BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2649891.2.1
(621 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP005289.2| Oryza sativa (japonica cultivar-group) geno... 139 2e-030
ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA 139 2e-030
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 139 2e-030
dbj|AP005072.3| Oryza sativa (japonica cultivar-group) geno... 139 2e-030
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 139 2e-030
gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) c... 123 1e-025
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 123 1e-025
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 123 1e-025
gb|AACV01010248.1| Oryza sativa (japonica cultivar-group) c... 90 2e-015
ref|XM_473433.1| Oryza sativa (japonica cultivar-group), p... 90 2e-015
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 90 2e-015
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromoso... 90 2e-015
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 90 2e-015
emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OS... 88 7e-015
gb|AACV01007462.1| Oryza sativa (japonica cultivar-group) c... 88 7e-015
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 88 7e-015
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 88 7e-015
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 88 7e-015
dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA... 86 3e-014
gb|AACV01011389.1| Oryza sativa (japonica cultivar-group) c... 86 3e-014
gb|AC119290.2| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 86 3e-014
gb|AU166149.1|AU166149 AU166149 Rice panicle shorter than 3... 72 4e-010
gb|AU029651.1|AU029651 AU029651 Rice panicle shorter than 3... 56 2e-005
gb|CD670812.1|CD670812 OsMR231 5MT resistant rice mutant cD... 56 2e-005
gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (ja... 50 0.001
gb|C27500.1|C27500 C27500 Rice callus cDNA Oryza sativa (ja... 50 0.001
gb|AU163761.1|AU163761 AU163761 Rice panicle at ripening st... 50 0.001
gb|AU184077.1|AU184077 AU184077 Rice root Oryza sativa (jap... 50 0.001
dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 50 0.001
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 50 0.001
gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|NM_197700.1| Oryza sativa (japonica cultivar-group) bet... 50 0.001
ref|NM_197701.1| Oryza sativa (japonica cultivar-group) bet... 50 0.001
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 50 0.001
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|C98131.1|C98131 C98131 Rice callus Oryza sativa (japonic... 46 0.022
gb|AU093543.1|AU093543 AU093543 Rice callus Oryza sativa (j... 46 0.022
gb|AU225903.1|AU225903 AU225903 Oryza sativa Koshihikari pi... 46 0.022
gb|AQ259290.1|AQ259290 nbxb0022M06f CUGI Rice BAC Library O... 44 0.089
gb|AQ865692.1|AQ865692 nbeb0026A21r CUGI Rice BAC Library (... 44 0.089
gb|AQ865772.1|AQ865772 nbeb0026A22r CUGI Rice BAC Library (... 44 0.089
gb|CD670606.1|CD670606 OsMR021 5MT resistant rice mutant cD... 44 0.089
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 44 0.089
dbj|AK059638.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.089
dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.089
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 44 0.089
gb|AACV01010249.1| Oryza sativa (japonica cultivar-group) c... 44 0.089
ref|XM_467145.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.089
ref|XM_473434.1| Oryza sativa (japonica cultivar-group), p... 44 0.089
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 44 0.089
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.089
gb|D22027.1|D22027 RICC10205A Rice callus Oryza sativa (jap... 42 0.35
gb|AU029750.1|AU029750 AU029750 Rice panicle shorter than 3... 42 0.35
gb|AU101525.1|AU101525 AU101525 Rice cDNA from immature lea... 42 0.35
dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.35
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 42 0.35
gb|AACV01001073.1| Oryza sativa (japonica cultivar-group) c... 42 0.35
gb|AACV01002688.1| Oryza sativa (japonica cultivar-group) c... 42 0.35
gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) c... 42 0.35
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 42 0.35
ref|NM_190629.1| Oryza sativa (japonica cultivar-group), p... 42 0.35
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 42 0.35
dbj|AP004072.2| Oryza sativa (japonica cultivar-group) geno... 42 0.35
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 42 0.35
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_F09
Length = 139371
Score = 139 bits (70), Expect = 2e-030
Identities = 153/179 (85%), Gaps = 3/179 (1%)
Strand = Plus / Minus
Query: 217 ctgaagttgacgaccgagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcg 276
|||||||| |||| || ||||||||| |||||||| |||||| ||||||||||||| |
Sbjct: 92629 ctgaagttcacgatggaccggtacgtgccgccgggctgccacccggcggggatgacgttg 92570
Query: 277 ctggcgacgaccgtcctgccggagcccgacgtgaggcggacggagaagggcccctgcag- 335
|||||||||| ||||| ||||||||| ||||||||||||| ||| | ||| |||||||
Sbjct: 92569 ctggcgacgagcgtccggccggagccggacgtgaggcggatggacatcggcgcctgcagc 92510
Query: 336 ggtggcg--ccggagttgnacctccacaccgngccccacgactgctgcatcggcgccca 392
|| | || ||||||||| || ||||||||| |||||||||||||||||||| ||||||
Sbjct: 92509 ggcgccggcccggagttgtacttccacaccgcgccccacgactgctgcatcgccgccca 92451
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 92398 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 92339
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 92338 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 92293
Score = 44.1 bits (22), Expect = 0.089
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 232 gagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtc 291
||||||||||| |||||||| |||| | ||| |||||||||| | | ||||||| | |
Sbjct: 102823 gagcggtacgtcacgccgggcttccagctcgccgggatgacgttgtttgcgacgagcacc 102764
Query: 292 ctgccggagcccgacgtgaggcggacggagaagggcccctgcaggg 337
|||||||| | || |||||||||| ||||| ||| ||| |||||
Sbjct: 102763 ttgccggagtcggaggtgaggcggagcgagaatggcgccttcaggg 102718
>ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 822
Score = 139 bits (70), Expect = 2e-030
Identities = 153/179 (85%), Gaps = 3/179 (1%)
Strand = Plus / Minus
Query: 217 ctgaagttgacgaccgagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcg 276
|||||||| |||| || ||||||||| |||||||| |||||| ||||||||||||| |
Sbjct: 809 ctgaagttcacgatggaccggtacgtgccgccgggctgccacccggcggggatgacgttg 750
Query: 277 ctggcgacgaccgtcctgccggagcccgacgtgaggcggacggagaagggcccctgcag- 335
|||||||||| ||||| ||||||||| ||||||||||||| ||| | ||| |||||||
Sbjct: 749 ctggcgacgagcgtccggccggagccggacgtgaggcggatggacatcggcgcctgcagc 690
Query: 336 ggtggcg--ccggagttgnacctccacaccgngccccacgactgctgcatcggcgccca 392
|| | || ||||||||| || ||||||||| |||||||||||||||||||| ||||||
Sbjct: 689 ggcgccggcccggagttgtacttccacaccgcgccccacgactgctgcatcgccgccca 631
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 578 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 519
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 518 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 473
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 139 bits (70), Expect = 2e-030
Identities = 153/179 (85%), Gaps = 3/179 (1%)
Strand = Plus / Minus
Query: 217 ctgaagttgacgaccgagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcg 276
|||||||| |||| || ||||||||| |||||||| |||||| ||||||||||||| |
Sbjct: 1823467 ctgaagttcacgatggaccggtacgtgccgccgggctgccacccggcggggatgacgttg 1823408
Query: 277 ctggcgacgaccgtcctgccggagcccgacgtgaggcggacggagaagggcccctgcag- 335
|||||||||| ||||| ||||||||| ||||||||||||| ||| | ||| |||||||
Sbjct: 1823407 ctggcgacgagcgtccggccggagccggacgtgaggcggatggacatcggcgcctgcagc 1823348
Query: 336 ggtggcg--ccggagttgnacctccacaccgngccccacgactgctgcatcggcgccca 392
|| | || ||||||||| || ||||||||| |||||||||||||||||||| ||||||
Sbjct: 1823347 ggcgccggcccggagttgtacttccacaccgcgccccacgactgctgcatcgccgccca 1823289
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 1823236 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 1823177
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 1823176 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 1823131
Score = 44.1 bits (22), Expect = 0.089
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 232 gagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtc 291
||||||||||| |||||||| |||| | ||| |||||||||| | | ||||||| | |
Sbjct: 1833661 gagcggtacgtcacgccgggcttccagctcgccgggatgacgttgtttgcgacgagcacc 1833602
Query: 292 ctgccggagcccgacgtgaggcggacggagaagggcccctgcaggg 337
|||||||| | || |||||||||| ||||| ||| ||| |||||
Sbjct: 1833601 ttgccggagtcggaggtgaggcggagcgagaatggcgccttcaggg 1833556
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0708H12
Length = 162381
Score = 139 bits (70), Expect = 2e-030
Identities = 153/179 (85%), Gaps = 3/179 (1%)
Strand = Plus / Minus
Query: 217 ctgaagttgacgaccgagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcg 276
|||||||| |||| || ||||||||| |||||||| |||||| ||||||||||||| |
Sbjct: 20498 ctgaagttcacgatggaccggtacgtgccgccgggctgccacccggcggggatgacgttg 20439
Query: 277 ctggcgacgaccgtcctgccggagcccgacgtgaggcggacggagaagggcccctgcag- 335
|||||||||| ||||| ||||||||| ||||||||||||| ||| | ||| |||||||
Sbjct: 20438 ctggcgacgagcgtccggccggagccggacgtgaggcggatggacatcggcgcctgcagc 20379
Query: 336 ggtggcg--ccggagttgnacctccacaccgngccccacgactgctgcatcggcgccca 392
|| | || ||||||||| || ||||||||| |||||||||||||||||||| ||||||
Sbjct: 20378 ggcgccggcccggagttgtacttccacaccgcgccccacgactgctgcatcgccgccca 20320
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 20267 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 20208
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 20207 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 20162
Score = 44.1 bits (22), Expect = 0.089
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 232 gagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtc 291
||||||||||| |||||||| |||| | ||| |||||||||| | | ||||||| | |
Sbjct: 30692 gagcggtacgtcacgccgggcttccagctcgccgggatgacgttgtttgcgacgagcacc 30633
Query: 292 ctgccggagcccgacgtgaggcggacggagaagggcccctgcaggg 337
|||||||| | || |||||||||| ||||| ||| ||| |||||
Sbjct: 30632 ttgccggagtcggaggtgaggcggagcgagaatggcgccttcaggg 30587
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 139 bits (70), Expect = 2e-030
Identities = 153/179 (85%), Gaps = 3/179 (1%)
Strand = Plus / Minus
Query: 217 ctgaagttgacgaccgagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcg 276
|||||||| |||| || ||||||||| |||||||| |||||| ||||||||||||| |
Sbjct: 26658468 ctgaagttcacgatggaccggtacgtgccgccgggctgccacccggcggggatgacgttg 26658409
Query: 277 ctggcgacgaccgtcctgccggagcccgacgtgaggcggacggagaagggcccctgcag- 335
|||||||||| ||||| ||||||||| ||||||||||||| ||| | ||| |||||||
Sbjct: 26658408 ctggcgacgagcgtccggccggagccggacgtgaggcggatggacatcggcgcctgcagc 26658349
Query: 336 ggtggcg--ccggagttgnacctccacaccgngccccacgactgctgcatcggcgccca 392
|| | || ||||||||| || ||||||||| |||||||||||||||||||| ||||||
Sbjct: 26658348 ggcgccggcccggagttgtacttccacaccgcgccccacgactgctgcatcgccgccca 26658290
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 26658237 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 26658178
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 26658177 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 26658132
Score = 44.1 bits (22), Expect = 0.089
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 232 gagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtc 291
||||||||||| |||||||| |||| | ||| |||||||||| | | ||||||| | |
Sbjct: 26668662 gagcggtacgtcacgccgggcttccagctcgccgggatgacgttgtttgcgacgagcacc 26668603
Query: 292 ctgccggagcccgacgtgaggcggacggagaagggcccctgcaggg 337
|||||||| | || |||||||||| ||||| ||| ||| |||||
Sbjct: 26668602 ttgccggagtcggaggtgaggcggagcgagaatggcgccttcaggg 26668557
>gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005076, whole
genome shotgun sequence
Length = 21571
Score = 123 bits (62), Expect = 1e-025
Identities = 130/151 (86%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 245 cgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccg 304
|||||||| |||||| ||||||||||||| ||||||||||| ||||| ||||||||| |
Sbjct: 2299 cgccgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccggagccgg 2240
Query: 305 acgtgaggcggacggagaagggcccctgcag-ggtggcg--ccggagttgnacctccaca 361
|||||||||||| ||| | ||| ||||||| || | || ||||||||| || ||||||
Sbjct: 2239 acgtgaggcggatggacatcggcgcctgcagcggcgccggcccggagttgtacttccaca 2180
Query: 362 ccgngccccacgactgctgcatcggcgccca 392
||| |||||||||||||||||||| ||||||
Sbjct: 2179 ccgcgccccacgactgctgcatcgccgccca 2149
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 2096 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 2037
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 2036 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 1991
Score = 44.1 bits (22), Expect = 0.089
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 232 gagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtc 291
||||||||||| |||||||| |||| | ||| |||||||||| | | ||||||| | |
Sbjct: 12522 gagcggtacgtcacgccgggcttccagctcgccgggatgacgttgtttgcgacgagcacc 12463
Query: 292 ctgccggagcccgacgtgaggcggacggagaagggcccctgcaggg 337
|||||||| | || |||||||||| ||||| ||| ||| |||||
Sbjct: 12462 ttgccggagtcggaggtgaggcggagcgagaatggcgccttcaggg 12417
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 123 bits (62), Expect = 1e-025
Identities = 130/151 (86%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 245 cgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccg 304
|||||||| |||||| ||||||||||||| ||||||||||| ||||| ||||||||| |
Sbjct: 13112659 cgccgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccggagccgg 13112600
Query: 305 acgtgaggcggacggagaagggcccctgcag-ggtggcg--ccggagttgnacctccaca 361
|||||||||||| ||| | ||| ||||||| || | || ||||||||| || ||||||
Sbjct: 13112599 acgtgaggcggatggacatcggcgcctgcagcggcgccggcccggagttgtacttccaca 13112540
Query: 362 ccgngccccacgactgctgcatcggcgccca 392
||| |||||||||||||||||||| ||||||
Sbjct: 13112539 ccgcgccccacgactgctgcatcgccgccca 13112509
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 13112456 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 13112397
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 13112396 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 13112351
Score = 44.1 bits (22), Expect = 0.089
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 232 gagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtc 291
||||||||||| |||||||| |||| | ||| |||||||||| | | ||||||| | |
Sbjct: 13122882 gagcggtacgtcacgccgggcttccagctcgccgggatgacgttgtttgcgacgagcacc 13122823
Query: 292 ctgccggagcccgacgtgaggcggacggagaagggcccctgcaggg 337
|||||||| | || |||||||||| ||||| ||| ||| |||||
Sbjct: 13122822 ttgccggagtcggaggtgaggcggagcgagaatggcgccttcaggg 13122777
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 123 bits (62), Expect = 1e-025
Identities = 130/151 (86%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 245 cgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccg 304
|||||||| |||||| ||||||||||||| ||||||||||| ||||| ||||||||| |
Sbjct: 26565723 cgccgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccggagccgg 26565664
Query: 305 acgtgaggcggacggagaagggcccctgcag-ggtggcg--ccggagttgnacctccaca 361
|||||||||||| ||| | ||| ||||||| || | || ||||||||| || ||||||
Sbjct: 26565663 acgtgaggcggatggacatcggcgcctgcagcggcgccggcccggagttgtacttccaca 26565604
Query: 362 ccgngccccacgactgctgcatcggcgccca 392
||| |||||||||||||||||||| ||||||
Sbjct: 26565603 ccgcgccccacgactgctgcatcgccgccca 26565573
Score = 75.8 bits (38), Expect = 3e-011
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||||||| ||||| |||||||||||| || | ||||| | ||| |||||||||
Sbjct: 26565520 tcgccgtcgccgtcctcgtcctcgaccagcacggcgaggtagtactggttggagccggcg 26565461
Query: 505 tccaccttgaacgcgatgtccatcccgttccagctgcacggcaccc 550
|||||| |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 26565460 tccacccggaacgcgatgtccaccccctgccatttgcacggcaccc 26565415
Score = 44.1 bits (22), Expect = 0.089
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 232 gagcggtacgtggcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtc 291
||||||||||| |||||||| |||| | ||| |||||||||| | | ||||||| | |
Sbjct: 26575946 gagcggtacgtcacgccgggcttccagctcgccgggatgacgttgtttgcgacgagcacc 26575887
Query: 292 ctgccggagcccgacgtgaggcggacggagaagggcccctgcaggg 337
|||||||| | || |||||||||| ||||| ||| ||| |||||
Sbjct: 26575886 ttgccggagtcggaggtgaggcggagcgagaatggcgccttcaggg 26575841
>gb|AACV01010248.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010248, whole
genome shotgun sequence
Length = 37264
Score = 89.7 bits (45), Expect = 2e-015
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 246 gccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccga 305
||||||| ||||||| | |||||||||| ||||||||||| |||| ||||||||| ||
Sbjct: 1057 gccgggcttccacccggaagggatgacgttgctggcgacgagcgtcttgccggagctgga 1116
Query: 306 cgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccgn 365
||||||||||| |||||| ||| ||||||| | | ||||| ||| | |||| || |
Sbjct: 1117 cgtgaggcggatggagaacggcgcctgcagtgccgagccggcgttcagcttccagacggc 1176
Query: 366 gccccacgactgctgcatc 384
|||||||||||||||||||
Sbjct: 1177 gccccacgactgctgcatc 1195
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 1640 agctggtcggcctggccggggttcgccatggc 1671
>ref|XM_473433.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 795
Score = 89.7 bits (45), Expect = 2e-015
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 246 gccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccga 305
||||||| ||||||| | |||||||||| ||||||||||| |||| ||||||||| ||
Sbjct: 765 gccgggcttccacccggaagggatgacgttgctggcgacgagcgtcttgccggagctgga 706
Query: 306 cgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccgn 365
||||||||||| |||||| ||| ||||||| | | ||||| ||| | |||| || |
Sbjct: 705 cgtgaggcggatggagaacggcgcctgcagtgccgagccggcgttcagcttccagacggc 646
Query: 366 gccccacgactgctgcatc 384
|||||||||||||||||||
Sbjct: 645 gccccacgactgctgcatc 627
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 434 agctggtcggcctggccggggttcgccatggc 403
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 89.7 bits (45), Expect = 2e-015
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 246 gccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccga 305
||||||| ||||||| | |||||||||| ||||||||||| |||| ||||||||| ||
Sbjct: 1397085 gccgggcttccacccggaagggatgacgttgctggcgacgagcgtcttgccggagctgga 1397026
Query: 306 cgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccgn 365
||||||||||| |||||| ||| ||||||| | | ||||| ||| | |||| || |
Sbjct: 1397025 cgtgaggcggatggagaacggcgcctgcagtgccgagccggcgttcagcttccagacggc 1396966
Query: 366 gccccacgactgctgcatc 384
|||||||||||||||||||
Sbjct: 1396965 gccccacgactgctgcatc 1396947
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 1396502 agctggtcggcctggccggggttcgccatggc 1396471
Score = 44.1 bits (22), Expect = 0.089
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 255 ccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccgacgtgaggcg 314
|||||| | ||||||||||| | ||||||||| | | ||||||||||||| ||||| ||
Sbjct: 1406694 ccacccggaggggatgacgttgttggcgacgagcaccttgccggagcccgaggtgagccg 1406635
Query: 315 ga 316
||
Sbjct: 1406634 ga 1406633
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 89.7 bits (45), Expect = 2e-015
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 246 gccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccga 305
||||||| ||||||| | |||||||||| ||||||||||| |||| ||||||||| ||
Sbjct: 5434650 gccgggcttccacccggaagggatgacgttgctggcgacgagcgtcttgccggagctgga 5434591
Query: 306 cgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccgn 365
||||||||||| |||||| ||| ||||||| | | ||||| ||| | |||| || |
Sbjct: 5434590 cgtgaggcggatggagaacggcgcctgcagtgccgagccggcgttcagcttccagacggc 5434531
Query: 366 gccccacgactgctgcatc 384
|||||||||||||||||||
Sbjct: 5434530 gccccacgactgctgcatc 5434512
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 5434067 agctggtcggcctggccggggttcgccatggc 5434036
Score = 44.1 bits (22), Expect = 0.089
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 255 ccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccgacgtgaggcg 314
|||||| | ||||||||||| | ||||||||| | | ||||||||||||| ||||| ||
Sbjct: 5456451 ccacccggaggggatgacgttgttggcgacgagcaccttgccggagcccgaggtgagccg 5456392
Query: 315 ga 316
||
Sbjct: 5456391 ga 5456390
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 89.7 bits (45), Expect = 2e-015
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 246 gccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccga 305
||||||| ||||||| | |||||||||| ||||||||||| |||| ||||||||| ||
Sbjct: 24578749 gccgggcttccacccggaagggatgacgttgctggcgacgagcgtcttgccggagctgga 24578690
Query: 306 cgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccgn 365
||||||||||| |||||| ||| ||||||| | | ||||| ||| | |||| || |
Sbjct: 24578689 cgtgaggcggatggagaacggcgcctgcagtgccgagccggcgttcagcttccagacggc 24578630
Query: 366 gccccacgactgctgcatc 384
|||||||||||||||||||
Sbjct: 24578629 gccccacgactgctgcatc 24578611
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 24578166 agctggtcggcctggccggggttcgccatggc 24578135
Score = 44.1 bits (22), Expect = 0.089
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 255 ccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccgacgtgaggcg 314
|||||| | ||||||||||| | ||||||||| | | ||||||||||||| ||||| ||
Sbjct: 24600550 ccacccggaggggatgacgttgttggcgacgagcaccttgccggagcccgaggtgagccg 24600491
Query: 315 ga 316
||
Sbjct: 24600490 ga 24600489
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
complete sequence
Length = 173522
Score = 89.7 bits (45), Expect = 2e-015
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 246 gccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccga 305
||||||| ||||||| | |||||||||| ||||||||||| |||| ||||||||| ||
Sbjct: 51064 gccgggcttccacccggaagggatgacgttgctggcgacgagcgtcttgccggagctgga 51005
Query: 306 cgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccgn 365
||||||||||| |||||| ||| ||||||| | | ||||| ||| | |||| || |
Sbjct: 51004 cgtgaggcggatggagaacggcgcctgcagtgccgagccggcgttcagcttccagacggc 50945
Query: 366 gccccacgactgctgcatc 384
|||||||||||||||||||
Sbjct: 50944 gccccacgactgctgcatc 50926
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 50481 agctggtcggcctggccggggttcgccatggc 50450
Score = 44.1 bits (22), Expect = 0.089
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 255 ccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccgacgtgaggcg 314
|||||| | ||||||||||| | ||||||||| | | ||||||||||||| ||||| ||
Sbjct: 60673 ccacccggaggggatgacgttgttggcgacgagcaccttgccggagcccgaggtgagccg 60614
Query: 315 ga 316
||
Sbjct: 60613 ga 60612
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 89.7 bits (45), Expect = 2e-015
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 246 gccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccga 305
||||||| ||||||| | |||||||||| ||||||||||| |||| ||||||||| ||
Sbjct: 27620435 gccgggcttccacccggaagggatgacgttgctggcgacgagcgtcttgccggagctgga 27620376
Query: 306 cgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccgn 365
||||||||||| |||||| ||| ||||||| | | ||||| ||| | |||| || |
Sbjct: 27620375 cgtgaggcggatggagaacggcgcctgcagtgccgagccggcgttcagcttccagacggc 27620316
Query: 366 gccccacgactgctgcatc 384
|||||||||||||||||||
Sbjct: 27620315 gccccacgactgctgcatc 27620297
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 27619852 agctggtcggcctggccggggttcgccatggc 27619821
Score = 44.1 bits (22), Expect = 0.089
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 255 ccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagcccgacgtgaggcg 314
|||||| | ||||||||||| | ||||||||| | | ||||||||||||| ||||| ||
Sbjct: 27630044 ccacccggaggggatgacgttgttggcgacgagcaccttgccggagcccgaggtgagccg 27629985
Query: 315 ga 316
||
Sbjct: 27629984 ga 27629983
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from
chromosome 3 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 183327
Score = 87.7 bits (44), Expect = 7e-015
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 305 acgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccg 364
|||| |||||||||||||| || |||||||||| || |||||||||| ||||||||| |
Sbjct: 81326 acgtcaggcggacggagaacgggccctgcagggcggagccggagttgagcctccacactg 81267
Query: 365 ngccccacgactgctgcatcgg 386
|||||| ||||||||||||||
Sbjct: 81266 cgccccatgactgctgcatcgg 81245
>gb|AACV01007462.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007462, whole
genome shotgun sequence
Length = 20053
Score = 87.7 bits (44), Expect = 7e-015
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 305 acgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccg 364
|||| |||||||||||||| || |||||||||| || |||||||||| ||||||||| |
Sbjct: 7110 acgtcaggcggacggagaacgggccctgcagggcggagccggagttgagcctccacactg 7051
Query: 365 ngccccacgactgctgcatcgg 386
|||||| ||||||||||||||
Sbjct: 7050 cgccccatgactgctgcatcgg 7029
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 87.7 bits (44), Expect = 7e-015
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 305 acgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccg 364
|||| |||||||||||||| || |||||||||| || |||||||||| ||||||||| |
Sbjct: 11209825 acgtcaggcggacggagaacgggccctgcagggcggagccggagttgagcctccacactg 11209766
Query: 365 ngccccacgactgctgcatcgg 386
|||||| ||||||||||||||
Sbjct: 11209765 cgccccatgactgctgcatcgg 11209744
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 87.7 bits (44), Expect = 7e-015
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 305 acgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccg 364
|||| |||||||||||||| || |||||||||| || |||||||||| ||||||||| |
Sbjct: 25260532 acgtcaggcggacggagaacgggccctgcagggcggagccggagttgagcctccacactg 25260473
Query: 365 ngccccacgactgctgcatcgg 386
|||||| ||||||||||||||
Sbjct: 25260472 cgccccatgactgctgcatcgg 25260451
Score = 42.1 bits (21), Expect = 0.35
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 307 gtgaggcggacggagaagggcccctgcag 335
|||| ||||| ||||||||||||||||||
Sbjct: 390936 gtgatgcggagggagaagggcccctgcag 390908
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 87.7 bits (44), Expect = 7e-015
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 305 acgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccg 364
|||| |||||||||||||| || |||||||||| || |||||||||| ||||||||| |
Sbjct: 24702637 acgtcaggcggacggagaacgggccctgcagggcggagccggagttgagcctccacactg 24702578
Query: 365 ngccccacgactgctgcatcgg 386
|||||| ||||||||||||||
Sbjct: 24702577 cgccccatgactgctgcatcgg 24702556
Score = 44.1 bits (22), Expect = 0.089
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 448 ccgtcgccggactcgtactcgaccagcaccgcca 481
||||||||| ||||||||| |||||||||||||
Sbjct: 157889 ccgtcgccgttctcgtactccaccagcaccgcca 157922
Score = 42.1 bits (21), Expect = 0.35
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 307 gtgaggcggacggagaagggcccctgcag 335
|||| ||||| ||||||||||||||||||
Sbjct: 169336 gtgatgcggagggagaagggcccctgcag 169308
Score = 42.1 bits (21), Expect = 0.35
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 354 cctccacaccgngccccacgactgctgcatcggcgcccac 393
||||||||||| |||||||||| | ||||||||| ||||
Sbjct: 157801 cctccacaccgacccccacgactcccgcatcggcgtccac 157840
>dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034A12, full
insert sequence
Length = 1250
Score = 85.7 bits (43), Expect = 3e-014
Identities = 119/145 (82%)
Strand = Plus / Minus
Query: 244 gcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagccc 303
||||||||| |||| || | |||||||||| ||||||||||| |||| |||||||||
Sbjct: 866 gcgccgggcttccagccggaagggatgacgttgctggcgacgagcgtcttgccggagctg 807
Query: 304 gacgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacacc 363
||||||||||||| ||||| ||| ||||||| | ||||||| | | | |||| ||
Sbjct: 806 gacgtgaggcggatggagagcggcgcctgcagcgccgcgccggcgctcagcttccagacg 747
Query: 364 gngccccacgactgctgcatcggcg 388
| |||||||||||||||||||||||
Sbjct: 746 gcgccccacgactgctgcatcggcg 722
Score = 58.0 bits (29), Expect = 6e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||| ||| |||||||| ||| |||||||| |||||| | | |||||||||||||
Sbjct: 674 tcgccgtccccgttctcgtacttgacgagcaccgcgaagtagctggggttcgagccggcg 615
Query: 505 tccac 509
|||||
Sbjct: 614 tccac 610
Score = 58.0 bits (29), Expect = 6e-006
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 534 ccagctgcacggcacccgggngtactggatcctgaggcgtccggcgctgcggagctggtc 593
|||| |||||||||||||| ||||||||| |||| |||||| ||| ||||||||
Sbjct: 585 ccagttgcacggcacccggttgtactggatttggaggacgccggcggcgcgcagctggtc 526
Query: 594 ggcctggccgggcttcgccatggc 617
||||||||| || |||||||||||
Sbjct: 525 ggcctggccaggattcgccatggc 502
>gb|AACV01011389.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011389, whole
genome shotgun sequence
Length = 22266
Score = 85.7 bits (43), Expect = 3e-014
Identities = 119/145 (82%)
Strand = Plus / Plus
Query: 244 gcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagccc 303
||||||||| |||| || | |||||||||| ||||||||||| |||| |||||||||
Sbjct: 3684 gcgccgggcttccagccggaagggatgacgttgctggcgacgagcgtcttgccggagctg 3743
Query: 304 gacgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacacc 363
||||||||||||| ||||| ||| ||||||| | ||||||| | | | |||| ||
Sbjct: 3744 gacgtgaggcggatggagagcggcgcctgcagcgccgcgccggcgctcagcttccagacg 3803
Query: 364 gngccccacgactgctgcatcggcg 388
| |||||||||||||||||||||||
Sbjct: 3804 gcgccccacgactgctgcatcggcg 3828
Score = 58.0 bits (29), Expect = 6e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||| ||| |||||||| ||| |||||||| |||||| | | |||||||||||||
Sbjct: 3876 tcgccgtccccgttctcgtacttgacgagcaccgcgaagtagctggggttcgagccggcg 3935
Query: 505 tccac 509
|||||
Sbjct: 3936 tccac 3940
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
||||||||||||||||| || |||||||||||
Sbjct: 4137 agctggtcggcctggccaggattcgccatggc 4168
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06,
complete sequence
Length = 144457
Score = 85.7 bits (43), Expect = 3e-014
Identities = 119/145 (82%)
Strand = Plus / Plus
Query: 244 gcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagccc 303
||||||||| |||| || | |||||||||| ||||||||||| |||| |||||||||
Sbjct: 102824 gcgccgggcttccagccggaagggatgacgttgctggcgacgagcgtcttgccggagctg 102883
Query: 304 gacgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacacc 363
||||||||||||| ||||| ||| ||||||| | ||||||| | | | |||| ||
Sbjct: 102884 gacgtgaggcggatggagagcggcgcctgcagcgccgcgccggcgctcagcttccagacg 102943
Query: 364 gngccccacgactgctgcatcggcg 388
| |||||||||||||||||||||||
Sbjct: 102944 gcgccccacgactgctgcatcggcg 102968
Score = 58.0 bits (29), Expect = 6e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||| ||| |||||||| ||| |||||||| |||||| | | |||||||||||||
Sbjct: 103016 tcgccgtccccgttctcgtacttgacgagcaccgcgaagtagctggggttcgagccggcg 103075
Query: 505 tccac 509
|||||
Sbjct: 103076 tccac 103080
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
||||||||||||||||| || |||||||||||
Sbjct: 103277 agctggtcggcctggccaggattcgccatggc 103308
>gb|CH401195.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000032 genomic
scaffold, whole genome shotgun sequence
Length = 1766531
Score = 85.7 bits (43), Expect = 3e-014
Identities = 119/145 (82%)
Strand = Plus / Plus
Query: 244 gcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagccc 303
||||||||| |||| || | |||||||||| ||||||||||| |||| |||||||||
Sbjct: 1012659 gcgccgggcttccagccggaagggatgacgttgctggcgacgagcgtcttgccggagctg 1012718
Query: 304 gacgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacacc 363
||||||||||||| ||||| ||| ||||||| | ||||||| | | | |||| ||
Sbjct: 1012719 gacgtgaggcggatggagagcggcgcctgcagcgccgcgccggcgctcagcttccagacg 1012778
Query: 364 gngccccacgactgctgcatcggcg 388
| |||||||||||||||||||||||
Sbjct: 1012779 gcgccccacgactgctgcatcggcg 1012803
Score = 58.0 bits (29), Expect = 6e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||| ||| |||||||| ||| |||||||| |||||| | | |||||||||||||
Sbjct: 1012851 tcgccgtccccgttctcgtacttgacgagcaccgcgaagtagctggggttcgagccggcg 1012910
Query: 505 tccac 509
|||||
Sbjct: 1012911 tccac 1012915
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
||||||||||||||||| || |||||||||||
Sbjct: 1013112 agctggtcggcctggccaggattcgccatggc 1013143
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 85.7 bits (43), Expect = 3e-014
Identities = 119/145 (82%)
Strand = Plus / Plus
Query: 244 gcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagccc 303
||||||||| |||| || | |||||||||| ||||||||||| |||| |||||||||
Sbjct: 9813936 gcgccgggcttccagccggaagggatgacgttgctggcgacgagcgtcttgccggagctg 9813995
Query: 304 gacgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacacc 363
||||||||||||| ||||| ||| ||||||| | ||||||| | | | |||| ||
Sbjct: 9813996 gacgtgaggcggatggagagcggcgcctgcagcgccgcgccggcgctcagcttccagacg 9814055
Query: 364 gngccccacgactgctgcatcggcg 388
| |||||||||||||||||||||||
Sbjct: 9814056 gcgccccacgactgctgcatcggcg 9814080
Score = 58.0 bits (29), Expect = 6e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||| ||| |||||||| ||| |||||||| |||||| | | |||||||||||||
Sbjct: 9814128 tcgccgtccccgttctcgtacttgacgagcaccgcgaagtagctggggttcgagccggcg 9814187
Query: 505 tccac 509
|||||
Sbjct: 9814188 tccac 9814192
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
||||||||||||||||| || |||||||||||
Sbjct: 9814389 agctggtcggcctggccaggattcgccatggc 9814420
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 85.7 bits (43), Expect = 3e-014
Identities = 119/145 (82%)
Strand = Plus / Plus
Query: 244 gcgccgggcgtccaccccgcggggatgacgtcgctggcgacgaccgtcctgccggagccc 303
||||||||| |||| || | |||||||||| ||||||||||| |||| |||||||||
Sbjct: 8770382 gcgccgggcttccagccggaagggatgacgttgctggcgacgagcgtcttgccggagctg 8770441
Query: 304 gacgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacacc 363
||||||||||||| ||||| ||| ||||||| | ||||||| | | | |||| ||
Sbjct: 8770442 gacgtgaggcggatggagagcggcgcctgcagcgccgcgccggcgctcagcttccagacg 8770501
Query: 364 gngccccacgactgctgcatcggcg 388
| |||||||||||||||||||||||
Sbjct: 8770502 gcgccccacgactgctgcatcggcg 8770526
Score = 58.0 bits (29), Expect = 6e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagtagttcgcgttcgagccggcg 504
|||||||| ||| |||||||| ||| |||||||| |||||| | | |||||||||||||
Sbjct: 8770574 tcgccgtccccgttctcgtacttgacgagcaccgcgaagtagctggggttcgagccggcg 8770633
Query: 505 tccac 509
|||||
Sbjct: 8770634 tccac 8770638
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
||||||||||||||||| || |||||||||||
Sbjct: 8770835 agctggtcggcctggccaggattcgccatggc 8770866
>gb|AU166149.1|AU166149 AU166149 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31973, mRNA sequence
Length = 641
Score = 71.9 bits (36), Expect = 4e-010
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 305 acgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccg 364
|||| |||||||||||||| || |||||||||| || || | ||||| ||||||||| |
Sbjct: 252 acgtcaggcggacggagaacgggccctgcagggcggagcggaagttgagcctccacactg 193
Query: 365 ngccccacgactgctgcatcgg 386
|||||| ||||||||||||||
Sbjct: 192 cgccccatgactgctgcatcgg 171
>gb|AU029651.1|AU029651 AU029651 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31190_6Z, mRNA sequence
Length = 673
Score = 56.0 bits (28), Expect = 2e-005
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 305 acgtgaggcggacggagaagggcccctgcagggtggcgccggagttgnacctccacaccg 364
|||| |||||||||||||| || ||||||||| || || ||||||| ||||||||| |
Sbjct: 284 acgtcaggcggacggagaacgggccctgcaggc-ggagc-ggagttgagcctccacactg 227
Query: 365 ngccccacgactgctgcatcgg 386
|||||| ||||||||||||||
Sbjct: 226 cgccccatgactgctgcatcgg 205
>gb|CD670812.1|CD670812 OsMR231 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 323
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 586 agctggtcggcctggccgggcttcgccatggc 617
|||||||||||||||||||| |||||||||||
Sbjct: 95 agctggtcggcctggccggggttcgccatggc 64
>gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51142_1A, mRNA sequence
Length = 462
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 284 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 244
>gb|C27500.1|C27500 C27500 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52059_1A, mRNA sequence
Length = 354
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 105 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 65
>gb|AU163761.1|AU163761 AU163761 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10926, mRNA sequence
Length = 711
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 108 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 68
>gb|AU184077.1|AU184077 AU184077 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0912, mRNA sequence
Length = 450
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 364 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 324
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
insert sequence
Length = 1293
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 742 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 702
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
insert sequence
Length = 1794
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 742 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 702
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full
insert sequence
Length = 1313
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 692 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 652
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
insert sequence
Length = 1475
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 924 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 884
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full
insert sequence
Length = 1883
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 1320 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 1280
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
insert sequence
Length = 1266
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 736 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 696
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full
insert sequence
Length = 1031
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 436 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 396
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full
insert sequence
Length = 1290
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 743 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 703
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
sequence
Length = 147117
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 16532 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 16492
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 4285 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 4325
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence,
complete sequence
Length = 135510
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 5088 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 5048
>gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022091, whole
genome shotgun sequence
Length = 36005
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 4382 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 4342
>gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022092, whole
genome shotgun sequence
Length = 10831
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 7533 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 7493
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3
(OSJNBb0014I11.1), mRNA
Length = 904
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 681 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 641
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4
(OSJNBa0010C11.2), mRNA
Length = 1340
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 730 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 690
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 3263713 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 3263673
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 3251465 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 3251505
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 9316588 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 9316548
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 9304624 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 9304664
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 20182382 tcgccgtcgccgtcctcgtactccaccagcaccgcgaagta 20182342
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 445 tcgccgtcgccggactcgtactcgaccagcaccgccaagta 485
|||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 20170418 tcgccgtcgccgtcctcgtactcaaccagcaccgcgaagta 20170458
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,446,438
Number of Sequences: 438736
Number of extensions: 1446438
Number of successful extensions: 41032
Number of sequences better than 0.5: 86
Number of HSP's better than 0.5 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38898
Number of HSP's gapped (non-prelim): 2132
length of query: 621
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 600
effective length of database: 2,791,206,460
effective search space: 1674723876000
effective search space used: 1674723876000
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)