BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643622.2.1
(1067 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AACV01021073.1| Oryza sativa (japonica cultivar-group) c... 634 e-179
ref|NT_080061.1| Oryza sativa (japonica cultivar-group) chr... 634 e-179
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 634 e-179
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 634 e-179
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 634 e-179
gb|AC093612.18| Oryza sativa (japonica cultivar-group) chro... 634 e-179
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 634 e-179
gb|AACV01021070.1| Oryza sativa (japonica cultivar-group) c... 470 e-130
dbj|AK068170.1| Oryza sativa (japonica cultivar-group) cDNA... 462 e-127
dbj|AK099695.1| Oryza sativa (japonica cultivar-group) cDNA... 450 e-124
gb|AC108505.1| Oryza sativa (japonica cultivar-group) chrom... 422 e-115
gb|AC112160.3| Oryza sativa (japonica cultivar-group) chrom... 422 e-115
gb|AACV01012465.1| Oryza sativa (japonica cultivar-group) c... 422 e-115
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 422 e-115
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 422 e-115
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 422 e-115
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 422 e-115
gb|CB653025.1|CB653025 OSJNEc03K11.r OSJNEc Oryza sativa (j... 414 e-113
gb|CB647739.1|CB647739 OSJNEb10M18.r OSJNEb Oryza sativa (j... 410 e-112
ref|NM_195355.1| Oryza sativa (japonica cultivar-group) put... 377 e-102
gb|AU174799.1|AU174799 AU174799 Rice cDNA from leaf Oryza s... 319 2e-084
gb|CB673485.1|CB673485 OSJNEe08A12.f OSJNEe Oryza sativa (j... 315 3e-083
gb|C74921.1|C74921 C74921 Rice cDNA from immature leaf incl... 291 4e-076
gb|CB671869.1|CB671869 OSJNEe05K06.r OSJNEe Oryza sativa (j... 281 4e-073
gb|CB673486.1|CB673486 OSJNEe08A12.r OSJNEe Oryza sativa (j... 266 2e-068
gb|CB685780.1|CB685780 OSJNEf16I01.f OSJNEf Oryza sativa (j... 262 4e-067
ref|NM_195352.1| Oryza sativa (japonica cultivar-group) put... 234 8e-059
gb|CB638654.1|CB638654 OSJNEa07C22.r OSJNEa Oryza sativa (j... 159 4e-036
gb|CB685781.1|CB685781 OSJNEf16I01.r OSJNEf Oryza sativa (j... 90 3e-015
gb|AC099399.2| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|AACV01005822.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 62 7e-007
gb|AC140005.2| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|D47937.1|D47937 RICS13720A Rice green shoot Oryza sativa... 60 3e-006
gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbar... 58 1e-005
gb|AC144427.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AACV01006705.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
dbj|AK119569.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa... 56 4e-005
dbj|AP005570.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AACV01020088.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
ref|NM_184786.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 56 4e-005
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 56 4e-005
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AQ328148.1|AQ328148 nbxb0042D19f CUGI Rice BAC Library O... 54 2e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP003571.4| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01014651.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|CB668321.1|CB668321 OSJNEd16B24.r OSJNEd Oryza sativa (j... 52 6e-004
dbj|AP005308.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP005575.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AACV01014652.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01020124.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01003510.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01007124.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|XM_464380.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 50 0.003
dbj|AP003990.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP004000.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|DU168429.1|DU168429 UCDRdSpm666B_3.1 UCD RdSpm Rice Inse... 48 0.010
gb|AU068590.1|AU068590 AU068590 Rice callus Oryza sativa (j... 48 0.010
gb|AU091996.1|AU091996 AU091996 Rice cDNA from young root O... 48 0.010
gb|AU164836.1|AU164836 AU164836 Rice cDNA from immature lea... 48 0.010
gb|CB644071.1|CB644071 OSJNEb05B21.r OSJNEb Oryza sativa (j... 48 0.010
dbj|AP003870.1| Oryza sativa (japonica cultivar-group) chro... 48 0.010
dbj|AP004653.2| Oryza sativa (japonica cultivar-group) chro... 48 0.010
gb|AF488522.1| Oryza sativa Cyt-P450 monooxygenase (PM-II) ... 48 0.010
dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK102040.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AP005245.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP005254.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP005483.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP005816.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP005419.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|AACV01001813.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01017377.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01018632.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01018826.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01020091.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
ref|XM_482757.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_483266.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 48 0.010
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|CB643546.1|CB643546 OSJNEb04E15.r OSJNEb Oryza sativa (j... 46 0.039
dbj|AK064920.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.039
dbj|AK106843.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.039
dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.039
dbj|AP005467.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
dbj|AP004591.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
gb|AACV01009250.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
gb|AACV01014656.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
gb|AACV01014804.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
gb|AACV01017194.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
gb|AACV01017275.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
gb|AACV01017278.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
ref|XM_479935.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.039
ref|XM_480132.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.039
ref|XM_480133.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.039
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 46 0.039
dbj|AP004797.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
dbj|AP005250.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromoso... 46 0.039
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 46 0.039
gb|AU174798.1|AU174798 AU174798 Rice cDNA from leaf Oryza s... 44 0.15
gb|CB658258.1|CB658258 OSJNEc14C17.r OSJNEc Oryza sativa (j... 44 0.15
dbj|AK100972.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK105745.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC O... 44 0.15
dbj|AB096259.1| Oryza sativa (japonica cultivar-group) PLA1... 44 0.15
gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbar... 44 0.15
gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 ... 44 0.15
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005809.4| Oryza sativa (japonica cultivar-group) geno... 44 0.15
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 44 0.15
gb|AACV01006918.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01008369.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01016741.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01025036.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01025745.1| Oryza sativa (japonica cultivar-group) C... 44 0.15
ref|NM_196400.1| Oryza sativa (japonica cultivar-group) put... 44 0.15
ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chr... 44 0.15
ref|XM_468710.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|XM_470946.1| Oryza sativa (japonica cultivar-group), p... 44 0.15
ref|XM_479078.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 44 0.15
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 44 0.15
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.15
gb|CH401311.1| Oryza sativa (japonica cultivar-group) scaff... 44 0.15
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CH401182.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromoso... 44 0.15
emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromoso... 44 0.15
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
>gb|AACV01021073.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021073, whole
genome shotgun sequence
Length = 18387
Score = 634 bits (320), Expect = e-179
Identities = 605/700 (86%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 5760 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 5701
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 5700 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 5641
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 5640 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 5581
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
||||||||||||||||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 5580 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 5521
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccaca 485
||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 5520 tgatgtcaatgctctcctcgaggaaccgctccggccgctactcgagcgggttgtcccaga 5461
Query: 486 cctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgt 545
| ||||||| || || || ||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 5460 caccggggtcacgtgctacggcccacacgttgacgacgacgctggcgtcctttgggacat 5401
Query: 546 cgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcg 605
|||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 5400 cgtagccggcgatcttgacgctggtgctggccttgtgcgggagcatcagcggcgtcggtg 5341
Query: 606 ggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccg 665
||||||| || | |||||||| ||||| ||||||||||| |||| |||||||| ||| |
Sbjct: 5340 ggtgcagccggaacgactccttcacgacggcctgcaggtagggcaagttcgggatgtctg 5281
Query: 666 tctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcct 725
|||| ||| ||| | ||||||||| |||||||||||||||||| ||| |||| ||
Sbjct: 5280 cctccaacatgacgcgaccgcggccgatgacgcggtccagctcctcttgcgccttcatct 5221
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 5220 gcacccttggattcctcaccagctccgccatcgcccactccaccgttatcaccgtcgtgt 5161
Query: 786 ccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgt 845
|||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 5160 ccgtgccggcggcaatcatatcgcagaggaggccgatgacggtgtcgtcgctgaggtcgt 5101
Query: 846 acttgtccctgagagtgaagagcgcgtcgacgaagtgctg 885
||||||||||||| ||||| || |||||||||||||||||
Sbjct: 5100 acttgtccctgagggtgaacagggcgtcgacgaagtgctg 5061
>ref|NT_080061.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 2697502
Score = 634 bits (320), Expect = e-179
Identities = 605/700 (86%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 2364149 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 2364090
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 2364089 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 2364030
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 2364029 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 2363970
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
||||||||||||||||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 2363969 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 2363910
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccaca 485
||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 2363909 tgatgtcaatgctctcctcgaggaaccgctccggccgctactcgagcgggttgtcccaga 2363850
Query: 486 cctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgt 545
| ||||||| || || || ||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 2363849 caccggggtcacgtgctacggcccacacgttgacgacgacgctggcgtcctttgggacat 2363790
Query: 546 cgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcg 605
|||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 2363789 cgtagccggcgatcttgacgctggtgctggccttgtgcgggagcatcagcggcgtcggtg 2363730
Query: 606 ggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccg 665
||||||| || | |||||||| ||||| ||||||||||| |||| |||||||| ||| |
Sbjct: 2363729 ggtgcagccggaacgactccttcacgacggcctgcaggtagggcaagttcgggatgtctg 2363670
Query: 666 tctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcct 725
|||| ||| ||| | ||||||||| |||||||||||||||||| ||| |||| ||
Sbjct: 2363669 cctccaacatgacgcgaccgcggccgatgacgcggtccagctcctcttgcgccttcatct 2363610
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 2363609 gcacccttggattcctcaccagctccgccatcgcccactccaccgttatcaccgtcgtgt 2363550
Query: 786 ccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgt 845
|||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 2363549 ccgtgccggcggcaatcatatcgcagaggaggccgatgacggtgtcgtcgctgaggtcgt 2363490
Query: 846 acttgtccctgagagtgaagagcgcgtcgacgaagtgctg 885
||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2363489 acttgtccctgagggtgaacagggcgtcgacgaagtgctg 2363450
Score = 470 bits (237), Expect = e-130
Identities = 578/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 2349691 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 2349632
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 2349631 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 2349572
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 2349571 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 2349512
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 2349511 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 2349452
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 2349451 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 2349392
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 2349391 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 2349332
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 2349331 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 2349273
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 2349272 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 2349213
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 2349212 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 2349153
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||||||||||||||||| | ||| |||||
Sbjct: 2349152 cttcatctgcacccttggattcctcaccagctccgccatcgcccactccgccgttatcac 2349093
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 2349092 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 2349033
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 2349032 cgctgaggtcgtactggtccctgagggtgaa 2349002
>gb|CH401245.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000082 genomic
scaffold, whole genome shotgun sequence
Length = 3323203
Score = 634 bits (320), Expect = e-179
Identities = 605/700 (86%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 2985118 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 2985059
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 2985058 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 2984999
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 2984998 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 2984939
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
||||||||||||||||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 2984938 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 2984879
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccaca 485
||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 2984878 tgatgtcaatgctctcctcgaggaaccgctccggccgctactcgagcgggttgtcccaga 2984819
Query: 486 cctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgt 545
| ||||||| || || || ||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 2984818 caccggggtcacgtgctacggcccacacgttgacgacgacgctggcgtcctttgggacat 2984759
Query: 546 cgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcg 605
|||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 2984758 cgtagccggcgatcttgacgctggtgctggccttgtgcgggagcatcagcggcgtcggtg 2984699
Query: 606 ggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccg 665
||||||| || | |||||||| ||||| ||||||||||| |||| |||||||| ||| |
Sbjct: 2984698 ggtgcagccggaacgactccttcacgacggcctgcaggtagggcaagttcgggatgtctg 2984639
Query: 666 tctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcct 725
|||| ||| ||| | ||||||||| |||||||||||||||||| ||| |||| ||
Sbjct: 2984638 cctccaacatgacgcgaccgcggccgatgacgcggtccagctcctcttgcgccttcatct 2984579
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 2984578 gcacccttggattcctcaccagctccgccatcgcccactccaccgttatcaccgtcgtgt 2984519
Query: 786 ccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgt 845
|||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 2984518 ccgtgccggcggcaatcatatcgcagaggaggccgatgacggtgtcgtcgctgaggtcgt 2984459
Query: 846 acttgtccctgagagtgaagagcgcgtcgacgaagtgctg 885
||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2984458 acttgtccctgagggtgaacagggcgtcgacgaagtgctg 2984419
Score = 470 bits (237), Expect = e-130
Identities = 578/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 2957729 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 2957670
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 2957669 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 2957610
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 2957609 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 2957550
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 2957549 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 2957490
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 2957489 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 2957430
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 2957429 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 2957370
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 2957369 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 2957311
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 2957310 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 2957251
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 2957250 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 2957191
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||||||||||||||||| | ||| |||||
Sbjct: 2957190 cttcatctgcacccttggattcctcaccagctccgccatcgcccactccgccgttatcac 2957131
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 2957130 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 2957071
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 2957070 cgctgaggtcgtactggtccctgagggtgaa 2957040
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 634 bits (320), Expect = e-179
Identities = 605/700 (86%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 6253569 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 6253510
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 6253509 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 6253450
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 6253449 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 6253390
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
||||||||||||||||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 6253389 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 6253330
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccaca 485
||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 6253329 tgatgtcaatgctctcctcgaggaaccgctccggccgctactcgagcgggttgtcccaga 6253270
Query: 486 cctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgt 545
| ||||||| || || || ||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 6253269 caccggggtcacgtgctacggcccacacgttgacgacgacgctggcgtcctttgggacat 6253210
Query: 546 cgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcg 605
|||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 6253209 cgtagccggcgatcttgacgctggtgctggccttgtgcgggagcatcagcggcgtcggtg 6253150
Query: 606 ggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccg 665
||||||| || | |||||||| ||||| ||||||||||| |||| |||||||| ||| |
Sbjct: 6253149 ggtgcagccggaacgactccttcacgacggcctgcaggtagggcaagttcgggatgtctg 6253090
Query: 666 tctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcct 725
|||| ||| ||| | ||||||||| |||||||||||||||||| ||| |||| ||
Sbjct: 6253089 cctccaacatgacgcgaccgcggccgatgacgcggtccagctcctcttgcgccttcatct 6253030
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 6253029 gcacccttggattcctcaccagctccgccatcgcccactccaccgttatcaccgtcgtgt 6252970
Query: 786 ccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgt 845
|||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 6252969 ccgtgccggcggcaatcatatcgcagaggaggccgatgacggtgtcgtcgctgaggtcgt 6252910
Query: 846 acttgtccctgagagtgaagagcgcgtcgacgaagtgctg 885
||||||||||||| ||||| || |||||||||||||||||
Sbjct: 6252909 acttgtccctgagggtgaacagggcgtcgacgaagtgctg 6252870
Score = 470 bits (237), Expect = e-130
Identities = 578/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 6226180 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 6226121
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 6226120 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 6226061
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 6226060 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 6226001
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 6226000 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 6225941
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 6225940 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 6225881
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 6225880 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 6225821
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 6225820 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 6225762
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 6225761 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 6225702
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 6225701 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 6225642
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||||||||||||||||| | ||| |||||
Sbjct: 6225641 cttcatctgcacccttggattcctcaccagctccgccatcgcccactccgccgttatcac 6225582
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 6225581 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 6225522
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 6225521 cgctgaggtcgtactggtccctgagggtgaa 6225491
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 634 bits (320), Expect = e-179
Identities = 605/700 (86%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 6366522 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 6366463
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 6366462 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 6366403
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 6366402 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 6366343
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
||||||||||||||||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 6366342 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 6366283
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccaca 485
||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 6366282 tgatgtcaatgctctcctcgaggaaccgctccggccgctactcgagcgggttgtcccaga 6366223
Query: 486 cctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgt 545
| ||||||| || || || ||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 6366222 caccggggtcacgtgctacggcccacacgttgacgacgacgctggcgtcctttgggacat 6366163
Query: 546 cgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcg 605
|||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 6366162 cgtagccggcgatcttgacgctggtgctggccttgtgcgggagcatcagcggcgtcggtg 6366103
Query: 606 ggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccg 665
||||||| || | |||||||| ||||| ||||||||||| |||| |||||||| ||| |
Sbjct: 6366102 ggtgcagccggaacgactccttcacgacggcctgcaggtagggcaagttcgggatgtctg 6366043
Query: 666 tctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcct 725
|||| ||| ||| | ||||||||| |||||||||||||||||| ||| |||| ||
Sbjct: 6366042 cctccaacatgacgcgaccgcggccgatgacgcggtccagctcctcttgcgccttcatct 6365983
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 6365982 gcacccttggattcctcaccagctccgccatcgcccactccaccgttatcaccgtcgtgt 6365923
Query: 786 ccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgt 845
|||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 6365922 ccgtgccggcggcaatcatatcgcagaggaggccgatgacggtgtcgtcgctgaggtcgt 6365863
Query: 846 acttgtccctgagagtgaagagcgcgtcgacgaagtgctg 885
||||||||||||| ||||| || |||||||||||||||||
Sbjct: 6365862 acttgtccctgagggtgaacagggcgtcgacgaagtgctg 6365823
Score = 470 bits (237), Expect = e-130
Identities = 578/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 6352064 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 6352005
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 6352004 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 6351945
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 6351944 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 6351885
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 6351884 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 6351825
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 6351824 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 6351765
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 6351764 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 6351705
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 6351704 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 6351646
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 6351645 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 6351586
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 6351585 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 6351526
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||||||||||||||||| | ||| |||||
Sbjct: 6351525 cttcatctgcacccttggattcctcaccagctccgccatcgcccactccgccgttatcac 6351466
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 6351465 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 6351406
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 6351405 cgctgaggtcgtactggtccctgagggtgaa 6351375
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 370 gccggggcacacccggcggccggcgccgaacggc 403
||||||||| || ||||| |||||||||||||||
Sbjct: 13143662 gccggggcagacgcggcgcccggcgccgaacggc 13143695
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone
OSJNBa0003P07, complete sequence
Length = 175116
Score = 634 bits (320), Expect = e-179
Identities = 605/700 (86%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 84375 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 84316
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 84315 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 84256
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 84255 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 84196
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
||||||||||||||||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 84195 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 84136
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccaca 485
||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 84135 tgatgtcaatgctctcctcgaggaaccgctccggccgctactcgagcgggttgtcccaga 84076
Query: 486 cctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgt 545
| ||||||| || || || ||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 84075 caccggggtcacgtgctacggcccacacgttgacgacgacgctggcgtcctttgggacat 84016
Query: 546 cgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcg 605
|||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 84015 cgtagccggcgatcttgacgctggtgctggccttgtgcgggagcatcagcggcgtcggtg 83956
Query: 606 ggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccg 665
||||||| || | |||||||| ||||| ||||||||||| |||| |||||||| ||| |
Sbjct: 83955 ggtgcagccggaacgactccttcacgacggcctgcaggtagggcaagttcgggatgtctg 83896
Query: 666 tctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcct 725
|||| ||| ||| | ||||||||| |||||||||||||||||| ||| |||| ||
Sbjct: 83895 cctccaacatgacgcgaccgcggccgatgacgcggtccagctcctcttgcgccttcatct 83836
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 83835 gcacccttggattcctcaccagctccgccatcgcccactccaccgttatcaccgtcgtgt 83776
Query: 786 ccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgt 845
|||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 83775 ccgtgccggcggcaatcatatcgcagaggaggccgatgacggtgtcgtcgctgaggtcgt 83716
Query: 846 acttgtccctgagagtgaagagcgcgtcgacgaagtgctg 885
||||||||||||| ||||| || |||||||||||||||||
Sbjct: 83715 acttgtccctgagggtgaacagggcgtcgacgaagtgctg 83676
Score = 470 bits (237), Expect = e-130
Identities = 578/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 69917 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 69858
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 69857 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 69798
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 69797 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 69738
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 69737 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 69678
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 69677 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 69618
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 69617 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 69558
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 69557 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 69499
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 69498 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 69439
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 69438 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 69379
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||||||||||||||||| | ||| |||||
Sbjct: 69378 cttcatctgcacccttggattcctcaccagctccgccatcgcccactccgccgttatcac 69319
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 69318 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 69259
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 69258 cgctgaggtcgtactggtccctgagggtgaa 69228
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 634 bits (320), Expect = e-179
Identities = 605/700 (86%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 6368108 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 6368049
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 6368048 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 6367989
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 6367988 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 6367929
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
||||||||||||||||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 6367928 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 6367869
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccaca 485
||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 6367868 tgatgtcaatgctctcctcgaggaaccgctccggccgctactcgagcgggttgtcccaga 6367809
Query: 486 cctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgt 545
| ||||||| || || || ||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 6367808 caccggggtcacgtgctacggcccacacgttgacgacgacgctggcgtcctttgggacat 6367749
Query: 546 cgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcg 605
|||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 6367748 cgtagccggcgatcttgacgctggtgctggccttgtgcgggagcatcagcggcgtcggtg 6367689
Query: 606 ggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccg 665
||||||| || | |||||||| ||||| ||||||||||| |||| |||||||| ||| |
Sbjct: 6367688 ggtgcagccggaacgactccttcacgacggcctgcaggtagggcaagttcgggatgtctg 6367629
Query: 666 tctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcct 725
|||| ||| ||| | ||||||||| |||||||||||||||||| ||| |||| ||
Sbjct: 6367628 cctccaacatgacgcgaccgcggccgatgacgcggtccagctcctcttgcgccttcatct 6367569
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||| || ||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 6367568 gcacccttggattcctcaccagctccgccatcgcccactccaccgttatcaccgtcgtgt 6367509
Query: 786 ccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgt 845
|||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 6367508 ccgtgccggcggcaatcatatcgcagaggaggccgatgacggtgtcgtcgctgaggtcgt 6367449
Query: 846 acttgtccctgagagtgaagagcgcgtcgacgaagtgctg 885
||||||||||||| ||||| || |||||||||||||||||
Sbjct: 6367448 acttgtccctgagggtgaacagggcgtcgacgaagtgctg 6367409
Score = 470 bits (237), Expect = e-130
Identities = 578/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 6353650 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 6353591
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 6353590 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 6353531
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 6353530 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 6353471
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 6353470 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 6353411
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 6353410 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 6353351
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 6353350 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 6353291
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 6353290 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 6353232
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 6353231 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 6353172
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 6353171 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 6353112
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||||||||||||||||| | ||| |||||
Sbjct: 6353111 cttcatctgcacccttggattcctcaccagctccgccatcgcccactccgccgttatcac 6353052
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 6353051 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 6352992
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 6352991 cgctgaggtcgtactggtccctgagggtgaa 6352961
Score = 44.1 bits (22), Expect = 0.15
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 370 gccggggcacacccggcggccggcgccgaacggc 403
||||||||| || ||||| |||||||||||||||
Sbjct: 13151002 gccggggcagacgcggcgcccggcgccgaacggc 13151035
>gb|AACV01021070.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021070, whole
genome shotgun sequence
Length = 25885
Score = 470 bits (237), Expect = e-130
Identities = 578/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 16001 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 15942
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 15941 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 15882
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 15881 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 15822
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 15821 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 15762
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 15761 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 15702
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 15701 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 15642
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 15641 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 15583
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 15582 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 15523
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 15522 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 15463
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||||||||||||||||| | ||| |||||
Sbjct: 15462 cttcatctgcacccttggattcctcaccagctccgccatcgcccactccgccgttatcac 15403
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 15402 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 15343
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 15342 cgctgaggtcgtactggtccctgagggtgaa 15312
>dbj|AK068170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132J20, full
insert sequence
Length = 1792
Score = 462 bits (233), Expect = e-127
Identities = 577/691 (83%), Gaps = 13/691 (1%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 1563 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 1504
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 1503 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 1444
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1443 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 1384
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 1383 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 1324
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccggaactcg--------agcgggct 477
||||||||||| ||||| |||||| |||||||||||| ||||| || |||||
Sbjct: 1323 tgatgtcgatgctctcctcgaggaaacgctccggccggtactcgagtggggcagtgggct 1264
Query: 478 gtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccctt 537
|||||| || | ||||||| | || |||||||| ||||||| ||| |||||||||||
Sbjct: 1263 gtcccagacactgaggtcgcgtcctacggcccacacattgacgatgacattggcgccctt 1204
Query: 538 ggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcgg 597
||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 1203 ggggacatcgtagccggcgatcttgacgc-ggcgctggccttgtgtgggagcatcagcgg 1145
Query: 598 cgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|||||| | |||||| || | |||||||| ||||| ||||||| ||| |||| ||||||
Sbjct: 1144 cgtcggtgtgtgcagccggaacgactccttcacgacggcctgcaagtagggcaagttcgg 1085
Query: 658 gaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcag 717
|| ||| | |||| ||| ||| | | ||||||| |||||||||||||||||| ||
Sbjct: 1084 gatgtctgcctccaacatgacgcgaccacggccgatgacgcggtccagctcctcttgtgc 1025
Query: 718 cttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcac 777
|||| ||||||||| || ||||||| |||||| ||||||||||||| | ||| |||||
Sbjct: 1024 cttcatctgcacccttggattcctcaccagctctgccatcgcccactccgccgttatcac 965
Query: 778 cgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg----acggtgtcgt 833
|| |||||||| |||||| | ||||||||||||||||||||| ||| ||||||||||
Sbjct: 964 cgccgtgtccgagccggcagcgatcatgtcccagaggaggccgatgacgtacggtgtcgt 905
Query: 834 cgctgaggtcgtacttgtccctgagagtgaa 864
||||||||||||||| ||||||||| |||||
Sbjct: 904 cgctgaggtcgtactggtccctgagggtgaa 874
>dbj|AK099695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G15, full
insert sequence
Length = 1905
Score = 450 bits (227), Expect = e-124
Identities = 601/723 (83%), Gaps = 2/723 (0%)
Strand = Plus / Minus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 1555 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 1496
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 1495 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 1437
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 1436 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 1377
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 1376 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 1317
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||| | | || | |||||||
Sbjct: 1316 cgctccggcctgtactccagcgggttgctccacaccttgggggccctggcgatcgcccac 1257
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 1256 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 1197
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 1196 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 1137
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 1136 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 1077
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 1076 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 1017
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcccag 811
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||||
Sbjct: 1016 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcccat 957
Query: 812 aggaggcctatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcg 871
|| || || || || |||||||| || ||||| |||| || ||||||||||| || ||
Sbjct: 956 agaagcccaataactgtgtcgtcactaaggtcatactgttctctgagagtgaacagagca 897
Query: 872 tcgacgaagtgctgctgggcgccgcgctgcttgagggccctggcgtgctcctccatgatc 931
|| || |||||||||| ||| || | || |||||||||| | || ||||| || ||||||
Sbjct: 896 tccacaaagtgctgcttggcaccactctccttgagggccttcgcatgctcatctatgatc 837
Query: 932 ttc 934
|||
Sbjct: 836 ttc 834
>gb|AC108505.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ2086_B07,
*** SEQUENCING IN PROGRESS ***, 4 ordered pieces
Length = 79991
Score = 422 bits (213), Expect = e-115
Identities = 503/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Minus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 76275 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 76216
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 76215 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 76157
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 76156 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 76097
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 76096 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 76037
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 76036 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 75977
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 75976 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 75917
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 75916 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 75857
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 75856 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 75797
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 75796 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 75737
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||
Sbjct: 75736 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcc 75680
Score = 48.1 bits (24), Expect = 0.010
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 827 gtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgc 886
|||||||| || ||||| |||| || ||||||||||| || || || || |||||||||
Sbjct: 75084 gtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgctgc 75025
Query: 887 tgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 75024 ttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 74977
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
complete sequence
Length = 121466
Score = 422 bits (213), Expect = e-115
Identities = 503/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Minus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 15842 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 15783
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 15782 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 15724
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 15723 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 15664
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 15663 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 15604
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 15603 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 15544
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 15543 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 15484
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 15483 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 15424
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 15423 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 15364
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 15363 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 15304
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||
Sbjct: 15303 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcc 15247
Score = 48.1 bits (24), Expect = 0.010
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 827 gtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgc 886
|||||||| || ||||| |||| || ||||||||||| || || || || |||||||||
Sbjct: 14651 gtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgctgc 14592
Query: 887 tgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 14591 ttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 14544
>gb|AACV01012465.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012465, whole
genome shotgun sequence
Length = 4314
Score = 422 bits (213), Expect = e-115
Identities = 503/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Plus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 633 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 692
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 693 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 751
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 752 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 811
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 812 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 871
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 872 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 931
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 932 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 991
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 992 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 1051
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 1052 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 1111
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 1112 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 1171
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||
Sbjct: 1172 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcc 1228
Score = 48.1 bits (24), Expect = 0.010
Identities = 87/108 (80%)
Strand = Plus / Plus
Query: 827 gtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgc 886
|||||||| || ||||| |||| || ||||||||||| || || || || |||||||||
Sbjct: 1824 gtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgctgc 1883
Query: 887 tgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 1884 ttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 1931
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 422 bits (213), Expect = e-115
Identities = 503/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Minus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 519555 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 519496
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 519495 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 519437
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 519436 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 519377
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 519376 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 519317
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 519316 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 519257
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 519256 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 519197
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 519196 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 519137
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 519136 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 519077
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 519076 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 519017
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||
Sbjct: 519016 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcc 518960
Score = 48.1 bits (24), Expect = 0.010
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 827 gtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgc 886
|||||||| || ||||| |||| || ||||||||||| || || || || |||||||||
Sbjct: 518364 gtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgctgc 518305
Query: 887 tgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 518304 ttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 518257
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 422 bits (213), Expect = e-115
Identities = 503/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Minus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 6508066 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 6508007
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 6508006 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 6507948
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 6507947 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 6507888
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 6507887 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 6507828
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 6507827 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 6507768
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 6507767 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 6507708
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 6507707 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 6507648
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 6507647 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 6507588
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 6507587 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 6507528
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||
Sbjct: 6507527 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcc 6507471
Score = 48.1 bits (24), Expect = 0.010
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 827 gtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgc 886
|||||||| || ||||| |||| || ||||||||||| || || || || |||||||||
Sbjct: 6506875 gtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgctgc 6506816
Query: 887 tgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 6506815 ttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 6506768
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 422 bits (213), Expect = e-115
Identities = 503/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Minus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 23808379 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 23808320
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 23808319 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 23808261
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 23808260 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 23808201
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 23808200 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 23808141
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 23808140 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 23808081
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 23808080 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 23808021
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 23808020 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 23807961
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 23807960 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 23807901
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 23807900 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 23807841
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||
Sbjct: 23807840 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcc 23807784
Score = 48.1 bits (24), Expect = 0.010
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 827 gtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgc 886
|||||||| || ||||| |||| || ||||||||||| || || || || |||||||||
Sbjct: 23807188 gtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgctgc 23807129
Query: 887 tgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 23807128 ttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 23807081
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 422 bits (213), Expect = e-115
Identities = 503/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Minus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 24129603 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 24129544
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 24129543 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 24129485
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 24129484 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 24129425
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 24129424 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 24129365
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 24129364 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 24129305
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 24129304 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 24129245
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 24129244 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 24129185
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 24129184 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 24129125
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 24129124 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 24129065
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
||||| ||||||| || || ||||| || |||||| | || || ||||||||||||
Sbjct: 24129064 gccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcc 24129008
Score = 48.1 bits (24), Expect = 0.010
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 827 gtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgc 886
|||||||| || ||||| |||| || ||||||||||| || || || || |||||||||
Sbjct: 24128412 gtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgctgc 24128353
Query: 887 tgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 24128352 ttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 24128305
>gb|CB653025.1|CB653025 OSJNEc03K11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc03K11 3', mRNA sequence
Length = 773
Score = 414 bits (209), Expect = e-113
Identities = 469/553 (84%), Gaps = 2/553 (0%)
Strand = Plus / Plus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 220 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 279
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 280 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 338
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 339 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 398
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 399 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 458
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 459 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 518
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 519 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 578
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 579 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 638
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 639 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 698
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 699 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctct 758
Query: 752 gccatcgcccact 764
||||| |||||||
Sbjct: 759 gccattgcccact 771
>gb|CB647739.1|CB647739 OSJNEb10M18.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10M18 3', mRNA sequence
Length = 767
Score = 410 bits (207), Expect = e-112
Identities = 467/551 (84%), Gaps = 2/551 (0%)
Strand = Plus / Plus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 218 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 277
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 278 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 336
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 337 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 396
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 397 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 456
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 457 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 516
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 517 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 576
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 577 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacg 636
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||||||
Sbjct: 637 acggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccg 696
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 697 acgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaacagctct 756
Query: 752 gccatcgccca 762
||||| |||||
Sbjct: 757 gccattgccca 767
>ref|NM_195355.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450
protein (OSJNBa0003P07.3), mRNA
Length = 1211
Score = 377 bits (190), Expect = e-102
Identities = 328/374 (87%)
Strand = Plus / Minus
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||| |
Sbjct: 674 acgttgacgacgacgctggcgtcctttgggacatcgtagccggcgatcttgacgctggtg 615
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacg 631
|||||| |||| |||||||||||||||||||| |||||||| || | |||||||| |||
Sbjct: 614 ctggccttgtgcgggagcatcagcggcgtcggtgggtgcagccggaacgactccttcacg 555
Query: 632 actgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccg 691
|| ||||||||||| |||| |||||||| ||| | |||| ||| ||| | ||||||||
Sbjct: 554 acggcctgcaggtagggcaagttcgggatgtctgcctccaacatgacgcgaccgcggccg 495
Query: 692 acgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctcc 751
| |||||||||||||||||| ||| |||| ||||||||| || ||||||| |||||||
Sbjct: 494 atgacgcggtccagctcctcttgcgccttcatctgcacccttggattcctcaccagctcc 435
Query: 752 gccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcccag 811
||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || |||
Sbjct: 434 gccatcgcccactccaccgttatcaccgtcgtgtccgtgccggcggcaatcatatcgcag 375
Query: 812 aggaggcctatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcg 871
|||||||| |||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 374 aggaggccgatgacggtgtcgtcgctgaggtcgtacttgtccctgagggtgaacagggcg 315
Query: 872 tcgacgaagtgctg 885
||||||||||||||
Sbjct: 314 tcgacgaagtgctg 301
Score = 200 bits (101), Expect = 1e-048
Identities = 200/233 (85%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 907 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 848
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| ||||||||||||||| | |||||| || | || ||| ||||||
Sbjct: 847 tgacgagccctggggactccatcatgtcgaggtcctccggccgtgtgccgtcttgcagcg 788
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 787 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 728
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcg 418
||||||||||||||||||| ||||| |||||||| || || |||||| |||||
Sbjct: 727 gcgcgccggggcacacccgacggccagcgccgaaggggaggacgcggtagtcg 675
>gb|AU174799.1|AU174799 AU174799 Rice cDNA from leaf Oryza sativa (japonica cultivar-group)
cDNA clone F10379, mRNA sequence
Length = 423
Score = 319 bits (161), Expect = 2e-084
Identities = 353/417 (84%)
Strand = Plus / Minus
Query: 448 gaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgc 507
|||||||||||||| | |||| |||||| || |||||||| |||||| | || | |||
Sbjct: 421 gaaccgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgc 362
Query: 508 ccacacgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgct 567
||||||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| |
Sbjct: 361 ccacacgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgtt 302
Query: 568 ggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactcctt 627
| ||||||| |||| ||||||||||||||||||||||||||||| || || ||||||||
Sbjct: 301 cgtgctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactcctt 242
Query: 628 gacgactgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcg 687
|||||| || | ||||||||| ||| || ||||||| |||||||||| ||| | ||||||
Sbjct: 241 gacgacggcgttcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcg 182
Query: 688 gccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcag 747
||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||
Sbjct: 181 gccgacgacgcggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccag 122
Query: 748 ctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtc 807
||| ||||| ||||||| || || ||||| || |||||| | || || |||||||||||
Sbjct: 121 ctctgccattgcccactcgactgatatcactgtggtgtccattccagcagtgatcatgtc 62
Query: 808 ccagaggaggcctatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaa 864
||| || || || || || |||||||| || ||||| |||| || |||||||||||
Sbjct: 61 ccatagaagcccaataactgtgtcgtcactaaggtcatactgttctctgagagtgaa 5
>gb|CB673485.1|CB673485 OSJNEe08A12.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08A12 5', mRNA sequence
Length = 818
Score = 315 bits (159), Expect = 3e-083
Identities = 348/411 (84%)
Strand = Plus / Minus
Query: 524 acgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgg 583
|||||||||||||||||||||| ||| ||| ||||||||||| | | ||||||| ||||
Sbjct: 815 acgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtgctggccttgtgc 756
Query: 584 gggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacgactgcctgcagg 643
||||||||||||||||||||||||||||| || || |||||||||||||| || | ||||
Sbjct: 755 gggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacgacggcgttcagg 696
Query: 644 taaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtcc 703
||||| ||| || ||||||| |||||||||| ||| | ||||||||||||||||||||||
Sbjct: 695 taagggaggctctggaagtcggtctccgacatgacgcggtcgcggccgacgacgcggtcc 636
Query: 704 agctcctcctgcagcttctcctgcaccctggggttcctcagcagctccgccatcgcccac 763
||||||||||||||||||| |||||||||||||||||| | |||||| ||||| ||||||
Sbjct: 635 agctcctcctgcagcttcttctgcaccctggggttcctgaccagctctgccattgcccac 576
Query: 764 tacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatg 823
| || || ||||| || |||||| | || || |||||||||||||| || || || ||
Sbjct: 575 tcgactgatatcactgtggtgtccattccagcagtgatcatgtcccatagaagcccaata 516
Query: 824 acggtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgc 883
|| |||||||| || ||||| |||| || ||||||||||| || || || || ||||||
Sbjct: 515 actgtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaaagtgc 456
Query: 884 tgctgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
|||| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 455 tgcttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 405
>gb|C74921.1|C74921 C74921 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E60901_1A,
mRNA sequence
Length = 366
Score = 291 bits (147), Expect = 4e-076
Identities = 286/333 (85%)
Strand = Plus / Minus
Query: 432 cgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcgg 491
||||||||||| || |||||||||||||| | |||| |||||| || |||||||| ||
Sbjct: 366 cgatgttctcctcgatgaaccgctccggcctgtactccagcgggttgctccacaccttgg 307
Query: 492 ggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagc 551
|||| || | |||||||||||| || | |||||||||||||||||||||| ||| |
Sbjct: 306 ggtccntggcgatcgcccacacgttcaccatcacgttggcgcccttggggatgttgtacc 247
Query: 552 cggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgca 611
|| ||||||||||| | | ||||||| |||| |||||||||||||| |||||||||||||
Sbjct: 246 cgccgatcttgacgttcgtgctggccttgtgcgggagcatcagcggngtcggcgggtgca 187
Query: 612 ggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccgtctccg 671
| || || |||||||||||||| || | ||||||||| ||| || ||||||| |||||||
Sbjct: 186 gccggagcgactccttgacgacggcgttcaggtaagggaggctctggaagtcggtctccg 127
Query: 672 acaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccc 731
||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 126 acatgacgcggtcgcggccgacgacgcggtccagctcctcctgcagcttcttctgcaccc 67
Query: 732 tggggttcctcagcagctccgccatcgcccact 764
|||||||||| | |||||| ||||| |||||||
Sbjct: 66 tggggttcctgaccagctctgccattgcccact 34
>gb|CB671869.1|CB671869 OSJNEe05K06.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05K06 3', mRNA sequence
Length = 891
Score = 281 bits (142), Expect = 4e-073
Identities = 309/363 (85%), Gaps = 5/363 (1%)
Strand = Plus / Plus
Query: 506 gcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacg 565
|||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 98 gcccacacattgacgatgacattggcgcccttggggacatcgtagccggcgatcttgacg 157
Query: 566 ctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactcc 625
| |||||||||| |||| |||||||||||||||||||| | |||||| || | ||||||
Sbjct: 158 c-ggcgctggccttgtgtgggagcatcagcggcgtcggtgtgtgcagccggaacgactcc 216
Query: 626 ttgacgactgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcg 685
|| ||||| ||||||| ||| |||| |||||||| ||| | |||| ||| ||| | |
Sbjct: 217 ttcacgacggcctgcaagtagggcaagttcgggatgtctgcctccaacatgacgcgacca 276
Query: 686 cggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagc 745
||||||| |||||||||||||||||| || |||| ||||||||| || ||||||| |
Sbjct: 277 cggccgatgacgcggtccagctcctcttgtgccttcatctgcacccttggattcctcacc 336
Query: 746 agctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatg 805
||||||||||||||||||| | ||| ||||||| |||||||| |||||| | |||||||
Sbjct: 337 agctccgccatcgcccactccgccgttatcaccgccgtgtccgagccggcagcgatcatg 396
Query: 806 tcccagaggaggcctatg----acggtgtcgtcgctgaggtcgtacttgtccctgagagt 861
|||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct: 397 tcccagaggaggccgatgacgtacggtgtcgtcgctgaggtcgtactggtccctgagggt 456
Query: 862 gaa 864
|||
Sbjct: 457 gaa 459
>gb|CB673486.1|CB673486 OSJNEe08A12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08A12 3', mRNA sequence
Length = 780
Score = 266 bits (134), Expect = 2e-068
Identities = 349/418 (83%), Gaps = 2/418 (0%)
Strand = Plus / Plus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 364 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 423
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 424 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 482
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 483 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 542
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 543 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 602
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccac 511
|||||||||| | |||| |||||| || |||||||| |||||| | || | |||||||
Sbjct: 603 cgctccggcctgtactccagcgggttgctccacaccttggggtccctggcgatcgcccac 662
Query: 512 acgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcg 571
||||| || | |||||||||||||||||||||| ||| ||| ||||||||||| | | |
Sbjct: 663 acgttcaccatcacgttggcgcccttggggatgttgtacccgccgatcttgacgttcgtg 722
Query: 572 ctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttga 629
|||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 723 ctggccttgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttga 780
>gb|CB685780.1|CB685780 OSJNEf16I01.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16I01 5', mRNA sequence
Length = 731
Score = 262 bits (132), Expect = 4e-067
Identities = 300/356 (84%)
Strand = Plus / Minus
Query: 579 tgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacgactgcct 638
|||| ||||||||||||||||||||||||||||| || || |||||||||||||| || |
Sbjct: 731 tgtgcgggagcatcagcggcgtcggcgggtgcagccggagcgactccttgacgacggcgt 672
Query: 639 gcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccgacgacgc 698
||||||||| ||| || ||||||| |||||||||| ||| | |||||||||||||||||
Sbjct: 671 tcaggtaagggaggctctggaagtcggtctccgacatgacgcggtcgcggccgacgacgc 612
Query: 699 ggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctccgccatcg 758
|||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||| |
Sbjct: 611 ggtccagctcctcctgcagcttcttctgcaccctggggttcctgaccagctctgccattg 552
Query: 759 cccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcccagaggaggc 818
|||||| || || ||||| || |||||| | || || |||||||||||||| || || |
Sbjct: 551 cccactcgactgatatcactgtggtgtccattccagcagtgatcatgtcccatagaagcc 492
Query: 819 ctatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacga 878
| || || |||||||| || ||||| |||| || ||||||||||| || || || || |
Sbjct: 491 caataactgtgtcgtcactaaggtcatactgttctctgagagtgaacagagcatccacaa 432
Query: 879 agtgctgctgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttc 934
||||||||| ||| || | || |||||||||| | || ||||| || |||||||||
Sbjct: 431 agtgctgcttggcaccactctccttgagggccttcgcatgctcatctatgatcttc 376
>ref|NM_195352.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450
protein (OSJNBa0003P07.10), mRNA
Length = 1188
Score = 234 bits (118), Expect = 8e-059
Identities = 238/278 (85%)
Strand = Plus / Minus
Query: 186 acagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaagg 245
|||||||||||||||| ||||| ||| |||| || |||||| |||||||||||||||||
Sbjct: 1159 acagctcctccttgtcgaggcgtggcatggcaacaacctgcaacggcgtggccatgaagg 1100
Query: 246 tgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcg 305
|||||||||| | ||||||||||||| | |||||| || || || ||| |||||||
Sbjct: 1099 tgacgagccctgaggactccatcatgtcgaggtcctccggccatgtgccgtctggcagcg 1040
Query: 306 tccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagct 365
||| ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1039 cccatgtgaactggtgcagcaggtggccgatcatggatgccacgaggctgatcccgagct 980
Query: 366 gcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgccct 425
| ||||||||||| ||||| ||||| |||||||| || || |||||| ||||| |||||
Sbjct: 979 gtgcgccggggcaaacccgacggccagcgccgaaggggaggacgcggtagtcgctgccct 920
Query: 426 tgatgtcgatgttctcccggaggaaccgctccggccgg 463
||||||||||| ||||| |||||| ||||||||||||
Sbjct: 919 tgatgtcgatgctctcctcgaggaaacgctccggccgg 882
Score = 117 bits (59), Expect = 1e-023
Identities = 105/119 (88%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 515 ttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcgctg 574
||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 878 ttgacgatgacattggcgcccttggggacatcgtagccggcgatcttgacgc-ggcgctg 820
Query: 575 gccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacgac 633
||| |||| |||||||||||||||||||| | |||||| || | |||||||| |||||
Sbjct: 819 gccttgtgtgggagcatcagcggcgtcggtgtgtgcagccggaacgactccttcacgac 761
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 825 cggtgtcgtcgctgaggtcgtacttgtccctgagagtgaa 864
|||||||||||||||||||||||| ||||||||| |||||
Sbjct: 758 cggtgtcgtcgctgaggtcgtactggtccctgagggtgaa 719
>gb|CB638654.1|CB638654 OSJNEa07C22.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa07C22 3', mRNA sequence
Length = 652
Score = 159 bits (80), Expect = 4e-036
Identities = 235/284 (82%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 357 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 416
Query: 273 tcacgtcctcggggcaggtcccgctc-ggcagcgtccacgtgaagtggtgcagcatgtgg 331
| |||||||| || | ||| || ||| || || | |||| ||| ||||| || | |||
Sbjct: 417 tgacgtcctccggcctggtgcc-ctcggggagagaccactcgaactggtggaggaggtgc 475
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 476 ccgatcatggaggcgacgaggttgatgccgagctgggcgccggggcacacgcggcggccg 535
Query: 392 gcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgatgttctcccggaggaac 451
|||||||| || ||||| | ||||||| |||||||||||||||||||||| || ||||
Sbjct: 536 gcgccgaaggggagcaccctgaagtcgctgcccttgatgtcgatgttctcctcgatgaac 595
Query: 452 cgctccggccggaactcgagcgggctgtcccacacctcggggtc 495
|||||||||| | |||| |||||| || |||||||| ||||||
Sbjct: 596 cgctccggcctgtactccagcgggttgctccacaccttggggtc 639
>gb|CB685781.1|CB685781 OSJNEf16I01.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16I01 3', mRNA sequence
Length = 587
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 332 ccgatcatggacgccacgaggttgatcccgagctgcgcgccggggcacacccggcggccg 391
||||||||||| || || |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 503 ccgatcatggaggcgaccaggttgatgccgagctgggcgccggggcacacgcggcggccg 562
Query: 392 gcgccgaacggcagcac 408
|||||||| || |||||
Sbjct: 563 gcgccgaaggggagcac 579
Score = 44.1 bits (22), Expect = 0.15
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 213 tggcgacggcctgcagcggcgtggccatgaaggtgacgagcccgggggactccatcatgc 272
|||||| | ||||||||| |||| |||||| ||||||| ||| |||||||||||||
Sbjct: 384 tggcgatgacctgcagcgacgtgctcatgaacgtgacgacgccgttggactccatcatgt 443
Query: 273 tcacgtcctc 282
| ||||||||
Sbjct: 444 tgacgtcctc 453
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
complete sequence
Length = 122218
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 74666 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 74612
>gb|AACV01005822.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005822, whole
genome shotgun sequence
Length = 8049
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 3876 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 3822
>ref|NT_079917.2| Oryza sativa (japonica cultivar-group)
Length = 2507935
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 313208 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 313262
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
complete sequence
Length = 138054
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 125607 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 125661
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 1895859 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 1895913
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 2088221 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 2088275
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 14899346 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 14899287
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 14899286 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 14899227
Query: 804 tgtcc 808
|||||
Sbjct: 14899226 tgtcc 14899222
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 452 cgctccggccggaactcgagcgggct-gtcccacacc 487
|||||||||||||||||||||||| | ||||||||||
Sbjct: 20985999 cgctccggccggaactcgagcgggttcgtcccacacc 20986035
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 448 gaaccgctccggccggaactcg 469
||||||||||||||||||||||
Sbjct: 17886857 gaaccgctccggccggaactcg 17886878
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 1900743 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 1900797
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 14220080 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 14220021
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 14220020 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 14219961
Query: 804 tgtcc 808
|||||
Sbjct: 14219960 tgtcc 14219956
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 452 cgctccggccggaactcgagcgggctgtcccacacc 487
|||||||||||||||||||||||| ||||||||||
Sbjct: 20467018 cgctccggccggaactcgagcgggtcgtcccacacc 20467053
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 448 gaaccgctccggccggaactcg 469
||||||||||||||||||||||
Sbjct: 17146659 gaaccgctccggccggaactcg 17146680
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 61.9 bits (31), Expect = 7e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct: 1900745 ggaggaaccgctccggctggaactcgagcggcgcgtcccacacgtcggcgtcgcg 1900799
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 14225105 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 14225046
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 14225045 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 14224986
Query: 804 tgtcc 808
|||||
Sbjct: 14224985 tgtcc 14224981
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 452 cgctccggccggaactcgagcgggctgtcccacacc 487
|||||||||||||||||||||||| ||||||||||
Sbjct: 20473989 cgctccggccggaactcgagcgggtcgtcccacacc 20474024
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 448 gaaccgctccggccggaactcg 469
||||||||||||||||||||||
Sbjct: 17153090 gaaccgctccggccggaactcg 17153111
>gb|D47937.1|D47937 RICS13720A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 290
Score = 60.0 bits (30), Expect = 3e-006
Identities = 111/138 (80%)
Strand = Plus / Minus
Query: 797 gtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgtacttgtccctg 856
|||||||||||||| || || || || || |||||||| || ||||| |||| || |||
Sbjct: 273 gtgatcatgtcccatagaagcccaataactgtgtcgtcactaaggtcatactgttctctg 214
Query: 857 agagtgaagagcgcgtcgacgaagtgctgctgggcgccgcgctgcttgagggccctggcg 916
|||||||| || || || || |||||||||| ||| || | || |||||||||| | ||
Sbjct: 213 agagtgaacagagcatccacaaagtgctgcttggcaccactctccttgagggccttcgca 154
Query: 917 tgctcctccatgatcttc 934
||||| || |||||||||
Sbjct: 153 tgctcatctatgatcttc 136
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBb0012F18, from chromosome 3, complete sequence
Length = 122903
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 99396 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 99337
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 99336 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 99277
Query: 804 tgtcc 808
|||||
Sbjct: 99276 tgtcc 99272
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNAb0012F18, complete sequence
Length = 122159
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 36493 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 36434
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 36433 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 36374
Query: 804 tgtcc 808
|||||
Sbjct: 36373 tgtcc 36369
>gb|AACV01006705.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006705, whole
genome shotgun sequence
Length = 19638
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 8351 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 8292
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 8291 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 8232
Query: 804 tgtcc 808
|||||
Sbjct: 8231 tgtcc 8227
>ref|NT_079854.2| Oryza sativa (japonica cultivar-group)
Length = 2592259
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 615777 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 615718
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 615717 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 615658
Query: 804 tgtcc 808
|||||
Sbjct: 615657 tgtcc 615653
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011
genomic scaffold, whole genome shotgun sequence
Length = 12704415
Score = 58.0 bits (29), Expect = 1e-005
Identities = 101/125 (80%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctca 743
||||||||||||||||||||| |||||||||| | | || |||| |||||| |||
Sbjct: 848639 cgcggccgacgacgcggtccatctcctcctgcgcccgcgccatcaccgccgggttcttca 848580
Query: 744 gcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatca 803
|| ||||||||||||||||| ||| |||| || ||||||||| ||||| |||| ||
Sbjct: 848579 tcatctccgccatcgcccactccacgatgatcgacgacgtgtccgtcccggccgtgaaca 848520
Query: 804 tgtcc 808
|||||
Sbjct: 848519 tgtcc 848515
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 452 cgctccggccggaactcgagcgggct-gtcccacacc 487
|||||||||||||||||||||||| | ||||||||||
Sbjct: 6935292 cgctccggccggaactcgagcgggttcgtcccacacc 6935328
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 448 gaaccgctccggccggaactcg 469
||||||||||||||||||||||
Sbjct: 3836150 gaaccgctccggccggaactcg 3836171
>dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E07, full
insert sequence
Length = 1865
Score = 56.0 bits (28), Expect = 4e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||||||||||||||||||||||||
Sbjct: 1135 cgcggccgacgacgcggtccagctcctc 1108
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 370 gccggggcacacccggcggccggcgccgaacggcagca 407
||||||||||| ||||||||||| |||||||||||||
Sbjct: 1449 gccggggcacaaccggcggccggacccgaacggcagca 1412
>dbj|AK119569.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-A08, full
insert sequence
Length = 1844
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 452 cgctccggccggaactcgagcgggctgtcccacacc 487
|||||||||||||||||||||||| ||||||||||
Sbjct: 1387 cgctccggccggaactcgagcgggtcgtcccacacc 1352
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
sequence
Length = 152883
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 452 cgctccggccggaactcgagcgggctgtcccacacc 487
|||||||||||||||||||||||| ||||||||||
Sbjct: 118289 cgctccggccggaactcgagcgggtcgtcccacacc 118324
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1344_B01
Length = 170912
Score = 56.0 bits (28), Expect = 4e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||||||||||||||||||||||||
Sbjct: 123919 cgcggccgacgacgcggtccagctcctc 123946
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 370 gccggggcacacccggcggccggcgccgaacggcagca 407
||||||||||| ||||||||||| |||||||||||||
Sbjct: 123605 gccggggcacaaccggcggccggacccgaacggcagca 123642
Score = 48.1 bits (24), Expect = 0.010
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||||||||| ||||||||||||||
Sbjct: 157820 cgcggccgacgacacggtccagctcctc 157793
Score = 48.1 bits (24), Expect = 0.010
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||| ||||||||||||||||||||
Sbjct: 151539 cgcggcccacgacgcggtccagctcctc 151512
>gb|AACV01020088.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020088, whole
genome shotgun sequence
Length = 17961
Score = 56.0 bits (28), Expect = 4e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||||||||||||||||||||||||
Sbjct: 12113 cgcggccgacgacgcggtccagctcctc 12086
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 370 gccggggcacacccggcggccggcgccgaacggcagca 407
||||||||||| ||||||||||| |||||||||||||
Sbjct: 12427 gccggggcacaaccggcggccggacccgaacggcagca 12390
>ref|NM_184786.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1632
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 452 cgctccggccggaactcgagcgggctgtcccacacc 487
|||||||||||||||||||||||| ||||||||||
Sbjct: 1331 cgctccggccggaactcgagcgggtcgtcccacacc 1296
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 56.0 bits (28), Expect = 4e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||||||||||||||||||||||||
Sbjct: 1999206 cgcggccgacgacgcggtccagctcctc 1999233
Score = 52.0 bits (26), Expect = 6e-004
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 743 agcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtga 800
|||||||||||||||||||||| ||||| |||| ||||||| || ||||||||||
Sbjct: 2348982 agcagctccgccatcgcccactccaccgtgatcgagttcgtgtctgtcccggcggtga 2349039
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 370 gccggggcacacccggcggccggcgccgaacggcagca 407
||||||||||| ||||||||||| |||||||||||||
Sbjct: 1998892 gccggggcacaaccggcggccggacccgaacggcagca 1998929
Score = 48.1 bits (24), Expect = 0.010
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||||||||| ||||||||||||||
Sbjct: 2033107 cgcggccgacgacacggtccagctcctc 2033080
Score = 48.1 bits (24), Expect = 0.010
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 684 cgcggccgacgacgcggtccagctcctc 711
||||||| ||||||||||||||||||||
Sbjct: 2026826 cgcggcccacgacgcggtccagctcctc 2026799
Score = 46.1 bits (23), Expect = 0.039
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 587 agcatcagcggcgtcggcgggtgcaggcgcagggactccttga 629
|||| |||||||| |||||||||||| ||||| | ||||||||
Sbjct: 2356525 agcagcagcggcgccggcgggtgcagccgcagcgtctccttga 2356567
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,506,639
Number of Sequences: 438736
Number of extensions: 1506639
Number of successful extensions: 16080
Number of sequences better than 0.5: 163
Number of HSP's better than 0.5 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13674
Number of HSP's gapped (non-prelim): 2353
length of query: 1067
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1046
effective length of database: 2,791,206,460
effective search space: 2919601957160
effective search space used: 2919601957160
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)