BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.3
(1540 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK072748.1| Oryza sativa (japonica cultivar-group) cDNA... 444 e-122
ref|NT_107231.1| Oryza sativa (japonica cultivar-group) 444 e-122
dbj|AP005466.2| Oryza sativa (japonica cultivar-group) geno... 444 e-122
dbj|AP003608.3| Oryza sativa (japonica cultivar-group) geno... 444 e-122
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 444 e-122
gb|AACV01014256.1| Oryza sativa (japonica cultivar-group) c... 381 e-103
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
dbj|AK072708.1| Oryza sativa (japonica cultivar-group) cDNA... 208 7e-051
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 208 7e-051
dbj|AP003626.3| Oryza sativa (japonica cultivar-group) geno... 208 7e-051
dbj|AP003616.4| Oryza sativa (japonica cultivar-group) geno... 208 7e-051
gb|AACV01014531.1| Oryza sativa (japonica cultivar-group) c... 208 7e-051
gb|AU094117.1|AU094117 AU094117 Rice panicle at flowering s... 165 9e-038
ref|XM_464471.1| Oryza sativa (japonica cultivar-group), mRNA 113 3e-022
gb|AACV01014263.1| Oryza sativa (japonica cultivar-group) c... 105 7e-020
gb|C72992.1|C72992 C72992 Rice panicle at flowering stage O... 92 1e-015
gb|C72981.2|C72981 C72981 Rice panicle at flowering stage O... 92 1e-015
dbj|AP004184.3| Oryza sativa (japonica cultivar-group) geno... 88 2e-014
gb|AACV01003552.1| Oryza sativa (japonica cultivar-group) c... 88 2e-014
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 88 2e-014
dbj|AP004191.3| Oryza sativa (japonica cultivar-group) geno... 88 2e-014
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 88 2e-014
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 88 2e-014
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 88 2e-014
gb|AU312180.1|AU312180 AU312180 Oryza sativa anther cDNA Or... 86 7e-014
dbj|AK106802.1| Oryza sativa (japonica cultivar-group) cDNA... 72 1e-009
dbj|AP004886.3| Oryza sativa (japonica cultivar-group) geno... 72 1e-009
ref|XM_463996.1| Oryza sativa (japonica cultivar-group), mRNA 72 1e-009
dbj|AP004150.2| Oryza sativa (japonica cultivar-group) geno... 72 1e-009
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 72 1e-009
dbj|AK103106.1| Oryza sativa (japonica cultivar-group) cDNA... 70 4e-009
dbj|AP002819.1| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|AACV01001867.1| Oryza sativa (japonica cultivar-group) c... 70 4e-009
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
ref|NM_192870.1| Oryza sativa (japonica cultivar-group), p... 70 4e-009
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 70 4e-009
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|AQ690710.1|AQ690710 nbxb0082H20f CUGI Rice BAC Library O... 66 6e-008
dbj|AK069989.1| Oryza sativa (japonica cultivar-group) cDNA... 66 6e-008
ref|XM_463287.1| Oryza sativa (japonica cultivar-group), p... 66 6e-008
gb|AU094002.1|AU094002 AU094002 Rice panicle at flowering s... 64 2e-007
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 64 2e-007
dbj|AP004681.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
dbj|AP003512.3| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AACV01000807.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01001330.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01013994.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
ref|NM_183645.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 64 2e-007
dbj|AP003562.3| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
dbj|AP003140.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|CH401213.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CB652533.1|CB652533 OSJNEc02J24.r OSJNEc Oryza sativa (j... 62 1e-006
gb|AU082676.1|AU082676 AU082676 Rice panicle at flowering s... 56 6e-005
gb|AC120530.3| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|AACV01022704.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|NM_190223.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AC146948.2| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|AZ046313.1|AZ046313 nbeb0091N19r CUGI Rice BAC Library (... 52 0.001
dbj|AK119501.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AP005929.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|AACV01014109.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
dbj|AP003867.1| Oryza sativa (japonica cultivar-group) chro... 48 0.014
dbj|AK069803.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.014
dbj|AP003884.2| Oryza sativa (japonica cultivar-group) geno... 48 0.014
dbj|AP004759.3| Oryza sativa (japonica cultivar-group) geno... 48 0.014
gb|AACV01018116.1| Oryza sativa (japonica cultivar-group) c... 48 0.014
gb|AACV01022705.1| Oryza sativa (japonica cultivar-group) c... 48 0.014
ref|XM_481636.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.014
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 48 0.014
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.014
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.014
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 48 0.014
dbj|AK110223.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.057
dbj|AP002869.1| Oryza sativa (japonica cultivar-group) geno... 46 0.057
gb|AACV01000929.1| Oryza sativa (japonica cultivar-group) c... 46 0.057
gb|AACV01002829.1| Oryza sativa (japonica cultivar-group) c... 46 0.057
ref|NM_183847.1| Oryza sativa (japonica cultivar-group), p... 46 0.057
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 46 0.057
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 46 0.057
dbj|AP003407.3| Oryza sativa (japonica cultivar-group) geno... 46 0.057
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.057
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.057
gb|AC130609.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
dbj|AP004692.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003837.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003748.4| Oryza sativa (japonica cultivar-group) geno... 44 0.22
gb|AACV01011554.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01015402.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01017421.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
ref|XM_476272.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|XM_477091.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_480368.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|NT_107229.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 44 0.22
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401200.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.22
>dbj|AK072748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O11, full
insert sequence
Length = 1559
Score = 444 bits (224), Expect = e-122
Identities = 563/676 (83%)
Strand = Plus / Plus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 602 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 661
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 662 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 721
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 722 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 781
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 782 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 841
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 842 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 901
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 902 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 961
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 962 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 1021
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 1022 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 1081
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 1082 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 1141
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 1142 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 1201
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 1202 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 1261
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 1262 gctgcctcaaggagct 1277
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 451 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 510
Query: 485 gtcaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaac 544
| |||||| ||||||||||||||||| |||||| | ||||| |||||||||||||||||
Sbjct: 511 gccaagaaatacgactgcaagatcctccccaacactttggtgctggacttcgtgaacaac 570
Query: 545 gg 546
||
Sbjct: 571 gg 572
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 217 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 276
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 277 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 336
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 337 gggccatgcaagggcgac 354
>ref|NT_107231.1| Oryza sativa (japonica cultivar-group)
Length = 1372977
Score = 444 bits (224), Expect = e-122
Identities = 563/676 (83%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 110967 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 110908
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 110907 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 110848
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 110847 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 110788
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 110787 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 110728
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 110727 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 110668
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 110667 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 110608
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 110607 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 110548
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 110547 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 110488
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 110487 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 110428
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 110427 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 110368
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 110367 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 110308
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 110307 gctgcctcaaggagct 110292
Score = 436 bits (220), Expect = e-119
Identities = 562/676 (83%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 140325 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 140266
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| |||||||| |||||||||||||||||||| ||| |
Sbjct: 140265 tcaccgcgccgggggacagcccgaacacggatggcatccacatgggcgactcctccaaga 140206
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 140205 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 140146
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 140145 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 140086
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 140085 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 140026
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 140025 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 139966
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 139965 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 139906
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 139905 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 139846
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 139845 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 139786
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 139785 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 139726
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 139725 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 139666
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 139665 gctgcctcaaggagct 139650
Score = 355 bits (179), Expect = 5e-095
Identities = 552/675 (81%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 100740 ccaagttcttccacatgaacatgttcaagtgcaagaacataaccatcaaggacttgacca 100681
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| | ||||||||| |||||||||| ||||||||| ||||||| ||| |
Sbjct: 100680 tcaccgcgccggaggacagcccgaacacggacgacatccacatatgcgactcctccaaga 100621
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| | |||| ||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 100620 tcagcatcatcgacacggtcatcggcaccggcgatgactgcatctccatcggccccggca 100561
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| | |||||| ||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 100560 ccgagggcatcaacatctccggcgtcacctgcggccccggctacggcatcagcgtcggca 100501
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || | |||||||||||||||||||| || || ||| |||||| ||||| ||
Sbjct: 100500 gcctgggcagatacaaggacgagaaggacgtgaccgacgtcaccgtcaaaaactgcgtgc 100441
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | || |||||||||||||| |||||||
Sbjct: 100440 tcaagaagtctaccaatggcgtccggatcaagtcctacgaggacgccgcctcggtgctca 100381
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
|| |||||||| | ||| |||| ||||||||||||||| | ||||||||||||
Sbjct: 100380 ccacctccaagtttacctacaagaacatcaagatggaggacgttgctaaccccatcatca 100321
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 100320 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 100261
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| ||| ||||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 100260 tcaaggacatca-cttcaagaatatcaccggcacctcctccacgcccgaggccgttagcc 100202
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| ||||||| | |||| | || |||||||||||||| || | ||| |||| || |||
Sbjct: 100201 tcttctgctcagacaagctgccgtgcaccggcgtcactttgaatgacatcaatgtcgagt 100142
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| ||||| |||||||||||||||||||| |||||||| || || |||| |||| |
Sbjct: 100141 acgctggcaaaaacaacaagaccatggccgtctgcaagaatgccaaaggcactgccaccg 100082
Query: 1236 gttgcctcaaggagc 1250
| |||||||||||||
Sbjct: 100081 gctgcctcaaggagc 100067
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 140580 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 140521
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 140520 gccaagaaatacgactgcaagatcctccccaac 140488
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 111222 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 111163
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 111162 gccaagaaatacgactgcaagatcctccccaac 111130
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 140814 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 140755
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 140754 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 140695
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 140694 gggccatgcaagggcgac 140677
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 111456 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 111397
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 111396 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 111337
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 111336 gggccatgcaagggcgac 111319
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 101171 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 101119
Score = 63.9 bits (32), Expect = 2e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| ||||| | ||||| |||||||||||| |||| | |||
Sbjct: 100975 cggcaagggcaagatcgacggccagggcgccgccgtctggagcaagaacacctgtgccaa 100916
Query: 490 gaagtacgactgcaagatccttcccaac 517
||| ||| |||||||||||| ||||||
Sbjct: 100915 gaaatacatctgcaagatcctccccaac 100888
>dbj|AP005466.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OJ1212_H09
Length = 129040
Score = 444 bits (224), Expect = e-122
Identities = 563/676 (83%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 58477 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 58418
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 58417 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 58358
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 58357 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 58298
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 58297 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 58238
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 58237 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 58178
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 58177 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 58118
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 58117 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 58058
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 58057 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 57998
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 57997 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 57938
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 57937 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 57878
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 57877 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 57818
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 57817 gctgcctcaaggagct 57802
Score = 436 bits (220), Expect = e-119
Identities = 562/676 (83%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 87835 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 87776
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| |||||||| |||||||||||||||||||| ||| |
Sbjct: 87775 tcaccgcgccgggggacagcccgaacacggatggcatccacatgggcgactcctccaaga 87716
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 87715 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 87656
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 87655 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 87596
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 87595 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 87536
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 87535 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 87476
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 87475 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 87416
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 87415 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 87356
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 87355 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 87296
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 87295 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 87236
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 87235 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 87176
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 87175 gctgcctcaaggagct 87160
Score = 355 bits (179), Expect = 5e-095
Identities = 552/675 (81%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 48250 ccaagttcttccacatgaacatgttcaagtgcaagaacataaccatcaaggacttgacca 48191
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| | ||||||||| |||||||||| ||||||||| ||||||| ||| |
Sbjct: 48190 tcaccgcgccggaggacagcccgaacacggacgacatccacatatgcgactcctccaaga 48131
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| | |||| ||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 48130 tcagcatcatcgacacggtcatcggcaccggcgatgactgcatctccatcggccccggca 48071
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| | |||||| ||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 48070 ccgagggcatcaacatctccggcgtcacctgcggccccggctacggcatcagcgtcggca 48011
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || | |||||||||||||||||||| || || ||| |||||| ||||| ||
Sbjct: 48010 gcctgggcagatacaaggacgagaaggacgtgaccgacgtcaccgtcaaaaactgcgtgc 47951
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | || |||||||||||||| |||||||
Sbjct: 47950 tcaagaagtctaccaatggcgtccggatcaagtcctacgaggacgccgcctcggtgctca 47891
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
|| |||||||| | ||| |||| ||||||||||||||| | ||||||||||||
Sbjct: 47890 ccacctccaagtttacctacaagaacatcaagatggaggacgttgctaaccccatcatca 47831
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 47830 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 47771
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| ||| ||||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 47770 tcaaggacatca-cttcaagaatatcaccggcacctcctccacgcccgaggccgttagcc 47712
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| ||||||| | |||| | || |||||||||||||| || | ||| |||| || |||
Sbjct: 47711 tcttctgctcagacaagctgccgtgcaccggcgtcactttgaatgacatcaatgtcgagt 47652
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| ||||| |||||||||||||||||||| |||||||| || || |||| |||| |
Sbjct: 47651 acgctggcaaaaacaacaagaccatggccgtctgcaagaatgccaaaggcactgccaccg 47592
Query: 1236 gttgcctcaaggagc 1250
| |||||||||||||
Sbjct: 47591 gctgcctcaaggagc 47577
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 88090 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 88031
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 88030 gccaagaaatacgactgcaagatcctccccaac 87998
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 58732 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 58673
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 58672 gccaagaaatacgactgcaagatcctccccaac 58640
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 88324 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 88265
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 88264 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 88205
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 88204 gggccatgcaagggcgac 88187
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 58966 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 58907
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 58906 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 58847
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 58846 gggccatgcaagggcgac 58829
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 48681 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 48629
Score = 63.9 bits (32), Expect = 2e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| ||||| | ||||| |||||||||||| |||| | |||
Sbjct: 48485 cggcaagggcaagatcgacggccagggcgccgccgtctggagcaagaacacctgtgccaa 48426
Query: 490 gaagtacgactgcaagatccttcccaac 517
||| ||| |||||||||||| ||||||
Sbjct: 48425 gaaatacatctgcaagatcctccccaac 48398
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0007G12
Length = 111819
Score = 444 bits (224), Expect = e-122
Identities = 563/676 (83%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 110967 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 110908
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 110907 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 110848
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 110847 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 110788
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 110787 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 110728
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 110727 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 110668
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 110667 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 110608
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 110607 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 110548
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 110547 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 110488
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 110487 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 110428
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 110427 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 110368
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 110367 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 110308
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 110307 gctgcctcaaggagct 110292
Score = 355 bits (179), Expect = 5e-095
Identities = 552/675 (81%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 100740 ccaagttcttccacatgaacatgttcaagtgcaagaacataaccatcaaggacttgacca 100681
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| | ||||||||| |||||||||| ||||||||| ||||||| ||| |
Sbjct: 100680 tcaccgcgccggaggacagcccgaacacggacgacatccacatatgcgactcctccaaga 100621
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| | |||| ||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 100620 tcagcatcatcgacacggtcatcggcaccggcgatgactgcatctccatcggccccggca 100561
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| | |||||| ||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 100560 ccgagggcatcaacatctccggcgtcacctgcggccccggctacggcatcagcgtcggca 100501
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || | |||||||||||||||||||| || || ||| |||||| ||||| ||
Sbjct: 100500 gcctgggcagatacaaggacgagaaggacgtgaccgacgtcaccgtcaaaaactgcgtgc 100441
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | || |||||||||||||| |||||||
Sbjct: 100440 tcaagaagtctaccaatggcgtccggatcaagtcctacgaggacgccgcctcggtgctca 100381
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
|| |||||||| | ||| |||| ||||||||||||||| | ||||||||||||
Sbjct: 100380 ccacctccaagtttacctacaagaacatcaagatggaggacgttgctaaccccatcatca 100321
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 100320 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 100261
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| ||| ||||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 100260 tcaaggacatca-cttcaagaatatcaccggcacctcctccacgcccgaggccgttagcc 100202
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| ||||||| | |||| | || |||||||||||||| || | ||| |||| || |||
Sbjct: 100201 tcttctgctcagacaagctgccgtgcaccggcgtcactttgaatgacatcaatgtcgagt 100142
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| ||||| |||||||||||||||||||| |||||||| || || |||| |||| |
Sbjct: 100141 acgctggcaaaaacaacaagaccatggccgtctgcaagaatgccaaaggcactgccaccg 100082
Query: 1236 gttgcctcaaggagc 1250
| |||||||||||||
Sbjct: 100081 gctgcctcaaggagc 100067
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 111222 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 111163
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 111162 gccaagaaatacgactgcaagatcctccccaac 111130
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 111456 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 111397
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 111396 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 111337
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 111336 gggccatgcaagggcgac 111319
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 101171 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 101119
Score = 63.9 bits (32), Expect = 2e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| ||||| | ||||| |||||||||||| |||| | |||
Sbjct: 100975 cggcaagggcaagatcgacggccagggcgccgccgtctggagcaagaacacctgtgccaa 100916
Query: 490 gaagtacgactgcaagatccttcccaac 517
||| ||| |||||||||||| ||||||
Sbjct: 100915 gaaatacatctgcaagatcctccccaac 100888
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 444 bits (224), Expect = e-122
Identities = 563/676 (83%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 20244967 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 20244908
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 20244907 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 20244848
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 20244847 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 20244788
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 20244787 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 20244728
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 20244727 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 20244668
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 20244667 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 20244608
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 20244607 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 20244548
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 20244547 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 20244488
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 20244487 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 20244428
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 20244427 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 20244368
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 20244367 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 20244308
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 20244307 gctgcctcaaggagct 20244292
Score = 436 bits (220), Expect = e-119
Identities = 562/676 (83%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 20274325 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 20274266
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| |||||||| |||||||||||||||||||| ||| |
Sbjct: 20274265 tcaccgcgccgggggacagcccgaacacggatggcatccacatgggcgactcctccaaga 20274206
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 20274205 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 20274146
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 20274145 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 20274086
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 20274085 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 20274026
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 20274025 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 20273966
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 20273965 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 20273906
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 20273905 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 20273846
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||
Sbjct: 20273845 tcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggccgttagcc 20273786
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 20273785 tcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 20273726
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 20273725 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 20273666
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 20273665 gctgcctcaaggagct 20273650
Score = 355 bits (179), Expect = 5e-095
Identities = 552/675 (81%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 20234740 ccaagttcttccacatgaacatgttcaagtgcaagaacataaccatcaaggacttgacca 20234681
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| | ||||||||| |||||||||| ||||||||| ||||||| ||| |
Sbjct: 20234680 tcaccgcgccggaggacagcccgaacacggacgacatccacatatgcgactcctccaaga 20234621
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| | |||| ||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 20234620 tcagcatcatcgacacggtcatcggcaccggcgatgactgcatctccatcggccccggca 20234561
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| | |||||| ||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 20234560 ccgagggcatcaacatctccggcgtcacctgcggccccggctacggcatcagcgtcggca 20234501
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || | |||||||||||||||||||| || || ||| |||||| ||||| ||
Sbjct: 20234500 gcctgggcagatacaaggacgagaaggacgtgaccgacgtcaccgtcaaaaactgcgtgc 20234441
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | || |||||||||||||| |||||||
Sbjct: 20234440 tcaagaagtctaccaatggcgtccggatcaagtcctacgaggacgccgcctcggtgctca 20234381
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
|| |||||||| | ||| |||| ||||||||||||||| | ||||||||||||
Sbjct: 20234380 ccacctccaagtttacctacaagaacatcaagatggaggacgttgctaaccccatcatca 20234321
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 20234320 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 20234261
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| ||| ||||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 20234260 tcaaggacatca-cttcaagaatatcaccggcacctcctccacgcccgaggccgttagcc 20234202
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| ||||||| | |||| | || |||||||||||||| || | ||| |||| || |||
Sbjct: 20234201 tcttctgctcagacaagctgccgtgcaccggcgtcactttgaatgacatcaatgtcgagt 20234142
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| ||||| |||||||||||||||||||| |||||||| || || |||| |||| |
Sbjct: 20234141 acgctggcaaaaacaacaagaccatggccgtctgcaagaatgccaaaggcactgccaccg 20234082
Query: 1236 gttgcctcaaggagc 1250
| |||||||||||||
Sbjct: 20234081 gctgcctcaaggagc 20234067
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 24001620 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 24001679
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 24001680 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 24001739
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 24001740 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 24001799
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 24001800 tacaaggacgagcgggacgtc 24001820
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 20274580 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 20274521
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 20274520 gccaagaaatacgactgcaagatcctccccaac 20274488
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 20245222 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 20245163
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 20245162 gccaagaaatacgactgcaagatcctccccaac 20245130
Score = 97.6 bits (49), Expect = 2e-017
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 24000848 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 24000907
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaac 517
||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 24000908 aagaactcctgcgccaagaactacaactgcaagctcctccccaac 24000952
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 20274814 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 20274755
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 20274754 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 20274695
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 20274694 gggccatgcaagggcgac 20274677
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 20245456 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 20245397
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 20245396 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 20245337
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 20245336 gggccatgcaagggcgac 20245319
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 536 gtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||| |||||| |||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 24001509 gtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaac 24001568
Query: 596 atgtacaagtgcaaggacat 615
|| ||| ||||||||||||
Sbjct: 24001569 atctaccggtgcaaggacat 24001588
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 24001957 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 24002016
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 24002017 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 24002059
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 24000656 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 24000702
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 20235171 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 20235119
Score = 63.9 bits (32), Expect = 2e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| ||||| | ||||| |||||||||||| |||| | |||
Sbjct: 20234975 cggcaagggcaagatcgacggccagggcgccgccgtctggagcaagaacacctgtgccaa 20234916
Query: 490 gaagtacgactgcaagatccttcccaac 517
||| ||| |||||||||||| ||||||
Sbjct: 20234915 gaaatacatctgcaagatcctccccaac 20234888
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 775 cggcgtgacctgcggccccggccacggcatcagcatcggc 814
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 16112675 cggcgtcacctgcggcccgggccacggcatcagcatcggc 16112714
Score = 50.1 bits (25), Expect = 0.004
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||| ||||| |||||||||| | | || | |||| | |||||||| |
Sbjct: 23997437 cggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtc 23997496
Query: 784 ctgcggccccggccacggcatcagc 808
||||||||||| ||||||||||||
Sbjct: 23997497 gtgcggccccgggcacggcatcagc 23997521
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccacat 678
||||||||||||||||||||| |||||||
Sbjct: 23997363 gacagccccaacacggacggcgtccacat 23997391
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctcc 760
||||||||||||| |||||||||| |||||| |||||
Sbjct: 17969513 cggcgacgactgcgtctccatcgggcccgggtcctcc 17969549
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccac 676
|||||||| ||||||||||||||||||
Sbjct: 16112550 gacagcccaaacacggacggcatccac 16112576
>gb|AACV01014256.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014256, whole
genome shotgun sequence
Length = 44535
Score = 381 bits (192), Expect = e-103
Identities = 555/676 (82%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 26168 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 26109
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 26108 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 26049
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 26048 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 25989
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 25988 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 25929
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 25928 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 25869
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 25868 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 25809
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 25808 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 25749
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 25748 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 25689
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||| ||||| || || |||| || |||| ||| | ||
Sbjct: 25688 tcaaggacatcaccttcaagaacattaccggaacttcttccaagcccgagggcgttagcc 25629
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 25628 ctccctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 25569
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 25568 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 25509
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 25508 gctgcctcaaggagct 25493
Score = 355 bits (179), Expect = 5e-095
Identities = 552/675 (81%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 15931 ccaagttcttccacatgaacatgttcaagtgcaagaacataaccatcaaggacttgacca 15872
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| | ||||||||| |||||||||| ||||||||| ||||||| ||| |
Sbjct: 15871 tcaccgcgccggaggacagcccgaacacggacgacatccacatatgcgactcctccaaga 15812
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| | |||| ||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 15811 tcagcatcatcgacacggtcatcggcaccggcgatgactgcatctccatcggccccggca 15752
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| | |||||| ||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 15751 ccgagggcatcaacatctccggcgtcacctgcggccccggctacggcatcagcgtcggca 15692
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || | |||||||||||||||||||| || || ||| |||||| ||||| ||
Sbjct: 15691 gcctgggcagatacaaggacgagaaggacgtgaccgacgtcaccgtcaaaaactgcgtgc 15632
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | || |||||||||||||| |||||||
Sbjct: 15631 tcaagaagtctaccaatggcgtccggatcaagtcctacgaggacgccgcctcggtgctca 15572
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
|| |||||||| | ||| |||| ||||||||||||||| | ||||||||||||
Sbjct: 15571 ccacctccaagtttacctacaagaacatcaagatggaggacgttgctaaccccatcatca 15512
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 15511 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 15452
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| ||| ||||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 15451 tcaaggacatca-cttcaagaatatcaccggcacctcctccacgcccgaggccgttagcc 15393
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| ||||||| | |||| | || |||||||||||||| || | ||| |||| || |||
Sbjct: 15392 tcttctgctcagacaagctgccgtgcaccggcgtcactttgaatgacatcaatgtcgagt 15333
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| ||||| |||||||||||||||||||| |||||||| || || |||| |||| |
Sbjct: 15332 acgctggcaaaaacaacaagaccatggccgtctgcaagaatgccaaaggcactgccaccg 15273
Query: 1236 gttgcctcaaggagc 1250
| |||||||||||||
Sbjct: 15272 gctgcctcaaggagc 15258
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 26423 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 26364
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 26363 gccaagaaatacgactgcaagatcctccccaac 26331
Score = 75.8 bits (38), Expect = 6e-011
Identities = 114/138 (82%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 26656 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 26597
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || | ||||||||||||||| | || || |||||||||||
Sbjct: 26596 ggcaagcagacgatcgtcgt-cccaagggcgacttcttgacgggtcccctcaacttcacc 26538
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 26537 gggccatgcaagggcgac 26520
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 16362 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 16310
Score = 63.9 bits (32), Expect = 2e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| ||||| | ||||| |||||||||||| |||| | |||
Sbjct: 16166 cggcaagggcaagatcgacggccagggcgccgccgtctggagcaagaacacctgtgccaa 16107
Query: 490 gaagtacgactgcaagatccttcccaac 517
||| ||| |||||||||||| ||||||
Sbjct: 16106 gaaatacatctgcaagatcctccccaac 16079
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 381 bits (192), Expect = e-103
Identities = 555/676 (82%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 1644383 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 1644324
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 1644323 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 1644264
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 1644263 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 1644204
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 1644203 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 1644144
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 1644143 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 1644084
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 1644083 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 1644024
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 1644023 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 1643964
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 1643963 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 1643904
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||| ||||| || || |||| || |||| ||| | ||
Sbjct: 1643903 tcaaggacatcaccttcaagaacattaccggaacttcttccaagcccgagggcgttagcc 1643844
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 1643843 ctccctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 1643784
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 1643783 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 1643724
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 1643723 gctgcctcaaggagct 1643708
Score = 355 bits (179), Expect = 5e-095
Identities = 552/675 (81%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 1634146 ccaagttcttccacatgaacatgttcaagtgcaagaacataaccatcaaggacttgacca 1634087
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| | ||||||||| |||||||||| ||||||||| ||||||| ||| |
Sbjct: 1634086 tcaccgcgccggaggacagcccgaacacggacgacatccacatatgcgactcctccaaga 1634027
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| | |||| ||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 1634026 tcagcatcatcgacacggtcatcggcaccggcgatgactgcatctccatcggccccggca 1633967
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| | |||||| ||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 1633966 ccgagggcatcaacatctccggcgtcacctgcggccccggctacggcatcagcgtcggca 1633907
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || | |||||||||||||||||||| || || ||| |||||| ||||| ||
Sbjct: 1633906 gcctgggcagatacaaggacgagaaggacgtgaccgacgtcaccgtcaaaaactgcgtgc 1633847
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | || |||||||||||||| |||||||
Sbjct: 1633846 tcaagaagtctaccaatggcgtccggatcaagtcctacgaggacgccgcctcggtgctca 1633787
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
|| |||||||| | ||| |||| ||||||||||||||| | ||||||||||||
Sbjct: 1633786 ccacctccaagtttacctacaagaacatcaagatggaggacgttgctaaccccatcatca 1633727
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 1633726 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 1633667
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| ||| ||||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 1633666 tcaaggacatca-cttcaagaatatcaccggcacctcctccacgcccgaggccgttagcc 1633608
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| ||||||| | |||| | || |||||||||||||| || | ||| |||| || |||
Sbjct: 1633607 tcttctgctcagacaagctgccgtgcaccggcgtcactttgaatgacatcaatgtcgagt 1633548
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| ||||| |||||||||||||||||||| |||||||| || || |||| |||| |
Sbjct: 1633547 acgctggcaaaaacaacaagaccatggccgtctgcaagaatgccaaaggcactgccaccg 1633488
Query: 1236 gttgcctcaaggagc 1250
| |||||||||||||
Sbjct: 1633487 gctgcctcaaggagc 1633473
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 5322918 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 5322977
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 5322978 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 5323037
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 5323038 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 5323097
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 5323098 tacaaggacgagcgggacgtc 5323118
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 1706460 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 1706401
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 1706400 gccaagaaatacgactgcaagatcctccccaac 1706368
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 1644638 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 1644579
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 1644578 gccaagaaatacgactgcaagatcctccccaac 1644546
Score = 97.6 bits (49), Expect = 2e-017
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 5322146 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 5322205
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaac 517
||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 5322206 aagaactcctgcgccaagaactacaactgcaagctcctccccaac 5322250
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 1706694 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 1706635
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 1706634 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 1706575
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 1706574 gggccatgcaagggcgac 1706557
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 536 gtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||| |||||| |||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 5322807 gtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaac 5322866
Query: 596 atgtacaagtgcaaggacat 615
|| ||| ||||||||||||
Sbjct: 5322867 atctaccggtgcaaggacat 5322886
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 5323255 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 5323314
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 5323315 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 5323357
Score = 75.8 bits (38), Expect = 6e-011
Identities = 114/138 (82%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 1644871 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 1644812
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || | ||||||||||||||| | || || |||||||||||
Sbjct: 1644811 ggcaagcagacgatcgtcgt-cccaagggcgacttcttgacgggtcccctcaacttcacc 1644753
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 1644752 gggccatgcaagggcgac 1644735
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 5321954 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 5322000
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 1634577 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 1634525
Score = 63.9 bits (32), Expect = 2e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| ||||| | ||||| |||||||||||| |||| | |||
Sbjct: 1634381 cggcaagggcaagatcgacggccagggcgccgccgtctggagcaagaacacctgtgccaa 1634322
Query: 490 gaagtacgactgcaagatccttcccaac 517
||| ||| |||||||||||| ||||||
Sbjct: 1634321 gaaatacatctgcaagatcctccccaac 1634294
Score = 50.1 bits (25), Expect = 0.004
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||| ||||| |||||||||| | | || | |||| | |||||||| |
Sbjct: 5318735 cggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtc 5318794
Query: 784 ctgcggccccggccacggcatcagc 808
||||||||||| ||||||||||||
Sbjct: 5318795 gtgcggccccgggcacggcatcagc 5318819
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccacat 678
||||||||||||||||||||| |||||||
Sbjct: 5318661 gacagccccaacacggacggcgtccacat 5318689
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 381 bits (192), Expect = e-103
Identities = 555/676 (82%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||| ||| |||| | ||| |||| ||||||||||| |
Sbjct: 19343120 ccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaaggacgtgacca 19343061
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 19343060 tcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgactcctccaaga 19343001
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| |||| ||||||||| |||||| || |||||||||||||||||||| |
Sbjct: 19343000 tcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatcggccccggca 19342941
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| || |||||| ||||||| |||||||| || ||||||||||||||| |||| |
Sbjct: 19342940 ccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatcagcgtcggta 19342881
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || ||||||||||||||||||| || |||||| | | ||||||| ||||| ||
Sbjct: 19342880 gcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaagaactgcgtgc 19342821
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | ||||||||||||||||| |||||||
Sbjct: 19342820 tcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcctcggtgctca 19342761
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 19342760 ccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaaccccatcatca 19342701
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 19342700 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 19342641
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| |||||||||||||||| ||||| || || |||| || |||| ||| | ||
Sbjct: 19342640 tcaaggacatcaccttcaagaacattaccggaacttcttccaagcccgagggcgttagcc 19342581
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| |||||| | |||| | || ||||||||||||||| || | ||| |||| || |||
Sbjct: 19342580 ctccctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaaggtcgagt 19342521
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| |||||| |||||||||||||||||||| |||||||| || ||||||| |||| |
Sbjct: 19342520 actctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcactgccaccg 19342461
Query: 1236 gttgcctcaaggagct 1251
| ||||||||||||||
Sbjct: 19342460 gctgcctcaaggagct 19342445
Score = 355 bits (179), Expect = 5e-095
Identities = 552/675 (81%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 576 ccaagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatg 635
|||||||||||||||||||||||| |||||||||| |||| ||||||||| | |
Sbjct: 19332883 ccaagttcttccacatgaacatgttcaagtgcaagaacataaccatcaaggacttgacca 19332824
Query: 636 tgacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccgggg 695
| || ||||| | ||||||||| |||||||||| ||||||||| ||||||| ||| |
Sbjct: 19332823 tcaccgcgccggaggacagcccgaacacggacgacatccacatatgcgactcctccaaga 19332764
Query: 696 tcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggga 755
||| ||||| | |||| ||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 19332763 tcagcatcatcgacacggtcatcggcaccggcgatgactgcatctccatcggccccggca 19332704
Query: 756 cctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggca 815
|| | |||||| ||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 19332703 ccgagggcatcaacatctccggcgtcacctgcggccccggctacggcatcagcgtcggca 19332644
Query: 816 gcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgc 875
|||| || | |||||||||||||||||||| || || ||| |||||| ||||| ||
Sbjct: 19332643 gcctgggcagatacaaggacgagaaggacgtgaccgacgtcaccgtcaaaaactgcgtgc 19332584
Query: 876 ttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctca 935
| |||||| | |||| |||||||| |||||| | || |||||||||||||| |||||||
Sbjct: 19332583 tcaagaagtctaccaatggcgtccggatcaagtcctacgaggacgccgcctcggtgctca 19332524
Query: 936 ccgcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatca 995
|| |||||||| | ||| |||| ||||||||||||||| | ||||||||||||
Sbjct: 19332523 ccacctccaagtttacctacaagaacatcaagatggaggacgttgctaaccccatcatca 19332464
Query: 996 tcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccg 1055
|||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct: 19332463 tcgacatgaagtactgccccaacaagatctgcactgccaacggcaactccaaggtcacca 19332404
Query: 1056 tcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacc 1115
|||||||| ||| ||||||||| |||||||||||||||||||| || |||||||| | ||
Sbjct: 19332403 tcaaggacatca-cttcaagaatatcaccggcacctcctccacgcccgaggccgttagcc 19332345
Query: 1116 tgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagt 1175
| ||||||| | |||| | || |||||||||||||| || | ||| |||| || |||
Sbjct: 19332344 tcttctgctcagacaagctgccgtgcaccggcgtcactttgaatgacatcaatgtcgagt 19332285
Query: 1176 acagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagg 1235
|| ||||| |||||||||||||||||||| |||||||| || || |||| |||| |
Sbjct: 19332284 acgctggcaaaaacaacaagaccatggccgtctgcaagaatgccaaaggcactgccaccg 19332225
Query: 1236 gttgcctcaaggagc 1250
| |||||||||||||
Sbjct: 19332224 gctgcctcaaggagc 19332210
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 23021655 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 23021714
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 23021715 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 23021774
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 23021775 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 23021834
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 23021835 tacaaggacgagcgggacgtc 23021855
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 19405197 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 19405138
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 19405137 gccaagaaatacgactgcaagatcctccccaac 19405105
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 19343375 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 19343316
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 19343315 gccaagaaatacgactgcaagatcctccccaac 19343283
Score = 97.6 bits (49), Expect = 2e-017
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 23020883 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 23020942
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaac 517
||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 23020943 aagaactcctgcgccaagaactacaactgcaagctcctccccaac 23020987
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 19405431 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 19405372
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 19405371 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 19405312
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 19405311 gggccatgcaagggcgac 19405294
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 536 gtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||| |||||| |||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 23021544 gtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaac 23021603
Query: 596 atgtacaagtgcaaggacat 615
|| ||| ||||||||||||
Sbjct: 23021604 atctaccggtgcaaggacat 23021623
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 23021992 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 23022051
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 23022052 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 23022094
Score = 75.8 bits (38), Expect = 6e-011
Identities = 114/138 (82%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 19343608 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 19343549
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || | ||||||||||||||| | || || |||||||||||
Sbjct: 19343548 ggcaagcagacgatcgtcgt-cccaagggcgacttcttgacgggtcccctcaacttcacc 19343490
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 19343489 gggccatgcaagggcgac 19343472
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 23020691 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 23020737
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 19333314 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 19333262
Score = 63.9 bits (32), Expect = 2e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| ||||| | ||||| |||||||||||| |||| | |||
Sbjct: 19333118 cggcaagggcaagatcgacggccagggcgccgccgtctggagcaagaacacctgtgccaa 19333059
Query: 490 gaagtacgactgcaagatccttcccaac 517
||| ||| |||||||||||| ||||||
Sbjct: 19333058 gaaatacatctgcaagatcctccccaac 19333031
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 775 cggcgtgacctgcggccccggccacggcatcagcatcggc 814
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 15624092 cggcgtcacctgcggcccgggccacggcatcagcatcggc 15624131
Score = 50.1 bits (25), Expect = 0.004
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||| ||||| |||||||||| | | || | |||| | |||||||| |
Sbjct: 23017472 cggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtc 23017531
Query: 784 ctgcggccccggccacggcatcagc 808
||||||||||| ||||||||||||
Sbjct: 23017532 gtgcggccccgggcacggcatcagc 23017556
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccacat 678
||||||||||||||||||||| |||||||
Sbjct: 23017398 gacagccccaacacggacggcgtccacat 23017426
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctcc 760
||||||||||||| |||||||||| |||||| |||||
Sbjct: 17502672 cggcgacgactgcgtctccatcgggcccgggtcctcc 17502708
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccac 676
|||||||| ||||||||||||||||||
Sbjct: 15623967 gacagcccaaacacggacggcatccac 15623993
>dbj|AK072708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142F24, full
insert sequence
Length = 1503
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 711 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 770
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 771 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 830
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 831 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 890
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 891 tacaaggacgagcgggacgtc 911
Score = 172 bits (87), Expect = 4e-040
Identities = 174/203 (85%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 477 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 536
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaactcgctggtgatggac 532
||||||||||||| |||||| ||| |||||||| |||| |||||| |||||||| || ||
Sbjct: 537 aagaactcctgcgccaagaactacaactgcaagctcctccccaacacgctggtgctgaac 596
Query: 533 ttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatg 592
|||||| |||||| |||| ||||||||||||||| ||| |||||||||||||||||
Sbjct: 597 acggtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatg 656
Query: 593 aacatgtacaagtgcaaggacat 615
||||| ||| ||||||||||||
Sbjct: 657 aacatctaccggtgcaaggacat 679
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 1048 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 1107
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 1108 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 1150
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 285 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 331
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 1467105 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 1467164
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 1467165 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 1467224
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 1467225 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 1467284
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 1467285 tacaaggacgagcgggacgtc 1467305
Score = 97.6 bits (49), Expect = 2e-017
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 1466333 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 1466392
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaac 517
||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 1466393 aagaactcctgcgccaagaactacaactgcaagctcctccccaac 1466437
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 536 gtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||| |||||| |||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 1466994 gtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaac 1467053
Query: 596 atgtacaagtgcaaggacat 615
|| ||| ||||||||||||
Sbjct: 1467054 atctaccggtgcaaggacat 1467073
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 1467442 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 1467501
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 1467502 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 1467544
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 1466141 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 1466187
Score = 50.1 bits (25), Expect = 0.004
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||| ||||| |||||||||| | | || | |||| | |||||||| |
Sbjct: 1462922 cggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtc 1462981
Query: 784 ctgcggccccggccacggcatcagc 808
||||||||||| ||||||||||||
Sbjct: 1462982 gtgcggccccgggcacggcatcagc 1463006
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccacat 678
||||||||||||||||||||| |||||||
Sbjct: 1462848 gacagccccaacacggacggcgtccacat 1462876
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0429G06
Length = 158321
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 11313 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 11372
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 11373 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 11432
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 11433 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 11492
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 11493 tacaaggacgagcgggacgtc 11513
Score = 97.6 bits (49), Expect = 2e-017
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 10541 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 10600
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaac 517
||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 10601 aagaactcctgcgccaagaactacaactgcaagctcctccccaac 10645
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 536 gtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||| |||||| |||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 11202 gtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaac 11261
Query: 596 atgtacaagtgcaaggacat 615
|| ||| ||||||||||||
Sbjct: 11262 atctaccggtgcaaggacat 11281
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 11650 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 11709
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 11710 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 11752
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 10349 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 10395
Score = 50.1 bits (25), Expect = 0.004
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||| ||||| |||||||||| | | || | |||| | |||||||| |
Sbjct: 7130 cggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtc 7189
Query: 784 ctgcggccccggccacggcatcagc 808
||||||||||| ||||||||||||
Sbjct: 7190 gtgcggccccgggcacggcatcagc 7214
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccacat 678
||||||||||||||||||||| |||||||
Sbjct: 7056 gacagccccaacacggacggcgtccacat 7084
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0490F09
Length = 149542
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 131231 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 131290
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 131291 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 131350
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 131351 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 131410
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 131411 tacaaggacgagcgggacgtc 131431
Score = 97.6 bits (49), Expect = 2e-017
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 130459 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 130518
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaac 517
||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 130519 aagaactcctgcgccaagaactacaactgcaagctcctccccaac 130563
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 536 gtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||| |||||| |||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 131120 gtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaac 131179
Query: 596 atgtacaagtgcaaggacat 615
|| ||| ||||||||||||
Sbjct: 131180 atctaccggtgcaaggacat 131199
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 131568 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 131627
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 131628 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 131670
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 130267 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 130313
Score = 50.1 bits (25), Expect = 0.004
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||| ||||| |||||||||| | | || | |||| | |||||||| |
Sbjct: 127048 cggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtc 127107
Query: 784 ctgcggccccggccacggcatcagc 808
||||||||||| ||||||||||||
Sbjct: 127108 gtgcggccccgggcacggcatcagc 127132
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccacat 678
||||||||||||||||||||| |||||||
Sbjct: 126974 gacagccccaacacggacggcgtccacat 127002
>gb|AACV01014531.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014531, whole
genome shotgun sequence
Length = 41492
Score = 208 bits (105), Expect = 7e-051
Identities = 177/201 (88%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| ||
Sbjct: 31986 ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc 32045
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||| ||||||| |||||||||||||||||||||||||||||| ||| | ||
Sbjct: 32046 gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc 32105
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 32106 aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg 32165
Query: 827 tacaaggacgagaaggacgtc 847
|||||||||||| |||||||
Sbjct: 32166 tacaaggacgagcgggacgtc 32186
Score = 97.6 bits (49), Expect = 2e-017
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 413 gacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagc 472
|||||| | |||||| |||||||||| ||||||||||| ||||| || | ||| ||||||
Sbjct: 31214 gacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagc 31273
Query: 473 aagaactcctgcgtcaagaagtacgactgcaagatccttcccaac 517
||||||||||||| |||||| ||| |||||||| |||| ||||||
Sbjct: 31274 aagaactcctgcgccaagaactacaactgcaagctcctccccaac 31318
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 536 gtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||| |||||| |||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 31875 gtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaac 31934
Query: 596 atgtacaagtgcaaggacat 615
|| ||| ||||||||||||
Sbjct: 31935 atctaccggtgcaaggacat 31954
Score = 85.7 bits (43), Expect = 7e-014
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 984 accccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcct 1043
||||||||||||||||| ||||||||||||||||| | |||||| ||| || | ||
Sbjct: 32323 accccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgact 32382
Query: 1044 ccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccgg 1086
||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 32383 ccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgg 32425
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaaggg 273
|||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct: 31022 tcggcgtgcgccggcgccgggaagcagacgatcctgatccccaaggg 31068
Score = 50.1 bits (25), Expect = 0.004
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||| ||||| |||||||||| | | || | |||| | |||||||| |
Sbjct: 27803 cggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtc 27862
Query: 784 ctgcggccccggccacggcatcagc 808
||||||||||| ||||||||||||
Sbjct: 27863 gtgcggccccgggcacggcatcagc 27887
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccacat 678
||||||||||||||||||||| |||||||
Sbjct: 27729 gacagccccaacacggacggcgtccacat 27757
>gb|AU094117.1|AU094117 AU094117 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2591, mRNA sequence
Length = 478
Score = 165 bits (83), Expect = 9e-038
Identities = 173/203 (85%)
Strand = Plus / Plus
Query: 1049 gtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggcc 1108
|||||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 1 gtcaccatcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgaggcc 60
Query: 1109 gtcaacctgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaac 1168
|| | ||| |||||||| | |||| | || ||||||||||||||| || | ||| ||||
Sbjct: 61 gttagcctcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatcaag 120
Query: 1169 atcaagtacagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagc 1228
|| ||||| |||||| |||||||||||||||||||| |||||||| || |||||||
Sbjct: 121 gtcgagtactctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggcact 180
Query: 1229 gccaagggttgcctcaaggagct 1251
|||| || ||||||||||||||
Sbjct: 181 gccaccggctgcctcaaggagct 203
>ref|XM_464471.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1269
Score = 113 bits (57), Expect = 3e-022
Identities = 168/205 (81%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 647 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 706
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctcca 761
||| | |||| ||||| || |||||||||||||||||||||||||||||| ||| |
Sbjct: 707 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccggcaccaaga 766
Query: 762 aggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctag 821
||| | ||| |||||| ||| |||||||| ||||||||| | |||||||||| |
Sbjct: 767 tggtccgcgtcaacggcgtccgctgtggccccggtcacggcatctccgtcggcagcctcg 826
Query: 822 ggcggtacaaggacgagaaggacgt 846
| |||||||||||||||||||||||
Sbjct: 827 gccggtacaaggacgagaaggacgt 851
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 986 gctacccgatcatcatcgaccagaagtactgccccaacaa 1025
>gb|AACV01014263.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014263,
whole genome shotgun sequence
Length = 4633
Score = 105 bits (53), Expect = 7e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||| ||||||||| ||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 201 atcagcggcaagggcaagctcgacggccagggcgccgccgtctggagcaagaactcctgc 142
Query: 485 gtcaagaagtacgactgcaagatccttcccaac 517
| |||||| ||||||||||||||||| ||||||
Sbjct: 141 gccaagaaatacgactgcaagatcctccccaac 109
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 435 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 376
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 375 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 316
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 315 gggccatgcaagggcgac 298
>gb|C72992.1|C72992 C72992 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2619_1A, mRNA sequence
Length = 463
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 195 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 254
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 255 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 314
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 315 gggccatgcaagggcgac 332
>gb|C72981.2|C72981 C72981 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2591_2A, mRNA sequence
Length = 470
Score = 91.7 bits (46), Expect = 1e-015
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||||||| ||||| ||||| || | ||||||||| | ||||||||| ||||||
Sbjct: 198 ggcaagacggacagcaccaaggcggtcaacgaggcgtggacggcggcgtgcgctggcacc 257
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
|| |||||||||||| || ||||||||||||||||| | || || |||||||||||
Sbjct: 258 ggcaagcagacgatcgtcgtccccaagggcgacttcttgacgggtcccctcaacttcacc 317
Query: 305 ggcccatgcaagggcgac 322
|| |||||||||||||||
Sbjct: 318 gggccatgcaagggcgac 335
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1225_F07
Length = 142772
Score = 87.7 bits (44), Expect = 2e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 138903 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 138962
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgg 753
||| | |||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 138963 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccgg 139014
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 139741 gctacccgatcatcatcgaccagaagtactgccccaacaa 139780
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 825 ggtacaaggacgagaaggacgt 846
||||||||||||||||||||||
Sbjct: 139585 ggtacaaggacgagaaggacgt 139606
>gb|AACV01003552.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003552,
whole genome shotgun sequence
Length = 23711
Score = 87.7 bits (44), Expect = 2e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 270 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 329
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgg 753
||| | |||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 330 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccgg 381
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 1108 gctacccgatcatcatcgaccagaagtactgccccaacaa 1147
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 825 ggtacaaggacgagaaggacgt 846
||||||||||||||||||||||
Sbjct: 952 ggtacaaggacgagaaggacgt 973
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 87.7 bits (44), Expect = 2e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 784672 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 784731
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgg 753
||| | |||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 784732 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccgg 784783
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 785510 gctacccgatcatcatcgaccagaagtactgccccaacaa 785549
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 825 ggtacaaggacgagaaggacgt 846
||||||||||||||||||||||
Sbjct: 785354 ggtacaaggacgagaaggacgt 785375
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1524_D08
Length = 143046
Score = 87.7 bits (44), Expect = 2e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 66181 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 66240
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgg 753
||| | |||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 66241 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccgg 66292
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 67019 gctacccgatcatcatcgaccagaagtactgccccaacaa 67058
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 825 ggtacaaggacgagaaggacgt 846
||||||||||||||||||||||
Sbjct: 66863 ggtacaaggacgagaaggacgt 66884
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 87.7 bits (44), Expect = 2e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 5515841 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 5515900
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgg 753
||| | |||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 5515901 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccgg 5515952
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 5516679 gctacccgatcatcatcgaccagaagtactgccccaacaa 5516718
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 825 ggtacaaggacgagaaggacgt 846
||||||||||||||||||||||
Sbjct: 5516523 ggtacaaggacgagaaggacgt 5516544
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 87.7 bits (44), Expect = 2e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 5515841 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 5515900
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgg 753
||| | |||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 5515901 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccgg 5515952
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 5516679 gctacccgatcatcatcgaccagaagtactgccccaacaa 5516718
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 825 ggtacaaggacgagaaggacgt 846
||||||||||||||||||||||
Sbjct: 5516523 ggtacaaggacgagaaggacgt 5516544
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 87.7 bits (44), Expect = 2e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 642 cgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacca 701
|||| ||||||||||| |||||||||||||||||| | |||||||| || ||||||
Sbjct: 5412600 cgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaacatcacca 5412659
Query: 702 tcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgg 753
||| | |||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 5412660 tcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccgg 5412711
Score = 71.9 bits (36), Expect = 1e-009
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||||||||||||||||||
Sbjct: 1570959 ctgcggccccggccacggcatcagcatcggcagcct 1570924
Score = 56.0 bits (28), Expect = 6e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 5413438 gctacccgatcatcatcgaccagaagtactgccccaacaa 5413477
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 825 ggtacaaggacgagaaggacgt 846
||||||||||||||||||||||
Sbjct: 5413282 ggtacaaggacgagaaggacgt 5413303
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 724 cggcgacgactgcatctccatc 745
||||||||||||||||||||||
Sbjct: 1571019 cggcgacgactgcatctccatc 1570998
>gb|AU312180.1|AU312180 AU312180 Oryza sativa anther cDNA Oryza sativa (japonica
cultivar-group) cDNA clone JRA1658, mRNA sequence
Length = 356
Score = 85.7 bits (43), Expect = 7e-014
Identities = 121/147 (82%)
Strand = Plus / Plus
Query: 1105 ggccgtcaacctgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgt 1164
|||||| | ||| |||||||| | |||| | || ||||||||||||||| || | ||| |
Sbjct: 2 ggccgttagcctcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacat 61
Query: 1165 caacatcaagtacagtggcaccaacaacaagaccatggccgtatgcaagaacgctaaggg 1224
||| || ||||| |||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 62 caaggtcgagtactctggcacaaacaacaagaccatggccgtctgcaagaatgccaaggg 121
Query: 1225 cagcgccaagggttgcctcaaggagct 1251
|| |||| || ||||||||||||||
Sbjct: 122 cactgccaccggctgcctcaaggagct 148
>dbj|AK106802.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-B12, full
insert sequence
Length = 1932
Score = 71.9 bits (36), Expect = 1e-009
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||||||||||||||||||
Sbjct: 1125 ctgcggccccggccacggcatcagcatcggcagcct 1160
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatc 745
||||||||||||||||||||||
Sbjct: 1065 cggcgacgactgcatctccatc 1086
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0576F08
Length = 135314
Score = 71.9 bits (36), Expect = 1e-009
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||||||||||||||||||
Sbjct: 134380 ctgcggccccggccacggcatcagcatcggcagcct 134345
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 724 cggcgacgactgcatctccatc 745
||||||||||||||||||||||
Sbjct: 134440 cggcgacgactgcatctccatc 134419
>ref|XM_463996.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1932
Score = 71.9 bits (36), Expect = 1e-009
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||||||||||||||||||
Sbjct: 1125 ctgcggccccggccacggcatcagcatcggcagcct 1160
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatc 745
||||||||||||||||||||||
Sbjct: 1065 cggcgacgactgcatctccatc 1086
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1007_D04
Length = 125503
Score = 71.9 bits (36), Expect = 1e-009
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||||||||||||||||||
Sbjct: 8062 ctgcggccccggccacggcatcagcatcggcagcct 8027
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 724 cggcgacgactgcatctccatc 745
||||||||||||||||||||||
Sbjct: 8122 cggcgacgactgcatctccatc 8101
>ref|NT_107175.1| Oryza sativa (japonica cultivar-group)
Length = 2882457
Score = 71.9 bits (36), Expect = 1e-009
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||||||||||||||||||
Sbjct: 1570959 ctgcggccccggccacggcatcagcatcggcagcct 1570924
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 724 cggcgacgactgcatctccatc 745
||||||||||||||||||||||
Sbjct: 1571019 cggcgacgactgcatctccatc 1570998
>dbj|AK103106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O22, full
insert sequence
Length = 1594
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 629 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 688
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 689 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 748
Query: 760 caa 762
|||
Sbjct: 749 caa 751
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 773 ctgcggccccggccacggcataagcatcgggagcct 808
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0501G01
Length = 154561
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 120302 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 120243
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 120242 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 120183
Query: 760 caa 762
|||
Sbjct: 120182 caa 120180
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 120158 ctgcggccccggccacggcataagcatcgggagcct 120123
>gb|AACV01001867.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001867, whole
genome shotgun sequence
Length = 63761
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 10651 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 10592
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 10591 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 10532
Query: 760 caa 762
|||
Sbjct: 10531 caa 10529
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 10507 ctgcggccccggccacggcataagcatcgggagcct 10472
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 24975899 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 24975840
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 24975839 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 24975780
Query: 760 caa 762
|||
Sbjct: 24975779 caa 24975777
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 18428036 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 18427985
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
|||||||||||||||| || | ||||||||||||| ||||||||||| |||| ||
Sbjct: 10827006 catcaccaacaccgtcgtctccaacggcgacgactgcgtctccatcggcgccggcacgct 10827065
Query: 760 caaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcct 819
||| || ||||| ||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 10827066 caacgtccacatcgagaacgtcacctgcgggcccgggcacggcatcagcatcggcagcct 10827125
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 24975755 ctgcggccccggccacggcataagcatcgggagcct 24975720
Score = 52.0 bits (26), Expect = 0.001
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 522 tggtgatggacttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagt 581
||||| |||||| |||||| |||||| ||||| ||| ||| |||| | ||| ||||||
Sbjct: 18428593 tggtgctggactacgtgaagaacgggaccgtgtcggggctcaagctggtgaacgccaagt 18428534
Query: 582 tcttccacatgaacatgtacaagtgcaagg 611
|||||||||| ||| |||||| || |||||
Sbjct: 18428533 tcttccacatcaacgtgtacatgtccaagg 18428504
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 18428227 ccaacggcgtccggatcaagtcgtatgaggacg 18428195
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 18427924 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 18427876
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 18428464 acagcccgaacacggacggtgtccacatcggcgactcgtc 18428425
Score = 46.1 bits (23), Expect = 0.057
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 785 tgcggccccggccacggcatcag 807
|||||||||||||||||||||||
Sbjct: 38823768 tgcggccccggccacggcatcag 38823790
Score = 46.1 bits (23), Expect = 0.057
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaa 762
||||||||||||| ||||| |||||||||| | ||||||
Sbjct: 38823707 cggcgacgactgcgtctccgtcggccccggcaactccaa 38823745
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 793 cggccacggcatcagcatcggcagcct 819
|||||||||||||||||||||| ||||
Sbjct: 12684495 cggccacggcatcagcatcggcggcct 12684521
>ref|NM_192870.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1203
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 573 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 632
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 633 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 692
Query: 760 caa 762
|||
Sbjct: 693 caa 695
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 717 ctgcggccccggccacggcataagcatcgggagcct 752
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 7894131 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 7894072
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 7894071 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 7894012
Query: 760 caa 762
|||
Sbjct: 7894011 caa 7894009
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 1346268 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 1346217
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 7893987 ctgcggccccggccacggcataagcatcgggagcct 7893952
Score = 52.0 bits (26), Expect = 0.001
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 522 tggtgatggacttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagt 581
||||| |||||| |||||| |||||| ||||| ||| ||| |||| | ||| ||||||
Sbjct: 1346825 tggtgctggactacgtgaagaacgggaccgtgtcggggctcaagctggtgaacgccaagt 1346766
Query: 582 tcttccacatgaacatgtacaagtgcaagg 611
|||||||||| ||| |||||| || |||||
Sbjct: 1346765 tcttccacatcaacgtgtacatgtccaagg 1346736
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 1346459 ccaacggcgtccggatcaagtcgtatgaggacg 1346427
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 1346156 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 1346108
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1346696 acagcccgaacacggacggtgtccacatcggcgactcgtc 1346657
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 7888881 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 7888822
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 7888821 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 7888762
Query: 760 caa 762
|||
Sbjct: 7888761 caa 7888759
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 1383256 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 1383205
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 7888737 ctgcggccccggccacggcataagcatcgggagcct 7888702
Score = 52.0 bits (26), Expect = 0.001
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 522 tggtgatggacttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagt 581
||||| |||||| |||||| |||||| ||||| ||| ||| |||| | ||| ||||||
Sbjct: 1383813 tggtgctggactacgtgaagaacgggaccgtgtcggggctcaagctggtgaacgccaagt 1383754
Query: 582 tcttccacatgaacatgtacaagtgcaagg 611
|||||||||| ||| |||||| || |||||
Sbjct: 1383753 tcttccacatcaacgtgtacatgtccaagg 1383724
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 1383447 ccaacggcgtccggatcaagtcgtatgaggacg 1383415
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 1383144 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 1383096
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1383684 acagcccgaacacggacggtgtccacatcggcgactcgtc 1383645
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 24514004 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 24513945
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 24513944 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 24513885
Query: 760 caa 762
|||
Sbjct: 24513884 caa 24513882
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 18008379 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 18008328
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
|||||||||||||||| || | ||||||||||||| ||||||||||| |||| ||
Sbjct: 11043211 catcaccaacaccgtcgtctccaacggcgacgactgcgtctccatcggcgccggcacgct 11043270
Query: 760 caaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcct 819
||| || ||||| ||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 11043271 caacgtccacatcgagaacgtcacctgcgggcccgggcacggcatcagcatcggcagcct 11043330
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 24513860 ctgcggccccggccacggcataagcatcgggagcct 24513825
Score = 52.0 bits (26), Expect = 0.001
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 522 tggtgatggacttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagt 581
||||| |||||| |||||| |||||| ||||| ||| ||| |||| | ||| ||||||
Sbjct: 18008936 tggtgctggactacgtgaagaacgggaccgtgtcggggctcaagctggtgaacgccaagt 18008877
Query: 582 tcttccacatgaacatgtacaagtgcaagg 611
|||||||||| ||| |||||| || |||||
Sbjct: 18008876 tcttccacatcaacgtgtacatgtccaagg 18008847
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 18008570 ccaacggcgtccggatcaagtcgtatgaggacg 18008538
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 18008267 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 18008219
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 18008807 acagcccgaacacggacggtgtccacatcggcgactcgtc 18008768
Score = 46.1 bits (23), Expect = 0.057
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 785 tgcggccccggccacggcatcag 807
|||||||||||||||||||||||
Sbjct: 38203719 tgcggccccggccacggcatcag 38203741
Score = 46.1 bits (23), Expect = 0.057
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaa 762
||||||||||||| ||||| |||||||||| | ||||||
Sbjct: 38203658 cggcgacgactgcgtctccgtcggccccggcaactccaa 38203696
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 793 cggccacggcatcagcatcggcagcct 819
|||||||||||||||||||||| ||||
Sbjct: 12642488 cggccacggcatcagcatcggcggcct 12642514
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 69.9 bits (35), Expect = 4e-009
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 640 ggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcac 699
|||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 24897182 ggcgcccgggagcagccccaacacggacggcatccacgtgcagtcgtcgtccgcggtcac 24897123
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
||||||| | || |||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 24897122 catcaccggcgccagcatccagaccggcgacgactgcatctccgtcggccccggcacctc 24897063
Query: 760 caa 762
|||
Sbjct: 24897062 caa 24897060
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 18349319 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 18349268
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
|||||||||||||||| || | ||||||||||||| ||||||||||| |||| ||
Sbjct: 10829224 catcaccaacaccgtcgtctccaacggcgacgactgcgtctccatcggcgccggcacgct 10829283
Query: 760 caaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcct 819
||| || ||||| ||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 10829284 caacgtccacatcgagaacgtcacctgcgggcccgggcacggcatcagcatcggcagcct 10829343
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 784 ctgcggccccggccacggcatcagcatcggcagcct 819
||||||||||||||||||||| |||||||| |||||
Sbjct: 24897038 ctgcggccccggccacggcataagcatcgggagcct 24897003
Score = 52.0 bits (26), Expect = 0.001
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 522 tggtgatggacttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagt 581
||||| |||||| |||||| |||||| ||||| ||| ||| |||| | ||| ||||||
Sbjct: 18349876 tggtgctggactacgtgaagaacgggaccgtgtcggggctcaagctggtgaacgccaagt 18349817
Query: 582 tcttccacatgaacatgtacaagtgcaagg 611
|||||||||| ||| |||||| || |||||
Sbjct: 18349816 tcttccacatcaacgtgtacatgtccaagg 18349787
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 18349510 ccaacggcgtccggatcaagtcgtatgaggacg 18349478
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 18349207 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 18349159
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 18349747 acagcccgaacacggacggtgtccacatcggcgactcgtc 18349708
Score = 46.1 bits (23), Expect = 0.057
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 785 tgcggccccggccacggcatcag 807
|||||||||||||||||||||||
Sbjct: 38743098 tgcggccccggccacggcatcag 38743120
Score = 46.1 bits (23), Expect = 0.057
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaa 762
||||||||||||| ||||| |||||||||| | ||||||
Sbjct: 38743037 cggcgacgactgcgtctccgtcggccccggcaactccaa 38743075
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 793 cggccacggcatcagcatcggcagcct 819
|||||||||||||||||||||| ||||
Sbjct: 12686713 cggccacggcatcagcatcggcggcct 12686739
>gb|AQ690710.1|AQ690710 nbxb0082H20f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0082H20f, DNA sequence
Length = 759
Score = 65.9 bits (33), Expect = 6e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 228 cggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttc 280
||||||||| |||||||| |||||||||||| || |||||||||||||||||
Sbjct: 354 cggcgtgcgctggcaccggcaagcagacgatcgtcttccccaagggcgacttc 406
Score = 50.1 bits (25), Expect = 0.004
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||| ||||||| || | | ||||| |||||||||||| |||| | |||
Sbjct: 550 cggcaagggcaagatcgacggccanngcgccgccgtctggagcaagaacacctgtgccaa 609
Query: 490 gaagtacgactgcaagatccttcccaa 516
||| || ||||||||||||||||||
Sbjct: 610 gaaaaacatctgcaagatccttcccaa 636
>dbj|AK069989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037D20, full
insert sequence
Length = 1459
Score = 65.9 bits (33), Expect = 6e-008
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 495 acgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtgt 554
|||| ||||||||| | |||||| || ||||| |||||| |||||| |||||| ||||
Sbjct: 501 acgaatgcaagatcttgcccaacacgttggtgctggactacgtgaagaacgggaccgtgt 560
Query: 555 ccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaagg 611
| ||| ||| |||| | ||| |||||||||||||||| ||| |||||| || |||||
Sbjct: 561 cggggctcaagctggtgaacgccaagttcttccacatcaacgtgtacatgtccaagg 617
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 1085 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 1136
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 1197 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 1245
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 657 acagcccgaacacggacggtgtccacatcggcgactcgtc 696
>ref|XM_463287.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1212
Score = 65.9 bits (33), Expect = 6e-008
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 495 acgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtgt 554
|||| ||||||||| | |||||| || ||||| |||||| |||||| |||||| ||||
Sbjct: 440 acgaatgcaagatcttgcccaacacgttggtgctggactacgtgaagaacgggaccgtgt 499
Query: 555 ccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaagg 611
| ||| ||| |||| | ||| |||||||||||||||| ||| |||||| || |||||
Sbjct: 500 cggggctcaagctggtgaacgccaagttcttccacatcaacgtgtacatgtccaagg 556
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 1024 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 1075
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 1136 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 1184
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 833 ccaacggcgtccggatcaagtcgtatgaggacg 865
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 596 acagcccgaacacggacggtgtccacatcggcgactcgtc 635
>gb|AU094002.1|AU094002 AU094002 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1822, mRNA sequence
Length = 675
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 269 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 320
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 381 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 429
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 78 ccaacggcgtccggatcaagtcgtatgaggacg 110
>ref|NT_079878.2| Oryza sativa (japonica cultivar-group)
Length = 2996370
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 775 cggcgtgacctgcggccccggccacggcatcagcatcggc 814
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 845197 cggcgtcacctgcggcccgggccacggcatcagcatcggc 845236
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctcc 760
||||||||||||| |||||||||| |||||| |||||
Sbjct: 2702035 cggcgacgactgcgtctccatcgggcccgggtcctcc 2702071
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccac 676
|||||||| ||||||||||||||||||
Sbjct: 845072 gacagcccaaacacggacggcatccac 845098
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0040M10
Length = 162790
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 775 cggcgtgacctgcggccccggccacggcatcagcatcggc 814
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 17468 cggcgtcacctgcggcccgggccacggcatcagcatcggc 17507
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccac 676
|||||||| ||||||||||||||||||
Sbjct: 17343 gacagcccaaacacggacggcatccac 17369
>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0618D11
Length = 150103
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 775 cggcgtgacctgcggccccggccacggcatcagcatcggc 814
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 141404 cggcgtcacctgcggcccgggccacggcatcagcatcggc 141443
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 650 gacagccccaacacggacggcatccac 676
|||||||| ||||||||||||||||||
Sbjct: 141279 gacagcccaaacacggacggcatccac 141305
>gb|AACV01000807.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000807, whole
genome shotgun sequence
Length = 15948
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Minus
Query: 700 catcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctc 759
|||||||||||||||| || | ||||||||||||| ||||||||||| |||| ||
Sbjct: 14008 catcaccaacaccgtcgtctccaacggcgacgactgcgtctccatcggcgccggcacgct 13949
Query: 760 caaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcct 819
||| || ||||| ||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 13948 caacgtccacatcgagaacgtcacctgcgggcccgggcacggcatcagcatcggcagcct 13889
>gb|AACV01001330.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001330, whole
genome shotgun sequence
Length = 59730
Score = 63.9 bits (32), Expect = 2e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1076 aacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctg 1127
|||||||||||||||||| ||| ||||||||||||| ||| ||||||||||
Sbjct: 25041 aacatcaccggcacctccaacacgccggaggccgtcagcctactctgctctg 24990
Score = 52.0 bits (26), Expect = 0.001
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 522 tggtgatggacttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagt 581
||||| |||||| |||||| |||||| ||||| ||| ||| |||| | ||| ||||||
Sbjct: 25598 tggtgctggactacgtgaagaacgggaccgtgtcggggctcaagctggtgaacgccaagt 25539
Query: 582 tcttccacatgaacatgtacaagtgcaagg 611
|||||||||| ||| |||||| || |||||
Sbjct: 25538 tcttccacatcaacgtgtacatgtccaagg 25509
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacg 920
||||||||||||| |||||| ||||||||||||
Sbjct: 25232 ccaacggcgtccggatcaagtcgtatgaggacg 25200
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaaggg 1236
||||||||||||||||||| |||| ||||| ||||||| | |||||||
Sbjct: 24929 acaacaagaccatggccgtctgcaccaacgccaagggcatctccaaggg 24881
Score = 48.1 bits (24), Expect = 0.014
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 651 acagccccaacacggacggcatccacatgggcgactcgtc 690
||||||| ||||||||||| ||||||| |||||||||||
Sbjct: 25469 acagcccgaacacggacggtgtccacatcggcgactcgtc 25430
>gb|AACV01013994.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013994, whole
genome shotgun sequence
Length = 25239
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 775 cggcgtgacctgcggccccggccacggcatcagcatcggc 814
|||||| ||||||||||| |||||||||||||||||||||
Sbjct: 12438 cggcgtcacctgcggcccgggccacggcatcagcatcggc 12399
Score = 46.1 bits (23), Expect = 0.057
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 650 gacagccccaacacggacggcatccac 676
|||||||| ||||||||||||||||||
Sbjct: 12563 gacagcccaaacacggacggcatccac 12537
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,111,081
Number of Sequences: 438736
Number of extensions: 2111081
Number of successful extensions: 14773
Number of sequences better than 0.5: 111
Number of HSP's better than 0.5 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12912
Number of HSP's gapped (non-prelim): 1802
length of query: 1540
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1519
effective length of database: 2,791,206,460
effective search space: 4239842612740
effective search space used: 4239842612740
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)