattcactgggactattgtcggaatggggg 973
Query: 640 atcctgatcaagctggatgggctgaatctaaatggcgttacctcaaggtgaggtgggatg 699
|| |||||| |||||| ||| ||||||| |||||||| | ||| |||||||| |||||||
Sbjct: 974 attctgatccagctggctggcctgaatcaaaatggcgctcccttaaggtgagatgggatg 1033
Query: 700 aagcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtca 759
||||||| ||||| || || |||||||| |||||||||||||||||||||||||| || |
Sbjct: 1034 aagcttcttccatacctcgccctgaaagagtttctccctggcaaatagaacctgctgtaa 1093
Query: 760 gccctccccctatcaacccgcttccagt 787
||||||| ||| ||||||| || |||||
Sbjct: 1094 gccctcctcctgtcaacccactaccagt 1121
>dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091N24, full
insert sequence
Length = 3981
Score = 722 bits (364), Expect = 0.0
Identities = 617/699 (88%), Gaps = 3/699 (0%)
Strand = Plus / Plus
Query: 90 gcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtcttccgccactgg 149
|||| ||||| || |||||||||||||| ||||| || || || || || || |||||||
Sbjct: 1516 gcacacatggcggcttctcggtgctgcgacgccacgcggacgaatgcctcccaccactgg 1575
Query: 150 atatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtggaat 209
|||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 1576 atatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtggaat 1635
Query: 210 ggcgctttcgccacatattcagaggtcaaccacgaaggcatcttttgcagagtggctgga 269
|||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1636 ggcgctttcgtcacatattcagaggtcaaccacgaagacaccttttgcagagtggctgga 1695
Query: 270 gtgtttttgttagtgccaagcgtcttggtgctggagatgccttcatctttctaagaggtg 329
|||| |||||||||||||| || |||| |||||| |||||||| |||||||| |||||||
Sbjct: 1696 gtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatctttctcagaggtg 1755
Query: 330 atagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccat 389
| | ||||| || ||||| |||||||||||||| |||||||||||| | ||||||||||
Sbjct: 1756 agaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccat 1815
Query: 390 cttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctg 449
||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1816 cttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctg 1875
Query: 450 ttaacactgggaccatgtttactgtctactacaagcctaggacaagtctccagctgagtt 509
||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct: 1876 ttaacacagggaccatgttcactgtctactacaagcctaggacaag--tccagccgagtt 1933
Query: 510 tgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccctatagggatgag 569
||| || || | ||||||||||||||||||||||||| ||||||| | || ||||||||
Sbjct: 1934 tgtggtcccttacgatcgctatatggaatcactgaaacaaaattactccattgggatgag 1993
Query: 570 atttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgggaccattgt 628
|||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 1994 atttaagatgaggtttgaaggtgaagaggctccagagcaaagattcactgggactattgt 2053
Query: 629 tggaaatgtggatcctgatcaagctggatgggctgaatctaaatggcgttacctcaaggt 688
|||| | |||| |||||| |||||| ||| ||||||| |||||||| | ||| |||||
Sbjct: 2054 cggaatgggggattctgatccagctggctggcctgaatcaaaatggcgctcccttaaggt 2113
Query: 689 gaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaataga 748
||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||||||
Sbjct: 2114 gagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaataga 2173
Query: 749 acctgcagtcagccctccccctatcaacccgcttccagt 787
|||||| || |||||||| ||| ||||||| || |||||
Sbjct: 2174 acctgctgtaagccctcctcctgtcaacccactaccagt 2212
>dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A03, full
insert sequence
Length = 3338
Score = 662 bits (334), Expect = 0.0
Identities = 563/637 (88%), Gaps = 3/637 (0%)
Strand = Plus / Plus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 658 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 717
Query: 101 ggattctcggtgctgcggcgccatgcagatgagtgtcttccgccactggatatgacccgt 160
|| |||||||||||||| ||||| || || || || || || ||||||||||||| ||||
Sbjct: 718 ggcttctcggtgctgcgacgccacgcggacgaatgcctcccaccactggatatgagccgt 777
Query: 161 caacctccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgc 220
|| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||
Sbjct: 778 cagcctccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctttcgt 837
Query: 221 cacatattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgtt 280
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 838 cacatattcagaggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgtt 897
Query: 281 agtgccaagcgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggag 340
|||||||| || |||| |||||| |||||||| |||||||| |||||||| | |||||
Sbjct: 898 agtgccaaacggcttgttgctggggatgcctttatctttctcagaggtgagaacggggaa 957
Query: 341 cttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaata 400
|| ||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||
Sbjct: 958 ctgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgata 1017
Query: 401 tcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactggg 460
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 1018 tcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaacacaggg 1077
Query: 461 accatgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccct 520
|||||||| |||||||||||||||||||||||||| |||||| |||||||| || || |
Sbjct: 1078 accatgttcactgtctactacaagcctaggacaag--tccagccgagtttgtggtccctt 1135
Query: 521 gtgatcgctatatggaatcactgaaacgaaattaccctatagggatgagatttaaaatga 580
||||||||||||||||||||||||| ||||||| | || | |||||||||||| ||||
Sbjct: 1136 acgatcgctatatggaatcactgaaacaaaattactccattgagatgagatttaagatga 1195
Query: 581 ggttt-aaggtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtgg 639
||||| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| | ||
Sbjct: 1196 ggtttgaaggtgaagaggctccagagcaaagattcactgggactattgtcggaatggggg 1255
Query: 640 atcctgatcaagctggatgggctgaatctaaatggcg 676
|| |||||| |||||| ||| ||||||| ||||||||
Sbjct: 1256 attctgatccagctggctggcctgaatcaaaatggcg 1292
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 1378 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 1437
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 1438 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 1480
>gb|CF307118.1|CF307118 HDA1--05-M22.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--05-M22, mRNA sequence
Length = 587
Score = 587 bits (296), Expect = e-165
Identities = 461/515 (89%), Gaps = 2/515 (0%)
Strand = Plus / Plus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 63 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 122
Query: 101 ggattctcggtgctgcggcgccatgcagatgagtgtcttccgccactggatatgacccgt 160
|| |||||||||||||| ||||| ||||| || || || || ||||||||||||| ||||
Sbjct: 123 ggcttctcggtgctgcgacgccacgcagacgaatgcctcccaccactggatatgagccgt 182
Query: 161 caacctccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgc 220
|| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||
Sbjct: 183 cagcctccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctttcgt 242
Query: 221 cacatattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgtt 280
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 243 cacatattcagaggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgtt 302
Query: 281 agtgccaagcgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggag 340
|||||||| || |||| |||||| |||||||| |||||||| |||||||| | |||||
Sbjct: 303 agtgccaaacggcttgttgctggggatgcctttatctttctcagaggtgagaacggggaa 362
Query: 341 cttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaata 400
|| ||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||
Sbjct: 363 ctgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgata 422
Query: 401 tcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactggg 460
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 423 tcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaacacaggg 482
Query: 461 accatgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccct 520
|||||||| |||||||||||||||||||||||||| |||||| |||||||| || || |
Sbjct: 483 accatgttcactgtctactacaagcctaggacaag--tccagccgagtttgtggtccctt 540
Query: 521 gtgatcgctatatggaatcactgaaacgaaattac 555
|||||||||||||||||||||||||||||||||
Sbjct: 541 acgatcgctatatggaatcactgaaacgaaattac 575
>gb|CF326153.1|CF326153 JMT1--05-D24.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-D24, mRNA sequence
Length = 664
Score = 559 bits (282), Expect = e-156
Identities = 461/517 (89%), Gaps = 4/517 (0%)
Strand = Plus / Plus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 146 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 205
Query: 101 ggattctcggtgctgcggcgccatgcagatgagtgtcttccgccactggatatgacccgt 160
|| |||||||||||||| ||||| ||||| || || || || ||||||||||||| ||||
Sbjct: 206 ggcttctcggtgctgcgacgccacgcagacgaatgcctcccaccactggatatgagccgt 265
Query: 161 caacctccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgc 220
|| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||
Sbjct: 266 cagcctccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctttcgt 325
Query: 221 cacatattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgtt 280
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 326 cacatattcagaggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgtt 385
Query: 281 agtgccaagcgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggag 340
|||||||| || |||| |||||| |||||||| |||||||| |||||||| | |||||
Sbjct: 386 agtgccaaacggcttgttgctggggatgcctttatctttctcagaggtgagaacggggaa 445
Query: 341 cttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaata 400
|| ||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||
Sbjct: 446 ctgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgata 505
Query: 401 tcaagccacagcatgcatcttggtg-ttcttgctacagcatggcatgctgttaacactgg 459
||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||
Sbjct: 506 tcaagccacagcatgcatcttgggggttcttgccacagcatggcatgctgttaacacagg 565
Query: 460 gaccatgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccc 519
||||||||| |||||||||||||||||||||||||||| |||| |||||| || ||||
Sbjct: 566 gaccatgttcactgtctactacaagcctaggacaagtc--cagccgagttttgtggtccc 623
Query: 520 tgt-gatcgctatatggaatcactgaaacgaaattac 555
| |||||||||||||||||||||||||||||||||
Sbjct: 624 ttacgatcgctatatggaatcactgaaacgaaattac 660
>gb|CF306138.1|CF306138 HDA1--02-M21.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--02-M21, mRNA sequence
Length = 556
Score = 502 bits (253), Expect = e-139
Identities = 462/528 (87%), Gaps = 4/528 (0%)
Strand = Plus / Plus
Query: 213 gctttcgccacatattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtg 272
||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 32 gctttcgacacatcttcagaggtcaaccacgaagacaccttttgcagagtggctggagtg 91
Query: 273 tttttgttagtgccaagcgtcttggtgctggagatgccttcatctttctaagaggtgata 332
| |||||||||||||| || |||| |||||| |||||||| |||||||| |||||||| |
Sbjct: 92 tgtttgttagtgccaaacggcttgttgctggggatgcctttatctttctcagaggtgaga 151
Query: 333 gtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatctt 392
||||| || ||||| | |||||||| |||||||||||| | |||||||||||||
Sbjct: 152 acggggaactgcgtgttttttt-aggcgtgcaatgaggcagcaaactaatgttccatctt 210
Query: 393 cagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgtta 452
|| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 211 cattgttatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgtta 270
Query: 453 acactgggaccatgtttactgtctactacaagcctaggacaagtctccagctgagtttgt 512
|||| ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 271 acacagggaccatgttcactgtctactacaagcctaggacaag--tccagccgagtttgt 328
Query: 513 tgttccctgtgatcgctatatggaatcactgaaacgaaattaccctatagggatgagatt 572
|| || | ||||||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 329 ggtcccttacgatcgctatatggaatcactgaaacgaaattactccattgggatgagatt 388
Query: 573 taaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgggaccattgttgg 631
||| ||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 389 taagatgaggtttgaaggtgaagaggctccagagcaaagattcactgggactattgtcgg 448
Query: 632 aaatgtggatcctgatcaagctggatgggctgaatctaaatggcgttacctcaaggtgag 691
|| | |||| |||||| |||||| ||| ||||||| |||||||| | ||| ||||||||
Sbjct: 449 aatgggggattctgatccagctggctggcctgaatcaaaatggcgctcccttaaggtgag 508
Query: 692 gtgggatgaagcttcctccattccacgtcctgaaagggtttctccctg 739
|||||||||||||| ||||| || || |||||||| |||||||||||
Sbjct: 509 atgggatgaagcttcttccatacctcgccctgaaagagtttctccctg 556
>gb|CF303832.1|CF303832 ABF1--03-F11.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-F11, mRNA sequence
Length = 566
Score = 480 bits (242), Expect = e-133
Identities = 396/445 (88%), Gaps = 3/445 (0%)
Strand = Plus / Plus
Query: 344 cgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatca 403
||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct: 15 cgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatca 74
Query: 404 agccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactgggacc 463
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 75 agccacagcatgcatcttggggttcttgccacagcatggcatgctgttaacacagggacc 134
Query: 464 atgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccctgtg 523
||||| |||||||||||||||||||||||||| |||||| |||||||| || || | |
Sbjct: 135 atgttcactgtctactacaagcctaggacaag--tccagccgagtttgtggtcccttacg 192
Query: 524 atcgctatatggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggt 583
|||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||
Sbjct: 193 atcgctatatggaatcactgaaacgaaattactccattgggatgagatttaagatgaggt 252
Query: 584 tt-aaggtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtggatc 642
|| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| | ||||
Sbjct: 253 ttgaaggtgaagaggctccagagcaaagattcactgggactattgtcggaatgggggatt 312
Query: 643 ctgatcaagctggatgggctgaatctaaatggcgttacctcaaggtgaggtgggatgaag 702
|||||| |||||| ||| ||||||| |||||||| | ||| |||||||| ||||||||||
Sbjct: 313 ctgatccagctggctggcctgaatcaaaatggcgctcccttaaggtgagatgggatgaag 372
Query: 703 cttcctccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagcc 762
|||| ||||| || || |||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 373 cttcttccatacctcgccctgaaagagtttctccctggcaaatagaacctgctgtaagcc 432
Query: 763 ctccccctatcaacccgcttccagt 787
|||| ||| ||||||| || |||||
Sbjct: 433 ctcctcctgtcaacccactaccagt 457
>gb|CF304553.1|CF304553 ABF1--05-E20.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--05-E20, mRNA sequence
Length = 568
Score = 480 bits (242), Expect = e-133
Identities = 396/445 (88%), Gaps = 3/445 (0%)
Strand = Plus / Plus
Query: 344 cgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatca 403
||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct: 15 cgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatca 74
Query: 404 agccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactgggacc 463
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 75 agccacagcatgcatcttggggttcttgccacagcatggcatgctgttaacacagggacc 134
Query: 464 atgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccctgtg 523
||||| |||||||||||||||||||||||||| |||||| |||||||| || || | |
Sbjct: 135 atgttcactgtctactacaagcctaggacaag--tccagccgagtttgtggtcccttacg 192
Query: 524 atcgctatatggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggt 583
|||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||
Sbjct: 193 atcgctatatggaatcactgaaacgaaattactccattgggatgagatttaagatgaggt 252
Query: 584 tt-aaggtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtggatc 642
|| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| | ||||
Sbjct: 253 ttgaaggtgaagaggctccagagcaaagattcactgggactattgtcggaatgggggatt 312
Query: 643 ctgatcaagctggatgggctgaatctaaatggcgttacctcaaggtgaggtgggatgaag 702
|||||| |||||| ||| ||||||| |||||||| | ||| |||||||| ||||||||||
Sbjct: 313 ctgatccagctggctggcctgaatcaaaatggcgctcccttaaggtgagatgggatgaag 372
Query: 703 cttcctccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagcc 762
|||| ||||| || || |||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 373 cttcttccatacctcgccctgaaagagtttctccctggcaaatagaacctgctgtaagcc 432
Query: 763 ctccccctatcaacccgcttccagt 787
|||| ||| ||||||| || |||||
Sbjct: 433 ctcctcctgtcaacccactaccagt 457
>gb|CF304781.1|CF304781 ABF1--05-O21.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--05-O21, mRNA sequence
Length = 568
Score = 480 bits (242), Expect = e-133
Identities = 396/445 (88%), Gaps = 3/445 (0%)
Strand = Plus / Plus
Query: 344 cgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatca 403
||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct: 15 cgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatca 74
Query: 404 agccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactgggacc 463
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 75 agccacagcatgcatcttggggttcttgccacagcatggcatgctgttaacacagggacc 134
Query: 464 atgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccctgtg 523
||||| |||||||||||||||||||||||||| |||||| |||||||| || || | |
Sbjct: 135 atgttcactgtctactacaagcctaggacaag--tccagccgagtttgtggtcccttacg 192
Query: 524 atcgctatatggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggt 583
|||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||
Sbjct: 193 atcgctatatggaatcactgaaacgaaattactccattgggatgagatttaagatgaggt 252
Query: 584 tt-aaggtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtggatc 642
|| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| | ||||
Sbjct: 253 ttgaaggtgaagaggctccagagcaaagattcactgggactattgtcggaatgggggatt 312
Query: 643 ctgatcaagctggatgggctgaatctaaatggcgttacctcaaggtgaggtgggatgaag 702
|||||| |||||| ||| ||||||| |||||||| | ||| |||||||| ||||||||||
Sbjct: 313 ctgatccagctggctggcctgaatcaaaatggcgctcccttaaggtgagatgggatgaag 372
Query: 703 cttcctccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagcc 762
|||| ||||| || || |||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 373 cttcttccatacctcgccctgaaagagtttctccctggcaaatagaacctgctgtaagcc 432
Query: 763 ctccccctatcaacccgcttccagt 787
|||| ||| ||||||| || |||||
Sbjct: 433 ctcctcctgtcaacccactaccagt 457
>gb|CF304214.1|CF304214 ABF1--04-F24.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-F24, mRNA sequence
Length = 581
Score = 464 bits (234), Expect = e-128
Identities = 394/445 (88%), Gaps = 3/445 (0%)
Strand = Plus / Plus
Query: 344 cgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatca 403
||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct: 15 cgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatca 74
Query: 404 agccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactgggacc 463
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 75 agccacagcatgcatcttggggttcttgccacagcatggcatgctgttaacacagggacc 134
Query: 464 atgtttactgtctactacaagcctaggacaagtctccagctgagtttgttgttccctgtg 523
||||| |||||||||||| | ||||||||||| |||||| |||||||| || || | |
Sbjct: 135 atgttcactgtctactactatcctaggacaag--tccagccgagtttgtggtcccttacg 192
Query: 524 atcgctatatggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggt 583
|||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||
Sbjct: 193 atcgctatatggaatcactgaaacgaaattactccattgggatgagatttaagatgaggt 252
Query: 584 tt-aaggtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtggatc 642
|| ||||||||||||||||||| ||||| ||||||||||| ||||| |||| | ||||
Sbjct: 253 ttgaaggtgaagaggctccagagcaaagattcactgggactattgtcggaatgggggatt 312
Query: 643 ctgatcaagctggatgggctgaatctaaatggcgttacctcaaggtgaggtgggatgaag 702
|||||| |||||| ||| ||||||| |||||||| | ||| |||||||| ||||||||||
Sbjct: 313 ctgatccagctggctggcctgaatcaaaatggcgctcccttaaggtgagatgggatgaag 372
Query: 703 cttcctccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagcc 762
|||| ||||| || || |||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 373 cttcttccatacctcgccctgaaagagtttctccctggcaaatagaacctgctgtaagcc 432
Query: 763 ctccccctatcaacccgcttccagt 787
|||| ||| ||||||| || |||||
Sbjct: 433 ctcctcctgtcaacccactaccagt 457
>gb|CB647657.1|CB647657 OSJNEb10K20.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10K20 5', mRNA sequence
Length = 684
Score = 440 bits (222), Expect = e-121
Identities = 382/433 (88%), Gaps = 3/433 (0%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct: 22 aggcgtgcaatgaggcagcaaactaatgttccatcttcagtgatatcaagccacagcatg 81
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| |||||||| ||||||||||||||||||||||| |||||| |||| ||||||
Sbjct: 82 catcttggggttcttgccacagcatggcatgctgttaacacagggaccgtgttcactgtc 141
Query: 476 tactacaagcctaggacaagtctccagctgagtttgttgttccctgtgatcgctatatgg 535
|||||||||||||||||||| |||||| |||||||| || || | |||||||||||||
Sbjct: 142 tactacaagcctaggacaag--tccagccgagtttgtggtcccttacgatcgctatatgg 199
Query: 536 aatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtgaag 594
|||||||||||| ||||||| | || |||||||||||||| ||||||||| |||||||||
Sbjct: 200 aatcactgaaacaaaattactccattgggatgagatttaagatgaggtttgaaggtgaag 259
Query: 595 aggctccagaacaaaggttcactgggaccattgttggaaatgtggatcctgatcaagctg 654
|||||||| | ||||| ||||||||||| ||||| |||| | |||| |||||| |||||
Sbjct: 260 aggctccacagcaaagattcactgggactattgtcggaatgggggattctgatccagctg 319
Query: 655 gatgggctgaatctaaatggcgttacctcaaggtgaggtgggatgaagcttcctccattc 714
| ||| ||||||| |||||||| | ||| |||||||| |||||||||||||| ||||| |
Sbjct: 320 gctggcctgaatcaaaatggcgctcccttaaggtgagatgggatgaagcttcttccatac 379
Query: 715 cacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagccctccccctatca 774
| || |||||||| |||||||||||||||||||||||||| || |||||||| ||| |||
Sbjct: 380 ctcgccctgaaagagtttctccctggcaaatagaacctgctgtaagccctcctcctgtca 439
Query: 775 acccgcttccagt 787
|||| || |||||
Sbjct: 440 acccactaccagt 452
>gb|AU068000.1|AU068000 AU068000 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11460_7A, mRNA sequence
Length = 379
Score = 436 bits (220), Expect = e-119
Identities = 325/359 (90%), Gaps = 2/359 (0%)
Strand = Plus / Plus
Query: 189 aggacctgcatggtgtggaatggcgctttcgccacatattcagaggtcaaccacgaaggc 248
|||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 22 aggatctgcacggtgtggaatggcgctttcgtcacatattcagaggtcaaccacgaagac 81
Query: 249 atcttttgcagagtggctggagtgtttttgttagtgccaagcgtcttggtgctggagatg 308
| ||||||||||||||||||||||| |||||||||||||| || |||| |||||| ||||
Sbjct: 82 accttttgcagagtggctggagtgtgtttgttagtgccaaacggcttgttgctggggatg 141
Query: 309 ccttcatctttctaagaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatga 368
|||| |||||||| |||||||| | ||||| || ||||| |||||||||||||| ||||
Sbjct: 142 cctttatctttctcagaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatga 201
Query: 369 ggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttc 428
|||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 202 ggcagcaaactaatgttccatcttcagtgatatcaagccacagcatgcatcttggggttc 261
Query: 429 ttgctacagcatggcatgctgttaacactgggaccatgtttactgtctactacaagccta 488
|||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 262 ttgccacagcatggcatgctgttaacacagggaccatgttcactgtctactacaagccta 321
Query: 489 ggacaagtctccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaac 547
||||||| |||||| |||||||| || || | |||||||||||||||||||||||||
Sbjct: 322 ggacaag--tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaac 378
>dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J11, full
insert sequence
Length = 3100
Score = 434 bits (219), Expect = e-119
Identities = 610/738 (82%), Gaps = 3/738 (0%)
Strand = Plus / Plus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 573 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 632
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactggatatgacccgtcaacctcca 169
|||||||| || || || |||||||| || || ||||||||||||| | || || |||
Sbjct: 633 gtgctgcgccggcacgcggatgagtgcctcccaccactggatatgagtcagcatccccca 692
Query: 170 acacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattc 229
||||||||||| || |||||||| || ||||| || || |||||||| || ||||| |||
Sbjct: 693 acacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatcttc 752
Query: 230 agaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaag 289
||||||| |||||||| || ||| | |||||||| |||||||||||||| ||||||||
Sbjct: 753 cgaggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaa 812
Query: 290 cgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgta 349
|| |||| |||||||||||||||||| ||||| |||||||| | |||||| || || ||
Sbjct: 813 cgccttgttgctggagatgccttcatatttctcagaggtgagaatggggaactacgagtt 872
Query: 350 ggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccac 409
||||| ||||||| ||||| || ||||| ||| |||||||||| || ||||||||||||
Sbjct: 873 ggagttcggcgtgcaatgagacaacaagctaatattccatcttcggtcatatcaagccac 932
Query: 410 agcatgcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgttt 469
|| |||||||||||||||||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 933 agtatgcatcttggtgttcttgcaactgcatggcatgcagtgaacactggaaccatgttc 992
Query: 470 actgtctactacaagcctaggacaagtctccagctgagtttgttgttccctgtgatcgct 529
||||| ||||||||||| ||||| || |||| |||| ||||| || || |||||| |
Sbjct: 993 actgtgtactacaagccaaggactag--tccatctgaatttgtggtaccacgtgatctgt 1050
Query: 530 atatggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aag 588
| | |||||| |||||||||||| | | |||||||||||||| || |||| ||| |||
Sbjct: 1051 acaaggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaag 1110
Query: 589 gtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtggatcctgatc 648
| ||||||||| |||| ||||| |||||||| || ||||||||| | ||| |||| |
Sbjct: 1111 gcgaagaggctgcagagcaaagattcactggcacaattgttggagtaggtgattctgacc 1170
Query: 649 aagctggatgggctgaatctaaatggcgttacctcaaggtgaggtgggatgaagcttcct 708
| |||| |||||||| || |||||||||| ||| |||||| | |||||||||||| | |
Sbjct: 1171 catctggttgggctgactcaaaatggcgttcccttaaggtgcgatgggatgaagctgctt 1230
Query: 709 ccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagccctcccc 768
| |||| |||||||| ||||||||||| ||||||||||||||||| ||||||| |||
Sbjct: 1231 ctgttcctcgtcctgatagggtttctccttggcaaatagaacctgctaacagcccttccc 1290
Query: 769 ctatcaacccgcttccag 786
|| ||||||| |||||||
Sbjct: 1291 ctgtcaaccctcttccag 1308
>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full
insert sequence
Length = 3265
Score = 434 bits (219), Expect = e-119
Identities = 610/738 (82%), Gaps = 3/738 (0%)
Strand = Plus / Plus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 719 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 778
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactggatatgacccgtcaacctcca 169
|||||||| || || || |||||||| || || ||||||||||||| | || || |||
Sbjct: 779 gtgctgcgccggcacgcggatgagtgcctcccaccactggatatgagtcagcatccccca 838
Query: 170 acacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattc 229
||||||||||| || |||||||| || ||||| || || |||||||| || ||||| |||
Sbjct: 839 acacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatcttc 898
Query: 230 agaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaag 289
||||||| |||||||| || ||| | |||||||| |||||||||||||| ||||||||
Sbjct: 899 cgaggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaa 958
Query: 290 cgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgta 349
|| |||| |||||||||||||||||| ||||| |||||||| | |||||| || || ||
Sbjct: 959 cgccttgttgctggagatgccttcatatttctcagaggtgagaatggggaactacgagtt 1018
Query: 350 ggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccac 409
||||| ||||||| ||||| || ||||| ||| |||||||||| || ||||||||||||
Sbjct: 1019 ggagttcggcgtgcaatgagacaacaagctaatattccatcttcggtcatatcaagccac 1078
Query: 410 agcatgcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgttt 469
|| |||||||||||||||||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 1079 agtatgcatcttggtgttcttgcaactgcatggcatgcagtgaacactggaaccatgttc 1138
Query: 470 actgtctactacaagcctaggacaagtctccagctgagtttgttgttccctgtgatcgct 529
||||| ||||||||||| ||||| || |||| |||| ||||| || || |||||| |
Sbjct: 1139 actgtgtactacaagccaaggactag--tccatctgaatttgtggtaccacgtgatctgt 1196
Query: 530 atatggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aag 588
| | |||||| |||||||||||| | | |||||||||||||| || |||| ||| |||
Sbjct: 1197 acaaggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaag 1256
Query: 589 gtgaagaggctccagaacaaaggttcactgggaccattgttggaaatgtggatcctgatc 648
| ||||||||| |||| ||||| |||||||| || ||||||||| | ||| |||| |
Sbjct: 1257 gcgaagaggctgcagagcaaagattcactggcacaattgttggagtaggtgattctgacc 1316
Query: 649 aagctggatgggctgaatctaaatggcgttacctcaaggtgaggtgggatgaagcttcct 708
| |||| |||||||| || |||||||||| ||| |||||| | |||||||||||| | |
Sbjct: 1317 catctggttgggctgactcaaaatggcgttcccttaaggtgcgatgggatgaagctgctt 1376
Query: 709 ccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagccctcccc 768
| |||| |||||||| ||||||||||| ||||||||||||||||| ||||||| |||
Sbjct: 1377 ctgttcctcgtcctgatagggtttctccttggcaaatagaacctgctaacagcccttccc 1436
Query: 769 ctatcaacccgcttccag 786
|| ||||||| |||||||
Sbjct: 1437 ctgtcaaccctcttccag 1454
>gb|CF326332.1|CF326332 JMT1--05-M08.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-M08, mRNA sequence
Length = 529
Score = 426 bits (215), Expect = e-116
Identities = 341/383 (89%)
Strand = Plus / Plus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 146 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 205
Query: 101 ggattctcggtgctgcggcgccatgcagatgagtgtcttccgccactggatatgacccgt 160
|| |||||||||||||| ||||| ||||| || || || || ||||||||||||| ||||
Sbjct: 206 ggcttctcggtgctgcgacgccacgcagacgaatgcctcccaccactggatatgagccgt 265
Query: 161 caacctccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgc 220
|| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||
Sbjct: 266 cagcctccaacacaagagctggtggccaaggatctgcacggtgtggaatggcgctttcgt 325
Query: 221 cacatattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgtt 280
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 326 cacatattcagaggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgtt 385
Query: 281 agtgccaagcgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggag 340
|||||||| || |||| |||||| |||||||| |||||||| |||||||| | |||||
Sbjct: 386 agtgccaaacggcttgttgctggggatgcctttatctttctcagaggtgagaacggggaa 445
Query: 341 cttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaata 400
|| ||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||
Sbjct: 446 ctgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttcagtgata 505
Query: 401 tcaagccacagcatgcatcttgg 423
|||||||||||||||||||||||
Sbjct: 506 tcaagccacagcatgcatcttgg 528
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09,
complete sequence
Length = 43883
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 40208 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 40149
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 40148 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 40089
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 40088 acagggaccatgttcactgtctactacaagcctagg 40053
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 41017 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 40958
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 40957 atggcgctttcgtcacatattcagaggt 40930
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 39870 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 39811
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 39810 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 39755
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 40399 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 40340
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 40339 gcttgttgctggggatgcctttatctttct 40310
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 39515 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 39456
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 39455 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 39413
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 41239 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 41180
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 41179 ggcttctcggtgctgcgacgcca 41157
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 39665 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 39606
Query: 672 tggcg 676
|||||
Sbjct: 39605 tggcg 39601
>ref|NT_107088.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09,
complete sequence
Length = 43883
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 40208 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 40149
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 40148 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 40089
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 40088 acagggaccatgttcactgtctactacaagcctagg 40053
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 41017 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 40958
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 40957 atggcgctttcgtcacatattcagaggt 40930
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 39870 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 39811
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 39810 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 39755
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 40399 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 40340
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 40339 gcttgttgctggggatgcctttatctttct 40310
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 39515 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 39456
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 39455 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 39413
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 41239 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 41180
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 41179 ggcttctcggtgctgcgacgcca 41157
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 39665 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 39606
Query: 672 tggcg 676
|||||
Sbjct: 39605 tggcg 39601
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0056I10, complete sequence
Length = 158833
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 8314 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 8255
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 8254 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 8195
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 8194 acagggaccatgttcactgtctactacaagcctagg 8159
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 9123 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 9064
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 9063 atggcgctttcgtcacatattcagaggt 9036
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 7976 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 7917
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 7916 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 7861
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 8505 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 8446
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 8445 gcttgttgctggggatgcctttatctttct 8416
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 7621 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 7562
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 7561 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 7519
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 9345 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 9286
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 9285 ggcttctcggtgctgcgacgcca 9263
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 7771 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 7712
Query: 672 tggcg 676
|||||
Sbjct: 7711 tggcg 7707
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08,
complete sequence
Length = 136853
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 131545 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 131486
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 131485 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 131426
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 131425 acagggaccatgttcactgtctactacaagcctagg 131390
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 132354 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 132295
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 132294 atggcgctttcgtcacatattcagaggt 132267
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 131207 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 131148
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 131147 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 131092
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 131736 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 131677
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 131676 gcttgttgctggggatgcctttatctttct 131647
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 130852 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 130793
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 130792 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 130750
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 132576 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 132517
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 132516 ggcttctcggtgctgcgacgcca 132494
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 131002 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 130943
Query: 672 tggcg 676
|||||
Sbjct: 130942 tggcg 130938
>gb|AACV01023253.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023253, whole
genome shotgun sequence
Length = 21782
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 21233 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 21174
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 21173 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 21114
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 21113 acagggaccatgttcactgtctactacaagcctagg 21078
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 20895 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 20836
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 20835 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 20780
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 21424 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 21365
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 21364 gcttgttgctggggatgcctttatctttct 21335
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 20540 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 20481
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 20480 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 20438
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 20690 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 20631
Query: 672 tggcg 676
|||||
Sbjct: 20630 tggcg 20626
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101
genomic scaffold, whole genome shotgun sequence
Length = 5106408
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 982063 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 982004
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 982003 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 981944
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 981943 acagggaccatgttcactgtctactacaagcctagg 981908
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 982976 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 982917
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 982916 atggcgctttcgtcacatattcagaggt 982889
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 981725 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 981666
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 981665 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 981610
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 982254 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 982195
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 982194 gcttgttgctggggatgcctttatctttct 982165
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 981370 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 981311
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 981310 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 981268
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 983198 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 983139
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 983138 ggcttctcggtgctgcgacgcca 983116
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 981520 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 981461
Query: 672 tggcg 676
|||||
Sbjct: 981460 tggcg 981456
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 15147045 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 15146986
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 15146985 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 15146926
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 15146925 acagggaccatgttcactgtctactacaagcctagg 15146890
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 15147958 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 15147899
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 15147898 atggcgctttcgtcacatattcagaggt 15147871
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 15146707 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 15146648
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 15146647 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 15146592
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 15147236 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 15147177
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 15147176 gcttgttgctggggatgcctttatctttct 15147147
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 15146352 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 15146293
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 15146292 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 15146250
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 15148180 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 15148121
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 15148120 ggcttctcggtgctgcgacgcca 15148098
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 15146502 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 15146443
Query: 672 tggcg 676
|||||
Sbjct: 15146442 tggcg 15146438
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 18272949 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 18272890
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 18272889 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 18272830
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 18272829 acagggaccatgttcactgtctactacaagcctagg 18272794
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 18273758 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 18273699
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 18273698 atggcgctttcgtcacatattcagaggt 18273671
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 18272611 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 18272552
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 18272551 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 18272496
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 18273140 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 18273081
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 18273080 gcttgttgctggggatgcctttatctttct 18273051
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 18272256 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 18272197
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 18272196 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 18272154
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 18273980 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 18273921
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 18273920 ggcttctcggtgctgcgacgcca 18273898
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 18272406 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 18272347
Query: 672 tggcg 676
|||||
Sbjct: 18272346 tggcg 18272342
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 222 bits (112), Expect = 3e-055
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 335 ggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttca 394
||||| || ||||| |||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 18432229 ggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaatgttccatcttca 18432170
Query: 395 gtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaac 454
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 18432169 gtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgctgttaac 18432110
Query: 455 actgggaccatgtttactgtctactacaagcctagg 490
|| ||||||||||| |||||||||||||||||||||
Sbjct: 18432109 acagggaccatgttcactgtctactacaagcctagg 18432074
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 18433038 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 18432979
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 18432978 atggcgctttcgtcacatattcagaggt 18432951
Score = 119 bits (60), Expect = 3e-024
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 498 tccagctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccc 557
|||||| |||||||| || || | ||||||||||||||||||||||||| ||||||| |
Sbjct: 18431891 tccagccgagtttgtggtcccttacgatcgctatatggaatcactgaaacaaaattactc 18431832
Query: 558 tatagggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggt 612
|| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 18431831 cattgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 18431776
Score = 115 bits (58), Expect = 5e-023
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 18432420 aggtcaaccacgaagacaccttttgcagagtggctggagtgtgtttgttagtgccaaacg 18432361
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||| |||||||| ||||||||
Sbjct: 18432360 gcttgttgctggggatgcctttatctttct 18432331
Score = 109 bits (55), Expect = 3e-021
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 685 aggtgaggtgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaa 744
||||||| |||||||||||||| ||||| || || |||||||| ||||||||||||||||
Sbjct: 18431536 aggtgagatgggatgaagcttcttccatacctcgccctgaaagagtttctccctggcaaa 18431477
Query: 745 tagaacctgcagtcagccctccccctatcaacccgcttccagt 787
|||||||||| || |||||||| ||| ||||||| || |||||
Sbjct: 18431476 tagaacctgctgtaagccctcctcctgtcaacccactaccagt 18431434
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 18433260 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 18433201
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 18433200 ggcttctcggtgctgcgacgcca 18433178
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 612 ttcactgggaccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaa 671
||||||||||| ||||| |||| | |||| |||||| |||||| ||| ||||||| |||
Sbjct: 18431686 ttcactgggactattgtcggaatgggggattctgatccagctggctggcctgaatcaaaa 18431627
Query: 672 tggcg 676
|||||
Sbjct: 18431626 tggcg 18431622
>gb|C97649.1|C97649 C97649 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60925_1A, mRNA sequence
Length = 387
Score = 216 bits (109), Expect = 2e-053
Identities = 214/248 (86%), Gaps = 1/248 (0%)
Strand = Plus / Plus
Query: 541 ctgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtgaagaggct 599
||||||| ||||||| | || |||||||||||||| ||||||||| ||||||||||||||
Sbjct: 1 ctgaaacaaaattactccattgggatgagatttaagatgaggtttgaaggtgaagaggct 60
Query: 600 ccagaacaaaggttcactgggaccattgttggaaatgtggatcctgatcaagctggatgg 659
||||| ||||| ||||||||||| ||||| |||| | |||| || ||| |||||| |||
Sbjct: 61 ccagagcaaagattcactgggactattgtcggaatgggggattctnatccagctggctgg 120
Query: 660 gctgaatctaaatggcgttacctcaaggtgaggtgggatgaagcttcctccattccacgt 719
||||||| |||||||| | ||| |||||||| |||||||||||||| ||||| || ||
Sbjct: 121 cctgaatcaaaatggcgctcccttaaggtgagatgggatgaagcttcttccatacctcgc 180
Query: 720 cctgaaagggtttctccctggcaaatagaacctgcagtcagccctccccctatcaacccg 779
|||||||| |||||||||||||||||||||||||| || |||||||| ||| |||||||
Sbjct: 181 cctgaaagagtttctccctggcaaatagaacctgctgtaagccctcctcctgtcaaccca 240
Query: 780 cttccagt 787
|| |||||
Sbjct: 241 ctaccagt 248
>gb|C25840.1|C25840 C25840 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C10833_1A, mRNA sequence
Length = 380
Score = 194 bits (98), Expect = 7e-047
Identities = 312/381 (81%), Gaps = 3/381 (0%)
Strand = Plus / Plus
Query: 323 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 382
|||||||| | |||||| || || || ||||| ||||||| ||||| || ||||| |||
Sbjct: 2 agaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaat 61
Query: 383 gttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 442
|||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 62 attccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatgg 121
Query: 443 catgctgttaacactgggaccatgtttactgtctactacaagcctaggacaagtctccag 502
||||| || |||||||| |||||||| ||||| ||||||||||| ||||| || ||||
Sbjct: 122 catgcagtgaacactggaaccatgttcactgtgtactacaagccaaggactag--tccat 179
Query: 503 ctgagtttgttgttccctgtgatcgctatatggaatcactgaaacgaaattaccctatag 562
|||| ||||| || || |||||| || | |||||| |||||||||||| | | ||||
Sbjct: 180 ctgaatttgtggtaccacgtgatctgtacaaggaatctctgaaacgaaatcattcaatag 239
Query: 563 ggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactggga 621
|||||||||| || |||| ||| |||| ||||||||| |||| ||||| |||||||| |
Sbjct: 240 ggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaagattcactggca 299
Query: 622 ccattgttggaaatgtggatcctgatcaagctggatgggctgaatctaaatggcgttacc 681
| ||||||||| | ||| |||| | | |||| |||||||| || |||||||||| ||
Sbjct: 300 caattgttggagtaggtgattctgacccatctggttgggctgactcaaaatggcgttccc 359
Query: 682 tcaaggtgaggtgggatgaag 702
| |||||| | ||||||||||
Sbjct: 360 ttaaggtgcgatgggatgaag 380
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 162200
Score = 143 bits (72), Expect = 2e-031
Identities = 141/164 (85%)
Strand = Plus / Minus
Query: 323 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 382
|||||||| | |||||| || || || ||||| ||||||| ||||| || ||||| |||
Sbjct: 108343 agaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaat 108284
Query: 383 gttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 442
|||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 108283 attccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatgg 108224
Query: 443 catgctgttaacactgggaccatgtttactgtctactacaagcc 486
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 108223 catgcagtgaacactggaaccatgttcactgtgtactacaagcc 108180
Score = 91.7 bits (46), Expect = 8e-016
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
|||||| |||||||| || ||| | |||||||| |||||||||||||| |||||||| ||
Sbjct: 108524 aggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacg 108465
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||||||||||||||| |||||
Sbjct: 108464 ccttgttgctggagatgccttcatatttct 108435
Score = 83.8 bits (42), Expect = 2e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 693 tgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacct 752
|||||||||||| | || |||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 107582 tgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacct 107523
Query: 753 gcagtcagccctccccctatcaacccgcttccag 786
|| ||||||| ||||| ||||||| |||||||
Sbjct: 107522 gctaacagcccttcccctgtcaaccctcttccag 107489
Score = 63.9 bits (32), Expect = 2e-007
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 109282 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 109223
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactgg 149
|||||||| || || || |||||||| || || |||||||
Sbjct: 109222 gtgctgcgccggcacgcggatgagtgcctcccaccactgg 109183
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 167 ccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacata 226
|||||||||||||| || |||||||| || ||||| || || |||||||| || |||||
Sbjct: 109046 ccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatc 108987
Query: 227 ttcagaggt 235
||| |||||
Sbjct: 108986 ttccgaggt 108978
Score = 48.1 bits (24), Expect = 0.010
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 534 ggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtga 592
|||||| |||||||||||| | | |||||||||||||| || |||| ||| |||| ||
Sbjct: 107928 ggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcga 107869
Query: 593 agaggctccagaacaaaggt 612
||||||| |||| |||||||
Sbjct: 107868 agaggctgcagagcaaaggt 107849
>gb|AACV01024881.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg024881, whole
genome shotgun sequence
Length = 52068
Score = 143 bits (72), Expect = 2e-031
Identities = 141/164 (85%)
Strand = Plus / Minus
Query: 323 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 382
|||||||| | |||||| || || || ||||| ||||||| ||||| || ||||| |||
Sbjct: 50848 agaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaat 50789
Query: 383 gttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 442
|||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 50788 attccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatgg 50729
Query: 443 catgctgttaacactgggaccatgtttactgtctactacaagcc 486
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 50728 catgcagtgaacactggaaccatgttcactgtgtactacaagcc 50685
Score = 91.7 bits (46), Expect = 8e-016
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
|||||| |||||||| || ||| | |||||||| |||||||||||||| |||||||| ||
Sbjct: 51029 aggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacg 50970
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||||||||||||||| |||||
Sbjct: 50969 ccttgttgctggagatgccttcatatttct 50940
Score = 83.8 bits (42), Expect = 2e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 693 tgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacct 752
|||||||||||| | || |||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 50087 tgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacct 50028
Query: 753 gcagtcagccctccccctatcaacccgcttccag 786
|| ||||||| ||||| ||||||| |||||||
Sbjct: 50027 gctaacagcccttcccctgtcaaccctcttccag 49994
Score = 63.9 bits (32), Expect = 2e-007
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 51787 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 51728
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactgg 149
|||||||| || || || |||||||| || || |||||||
Sbjct: 51727 gtgctgcgccggcacgcggatgagtgcctcccaccactgg 51688
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 167 ccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacata 226
|||||||||||||| || |||||||| || ||||| || || |||||||| || |||||
Sbjct: 51551 ccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatc 51492
Query: 227 ttcagaggt 235
||| |||||
Sbjct: 51491 ttccgaggt 51483
Score = 48.1 bits (24), Expect = 0.010
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 534 ggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtga 592
|||||| |||||||||||| | | |||||||||||||| || |||| ||| |||| ||
Sbjct: 50433 ggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcga 50374
Query: 593 agaggctccagaacaaaggt 612
||||||| |||| |||||||
Sbjct: 50373 agaggctgcagagcaaaggt 50354
>gb|CH401280.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000117
genomic scaffold, whole genome shotgun sequence
Length = 1521144
Score = 143 bits (72), Expect = 2e-031
Identities = 141/164 (85%)
Strand = Plus / Minus
Query: 323 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 382
|||||||| | |||||| || || || ||||| ||||||| ||||| || ||||| |||
Sbjct: 464250 agaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaat 464191
Query: 383 gttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 442
|||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 464190 attccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatgg 464131
Query: 443 catgctgttaacactgggaccatgtttactgtctactacaagcc 486
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 464130 catgcagtgaacactggaaccatgttcactgtgtactacaagcc 464087
Score = 91.7 bits (46), Expect = 8e-016
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
|||||| |||||||| || ||| | |||||||| |||||||||||||| |||||||| ||
Sbjct: 464431 aggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacg 464372
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||||||||||||||| |||||
Sbjct: 464371 ccttgttgctggagatgccttcatatttct 464342
Score = 83.8 bits (42), Expect = 2e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 693 tgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacct 752
|||||||||||| | || |||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 463489 tgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacct 463430
Query: 753 gcagtcagccctccccctatcaacccgcttccag 786
|| ||||||| ||||| ||||||| |||||||
Sbjct: 463429 gctaacagcccttcccctgtcaaccctcttccag 463396
Score = 63.9 bits (32), Expect = 2e-007
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 465189 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 465130
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactgg 149
|||||||| || || || |||||||| || || |||||||
Sbjct: 465129 gtgctgcgccggcacgcggatgagtgcctcccaccactgg 465090
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 167 ccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacata 226
|||||||||||||| || |||||||| || ||||| || || |||||||| || |||||
Sbjct: 464953 ccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatc 464894
Query: 227 ttcagaggt 235
||| |||||
Sbjct: 464893 ttccgaggt 464885
Score = 48.1 bits (24), Expect = 0.010
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 534 ggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtga 592
|||||| |||||||||||| | | |||||||||||||| || |||| ||| |||| ||
Sbjct: 463835 ggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcga 463776
Query: 593 agaggctccagaacaaaggt 612
||||||| |||| |||||||
Sbjct: 463775 agaggctgcagagcaaaggt 463756
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 143 bits (72), Expect = 2e-031
Identities = 141/164 (85%)
Strand = Plus / Minus
Query: 323 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 382
|||||||| | |||||| || || || ||||| ||||||| ||||| || ||||| |||
Sbjct: 14466111 agaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaat 14466052
Query: 383 gttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 442
|||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 14466051 attccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatgg 14465992
Query: 443 catgctgttaacactgggaccatgtttactgtctactacaagcc 486
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 14465991 catgcagtgaacactggaaccatgttcactgtgtactacaagcc 14465948
Score = 91.7 bits (46), Expect = 8e-016
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
|||||| |||||||| || ||| | |||||||| |||||||||||||| |||||||| ||
Sbjct: 14466292 aggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacg 14466233
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||||||||||||||| |||||
Sbjct: 14466232 ccttgttgctggagatgccttcatatttct 14466203
Score = 83.8 bits (42), Expect = 2e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 693 tgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacct 752
|||||||||||| | || |||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 14465350 tgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacct 14465291
Query: 753 gcagtcagccctccccctatcaacccgcttccag 786
|| ||||||| ||||| ||||||| |||||||
Sbjct: 14465290 gctaacagcccttcccctgtcaaccctcttccag 14465257
Score = 63.9 bits (32), Expect = 2e-007
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 14467050 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 14466991
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactgg 149
|||||||| || || || |||||||| || || |||||||
Sbjct: 14466990 gtgctgcgccggcacgcggatgagtgcctcccaccactgg 14466951
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 167 ccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacata 226
|||||||||||||| || |||||||| || ||||| || || |||||||| || |||||
Sbjct: 14466814 ccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatc 14466755
Query: 227 ttcagaggt 235
||| |||||
Sbjct: 14466754 ttccgaggt 14466746
Score = 48.1 bits (24), Expect = 0.010
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 534 ggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtga 592
|||||| |||||||||||| | | |||||||||||||| || |||| ||| |||| ||
Sbjct: 14465696 ggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcga 14465637
Query: 593 agaggctccagaacaaaggt 612
||||||| |||| |||||||
Sbjct: 14465636 agaggctgcagagcaaaggt 14465617
Score = 46.1 bits (23), Expect = 0.041
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 58 cttctgcaagacattgacagcctctgataccagcactcatggtggattctc 108
|||||||||||||||||| || ||| || |||||||||||||| |||||
Sbjct: 22244436 cttctgcaagacattgactgcaagtgacacgagcactcatggtggtttctc 22244386
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 143 bits (72), Expect = 2e-031
Identities = 141/164 (85%)
Strand = Plus / Minus
Query: 323 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 382
|||||||| | |||||| || || || ||||| ||||||| ||||| || ||||| |||
Sbjct: 17616007 agaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaat 17615948
Query: 383 gttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 442
|||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 17615947 attccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatgg 17615888
Query: 443 catgctgttaacactgggaccatgtttactgtctactacaagcc 486
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 17615887 catgcagtgaacactggaaccatgttcactgtgtactacaagcc 17615844
Score = 91.7 bits (46), Expect = 8e-016
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
|||||| |||||||| || ||| | |||||||| |||||||||||||| |||||||| ||
Sbjct: 17616188 aggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacg 17616129
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||||||||||||||| |||||
Sbjct: 17616128 ccttgttgctggagatgccttcatatttct 17616099
Score = 83.8 bits (42), Expect = 2e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 693 tgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacct 752
|||||||||||| | || |||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 17615246 tgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacct 17615187
Query: 753 gcagtcagccctccccctatcaacccgcttccag 786
|| ||||||| ||||| ||||||| |||||||
Sbjct: 17615186 gctaacagcccttcccctgtcaaccctcttccag 17615153
Score = 63.9 bits (32), Expect = 2e-007
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 17616946 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 17616887
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactgg 149
|||||||| || || || |||||||| || || |||||||
Sbjct: 17616886 gtgctgcgccggcacgcggatgagtgcctcccaccactgg 17616847
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 167 ccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacata 226
|||||||||||||| || |||||||| || ||||| || || |||||||| || |||||
Sbjct: 17616710 ccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatc 17616651
Query: 227 ttcagaggt 235
||| |||||
Sbjct: 17616650 ttccgaggt 17616642
Score = 48.1 bits (24), Expect = 0.010
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 534 ggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtga 592
|||||| |||||||||||| | | |||||||||||||| || |||| ||| |||| ||
Sbjct: 17615592 ggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcga 17615533
Query: 593 agaggctccagaacaaaggt 612
||||||| |||| |||||||
Sbjct: 17615532 agaggctgcagagcaaaggt 17615513
Score = 46.1 bits (23), Expect = 0.041
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 58 cttctgcaagacattgacagcctctgataccagcactcatggtggattctc 108
|||||||||||||||||| || ||| || |||||||||||||| |||||
Sbjct: 26039883 cttctgcaagacattgactgcaagtgacacgagcactcatggtggtttctc 26039833
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 143 bits (72), Expect = 2e-031
Identities = 141/164 (85%)
Strand = Plus / Minus
Query: 323 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 382
|||||||| | |||||| || || || ||||| ||||||| ||||| || ||||| |||
Sbjct: 17570378 agaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaat 17570319
Query: 383 gttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 442
|||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 17570318 attccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatgg 17570259
Query: 443 catgctgttaacactgggaccatgtttactgtctactacaagcc 486
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 17570258 catgcagtgaacactggaaccatgttcactgtgtactacaagcc 17570215
Score = 91.7 bits (46), Expect = 8e-016
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcg 291
|||||| |||||||| || ||| | |||||||| |||||||||||||| |||||||| ||
Sbjct: 17570559 aggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacg 17570500
Query: 292 tcttggtgctggagatgccttcatctttct 321
|||| |||||||||||||||||| |||||
Sbjct: 17570499 ccttgttgctggagatgccttcatatttct 17570470
Score = 83.8 bits (42), Expect = 2e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 693 tgggatgaagcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacct 752
|||||||||||| | || |||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 17569617 tgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacct 17569558
Query: 753 gcagtcagccctccccctatcaacccgcttccag 786
|| ||||||| ||||| ||||||| |||||||
Sbjct: 17569557 gctaacagcccttcccctgtcaaccctcttccag 17569524
Score = 63.9 bits (32), Expect = 2e-007
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 50 gtgcactccttctgcaagacattgacagcctctgataccagcactcatggtggattctcg 109
|||||||||||||||||||| | || || || || || ||||| |||||||| ||||||
Sbjct: 17571317 gtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcg 17571258
Query: 110 gtgctgcggcgccatgcagatgagtgtcttccgccactgg 149
|||||||| || || || |||||||| || || |||||||
Sbjct: 17571257 gtgctgcgccggcacgcggatgagtgcctcccaccactgg 17571218
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 167 ccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacata 226
|||||||||||||| || |||||||| || ||||| || || |||||||| || |||||
Sbjct: 17571081 ccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatc 17571022
Query: 227 ttcagaggt 235
||| |||||
Sbjct: 17571021 ttccgaggt 17571013
Score = 48.1 bits (24), Expect = 0.010
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 534 ggaatcactgaaacgaaattaccctatagggatgagatttaaaatgaggttt-aaggtga 592
|||||| |||||||||||| | | |||||||||||||| || |||| ||| |||| ||
Sbjct: 17569963 ggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcga 17569904
Query: 593 agaggctccagaacaaaggt 612
||||||| |||| |||||||
Sbjct: 17569903 agaggctgcagagcaaaggt 17569884
Score = 46.1 bits (23), Expect = 0.041
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 58 cttctgcaagacattgacagcctctgataccagcactcatggtggattctc 108
|||||||||||||||||| || ||| || |||||||||||||| |||||
Sbjct: 25968059 cttctgcaagacattgactgcaagtgacacgagcactcatggtggtttctc 25968009
>gb|AACV01023254.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023254, whole
genome shotgun sequence
Length = 5802
Score = 119 bits (60), Expect = 3e-024
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 148 ggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtgga 207
|||||||| |||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 5539 ggatatgagccgtcagcctccaacacaagagctggtggccaaggatctgcacggtgtgga 5598
Query: 208 atggcgctttcgccacatattcagaggt 235
|||||||||||| |||||||||||||||
Sbjct: 5599 atggcgctttcgtcacatattcagaggt 5626
Score = 85.7 bits (43), Expect = 5e-014
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 41 aggccacgcgtgcactccttctgcaagacattgacagcctctgataccagcactcatggt 100
|||||||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 5317 aggccacgggtgcactcattctgcaagacattgaccgcctcggacacgagcacacatggc 5376
Query: 101 ggattctcggtgctgcggcgcca 123
|| |||||||||||||| |||||
Sbjct: 5377 ggcttctcggtgctgcgacgcca 5399
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
insert sequence
Length = 3151
Score = 91.7 bits (46), Expect = 8e-016
Identities = 342/438 (78%), Gaps = 2/438 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| | || || ||||| |||||||| || || || ||||| || ||
Sbjct: 589 tccttctgcaagacgctcaccgcgtctgacaccagcacgcacggcggcttctctgtactc 648
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || |||||||| || || || ||||||||||||| ||| || || |||||
Sbjct: 649 cgccgccacgctgatgagtgcctccctcccctggatatgacccagtcg-ccacccacaca 707
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||| || |||||||| ||||| | |||| |||||||| || ||||| || | ||
Sbjct: 708 ggagctcgtggccaaggatctgcacagcatggactggcgcttccgtcacatctttcgcgg 767
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | |||||||| |||||||| ||||| ||| |||| | ||
Sbjct: 768 gcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaaggct 827
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| |||||| ||||| ||||| || || ||||| || | ||| || || ||||| || ||
Sbjct: 828 tgttgctggggatgctttcattttcctcagaggagagaatggtgaactccgtgttggtgt 887
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
|| || || |||||||||| | ||||| || |||||||| ||||| ||||| |||||
Sbjct: 888 tagacgagctatgaggcagctgtccaatgtgccttcttcagtcatatctagccaaagcat 947
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| || || || |||||||| |||||||||||| | ||||| || ||||| || ||
Sbjct: 948 gcacctgggagtccttgctactgcatggcatgctatcaacacgaagagtatgttcaccgt 1007
Query: 475 ctactacaagcctaggac 492
||||||||| ||||||||
Sbjct: 1008 ctactacaaacctaggac 1025
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2481
Score = 91.7 bits (46), Expect = 8e-016
Identities = 342/438 (78%), Gaps = 2/438 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| | || || ||||| |||||||| || || || ||||| || ||
Sbjct: 367 tccttctgcaagacgctcaccgcgtctgacaccagcacgcacggcggcttctctgtactc 426
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || |||||||| || || || ||||||||||||| ||| || || |||||
Sbjct: 427 cgccgccacgctgatgagtgcctccctcccctggatatgacccagtcg-ccacccacaca 485
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||| || |||||||| ||||| | |||| |||||||| || ||||| || | ||
Sbjct: 486 ggagctcgtggccaaggatctgcacagcatggactggcgcttccgtcacatctttcgcgg 545
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | |||||||| |||||||| ||||| ||| |||| | ||
Sbjct: 546 gcaaccgaggaggcatctccttcagagtggttggagtgtgtttgtcagttccaaaaggct 605
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| |||||| ||||| ||||| || || ||||| || | ||| || || ||||| || ||
Sbjct: 606 tgttgctggggatgctttcattttcctcagaggagagaatggtgaactccgtgttggtgt 665
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
|| || || |||||||||| | ||||| || |||||||| ||||| ||||| |||||
Sbjct: 666 tagacgagctatgaggcagctgtccaatgtgccttcttcagtcatatctagccaaagcat 725
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| || || || |||||||| |||||||||||| | ||||| || ||||| || ||
Sbjct: 726 gcacctgggagtccttgctactgcatggcatgctatcaacacgaagagtatgttcaccgt 785
Query: 475 ctactacaagcctaggac 492
||||||||| ||||||||
Sbjct: 786 ctactacaaacctaggac 803
>gb|CF305547.1|CF305547 HDA1--01-A10.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--01-A10, mRNA sequence
Length = 533
Score = 83.8 bits (42), Expect = 2e-013
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 702 gcttcctccattccacgtcctgaaagggtttctccctggcaaatagaacctgcagtcagc 761
||||| ||||| || || |||||||| |||||||||||||||||||||||||| || |||
Sbjct: 14 gcttcttccatacctcgccctgaaagagtttctccctggcaaatagaacctgctgtaagc 73
Query: 762 cctccccctatcaacccgcttccagt 787
||||| ||| ||||||| || |||||
Sbjct: 74 cctcctcctgtcaacccactaccagt 99
>gb|CB662485.1|CB662485 OSJNEd06I21.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06I21 5', mRNA sequence
Length = 843
Score = 79.8 bits (40), Expect = 3e-012
Identities = 187/236 (79%)
Strand = Plus / Plus
Query: 257 cagagtggctggagtgtttttgttagtgccaagcgtcttggtgctggagatgccttcatc 316
|||||||| |||||||| ||||| ||| |||| | |||| |||||| ||||| |||||
Sbjct: 79 cagagtggttggagtgtgtttgtcagttccaaaaggcttgttgctggggatgctttcatt 138
Query: 317 tttctaagaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaa 376
|| || ||||| || | ||| || || ||||| || || || || || ||||||||||
Sbjct: 139 ttcctcagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctg 198
Query: 377 gcaaatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctaca 436
| ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||
Sbjct: 199 tccaatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctact 258
Query: 437 gcatggcatgctgttaacactgggaccatgtttactgtctactacaagcctaggac 492
|||||||||||| | ||||| || ||||| || ||||||||||| ||||||||
Sbjct: 259 gcatggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctaggac 314
>gb|CF306192.1|CF306192 HDA1--02-P11.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--02-P11, mRNA sequence
Length = 636
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 720 cctgaaagggtttctccctggcaaatagaacctgcagtcagccctccccctatcaacccg 779
|||||||| |||||||||||||||||||||||||| || |||||||| ||| |||||||
Sbjct: 26 cctgaaagagtttctccctggcaaatagaacctgctgtaagccctcctcctgtcaaccca 85
Query: 780 cttccagt 787
|| |||||
Sbjct: 86 ctaccagt 93
>gb|CF303595.1|CF303595 ABF1--02-L06.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--02-L06, mRNA sequence
Length = 572
Score = 71.9 bits (36), Expect = 7e-010
Identities = 186/236 (78%)
Strand = Plus / Plus
Query: 257 cagagtggctggagtgtttttgttagtgccaagcgtcttggtgctggagatgccttcatc 316
|||||||| |||||||| ||||| ||| |||| | |||| |||||| ||||| |||||
Sbjct: 56 cagagtggttggagtgtgtttgtcagttccaaaaggcttgttgctggggatgctttcatt 115
Query: 317 tttctaagaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaa 376
|| || ||||| || | ||| || || ||||| | || || || || ||||||||||
Sbjct: 116 ttcctcagaggagagaatggtgaactccgtgttgttgttagacgagctatgaggcagctg 175
Query: 377 gcaaatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctaca 436
| ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||
Sbjct: 176 tccaatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctact 235
Query: 437 gcatggcatgctgttaacactgggaccatgtttactgtctactacaagcctaggac 492
|||||||||||| | ||||| || ||||| || ||||||||||| ||||||||
Sbjct: 236 gcatggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctaggac 291
>gb|CB636812.1|CB636812 OSJNEa02L16.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02L16 5', mRNA sequence
Length = 597
Score = 65.9 bits (33), Expect = 4e-008
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 24 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 83
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctaggac 492
||||||||| | ||||| || ||||| || ||||||||||| ||||||||
Sbjct: 84 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctaggac 136
>gb|CF323190.1|CF323190 HDN--03-C17.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-C17, mRNA sequence
Length = 561
Score = 65.9 bits (33), Expect = 4e-008
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 18 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 77
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctaggac 492
||||||||| | ||||| || ||||| || ||||||||||| ||||||||
Sbjct: 78 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctaggac 130
>gb|AACV01002980.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002980, whole
genome shotgun sequence
Length = 45351
Score = 61.9 bits (31), Expect = 7e-007
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 14732 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 14673
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctagg 490
||||||||| | ||||| || ||||| || ||||||||||| ||||||
Sbjct: 14672 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 14622
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 61.9 bits (31), Expect = 7e-007
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 40770538 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 40770597
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctagg 490
||||||||| | ||||| || ||||| || ||||||||||| ||||||
Sbjct: 40770598 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 40770648
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 398 atatcaagccacagcatgcatcttggtgttcttgc 432
||||||||||| ||||||||||||||||| |||||
Sbjct: 7545631 atatcaagccaaagcatgcatcttggtgtgcttgc 7545665
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 61.9 bits (31), Expect = 7e-007
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 398832 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 398891
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctagg 490
||||||||| | ||||| || ||||| || ||||||||||| ||||||
Sbjct: 398892 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 398942
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBa0093F16
Length = 160925
Score = 61.9 bits (31), Expect = 7e-007
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 131846 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 131905
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctagg 490
||||||||| | ||||| || ||||| || ||||||||||| ||||||
Sbjct: 131906 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 131956
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 61.9 bits (31), Expect = 7e-007
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 14967366 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 14967425
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctagg 490
||||||||| | ||||| || ||||| || ||||||||||| ||||||
Sbjct: 14967426 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 14967476
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 61.9 bits (31), Expect = 7e-007
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 40169087 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 40169146
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctagg 490
||||||||| | ||||| || ||||| || ||||||||||| ||||||
Sbjct: 40169147 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 40169197
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 398 atatcaagccacagcatgcatcttggtgttcttgc 432
||||||||||| ||||||||||||||||| |||||
Sbjct: 7619911 atatcaagccaaagcatgcatcttggtgtgcttgc 7619945
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 61.9 bits (31), Expect = 7e-007
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 380 aatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagca 439
||||| || |||||||| ||||| ||||| |||||||| || || || |||||||| |||
Sbjct: 40689868 aatgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgca 40689927
Query: 440 tggcatgctgttaacactgggaccatgtttactgtctactacaagcctagg 490
||||||||| | ||||| || ||||| || ||||||||||| ||||||
Sbjct: 40689928 tggcatgctatcaacacgaagagtatgttcaccgtctactacaaacctagg 40689978
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 398 atatcaagccacagcatgcatcttggtgttcttgc 432
||||||||||| ||||||||||||||||| |||||
Sbjct: 7547849 atatcaagccaaagcatgcatcttggtgtgcttgc 7547883
>dbj|AK064925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N16, full
insert sequence
Length = 2973
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 398 atatcaagccacagcatgcatcttggtgttcttgctacagc 438
|||||||||||||||||||||||||| || ||||| |||||
Sbjct: 1110 atatcaagccacagcatgcatcttggagtccttgcaacagc 1150
>dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G16, full
insert sequence
Length = 3106
Score = 58.0 bits (29), Expect = 1e-005
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||
Sbjct: 683 tccttctgcaagactttgactgcttcagatacaagcacccatggtggattttcagttctt 742
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgac 156
|| | |||||||| || |||||||| || ||||| |||||
Sbjct: 743 aggaggcatgcagaagaatgtcttcctcccctggacatgac 783
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 386 ccatcttcagtaatatcaagccacagcatgcatcttgg 423
||||| |||||||||||||| || || |||||||||||
Sbjct: 1013 ccatcatcagtaatatcaagtcatagtatgcatcttgg 1050
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,426,105
Number of Sequences: 438736
Number of extensions: 1426105
Number of successful extensions: 7040
Number of sequences better than 0.5: 86
Number of HSP's better than 0.5 without gapping: 91
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6405
Number of HSP's gapped (non-prelim): 575
length of query: 1126
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1105
effective length of database: 2,791,206,460
effective search space: 3084283138300
effective search space used: 3084283138300
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)