BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521865.2.1
(638 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB647910.1|CB647910 OSJNEb11A19.r OSJNEb Oryza sativa (j... 351 3e-094
gb|CB648443.1|CB648443 OSJNEb11N06.r OSJNEb Oryza sativa (j... 351 3e-094
gb|CB649982.1|CB649982 OSJNEb14D07.r OSJNEb Oryza sativa (j... 351 3e-094
gb|CB653961.1|CB653961 OSJNEc05H12.r OSJNEc Oryza sativa (j... 351 3e-094
gb|CB656682.1|CB656682 OSJNEc11F02.r OSJNEc Oryza sativa (j... 351 3e-094
gb|CB669767.1|CB669767 OSJNEe02I01.f OSJNEe Oryza sativa (j... 351 3e-094
gb|CB674915.1|CB674915 OSJNEe10E05.r OSJNEe Oryza sativa (j... 351 3e-094
dbj|AK061976.1| Oryza sativa (japonica cultivar-group) cDNA... 351 3e-094
dbj|AK064779.1| Oryza sativa (japonica cultivar-group) cDNA... 351 3e-094
gb|AACV01017697.1| Oryza sativa (japonica cultivar-group) c... 351 3e-094
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 351 3e-094
ref|NM_190595.1| Oryza sativa (japonica cultivar-group), p... 351 3e-094
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 351 3e-094
dbj|AP004127.1| Oryza sativa (japonica cultivar-group) geno... 351 3e-094
dbj|AP003251.3| Oryza sativa (japonica cultivar-group) geno... 351 3e-094
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 351 3e-094
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 351 3e-094
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 351 3e-094
gb|CX056264.1|CX056264 B010802E01 Rice cold stress germinat... 347 5e-093
dbj|AK122126.1| Oryza sativa (japonica cultivar-group) cDNA... 343 7e-092
gb|CB648170.1|CB648170 OSJNEb11H03.r OSJNEb Oryza sativa (j... 335 2e-089
gb|CB648219.1|CB648219 OSJNEb11I04.r OSJNEb Oryza sativa (j... 335 2e-089
gb|CB660953.1|CB660953 OSJNEd03D08.r OSJNEd Oryza sativa (j... 335 2e-089
gb|CB662524.1|CB662524 OSJNEd06K08.f OSJNEd Oryza sativa (j... 335 2e-089
gb|CB662525.1|CB662525 OSJNEd06K08.r OSJNEd Oryza sativa (j... 335 2e-089
gb|CB665497.1|CB665497 OSJNEd11P11.r OSJNEd Oryza sativa (j... 335 2e-089
gb|CB672103.1|CB672103 OSJNEe05P12.r OSJNEe Oryza sativa (j... 335 2e-089
gb|CB672105.1|CB672105 OSJNEe05P13.r OSJNEe Oryza sativa (j... 335 2e-089
gb|CB674119.1|CB674119 OSJNEe09A09.r OSJNEe Oryza sativa (j... 335 2e-089
gb|CB674427.1|CB674427 OSJNEe09H13.r OSJNEe Oryza sativa (j... 335 2e-089
gb|CB675124.1|CB675124 OSJNEe10K07.r OSJNEe Oryza sativa (j... 335 2e-089
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 335 2e-089
gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) c... 335 2e-089
ref|XM_480870.1| Oryza sativa (japonica cultivar-group), mRNA 335 2e-089
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 335 2e-089
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 335 2e-089
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 335 2e-089
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 335 2e-089
gb|AU029642.1|AU029642 AU029642 Rice panicle shorter than 3... 307 4e-081
gb|CF318273.1|CF318273 HD--08-F10.g1 OsHDAC1-overexpressing... 283 6e-074
gb|AU198025.1|AU198025 AU198025 Rice green shoot Oryza sati... 246 1e-062
gb|CF318272.1|CF318272 HD--08-F10.b1 OsHDAC1-overexpressing... 208 3e-051
gb|CA999640.1|CA999640 S234K_B06 Rice cold stress germinati... 170 6e-040
gb|CF297706.1|CF297706 30DGS--08-L20.g1 Rice leaf plasmid c... 161 6e-037
dbj|AK121972.1| Oryza sativa (japonica cultivar-group) cDNA... 101 5e-019
gb|AC139168.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
gb|AC135209.2| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
gb|AACV01006289.1| Oryza sativa (japonica cultivar-group) c... 101 5e-019
ref|NM_187480.1| Oryza sativa (japonica cultivar-group), p... 101 5e-019
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 101 5e-019
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 101 5e-019
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 101 5e-019
gb|CB648442.1|CB648442 OSJNEb11N06.f OSJNEb Oryza sativa (j... 94 1e-016
gb|CF196130.1|CF196130 Azvi1.1_F05 AZ-VI Oryza sativa (japo... 44 0.091
>gb|CB647910.1|CB647910 OSJNEb11A19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11A19 3', mRNA sequence
Length = 745
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 656 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 597
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 596 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 537
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 536 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 477
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 476 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 417
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 416 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 357
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 356 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 304
>gb|CB648443.1|CB648443 OSJNEb11N06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11N06 3', mRNA sequence
Length = 815
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 696 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 637
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 636 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 577
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 576 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 517
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 516 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 457
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 456 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 397
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 396 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 344
>gb|CB649982.1|CB649982 OSJNEb14D07.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14D07 3', mRNA sequence
Length = 720
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 638 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 579
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 578 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 519
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 518 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 459
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 458 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 399
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 398 ctatcctgggagaggacgtacatgtaggtgatgaggtttataccaacggcggtgttgttc 339
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 338 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 286
>gb|CB653961.1|CB653961 OSJNEc05H12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05H12 3', mRNA sequence
Length = 818
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 567 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 508
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 507 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 448
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 447 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 388
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 387 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 328
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 327 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 268
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 267 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 215
>gb|CB656682.1|CB656682 OSJNEc11F02.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F02 3', mRNA sequence
Length = 823
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 589 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 530
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 529 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 470
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 469 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 410
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 409 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 350
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 349 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 290
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 289 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 237
>gb|CB669767.1|CB669767 OSJNEe02I01.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02I01 5', mRNA sequence
Length = 825
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 743 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 684
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 683 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 624
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 623 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 564
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 563 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 504
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 503 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 444
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 443 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 391
>gb|CB674915.1|CB674915 OSJNEe10E05.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10E05 3', mRNA sequence
Length = 750
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 505 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 446
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 445 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 386
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 385 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 326
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 325 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 266
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 265 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 206
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 205 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 153
>dbj|AK061976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A03, full
insert sequence
Length = 1655
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 929 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 988
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 989 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 1048
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 1049 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 1108
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1109 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 1168
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 1169 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 1228
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1229 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 1281
>dbj|AK064779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B04, full
insert sequence
Length = 1479
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 930 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 989
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 990 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 1049
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 1050 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 1109
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1110 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 1169
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 1170 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 1229
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1230 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 1282
>gb|AACV01017697.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017697, whole
genome shotgun sequence
Length = 39221
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 19820 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 19761
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 19760 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 19701
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 19700 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 19641
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 19640 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 19581
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 19580 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 19521
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 19520 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 19468
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 36471234 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 36471293
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 36471294 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 36471353
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 36471354 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 36471413
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 36471414 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 36471473
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 36471474 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 36471533
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 36471534 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 36471586
>ref|NM_190595.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1086
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 734 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 793
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 794 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 853
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 854 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 913
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 914 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 973
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 974 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 1033
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1034 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 1086
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 10918617 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 10918676
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 10918677 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 10918736
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 10918737 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 10918796
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 10918797 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 10918856
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 10918857 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 10918916
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 10918917 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 10918969
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0005H10
Length = 142885
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 42403 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 42462
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 42463 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 42522
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 42523 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 42582
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 42583 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 42642
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 42643 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 42702
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 42703 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 42755
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0446B05
Length = 149145
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 140441 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 140500
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 140501 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 140560
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 140561 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 140620
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 140621 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 140680
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 140681 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 140740
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 140741 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 140793
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067
genomic scaffold, whole genome shotgun sequence
Length = 19501165
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 181362 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 181303
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 181302 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 181243
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 181242 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 181183
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 181182 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 181123
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 181122 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 181063
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 181062 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 181010
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 7783368 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 7783309
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 7783308 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 7783249
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 7783248 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 7783189
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 7783188 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 7783129
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 7783128 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 7783069
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 7783068 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 7783016
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 351 bits (177), Expect = 3e-094
Identities = 309/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 36390564 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 36390623
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 36390624 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 36390683
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 36390684 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 36390743
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 36390744 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 36390803
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 36390804 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 36390863
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 36390864 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 36390916
>gb|CX056264.1|CX056264 B010802E01 Rice cold stress germination cDNA-AFLP Oryza sativa
(japonica cultivar-group) cDNA clone B010802E01 5'
similar to Putative GDP-mannose pyrophosphorylase [O.
sativa], mRNA sequence
Length = 419
Score = 347 bits (175), Expect = 5e-093
Identities = 307/351 (87%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 351 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 292
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct: 291 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtg 232
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 231 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 172
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 171 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 112
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 111 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 52
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgt 353
|||| || |||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 51 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgt 1
>dbj|AK122126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132D02, full
insert sequence
Length = 1708
Score = 343 bits (173), Expect = 7e-092
Identities = 308/353 (87%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 1044 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 1103
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || || || ||||| || || |||||| | || |
Sbjct: 1104 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggagaatggtg 1163
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||| || ||||||||||||||||| |
Sbjct: 1164 tgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatat 1223
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1224 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 1283
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
|||||||||| ||||| || ||||| |||||||||| || | ||| |||||||||||||
Sbjct: 1284 ctatcctgggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttgttc 1343
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1344 tcccgcacaaagagatcaagtcaagcatcctgaagcctgagattgtcatgtga 1396
>gb|CB648170.1|CB648170 OSJNEb11H03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11H03 3', mRNA sequence
Length = 773
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 552 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 493
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 492 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 433
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 432 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 373
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 372 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 313
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 312 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 253
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 252 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 200
>gb|CB648219.1|CB648219 OSJNEb11I04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11I04 3', mRNA sequence
Length = 801
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 558 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 499
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 498 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 439
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 438 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 379
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 378 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 319
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 318 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 259
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 258 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 206
>gb|CB660953.1|CB660953 OSJNEd03D08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd03D08 3', mRNA sequence
Length = 715
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 449 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 390
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 389 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 330
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 329 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 270
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 269 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 210
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 209 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 150
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 149 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 97
>gb|CB662524.1|CB662524 OSJNEd06K08.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06K08 5', mRNA sequence
Length = 859
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 519 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 460
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 459 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 400
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 399 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 340
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 339 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 280
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 279 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 220
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 219 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 167
>gb|CB662525.1|CB662525 OSJNEd06K08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06K08 3', mRNA sequence
Length = 825
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 519 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 460
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 459 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 400
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 399 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 340
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 339 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 280
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 279 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 220
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 219 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 167
>gb|CB665497.1|CB665497 OSJNEd11P11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11P11 3', mRNA sequence
Length = 815
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 507 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 448
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 447 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 388
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 387 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 328
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 327 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 268
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 267 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 208
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 207 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 155
>gb|CB672103.1|CB672103 OSJNEe05P12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05P12 3', mRNA sequence
Length = 818
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 558 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 499
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 498 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 439
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 438 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 379
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 378 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 319
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 318 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 259
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 258 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 206
>gb|CB672105.1|CB672105 OSJNEe05P13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05P13 3', mRNA sequence
Length = 827
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 557 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 498
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 497 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 438
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 437 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 378
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 377 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 318
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 317 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 258
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 257 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 205
>gb|CB674119.1|CB674119 OSJNEe09A09.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09A09 3', mRNA sequence
Length = 804
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 562 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 503
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 502 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 443
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 442 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 383
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 382 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 323
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 322 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 263
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 262 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 210
>gb|CB674427.1|CB674427 OSJNEe09H13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09H13 3', mRNA sequence
Length = 916
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 577 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 518
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 517 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 458
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 457 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 398
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 397 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 338
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 337 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 278
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 277 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 225
>gb|CB675124.1|CB675124 OSJNEe10K07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10K07 3', mRNA sequence
Length = 823
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 515 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 456
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 455 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 396
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 395 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 336
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 335 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 276
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 275 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 216
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 215 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 163
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0682A06
Length = 142023
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 76526 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 76467
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 76466 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 76407
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 76406 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 76347
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 76346 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 76287
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 76286 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 76227
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 76226 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 76174
>gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002670, whole
genome shotgun sequence
Length = 40539
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 20135 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 20076
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 20075 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 20016
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 20015 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 19956
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 19955 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 19896
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 19895 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 19836
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 19835 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 19783
>ref|XM_480870.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1086
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 734 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 793
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 794 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 853
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 854 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 913
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 914 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 973
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 974 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 1033
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 1034 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 1086
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 8103943 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 8103884
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 8103883 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 8103824
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 8103823 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 8103764
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 8103763 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 8103704
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 8103703 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 8103644
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 8103643 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 8103591
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 10671060 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 10671119
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 10671120 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 10671179
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 10671180 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 10671239
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 10671240 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 10671299
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 10671300 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 10671359
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 10671360 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 10671412
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 35872781 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 35872840
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 35872841 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 35872900
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 35872901 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 35872960
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 35872961 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 35873020
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 35873021 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 35873080
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 35873081 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 35873133
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 335 bits (169), Expect = 2e-089
Identities = 307/353 (86%)
Strand = Plus / Minus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 8336417 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 8336358
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcg 122
|||| |||||||||||||||||||| || ||||| ||||| || || |||||||| || |
Sbjct: 8336357 aaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtggaggatggtg 8336298
Query: 123 tgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatct 182
||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 8336297 tgaggctttcccgttgcacggtgatgcgtggcgtgcgtattaagaagcatgcttgcatat 8336238
Query: 183 caaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatga 242
||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 8336237 caaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatatga 8336178
Query: 243 ctatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttc 302
||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |||
Sbjct: 8336177 ctatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttattc 8336118
Query: 303 tcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 8336117 tcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 8336065
>gb|AU029642.1|AU029642 AU029642 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31176_6Z, mRNA sequence
Length = 665
Score = 307 bits (155), Expect = 4e-081
Identities = 307/355 (86%), Gaps = 2/355 (0%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| || |||||||| |
Sbjct: 217 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgcgaagattggcg 276
Query: 63 aaggttgtctgattggtcc-tgatgtcgccattggacctgggtgtgttgtggaggacggc 121
|||| |||||||||||||| |||||| || ||||| ||||| || || |||||||| ||
Sbjct: 277 aaggctgtctgattggtccctgatgttgctattggtcctggatgcgtcgtggaggatggt 336
Query: 122 gtgaggctttcccgctgcactgtcatgcgcggc-gtgcgtatcaagaagcatgcttgcat 180
|||||||||||||| ||||| || ||||| ||| |||||||| |||||||||||||||||
Sbjct: 337 gtgaggctttcccgttgcacggtgatgcgtggccgtgcgtattaagaagcatgcttgcat 396
Query: 181 ctcaaacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatat 240
|||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 397 atcaaacagcattattggatggcactcaactgttggacaatgggcacggatagaaaatat 456
Query: 241 gactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgt 300
||||||||| || ||||| || ||||| |||||||||| || | ||| ||||||||| |
Sbjct: 457 gactatcctaggagaggacgtacatgtaggtgatgaggtctataccaacggcggtgttat 516
Query: 301 tctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||| || ||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 517 tctcccgcacaaagagatcaaatcaagcatcctgaaacctgagattgtcatgtga 571
>gb|CF318273.1|CF318273 HD--08-F10.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-F10, mRNA sequence
Length = 683
Score = 283 bits (143), Expect = 6e-074
Identities = 248/283 (87%)
Strand = Plus / Minus
Query: 73 gattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcgtgaggctttc 132
||||||||||||||| || || || ||||| || || |||||||| || |||||||||||
Sbjct: 683 gattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtgtgaggctttc 624
Query: 133 ccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagcat 192
||| ||||| || ||||| ||||||| || ||||||||||||||||| |||||||||||
Sbjct: 623 ccgttgcacggtgatgcgtggcgtgcacattaagaagcatgcttgcatatcaaacagcat 564
Query: 193 tatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctggg 252
||| || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 563 tattggatggcactcaactgttggacaatgggcacggatagaaaatatgactatcctggg 504
Query: 253 ggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataa 312
||||| || ||||| |||||||||| || | ||| |||||||||||| |||| || ||
Sbjct: 503 agaggacgtacatgtaggtgatgaggtttataccaacggcggtgttgttttcccgcacaa 444
Query: 313 agagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 443 agagatcaagtcaagcatcctgaagcctgagattgtcatgtga 401
>gb|AU198025.1|AU198025 AU198025 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15059, mRNA sequence
Length = 411
Score = 246 bits (124), Expect = 1e-062
Identities = 256/303 (84%)
Strand = Plus / Plus
Query: 53 aagattggagaaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtg 112
|||||||| ||||| |||||||||||||||||||| || ||||| ||||| || || |||
Sbjct: 9 aagattggcgaaggctgtctgattggtcctgatgttgctattggtcctggatgcgtcgtg 68
Query: 113 gaggacggcgtgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcat 172
||||| || |||||||||||||| ||| | || ||||| ||||||||||| || ||||||
Sbjct: 69 gaggatggtgtgaggctttcccgttgcncggtgatgcgtggcgtgcgtattaaaaagcat 128
Query: 173 gcttgcatctcaaacagcattatcggctggcactcaactgttggtcaatgggcacggata 232
|||||||| |||||||||||||| || |||| |||||||||||| |||||||| ||||||
Sbjct: 129 gcttgcatatcaaacagcattattggatggcnctcaactgttggacaatgggcccggata 188
Query: 233 gagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggc 292
|| |||||||||||||| || ||||| || ||||| ||||| |||| || | ||| |||
Sbjct: 189 gaaaatatgactatcctaggagaggacgtacatgtaggtgatnaggtntataccaacggc 248
Query: 293 ggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatg 352
|||||| || | || | ||| ||||||| |||||||| || || |||||||| ||||||
Sbjct: 249 ggtgttattntnccgcncaaanagatcaaatcaagcatcctnaaacctgagattgtcatg 308
Query: 353 tga 355
|||
Sbjct: 309 tga 311
>gb|CF318272.1|CF318272 HD--08-F10.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-F10, mRNA sequence
Length = 485
Score = 208 bits (105), Expect = 3e-051
Identities = 219/253 (86%), Gaps = 3/253 (1%)
Strand = Plus / Plus
Query: 3 tagctactggagcacatgttgttggcaatgtgctggtgcatgagagcgccaagattggag 62
|||| ||||||||||| ||||||| |||||||| || || ||||| ||||||||||| |
Sbjct: 232 tagccactggagcacacattgttgggaatgtgctagttcacgagagtgccaagattggcg 291
Query: 63 aaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacgg-c 121
|||| |||||||||||||||||||| || || || ||||| || || |||||||| ||
Sbjct: 292 aaggctgtctgattggtcctgatgttgctatcggtcctggatgcgtcgtggaggatggtt 351
Query: 122 gtgaggctttcccgctgcactgtcatgcg-cggcgtgcgtatcaagaagcatgcttgcat 180
|||||||||||||| ||||| || ||||| ||||||| || |||||||||||||||||
Sbjct: 352 gtgaggctttcccgttgcacggtgatgcgtgggcgtgcacattaagaagcatgcttgcat 411
Query: 181 ctcaaacagcatta-tcggctggcactcaactgttggtcaatgggcacggatagagaata 239
||||||||||||| | || ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 412 atcaaacagcattattgggatggcactcaactgttggacaatgggcacggatagaaaata 471
Query: 240 tgactatcctggg 252
|||||||||||||
Sbjct: 472 tgactatcctggg 484
>gb|CA999640.1|CA999640 S234K_B06 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 154
Score = 170 bits (86), Expect = 6e-040
Identities = 128/142 (90%)
Strand = Plus / Plus
Query: 110 gtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaag 169
|||||||| || |||||||||||||| ||||| || ||||| ||||||| || ||||||
Sbjct: 13 gtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtgcacattaagaag 72
Query: 170 catgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaatgggcacgg 229
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 73 catgcttgcatatcaaacagcattattggatggcactcaactgttggacaatgggcacgg 132
Query: 230 atagagaatatgactatcctgg 251
||||| ||||||||||||||||
Sbjct: 133 atagaaaatatgactatcctgg 154
>gb|CF297706.1|CF297706 30DGS--08-L20.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--08-L20, mRNA sequence
Length = 340
Score = 161 bits (81), Expect = 6e-037
Identities = 123/137 (89%)
Strand = Plus / Minus
Query: 219 aatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgagg 278
|||||||||||||||| ||||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 340 aatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgagg 281
Query: 279 tgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagc 338
| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 280 tctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaagc 221
Query: 339 ctgagatcgtcatgtga 355
||||||| |||||||||
Sbjct: 220 ctgagattgtcatgtga 204
>dbj|AK121972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108I03, full
insert sequence
Length = 1476
Score = 101 bits (51), Expect = 5e-019
Identities = 231/291 (79%)
Strand = Plus / Plus
Query: 65 ggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcgtg 124
||||| ||||| || || || |||||| |||| || ||||| || ||||||| ||| |||
Sbjct: 984 ggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtg 1043
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
||||| ||||| ||||| || |||||||||| || |||||||||| || ||||||||
Sbjct: 1044 aggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctcc 1103
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| |||||||| || || || ||||| || | ||||| |||||
Sbjct: 1104 agcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgacc 1163
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || ||||| || || || || || ||||| |||||||| ||||| || || |||
Sbjct: 1164 atcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctc 1223
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| || || ||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 1224 ccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtga 1274
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
complete sequence
Length = 126027
Score = 101 bits (51), Expect = 5e-019
Identities = 231/291 (79%)
Strand = Plus / Minus
Query: 65 ggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcgtg 124
||||| ||||| || || || |||||| |||| || ||||| || ||||||| ||| |||
Sbjct: 72955 ggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtg 72896
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
||||| ||||| ||||| || |||||||||| || |||||||||| || ||||||||
Sbjct: 72895 aggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctcc 72836
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| |||||||| || || || ||||| || | ||||| |||||
Sbjct: 72835 agcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgacc 72776
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || ||||| || || || || || ||||| |||||||| ||||| || || |||
Sbjct: 72775 atcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctc 72716
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| || || ||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 72715 ccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtga 72665
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0071M09, complete sequence
Length = 143595
Score = 101 bits (51), Expect = 5e-019
Identities = 231/291 (79%)
Strand = Plus / Minus
Query: 65 ggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcgtg 124
||||| ||||| || || || |||||| |||| || ||||| || ||||||| ||| |||
Sbjct: 6928 ggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtg 6869
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
||||| ||||| ||||| || |||||||||| || |||||||||| || ||||||||
Sbjct: 6868 aggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctcc 6809
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| |||||||| || || || ||||| || | ||||| |||||
Sbjct: 6808 agcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgacc 6749
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || ||||| || || || || || ||||| |||||||| ||||| || || |||
Sbjct: 6748 atcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctc 6689
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| || || ||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 6688 ccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtga 6638
>gb|AACV01006289.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006289, whole
genome shotgun sequence
Length = 25280
Score = 101 bits (51), Expect = 5e-019
Identities = 231/291 (79%)
Strand = Plus / Plus
Query: 65 ggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcgtg 124
||||| ||||| || || || |||||| |||| || ||||| || ||||||| ||| |||
Sbjct: 19127 ggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtg 19186
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
||||| ||||| ||||| || |||||||||| || |||||||||| || ||||||||
Sbjct: 19187 aggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctcc 19246
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| |||||||| || || || ||||| || | ||||| |||||
Sbjct: 19247 agcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgacc 19306
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || ||||| || || || || || ||||| |||||||| ||||| || || |||
Sbjct: 19307 atcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctc 19366
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| || || ||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 19367 ccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtga 19417
>ref|NM_187480.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1086
Score = 101 bits (51), Expect = 5e-019
Identities = 231/291 (79%)
Strand = Plus / Plus
Query: 65 ggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcgtg 124
||||| ||||| || || || |||||| |||| || ||||| || ||||||| ||| |||
Sbjct: 796 ggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtg 855
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
||||| ||||| ||||| || |||||||||| || |||||||||| || ||||||||
Sbjct: 856 aggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctcc 915
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| |||||||| || || || ||||| || | ||||| |||||
Sbjct: 916 agcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgacc 975
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || ||||| || || || || || ||||| |||||||| ||||| || || |||
Sbjct: 976 atcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctc 1035
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| || || ||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 1036 ccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtga 1086
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 101 bits (51), Expect = 5e-019
Identities = 231/291 (79%)
Strand = Plus / Minus
Query: 65 ggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtggaggacggcgtg 124
||||| ||||| || || || |||||| |||| || ||||| || ||||||| ||| |||
Sbjct: 225718 ggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtg 225659
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
||||| ||||| ||||| || |||||||||| || |||||||||| || ||||||||
Sbjct: 225658 aggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctcc 225599
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| |||||||| || || || ||||| || | ||||| |||||
Sbjct: 225598 agcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgacc 225539
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || ||||| || || || || || ||||| |||||||| ||||| || || |||
Sbjct: 225538 atcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctc 225479
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| || || ||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 225478 ccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtga 225428
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 932,587
Number of Sequences: 438736
Number of extensions: 932587
Number of successful extensions: 4208
Number of sequences better than 0.5: 56
Number of HSP's better than 0.5 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4052
Number of HSP's gapped (non-prelim): 151
length of query: 638
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 617
effective length of database: 2,791,206,460
effective search space: 1722174385820
effective search space used: 1722174385820
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)