BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521686.2.1
(2104 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_196400.1| Oryza sativa (japonica cultivar-group) put... 1193 0.0
dbj|AB096259.1| Oryza sativa (japonica cultivar-group) PLA1... 1185 0.0
gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbar... 658 0.0
ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chr... 658 0.0
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 658 0.0
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 658 0.0
gb|AACV01025745.1| Oryza sativa (japonica cultivar-group) C... 541 e-151
gb|CH401311.1| Oryza sativa (japonica cultivar-group) scaff... 541 e-151
gb|CB657899.1|CB657899 OSJNEc13I24.f OSJNEc Oryza sativa (j... 86 9e-014
dbj|AK072163.1| Oryza sativa (japonica cultivar-group) cDNA... 86 9e-014
dbj|AP004704.3| Oryza sativa (japonica cultivar-group) geno... 86 9e-014
ref|XM_483643.1| Oryza sativa (japonica cultivar-group), mRNA 86 9e-014
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 86 9e-014
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 86 9e-014
gb|CB673949.1|CB673949 OSJNEe08M02.f OSJNEe Oryza sativa (j... 78 2e-011
gb|AACV01016741.1| Oryza sativa (japonica cultivar-group) c... 72 1e-009
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 72 1e-009
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 72 1e-009
gb|CB655569.1|CB655569 OSJNEc09C03.f OSJNEc Oryza sativa (j... 70 5e-009
dbj|AP005682.2| Oryza sativa (japonica cultivar-group) geno... 70 5e-009
gb|AACV01020435.1| Oryza sativa (japonica cultivar-group) c... 70 5e-009
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 70 5e-009
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 70 5e-009
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 70 5e-009
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 70 5e-009
gb|CA754722.1|CA754722 BR030005000_PLATE_G07_55_055.ab1 OA ... 66 8e-008
dbj|AK100598.1| Oryza sativa (japonica cultivar-group) cDNA... 66 8e-008
dbj|AK104994.2| Oryza sativa (japonica cultivar-group) cDNA... 66 8e-008
gb|AACV01011747.1| Oryza sativa (japonica cultivar-group) c... 66 8e-008
gb|AC136224.2| Oryza sativa (japonica cultivar-group) chrom... 66 8e-008
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 66 8e-008
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 66 8e-008
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 66 8e-008
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 66 8e-008
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
dbj|AP005809.4| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
ref|XM_479078.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-007
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 64 3e-007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 ... 62 1e-006
gb|AACV01006918.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
ref|XM_468710.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-006
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 62 1e-006
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 gen... 60 5e-006
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 60 5e-006
gb|AC134348.2| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|AC135929.2| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|AACV01011951.1| Oryza sativa (japonica cultivar-group) c... 54 3e-004
gb|AACV01018962.1| Oryza sativa (japonica cultivar-group) c... 54 3e-004
ref|XM_475110.1| Oryza sativa (japonica cultivar-group), p... 54 3e-004
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 54 3e-004
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CH401205.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CB655570.1|CB655570 OSJNEc09C03.r OSJNEc Oryza sativa (j... 52 0.001
gb|CB657900.1|CB657900 OSJNEc13I24.r OSJNEc Oryza sativa (j... 52 0.001
gb|CB673950.1|CB673950 OSJNEe08M02.r OSJNEe Oryza sativa (j... 52 0.001
gb|CA755419.1|CA755419 BR030020000_PLATE_C01_3_004.ab1 OA O... 50 0.005
gb|CV722587.1|CV722587 YTPSP--01-P06.b1 TPSP-overexpression... 50 0.005
dbj|AK120987.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.005
ref|NT_107128.1| Oryza sativa (japonica cultivar-group) 50 0.005
gb|AC136378.4| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|AC148759.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|AC109595.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|AACV01000500.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
gb|AACV01023114.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 50 0.005
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 50 0.005
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 50 0.005
ref|NM_188579.1| Oryza sativa (japonica cultivar-group), p... 50 0.005
ref|NM_188581.1| Oryza sativa (japonica cultivar-group), p... 50 0.005
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 50 0.005
dbj|AP003434.2| Oryza sativa (japonica cultivar-group) geno... 50 0.005
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromoso... 50 0.005
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 50 0.005
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 50 0.005
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 50 0.005
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
dbj|AK061017.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.078
dbj|AK062293.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.078
dbj|AK099111.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.078
gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 ... 46 0.078
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 46 0.078
dbj|AP003711.3| Oryza sativa (japonica cultivar-group) geno... 46 0.078
gb|AC132485.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.078
dbj|AP003575.2| Oryza sativa (japonica cultivar-group) geno... 46 0.078
gb|AACV01008293.1| Oryza sativa (japonica cultivar-group) c... 46 0.078
gb|AACV01012558.1| Oryza sativa (japonica cultivar-group) c... 46 0.078
gb|AACV01014544.1| Oryza sativa (japonica cultivar-group) c... 46 0.078
gb|AACV01019674.1| Oryza sativa (japonica cultivar-group) c... 46 0.078
ref|XM_470479.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.078
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 46 0.078
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 46 0.078
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 46 0.078
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 46 0.078
dbj|AP005091.3| Oryza sativa (japonica cultivar-group) geno... 46 0.078
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.078
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.078
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.078
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.078
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.078
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 46 0.078
gb|D41374.1|D41374 RICS3851A Rice shoot Oryza sativa (japon... 44 0.31
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AK064920.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.31
dbj|AK111468.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.31
dbj|AP005737.3| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AP004123.3| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 44 0.31
dbj|AP005252.5| Oryza sativa (japonica cultivar-group) geno... 44 0.31
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 44 0.31
dbj|AP003528.2| Oryza sativa (japonica cultivar-group) geno... 44 0.31
gb|AACV01013957.1| Oryza sativa (japonica cultivar-group) c... 44 0.31
gb|AACV01015029.1| Oryza sativa (japonica cultivar-group) c... 44 0.31
gb|AACV01016041.1| Oryza sativa (japonica cultivar-group) c... 44 0.31
ref|XM_476386.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.31
ref|XM_477917.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.31
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 44 0.31
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 44 0.31
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 44 0.31
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.31
gb|CH401213.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.31
emb|AL606689.4|OSJN00078 Oryza sativa genomic DNA, chromoso... 44 0.31
emb|BX842607.1|OSJN00296 Oryza sativa genomic DNA, chromoso... 44 0.31
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 44 0.31
>ref|NM_196400.1| Oryza sativa (japonica cultivar-group) putative cytochrome 450
(OSJNBa0044A10.17), mRNA
Length = 1668
Score = 1193 bits (602), Expect = 0.0
Identities = 1273/1494 (85%), Gaps = 12/1494 (0%)
Strand = Plus / Minus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 1650 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 1591
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 1590 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 1531
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 1530 ggcgacccagagggtgacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 1471
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 1470 ggcgccgaacggcgccaggcggaggtcgccgccgcggacgtcgacgtcggcgccgccctc 1411
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 1410 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 1351
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 1350 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 1291
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 1290 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 1231
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 1230 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 1171
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 1170 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 1111
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgtacc 1017
||||| | ||||| |||||||||||||||||| |||| | ||||||||||||||| ||
Sbjct: 1110 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgtccc 1051
Query: 1018 gcggaagaccatctcccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcacc 1077
|| || | |||||||||||||| ||||||||||||||| ||| |||| ||||||| |
Sbjct: 1050 acgaaatatcatctcccagaggacggcgaccatgtcgtcctcggcgaggttctcgtgggc 991
Query: 1078 ctcgagggagaggagcacgtcgacgaagtcagcattgtcgttgagggcggcggagttttg 1137
||||||||||||||| |||||||||||||| ||||||||| | || || |||| |
Sbjct: 990 ctcgagggagaggaggacgtcgacgaagtcggcattgtcggcggcggtggaggaggagtc 931
Query: 1138 gcggcggcgccggtgctcgtcgatgacgccacggacgaaggtctggacgcgcggcacgag 1197
||||||| | ||||| ||| ||||||||| |||||||| | ||||||||| || |||||
Sbjct: 930 gcggcggaggcggtggtcgcggatgacgccgcggacgaacgcctggacgcgggggacgag 871
Query: 1198 cgcggcgcaccggcgggtgacgttgcttgggtcgtacaggtgggcgagccaggggaggtg 1257
||||||||| ||||||| ||||| | | |||||||| |||||||||||||| ||||||||
Sbjct: 870 cgcggcgcagcggcgggcgacgtggttggggtcgtagaggtgggcgagccatgggaggtg 811
Query: 1258 gtcggaccagttgaaggcgccgaggagctcgaacccctcgcgcaccatgctcttgagatg 1317
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 810 gtcggaccagttgaacgcgccgaggagctcgaacccctcgcgcaccatgctcttgagctg 751
Query: 1318 ctcggcctccgcggcgccggcgcc------tgatgtgacgtcgtaccgcgtgccgaagac 1371
||||||||| ||||| ||||||| || | ||||||||| ||| |||||| ||
Sbjct: 750 ctcggcctcgtcggcggcggcgccggaggaggaggagacgtcgtagcgccggccgaacac 691
Query: 1372 gctgcccatgatgttgttgagagcggcggcctggaggtgcgggcggagggcgacggcgcc 1431
||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 690 gctgcccatgatgttgttgagcgcggcggcctggaggtgggggcggagcacgacggcgcc 631
Query: 1432 agaggccgactgttcggcggcgatggagcggagcatggcctccgcgtcaccttggcgtcc 1491
| ||| ||||| |||||||| |||| | ||||| ||| ||||| | ||||| ||
Sbjct: 630 ggtggcggactgctcggcggccatggcggacagcatcgccgtggcgtcggcctggcgccc 571
Query: 1492 cggctcgtgcgaggcgacccggcgcggggagaataggtgcgtggacgcgacgcggcggag 1551
||||||||||| |||||| ||||| |||||||| ||||| ||||| |||| |||||||||
Sbjct: 570 cggctcgtgcgcggcgacgcggcgaggggagaagaggtgggtggaggcgatgcggcggag 511
Query: 1552 gcggcgccagtactcgccgttgggcgcgaacccgatggcacgcgcgaacatgagctcccg 1611
| ||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||||
Sbjct: 510 gaggcgccagtactcgccgctgggggcgaacccgatggcgcgcgcgaacagcagctcccg 451
Query: 1612 ggccgaccgcttcacagggcggtcggcgaatgacgggtgcgcgagcacctcacgtgccgt 1671
||||| ||||||| |||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 450 cgccgagcgcttcagcgggcggtcggcgaacgacgggtgcgcgagcacctccctcgccgt 391
Query: 1672 ggccgggcaggacgacacgaccgcgggcgtgtcaccgacggagaacgccatgagctcctt 1731
|||||||| |||||||| ||||| ||||| || |||||||||||||||||||||||| |
Sbjct: 390 cgccgggcacgacgacaccaccgccggcgtctccccgacggagaacgccatgagctccct 331
Query: 1732 ggcccggggc----ctgcggcgcgggccatctcggcgagggcgcggtgcggca-gccccg 1786
||||| ||| | ||| |||| | |||| || |||| ||||||||||| | ||||||
Sbjct: 330 cgcccgtggcgccgccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcgggaggccccg 271
Query: 1787 ggacagcgcgaagatgctgccgaacacgggcagaccacggggtcccacgataggagtgac 1846
||| |||||||||||||||||||||||||| || || ||||| ||| |||| || || |
Sbjct: 270 ggagagcgcgaagatgctgccgaacacggggagcccccggggcccctcgatgggcgtcgc 211
Query: 1847 gccgaggc-gccgcggccgttcgtccacgccggaccgcccggcgacgtggccca 1899
|||||||| ||||||||||| || ||||||||| ||||| || |||| ||||||
Sbjct: 210 gccgaggcggccgcggccgtgcgcccacgccggcccgccgggggacgcggccca 157
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 104 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 45
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 44 gtggcgtc 37
>dbj|AB096259.1| Oryza sativa (japonica cultivar-group) PLA1 mRNA for cytochrome P450
78A11, complete cds
Length = 1668
Score = 1185 bits (598), Expect = 0.0
Identities = 1272/1494 (85%), Gaps = 12/1494 (0%)
Strand = Plus / Minus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 1650 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 1591
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 1590 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 1531
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 1530 ggcgacccagagggagacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 1471
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 1470 ggcgccgaacggcgccaggcggaggtcgccgtcgcggacgtcgacgtcggcgccgccctc 1411
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 1410 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 1351
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 1350 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 1291
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 1290 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 1231
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 1230 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 1171
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 1170 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 1111
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgtacc 1017
||||| | ||||| |||||||||||||||||| |||| | ||||||||||||||| ||
Sbjct: 1110 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgtccc 1051
Query: 1018 gcggaagaccatctcccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcacc 1077
|| || | |||||||||||||| ||||||||||||||| ||| |||| ||||||| |
Sbjct: 1050 acgaaatatcatctcccagaggacggcgaccatgtcgtcctcggcgaggttctcgtgggc 991
Query: 1078 ctcgagggagaggagcacgtcgacgaagtcagcattgtcgttgagggcggcggagttttg 1137
||||||||||||||| |||||||||||||| ||||||||| | || || |||| |
Sbjct: 990 ctcgagggagaggaggacgtcgacgaagtcggcattgtcggcggcggtggaggaggagtc 931
Query: 1138 gcggcggcgccggtgctcgtcgatgacgccacggacgaaggtctggacgcgcggcacgag 1197
||||||| | ||||| ||| ||||||||| |||||||| | ||||||||| || |||||
Sbjct: 930 gcggcggaggcggtggtcgcggatgacgccgcggacgaacgcctggacgcgggggacgag 871
Query: 1198 cgcggcgcaccggcgggtgacgttgcttgggtcgtacaggtgggcgagccaggggaggtg 1257
||||||||| ||||||| ||||| | | |||||||| |||||||||||||| ||||||||
Sbjct: 870 cgcggcgcagcggcgggcgacgtggttggggtcgtagaggtgggcgagccatgggaggtg 811
Query: 1258 gtcggaccagttgaaggcgccgaggagctcgaacccctcgcgcaccatgctcttgagatg 1317
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 810 gtcggaccagttgaacgcgccgaggagctcgaacccctcgcgcaccatgctcttgagctg 751
Query: 1318 ctcggcctccgcggcgccggcgcc------tgatgtgacgtcgtaccgcgtgccgaagac 1371
||||||||| ||||| ||||||| || | ||||||||| ||| |||||| ||
Sbjct: 750 ctcggcctcgtcggcggcggcgccggaggaggaggagacgtcgtagcgccggccgaacac 691
Query: 1372 gctgcccatgatgttgttgagagcggcggcctggaggtgcgggcggagggcgacggcgcc 1431
||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 690 gctgcccatgatgttgttgagcgcggcggcctggaggtgggggcggagcacgacggcgcc 631
Query: 1432 agaggccgactgttcggcggcgatggagcggagcatggcctccgcgtcaccttggcgtcc 1491
| ||| ||||| |||||||| |||| | ||||| ||| ||||| | ||||| ||
Sbjct: 630 ggtggcggactgctcggcggccatggcggacagcatcgccgtggcgtcggcctggcgccc 571
Query: 1492 cggctcgtgcgaggcgacccggcgcggggagaataggtgcgtggacgcgacgcggcggag 1551
||||||||||| |||||| ||||| |||||||| ||||| ||||| |||| |||||||||
Sbjct: 570 cggctcgtgcgcggcgacgcggcgaggggagaagaggtgggtggaggcgatgcggcggag 511
Query: 1552 gcggcgccagtactcgccgttgggcgcgaacccgatggcacgcgcgaacatgagctcccg 1611
| ||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||||
Sbjct: 510 gaggcgccagtactcgccgctgggggcgaacccgatggcgcgcgcgaacagcagctcccg 451
Query: 1612 ggccgaccgcttcacagggcggtcggcgaatgacgggtgcgcgagcacctcacgtgccgt 1671
||||| ||||||| |||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 450 cgccgagcgcttcagcgggcggtcggcgaacgacgggtgcgcgagcacctccctcgccgt 391
Query: 1672 ggccgggcaggacgacacgaccgcgggcgtgtcaccgacggagaacgccatgagctcctt 1731
|||||||| |||||||| ||||| ||||| || |||||||||||||||||||||||| |
Sbjct: 390 cgccgggcacgacgacaccaccgccggcgtctccccgacggagaacgccatgagctccct 331
Query: 1732 ggcccggggc----ctgcggcgcgggccatctcggcgagggcgcggtgcggca-gccccg 1786
||||| ||| | ||| |||| | |||| || |||| ||||||||||| | ||||||
Sbjct: 330 cgcccgtggcgccgccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcgggaggccccg 271
Query: 1787 ggacagcgcgaagatgctgccgaacacgggcagaccacggggtcccacgataggagtgac 1846
||| |||||||||||||||||||||||||| || || ||||| ||| |||| || || |
Sbjct: 270 ggagagcgcgaagatgctgccgaacacggggagcccccggggcccctcgatgggcgtcgc 211
Query: 1847 gccgaggc-gccgcggccgttcgtccacgccggaccgcccggcgacgtggccca 1899
|||||||| ||||||||||| || ||||||||| ||||| || |||| ||||||
Sbjct: 210 gccgaggcggccgcggccgtgcgcccacgccggcccgccgggggacgcggccca 157
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 104 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 45
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 44 gtggcgtc 37
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0044A10, from chromosome 10, complete sequence
Length = 169270
Score = 658 bits (332), Expect = 0.0
Identities = 745/880 (84%), Gaps = 12/880 (1%)
Strand = Plus / Plus
Query: 1032 cccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagagga 1091
||||||||| ||||||||||||||| ||| |||| ||||||| |||||||||||||||
Sbjct: 99722 cccagaggacggcgaccatgtcgtcctcggcgaggttctcgtgggcctcgagggagagga 99781
Query: 1092 gcacgtcgacgaagtcagcattgtcgttgagggcggcggagttttggcggcggcgccggt 1151
| |||||||||||||| ||||||||| | || || |||| | ||||||| | ||||
Sbjct: 99782 ggacgtcgacgaagtcggcattgtcggcggcggtggaggaggagtcgcggcggaggcggt 99841
Query: 1152 gctcgtcgatgacgccacggacgaaggtctggacgcgcggcacgagcgcggcgcaccggc 1211
| ||| ||||||||| |||||||| | ||||||||| || |||||||||||||| ||||
Sbjct: 99842 ggtcgcggatgacgccgcggacgaacgcctggacgcgggggacgagcgcggcgcagcggc 99901
Query: 1212 gggtgacgttgcttgggtcgtacaggtgggcgagccaggggaggtggtcggaccagttga 1271
||| ||||| | | |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 99902 gggcgacgtggttggggtcgtagaggtgggcgagccatgggaggtggtcggaccagttga 99961
Query: 1272 aggcgccgaggagctcgaacccctcgcgcaccatgctcttgagatgctcggcctccgcgg 1331
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 99962 acgcgccgaggagctcgaacccctcgcgcaccatgctcttgagctgctcggcctcgtcgg 100021
Query: 1332 cgccggcgcctgatgtg------acgtcgtaccgcgtgccgaagacgctgcccatgatgt 1385
|| ||||||| || | | |||||||| ||| |||||| ||||||||||||||||
Sbjct: 100022 cggcggcgccggaggaggaggagacgtcgtagcgccggccgaacacgctgcccatgatgt 100081
Query: 1386 tgttgagagcggcggcctggaggtgcgggcggagggcgacggcgccagaggccgactgtt 1445
||||||| ||||||||||||||||| |||||||| |||||||||| | ||| ||||| |
Sbjct: 100082 tgttgagcgcggcggcctggaggtgggggcggagcacgacggcgccggtggcggactgct 100141
Query: 1446 cggcggcgatggagcggagcatggcctccgcgtcaccttggcgtcccggctcgtgcgagg 1505
||||||| |||| | ||||| ||| ||||| | ||||| ||||||||||||| ||
Sbjct: 100142 cggcggccatggcggacagcatcgccgtggcgtcggcctggcgccccggctcgtgcgcgg 100201
Query: 1506 cgacccggcgcggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtact 1565
|||| ||||| |||||||| ||||| ||||| |||| |||||||||| ||||||||||||
Sbjct: 100202 cgacgcggcgaggggagaagaggtgggtggaggcgatgcggcggaggaggcgccagtact 100261
Query: 1566 cgccgttgggcgcgaacccgatggcacgcgcgaacatgagctcccgggccgaccgcttca 1625
||||| |||| |||||||||||||| |||||||||| |||||||| ||||| |||||||
Sbjct: 100262 cgccgctgggggcgaacccgatggcgcgcgcgaacagcagctcccgcgccgagcgcttca 100321
Query: 1626 cagggcggtcggcgaatgacgggtgcgcgagcacctcacgtgccgtggccgggcaggacg 1685
|||||||||||||| |||||||||||||||||||| | ||||| |||||||| ||||
Sbjct: 100322 gcgggcggtcggcgaacgacgggtgcgcgagcacctccctcgccgtcgccgggcacgacg 100381
Query: 1686 acacgaccgcgggcgtgtcaccgacggagaacgccatgagctccttggcccggggc---- 1741
|||| ||||| ||||| || |||||||||||||||||||||||| | ||||| |||
Sbjct: 100382 acaccaccgccggcgtctccccgacggagaacgccatgagctccctcgcccgtggcgccg 100441
Query: 1742 ctgcggcgcgggccatctcggcgagggcgcggtgcggca-gccccgggacagcgcgaaga 1800
| ||| |||| | |||| || |||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 100442 ccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcgggaggccccgggagagcgcgaaga 100501
Query: 1801 tgctgccgaacacgggcagaccacggggtcccacgataggagtgacgccgaggc-gccgc 1859
|||||||||||||||| || || ||||| ||| |||| || || ||||||||| |||||
Sbjct: 100502 tgctgccgaacacggggagcccccggggcccctcgatgggcgtcgcgccgaggcggccgc 100561
Query: 1860 ggccgttcgtccacgccggaccgcccggcgacgtggccca 1899
|||||| || ||||||||| ||||| || |||| ||||||
Sbjct: 100562 ggccgtgcgcccacgccggcccgccgggggacgcggccca 100601
Score = 541 bits (273), Expect = e-151
Identities = 516/597 (86%)
Strand = Plus / Plus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 99022 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 99081
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 99082 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 99141
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 99142 ggcgacccagagggtgacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 99201
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 99202 ggcgccgaacggcgccaggcggaggtcgccgccgcggacgtcgacgtcggcgccgccctc 99261
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 99262 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 99321
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 99322 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 99381
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 99382 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 99441
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 99442 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 99501
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 99502 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 99561
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgt 1014
||||| | ||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 99562 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgt 99618
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 100654 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 100713
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 100714 gtggcgtc 100721
>ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1531814
Score = 658 bits (332), Expect = 0.0
Identities = 745/880 (84%), Gaps = 12/880 (1%)
Strand = Plus / Plus
Query: 1032 cccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagagga 1091
||||||||| ||||||||||||||| ||| |||| ||||||| |||||||||||||||
Sbjct: 1462266 cccagaggacggcgaccatgtcgtcctcggcgaggttctcgtgggcctcgagggagagga 1462325
Query: 1092 gcacgtcgacgaagtcagcattgtcgttgagggcggcggagttttggcggcggcgccggt 1151
| |||||||||||||| ||||||||| | || || |||| | ||||||| | ||||
Sbjct: 1462326 ggacgtcgacgaagtcggcattgtcggcggcggtggaggaggagtcgcggcggaggcggt 1462385
Query: 1152 gctcgtcgatgacgccacggacgaaggtctggacgcgcggcacgagcgcggcgcaccggc 1211
| ||| ||||||||| |||||||| | ||||||||| || |||||||||||||| ||||
Sbjct: 1462386 ggtcgcggatgacgccgcggacgaacgcctggacgcgggggacgagcgcggcgcagcggc 1462445
Query: 1212 gggtgacgttgcttgggtcgtacaggtgggcgagccaggggaggtggtcggaccagttga 1271
||| ||||| | | |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 1462446 gggcgacgtggttggggtcgtagaggtgggcgagccatgggaggtggtcggaccagttga 1462505
Query: 1272 aggcgccgaggagctcgaacccctcgcgcaccatgctcttgagatgctcggcctccgcgg 1331
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1462506 acgcgccgaggagctcgaacccctcgcgcaccatgctcttgagctgctcggcctcgtcgg 1462565
Query: 1332 cgccggcgcctgatgtg------acgtcgtaccgcgtgccgaagacgctgcccatgatgt 1385
|| ||||||| || | | |||||||| ||| |||||| ||||||||||||||||
Sbjct: 1462566 cggcggcgccggaggaggaggagacgtcgtagcgccggccgaacacgctgcccatgatgt 1462625
Query: 1386 tgttgagagcggcggcctggaggtgcgggcggagggcgacggcgccagaggccgactgtt 1445
||||||| ||||||||||||||||| |||||||| |||||||||| | ||| ||||| |
Sbjct: 1462626 tgttgagcgcggcggcctggaggtgggggcggagcacgacggcgccggtggcggactgct 1462685
Query: 1446 cggcggcgatggagcggagcatggcctccgcgtcaccttggcgtcccggctcgtgcgagg 1505
||||||| |||| | ||||| ||| ||||| | ||||| ||||||||||||| ||
Sbjct: 1462686 cggcggccatggcggacagcatcgccgtggcgtcggcctggcgccccggctcgtgcgcgg 1462745
Query: 1506 cgacccggcgcggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtact 1565
|||| ||||| |||||||| ||||| ||||| |||| |||||||||| ||||||||||||
Sbjct: 1462746 cgacgcggcgaggggagaagaggtgggtggaggcgatgcggcggaggaggcgccagtact 1462805
Query: 1566 cgccgttgggcgcgaacccgatggcacgcgcgaacatgagctcccgggccgaccgcttca 1625
||||| |||| |||||||||||||| |||||||||| |||||||| ||||| |||||||
Sbjct: 1462806 cgccgctgggggcgaacccgatggcgcgcgcgaacagcagctcccgcgccgagcgcttca 1462865
Query: 1626 cagggcggtcggcgaatgacgggtgcgcgagcacctcacgtgccgtggccgggcaggacg 1685
|||||||||||||| |||||||||||||||||||| | ||||| |||||||| ||||
Sbjct: 1462866 gcgggcggtcggcgaacgacgggtgcgcgagcacctccctcgccgtcgccgggcacgacg 1462925
Query: 1686 acacgaccgcgggcgtgtcaccgacggagaacgccatgagctccttggcccggggc---- 1741
|||| ||||| ||||| || |||||||||||||||||||||||| | ||||| |||
Sbjct: 1462926 acaccaccgccggcgtctccccgacggagaacgccatgagctccctcgcccgtggcgccg 1462985
Query: 1742 ctgcggcgcgggccatctcggcgagggcgcggtgcggca-gccccgggacagcgcgaaga 1800
| ||| |||| | |||| || |||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 1462986 ccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcgggaggccccgggagagcgcgaaga 1463045
Query: 1801 tgctgccgaacacgggcagaccacggggtcccacgataggagtgacgccgaggc-gccgc 1859
|||||||||||||||| || || ||||| ||| |||| || || ||||||||| |||||
Sbjct: 1463046 tgctgccgaacacggggagcccccggggcccctcgatgggcgtcgcgccgaggcggccgc 1463105
Query: 1860 ggccgttcgtccacgccggaccgcccggcgacgtggccca 1899
|||||| || ||||||||| ||||| || |||| ||||||
Sbjct: 1463106 ggccgtgcgcccacgccggcccgccgggggacgcggccca 1463145
Score = 541 bits (273), Expect = e-151
Identities = 516/597 (86%)
Strand = Plus / Plus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 1461566 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 1461625
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 1461626 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 1461685
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 1461686 ggcgacccagagggtgacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 1461745
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 1461746 ggcgccgaacggcgccaggcggaggtcgccgccgcggacgtcgacgtcggcgccgccctc 1461805
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 1461806 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 1461865
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 1461866 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 1461925
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 1461926 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 1461985
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 1461986 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 1462045
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 1462046 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 1462105
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgt 1014
||||| | ||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 1462106 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgt 1462162
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 1463198 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 1463257
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 1463258 gtggcgtc 1463265
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 658 bits (332), Expect = 0.0
Identities = 745/880 (84%), Gaps = 12/880 (1%)
Strand = Plus / Plus
Query: 1032 cccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagagga 1091
||||||||| ||||||||||||||| ||| |||| ||||||| |||||||||||||||
Sbjct: 13144203 cccagaggacggcgaccatgtcgtcctcggcgaggttctcgtgggcctcgagggagagga 13144262
Query: 1092 gcacgtcgacgaagtcagcattgtcgttgagggcggcggagttttggcggcggcgccggt 1151
| |||||||||||||| ||||||||| | || || |||| | ||||||| | ||||
Sbjct: 13144263 ggacgtcgacgaagtcggcattgtcggcggcggtggaggaggagtcgcggcggaggcggt 13144322
Query: 1152 gctcgtcgatgacgccacggacgaaggtctggacgcgcggcacgagcgcggcgcaccggc 1211
| ||| ||||||||| |||||||| | ||||||||| || |||||||||||||| ||||
Sbjct: 13144323 ggtcgcggatgacgccgcggacgaacgcctggacgcgggggacgagcgcggcgcagcggc 13144382
Query: 1212 gggtgacgttgcttgggtcgtacaggtgggcgagccaggggaggtggtcggaccagttga 1271
||| ||||| | | |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 13144383 gggcgacgtggttggggtcgtagaggtgggcgagccatgggaggtggtcggaccagttga 13144442
Query: 1272 aggcgccgaggagctcgaacccctcgcgcaccatgctcttgagatgctcggcctccgcgg 1331
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 13144443 acgcgccgaggagctcgaacccctcgcgcaccatgctcttgagctgctcggcctcgtcgg 13144502
Query: 1332 cgccggcgcctgatgtg------acgtcgtaccgcgtgccgaagacgctgcccatgatgt 1385
|| ||||||| || | | |||||||| ||| |||||| ||||||||||||||||
Sbjct: 13144503 cggcggcgccggaggaggaggagacgtcgtagcgccggccgaacacgctgcccatgatgt 13144562
Query: 1386 tgttgagagcggcggcctggaggtgcgggcggagggcgacggcgccagaggccgactgtt 1445
||||||| ||||||||||||||||| |||||||| |||||||||| | ||| ||||| |
Sbjct: 13144563 tgttgagcgcggcggcctggaggtgggggcggagcacgacggcgccggtggcggactgct 13144622
Query: 1446 cggcggcgatggagcggagcatggcctccgcgtcaccttggcgtcccggctcgtgcgagg 1505
||||||| |||| | ||||| ||| ||||| | ||||| ||||||||||||| ||
Sbjct: 13144623 cggcggccatggcggacagcatcgccgtggcgtcggcctggcgccccggctcgtgcgcgg 13144682
Query: 1506 cgacccggcgcggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtact 1565
|||| ||||| |||||||| ||||| ||||| |||| |||||||||| ||||||||||||
Sbjct: 13144683 cgacgcggcgaggggagaagaggtgggtggaggcgatgcggcggaggaggcgccagtact 13144742
Query: 1566 cgccgttgggcgcgaacccgatggcacgcgcgaacatgagctcccgggccgaccgcttca 1625
||||| |||| |||||||||||||| |||||||||| |||||||| ||||| |||||||
Sbjct: 13144743 cgccgctgggggcgaacccgatggcgcgcgcgaacagcagctcccgcgccgagcgcttca 13144802
Query: 1626 cagggcggtcggcgaatgacgggtgcgcgagcacctcacgtgccgtggccgggcaggacg 1685
|||||||||||||| |||||||||||||||||||| | ||||| |||||||| ||||
Sbjct: 13144803 gcgggcggtcggcgaacgacgggtgcgcgagcacctccctcgccgtcgccgggcacgacg 13144862
Query: 1686 acacgaccgcgggcgtgtcaccgacggagaacgccatgagctccttggcccggggc---- 1741
|||| ||||| ||||| || |||||||||||||||||||||||| | ||||| |||
Sbjct: 13144863 acaccaccgccggcgtctccccgacggagaacgccatgagctccctcgcccgtggcgccg 13144922
Query: 1742 ctgcggcgcgggccatctcggcgagggcgcggtgcggca-gccccgggacagcgcgaaga 1800
| ||| |||| | |||| || |||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 13144923 ccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcgggaggccccgggagagcgcgaaga 13144982
Query: 1801 tgctgccgaacacgggcagaccacggggtcccacgataggagtgacgccgaggc-gccgc 1859
|||||||||||||||| || || ||||| ||| |||| || || ||||||||| |||||
Sbjct: 13144983 tgctgccgaacacggggagcccccggggcccctcgatgggcgtcgcgccgaggcggccgc 13145042
Query: 1860 ggccgttcgtccacgccggaccgcccggcgacgtggccca 1899
|||||| || ||||||||| ||||| || |||| ||||||
Sbjct: 13145043 ggccgtgcgcccacgccggcccgccgggggacgcggccca 13145082
Score = 541 bits (273), Expect = e-151
Identities = 516/597 (86%)
Strand = Plus / Plus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 13143503 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 13143562
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 13143563 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 13143622
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 13143623 ggcgacccagagggtgacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 13143682
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 13143683 ggcgccgaacggcgccaggcggaggtcgccgccgcggacgtcgacgtcggcgccgccctc 13143742
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 13143743 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 13143802
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 13143803 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 13143862
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 13143863 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 13143922
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 13143923 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 13143982
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 13143983 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 13144042
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgt 1014
||||| | ||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 13144043 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgt 13144099
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 13145135 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 13145194
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 13145195 gtggcgtc 13145202
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 658 bits (332), Expect = 0.0
Identities = 745/880 (84%), Gaps = 12/880 (1%)
Strand = Plus / Plus
Query: 1032 cccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagagga 1091
||||||||| ||||||||||||||| ||| |||| ||||||| |||||||||||||||
Sbjct: 13151543 cccagaggacggcgaccatgtcgtcctcggcgaggttctcgtgggcctcgagggagagga 13151602
Query: 1092 gcacgtcgacgaagtcagcattgtcgttgagggcggcggagttttggcggcggcgccggt 1151
| |||||||||||||| ||||||||| | || || |||| | ||||||| | ||||
Sbjct: 13151603 ggacgtcgacgaagtcggcattgtcggcggcggtggaggaggagtcgcggcggaggcggt 13151662
Query: 1152 gctcgtcgatgacgccacggacgaaggtctggacgcgcggcacgagcgcggcgcaccggc 1211
| ||| ||||||||| |||||||| | ||||||||| || |||||||||||||| ||||
Sbjct: 13151663 ggtcgcggatgacgccgcggacgaacgcctggacgcgggggacgagcgcggcgcagcggc 13151722
Query: 1212 gggtgacgttgcttgggtcgtacaggtgggcgagccaggggaggtggtcggaccagttga 1271
||| ||||| | | |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 13151723 gggcgacgtggttggggtcgtagaggtgggcgagccatgggaggtggtcggaccagttga 13151782
Query: 1272 aggcgccgaggagctcgaacccctcgcgcaccatgctcttgagatgctcggcctccgcgg 1331
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 13151783 acgcgccgaggagctcgaacccctcgcgcaccatgctcttgagctgctcggcctcgtcgg 13151842
Query: 1332 cgccggcgcctgatgtg------acgtcgtaccgcgtgccgaagacgctgcccatgatgt 1385
|| ||||||| || | | |||||||| ||| |||||| ||||||||||||||||
Sbjct: 13151843 cggcggcgccggaggaggaggagacgtcgtagcgccggccgaacacgctgcccatgatgt 13151902
Query: 1386 tgttgagagcggcggcctggaggtgcgggcggagggcgacggcgccagaggccgactgtt 1445
||||||| ||||||||||||||||| |||||||| |||||||||| | ||| ||||| |
Sbjct: 13151903 tgttgagcgcggcggcctggaggtgggggcggagcacgacggcgccggtggcggactgct 13151962
Query: 1446 cggcggcgatggagcggagcatggcctccgcgtcaccttggcgtcccggctcgtgcgagg 1505
||||||| |||| | ||||| ||| ||||| | ||||| ||||||||||||| ||
Sbjct: 13151963 cggcggccatggcggacagcatcgccgtggcgtcggcctggcgccccggctcgtgcgcgg 13152022
Query: 1506 cgacccggcgcggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtact 1565
|||| ||||| |||||||| ||||| ||||| |||| |||||||||| ||||||||||||
Sbjct: 13152023 cgacgcggcgaggggagaagaggtgggtggaggcgatgcggcggaggaggcgccagtact 13152082
Query: 1566 cgccgttgggcgcgaacccgatggcacgcgcgaacatgagctcccgggccgaccgcttca 1625
||||| |||| |||||||||||||| |||||||||| |||||||| ||||| |||||||
Sbjct: 13152083 cgccgctgggggcgaacccgatggcgcgcgcgaacagcagctcccgcgccgagcgcttca 13152142
Query: 1626 cagggcggtcggcgaatgacgggtgcgcgagcacctcacgtgccgtggccgggcaggacg 1685
|||||||||||||| |||||||||||||||||||| | ||||| |||||||| ||||
Sbjct: 13152143 gcgggcggtcggcgaacgacgggtgcgcgagcacctccctcgccgtcgccgggcacgacg 13152202
Query: 1686 acacgaccgcgggcgtgtcaccgacggagaacgccatgagctccttggcccggggc---- 1741
|||| ||||| ||||| || |||||||||||||||||||||||| | ||||| |||
Sbjct: 13152203 acaccaccgccggcgtctccccgacggagaacgccatgagctccctcgcccgtggcgccg 13152262
Query: 1742 ctgcggcgcgggccatctcggcgagggcgcggtgcggca-gccccgggacagcgcgaaga 1800
| ||| |||| | |||| || |||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 13152263 ccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcgggaggccccgggagagcgcgaaga 13152322
Query: 1801 tgctgccgaacacgggcagaccacggggtcccacgataggagtgacgccgaggc-gccgc 1859
|||||||||||||||| || || ||||| ||| |||| || || ||||||||| |||||
Sbjct: 13152323 tgctgccgaacacggggagcccccggggcccctcgatgggcgtcgcgccgaggcggccgc 13152382
Query: 1860 ggccgttcgtccacgccggaccgcccggcgacgtggccca 1899
|||||| || ||||||||| ||||| || |||| ||||||
Sbjct: 13152383 ggccgtgcgcccacgccggcccgccgggggacgcggccca 13152422
Score = 541 bits (273), Expect = e-151
Identities = 516/597 (86%)
Strand = Plus / Plus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 13150843 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 13150902
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 13150903 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 13150962
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 13150963 ggcgacccagagggtgacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 13151022
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 13151023 ggcgccgaacggcgccaggcggaggtcgccgccgcggacgtcgacgtcggcgccgccctc 13151082
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 13151083 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 13151142
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 13151143 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 13151202
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 13151203 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 13151262
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 13151263 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 13151322
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 13151323 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 13151382
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgt 1014
||||| | ||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 13151383 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgt 13151439
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 13152475 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 13152534
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 13152535 gtggcgtc 13152542
>gb|AACV01025745.1| Oryza sativa (japonica cultivar-group) Ctg025745, whole genome
shotgun sequence
Length = 15732
Score = 541 bits (273), Expect = e-151
Identities = 516/597 (86%)
Strand = Plus / Plus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 8810 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 8869
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 8870 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 8929
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 8930 ggcgacccagagggtgacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 8989
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 8990 ggcgccgaacggcgccaggcggaggtcgccgccgcggacgtcgacgtcggcgccgccctc 9049
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 9050 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 9109
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 9110 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 9169
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 9170 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 9229
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 9230 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 9289
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 9290 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 9349
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgt 1014
||||| | ||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 9350 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgt 9406
Score = 295 bits (149), Expect = 5e-077
Identities = 363/426 (85%), Gaps = 10/426 (2%)
Strand = Plus / Plus
Query: 1484 tggcgtcccggctcgtgcgaggcgacccggcgcggggagaataggtgcgtggacgcgacg 1543
||||| ||||||||||||| |||||| ||||| |||||||| ||||| ||||| |||| |
Sbjct: 9965 tggcgccccggctcgtgcgcggcgacgcggcgaggggagaagaggtgggtggaggcgatg 10024
Query: 1544 cggcggaggcggcgccagtactcgccgttgggcgcgaacccgatggcacgcgcgaacatg 1603
||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 10025 cggcggaggaggcgccagtactcgccgctgggggcgaacccgatggcgcgcgcgaacagc 10084
Query: 1604 agctcccgggccgaccgcttcacagggcggtcggcgaatgacgggtgcgcgagcacctca 1663
|||||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 10085 agctcccgcgccgagcgcttcagcgggcggtcggcgaacgacgggtgcgcgagcacctcc 10144
Query: 1664 cgtgccgtggccgggcaggacgacacgaccg-cgggcgtgtcaccgacggagaacgccat 1722
| ||||| |||||||| |||||||| |||| ||||||| || |||||||||||||||||
Sbjct: 10145 ctcgccgtcgccgggcacgacgacaccaccgccgggcgtctccccgacggagaacgccat 10204
Query: 1723 gagctccttggcccg-gggc----ctgcggcgcgggccatctcggcgagggcgcggtgcg 1777
||||||| | ||||| |||| | ||| |||| | |||| || |||| ||||||||||
Sbjct: 10205 gagctccctcgcccgtgggcgccgccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcg 10264
Query: 1778 gca-gccccgggacagcgcgaagatgctgccgaacac-gggcag-accacggggtcccac 1834
| | ||||||||| ||||||||||||||||||||||| ||| || || ||||| ||| |
Sbjct: 10265 ggaggccccgggagagcgcgaagatgctgccgaacacgggggagccccccggggcccctc 10324
Query: 1835 gataggagtgacgccgaggc-gccgcggccgttcgtccacgccggaccgcccggcgacgt 1893
||| || || ||||||||| ||||||||||| || ||||||||| ||||| || ||||
Sbjct: 10325 gatgggcgtcgcgccgaggcggccgcggccgtgcgcccacgccggcccgccgggggacgc 10384
Query: 1894 ggccca 1899
||||||
Sbjct: 10385 ggccca 10390
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 10443 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 10502
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 10503 gtggcgtc 10510
>gb|CH401311.1| Oryza sativa (japonica cultivar-group) scaffold000150 genomic
scaffold, whole genome shotgun sequence
Length = 33448
Score = 541 bits (273), Expect = e-151
Identities = 516/597 (86%)
Strand = Plus / Plus
Query: 418 gcgggggatggctgcggcgacgagcggcgtcttcatctccagggagagcttgaggacctc 477
||||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 8810 gcggggggtggcggcggcggcgagaggggtcttcatctcgagggagagcttgaggacctc 8869
Query: 478 gtcgaggcaaacggccgccgcgccgtcaggcagggcccactggaaggcgtgcacgaggcg 537
||||||| | || | || || |||||| || ||| ||| | ||||||||| ||||||||
Sbjct: 8870 gtcgagggacaccggcggcgagccgtcggggaggaaccagtcgaaggcgtggacgaggcg 8929
Query: 538 ggcaacccagaggcccacggtggtgaggcccaggttcttgccggggcagacgcgacgccc 597
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 8930 ggcgacccagagggtgacggtggcgaggccgaggttcttgccggggcagacgcggcgccc 8989
Query: 598 ggcgccgaacggggccaggcggaggtcgacgccgcggacgtccacgtcggcgccgccctc 657
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 8990 ggcgccgaacggcgccaggcggaggtcgccgccgcggacgtcgacgtcggcgccgccctc 9049
Query: 658 ggagggcaggaaccgctccggcgcgaacgcgtccgggtcggcccacacggcggcatcgtg 717
|| || | ||||||||||||||||||||| ||||||||||||||||| || | |||||
Sbjct: 9050 cgacgggatgaaccgctccggcgcgaacgcctccgggtcggcccacacctcgccgtcgtg 9109
Query: 718 ggttatggcccacatattcaccatcgccgtggtgccagccgggaccaccatgccgttgca 777
||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 9110 ggtgatggcccacatgttcaccatcgccgtcgtgcccgccggcaccaccatgccgttggc 9169
Query: 778 gagtggcacgtcggcggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggc 837
||| ||||||||||||||| || || ||||||||||||||||| || |||||||| ||
Sbjct: 9170 gagccccacgtcggcggtggccagccgcgcccagctcagcagcggccccggcgggtgcgc 9229
Query: 838 gcgcagcgtctccttcacaaccgcctgcaggtacggcatgcgcgccacgtcggcgtcggt 897
| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 9230 cctcagcgtctccttcaccaccgcctgcaggtacggcatccgcgccacgtcgccgtcgct 9289
Query: 898 ggggcaacctccggcaccgacagccgcgtcgacctcggcgcgcaccctcgcctgcaccgc 957
||| || || || | || || |||||||| ||||| || | || |||||||||||||||
Sbjct: 9290 gggacacccgtcgccgcccaccgccgcgtccacctccgccctcagcctcgcctgcaccgc 9349
Query: 958 cgggtggcgcaccagctccgccatgcaccactcggtcagaagcgccgtcgtgtccgt 1014
||||| | ||||| |||||||||||||||||| |||| | |||||||||||||||
Sbjct: 9350 cgggttcctcaccacctccgccatgcaccactccgtcaccaacgccgtcgtgtccgt 9406
Score = 295 bits (149), Expect = 5e-077
Identities = 363/426 (85%), Gaps = 10/426 (2%)
Strand = Plus / Plus
Query: 1484 tggcgtcccggctcgtgcgaggcgacccggcgcggggagaataggtgcgtggacgcgacg 1543
||||| ||||||||||||| |||||| ||||| |||||||| ||||| ||||| |||| |
Sbjct: 9965 tggcgccccggctcgtgcgcggcgacgcggcgaggggagaagaggtgggtggaggcgatg 10024
Query: 1544 cggcggaggcggcgccagtactcgccgttgggcgcgaacccgatggcacgcgcgaacatg 1603
||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 10025 cggcggaggaggcgccagtactcgccgctgggggcgaacccgatggcgcgcgcgaacagc 10084
Query: 1604 agctcccgggccgaccgcttcacagggcggtcggcgaatgacgggtgcgcgagcacctca 1663
|||||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 10085 agctcccgcgccgagcgcttcagcgggcggtcggcgaacgacgggtgcgcgagcacctcc 10144
Query: 1664 cgtgccgtggccgggcaggacgacacgaccg-cgggcgtgtcaccgacggagaacgccat 1722
| ||||| |||||||| |||||||| |||| ||||||| || |||||||||||||||||
Sbjct: 10145 ctcgccgtcgccgggcacgacgacaccaccgccgggcgtctccccgacggagaacgccat 10204
Query: 1723 gagctccttggcccg-gggc----ctgcggcgcgggccatctcggcgagggcgcggtgcg 1777
||||||| | ||||| |||| | ||| |||| | |||| || |||| ||||||||||
Sbjct: 10205 gagctccctcgcccgtgggcgccgccgcgtcgcgcgacatcgcgtcgagcgcgcggtgcg 10264
Query: 1778 gca-gccccgggacagcgcgaagatgctgccgaacac-gggcag-accacggggtcccac 1834
| | ||||||||| ||||||||||||||||||||||| ||| || || ||||| ||| |
Sbjct: 10265 ggaggccccgggagagcgcgaagatgctgccgaacacgggggagccccccggggcccctc 10324
Query: 1835 gataggagtgacgccgaggc-gccgcggccgttcgtccacgccggaccgcccggcgacgt 1893
||| || || ||||||||| ||||||||||| || ||||||||| ||||| || ||||
Sbjct: 10325 gatgggcgtcgcgccgaggcggccgcggccgtgcgcccacgccggcccgccgggggacgc 10384
Query: 1894 ggccca 1899
||||||
Sbjct: 10385 ggccca 10390
Score = 87.7 bits (44), Expect = 2e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1952 gccgggtgggcgcacagggtgtcggagccgagcagcgccgggagcgcgtacacccaccac 2011
|||||||||||||| |||||||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 10443 gccgggtgggcgcagagggtgtcggcgccgaggagcgccgggagggcgtacgcccaccac 10502
Query: 2012 gtgccgtc 2019
||| ||||
Sbjct: 10503 gtggcgtc 10510
>gb|CB657899.1|CB657899 OSJNEc13I24.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13I24 5', mRNA sequence
Length = 780
Score = 85.7 bits (43), Expect = 9e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1520 gagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcg 1579
||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 626 gagaagaggtgcgtggacgcgacgcggcggagcgcgcgccagtacgtgccgtagggcgcg 567
Query: 1580 aacccgatggc 1590
|||||||||||
Sbjct: 566 aacccgatggc 556
>dbj|AK072163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131L23, full
insert sequence
Length = 2102
Score = 85.7 bits (43), Expect = 9e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1520 gagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcg 1579
||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 644 gagaagaggtgcgtggacgcgacgcggcggagcgcgcgccagtacgtgccgtagggcgcg 585
Query: 1580 aacccgatggc 1590
|||||||||||
Sbjct: 584 aacccgatggc 574
Score = 69.9 bits (35), Expect = 5e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 985 ccactcggtcagaagcgccgtcgtgtccgtaccgcggaagaccatctcccagaggatggc 1044
||||||| |||| | |||| ||||||||| || || |||| |||||||||||||| |||
Sbjct: 1173 ccactcgatcaggaccgccaccgtgtccgtccctcgaaagatcatctcccagaggacggc 1114
Query: 1045 gaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagaggagcacgtcg 1099
|||||||||| ||||| |||||| ||| | || | ||||||||| || ||||||
Sbjct: 1113 gaccatgtcggcgtcggagagcttgtcgccgccgtggagggagagaaggacgtcg 1059
Score = 54.0 bits (27), Expect = 3e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1241 gcgagccaggggaggtggtcggaccagttga 1271
|||||||| ||||||||||||||||||||||
Sbjct: 926 gcgagccatgggaggtggtcggaccagttga 896
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||| ||| |||||||| ||| ||||| | || ||||||||||||||||| ||||||||
Sbjct: 1473 gaactcgttcgggtcgggccaaacggcagggtcatgggttatggcccacatgttcaccat 1414
Query: 742 cgccgtggtgccag 755
|| ||||| ||||
Sbjct: 1413 ggcggtggtcccag 1400
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0544G09
Length = 137481
Score = 85.7 bits (43), Expect = 9e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1520 gagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcg 1579
||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 41747 gagaagaggtgcgtggacgcgacgcggcggagcgcgcgccagtacgtgccgtagggcgcg 41806
Query: 1580 aacccgatggc 1590
|||||||||||
Sbjct: 41807 aacccgatggc 41817
Score = 54.0 bits (27), Expect = 3e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1241 gcgagccaggggaggtggtcggaccagttga 1271
|||||||| ||||||||||||||||||||||
Sbjct: 41465 gcgagccatgggaggtggtcggaccagttga 41495
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||| ||| |||||||| ||| ||||| | || ||||||||||||||||| ||||||||
Sbjct: 40815 gaactcgttcgggtcgggccaaacggcagggtcatgggttatggcccacatgttcaccat 40874
Query: 742 cgccgtggtgccag 755
|| ||||| ||||
Sbjct: 40875 ggcggtggtcccag 40888
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1032 cccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagagga 1091
||||||||| ||||||||||||| ||||| |||||| ||| | || | ||||||||| |
Sbjct: 41265 cccagaggacggcgaccatgtcggcgtcggagagcttgtcgccgccgtggagggagagaa 41324
Query: 1092 gcacgtcg 1099
| ||||||
Sbjct: 41325 ggacgtcg 41332
>ref|XM_483643.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2102
Score = 85.7 bits (43), Expect = 9e-014
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1520 gagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcg 1579
||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 644 gagaagaggtgcgtggacgcgacgcggcggagcgcgcgccagtacgtgccgtagggcgcg 585
Query: 1580 aacccgatggc 1590
|||||||||||
Sbjct: 584 aacccgatggc 574
Score = 69.9 bits (35), Expect = 5e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 985 ccactcggtcagaagcgccgtcgtgtccgtaccgcggaagaccatctcccagaggatggc 1044
||||||| |||| | |||| ||||||||| || || |||| |||||||||||||| |||
Sbjct: 1173 ccactcgatcaggaccgccaccgtgtccgtccctcgaaagatcatctcccagaggacggc 1114
Query: 1045 gaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagaggagcacgtcg 1099
|||||||||| ||||| |||||| ||| | || | ||||||||| || ||||||
Sbjct: 1113 gaccatgtcggcgtcggagagcttgtcgccgccgtggagggagagaaggacgtcg 1059
Score = 54.0 bits (27), Expect = 3e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1241 gcgagccaggggaggtggtcggaccagttga 1271
|||||||| ||||||||||||||||||||||
Sbjct: 926 gcgagccatgggaggtggtcggaccagttga 896
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||| ||| |||||||| ||| ||||| | || ||||||||||||||||| ||||||||
Sbjct: 1473 gaactcgttcgggtcgggccaaacggcagggtcatgggttatggcccacatgttcaccat 1414
Query: 742 cgccgtggtgccag 755
|| ||||| ||||
Sbjct: 1413 ggcggtggtcccag 1400
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 85.7 bits (43), Expect = 9e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1520 gagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcg 1579
||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 27176865 gagaagaggtgcgtggacgcgacgcggcggagcgcgcgccagtacgtgccgtagggcgcg 27176924
Query: 1580 aacccgatggc 1590
|||||||||||
Sbjct: 27176925 aacccgatggc 27176935
Score = 54.0 bits (27), Expect = 3e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1241 gcgagccaggggaggtggtcggaccagttga 1271
|||||||| ||||||||||||||||||||||
Sbjct: 27176583 gcgagccatgggaggtggtcggaccagttga 27176613
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||| ||| |||||||| ||| ||||| | || ||||||||||||||||| ||||||||
Sbjct: 27175933 gaactcgttcgggtcgggccaaacggcagggtcatgggttatggcccacatgttcaccat 27175992
Query: 742 cgccgtggtgccag 755
|| ||||| ||||
Sbjct: 27175993 ggcggtggtcccag 27176006
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1032 cccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagagga 1091
||||||||| ||||||||||||| ||||| |||||| ||| | || | ||||||||| |
Sbjct: 27176383 cccagaggacggcgaccatgtcggcgtcggagagcttgtcgccgccgtggagggagagaa 27176442
Query: 1092 gcacgtcg 1099
| ||||||
Sbjct: 27176443 ggacgtcg 27176450
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 85.7 bits (43), Expect = 9e-014
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1520 gagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcg 1579
||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 27414952 gagaagaggtgcgtggacgcgacgcggcggagcgcgcgccagtacgtgccgtagggcgcg 27415011
Query: 1580 aacccgatggc 1590
|||||||||||
Sbjct: 27415012 aacccgatggc 27415022
Score = 54.0 bits (27), Expect = 3e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1241 gcgagccaggggaggtggtcggaccagttga 1271
|||||||| ||||||||||||||||||||||
Sbjct: 27414670 gcgagccatgggaggtggtcggaccagttga 27414700
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||| ||| |||||||| ||| ||||| | || ||||||||||||||||| ||||||||
Sbjct: 27414020 gaactcgttcgggtcgggccaaacggcagggtcatgggttatggcccacatgttcaccat 27414079
Query: 742 cgccgtggtgccag 755
|| ||||| ||||
Sbjct: 27414080 ggcggtggtcccag 27414093
Score = 48.1 bits (24), Expect = 0.020
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1032 cccagaggatggcgaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagagga 1091
||||||||| ||||||||||||| ||||| |||||| ||| | || | ||||||||| |
Sbjct: 27414470 cccagaggacggcgaccatgtcggcgtcggagagcttgtcgccgccgtggagggagagaa 27414529
Query: 1092 gcacgtcg 1099
| ||||||
Sbjct: 27414530 ggacgtcg 27414537
>gb|CB673949.1|CB673949 OSJNEe08M02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08M02 5', mRNA sequence
Length = 721
Score = 77.8 bits (39), Expect = 2e-011
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 1520 gagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcg 1579
||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||
Sbjct: 199 gagaagaggtgcgtggacgcgacgcggcggagcgcgcgccagtacgtcccgtagggcgcg 140
Query: 1580 aacccgatggc 1590
|||||||||||
Sbjct: 139 aacccgatggc 129
Score = 67.9 bits (34), Expect = 2e-008
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 1006 cgtgtccgtaccgcggaagaccatctcccagaggatggcgaccatgtcgtcgtcgccgag 1065
||||||||| || || |||| |||||||||||||| ||||||||||||| ||||| |||
Sbjct: 707 cgtgtccgtccctcgaaagatcatctcccagaggacggcgaccatgtcggcgtcggagag 648
Query: 1066 cttctcgtcaccctcgagggagaggagcacgtcg 1099
||| ||| | || | ||||||||| || ||||||
Sbjct: 647 cttgtcgccgccgtggagggagagaaggacgtcg 614
Score = 46.1 bits (23), Expect = 0.078
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1241 gcgagccaggggaggtggtcggaccag 1267
|||||||| ||||||||||||||||||
Sbjct: 481 gcgagccatgggaggtggtcggaccag 455
>gb|AACV01016741.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016741, whole
genome shotgun sequence
Length = 10714
Score = 71.9 bits (36), Expect = 1e-009
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| ||||||||||||||| |||||
Sbjct: 7651 tgccagggcagacgcggcggccggcgccgaacggcgccaggcggaggtcgccgccg 7596
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 7554 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 7495
Query: 742 cgccgt 747
||||||
Sbjct: 7494 cgccgt 7489
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 7442 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 7383
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 71.9 bits (36), Expect = 1e-009
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| ||||||||||||||| |||||
Sbjct: 10155376 tgccagggcagacgcggcggccggcgccgaacggcgccaggcggaggtcgccgccg 10155321
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 10155279 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 10155220
Query: 742 cgccgt 747
||||||
Sbjct: 10155219 cgccgt 10155214
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 10155167 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 10155108
Score = 44.1 bits (22), Expect = 0.31
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 667 gaaccgctccggcgcgaacgcgtccgggtc 696
||||||||||||| ||||| ||||||||||
Sbjct: 1150818 gaaccgctccggcacgaactcgtccgggtc 1150789
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 71.9 bits (36), Expect = 1e-009
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| ||||||||||||||| |||||
Sbjct: 23554815 tgccagggcagacgcggcggccggcgccgaacggcgccaggcggaggtcgccgccg 23554760
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 23554718 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 23554659
Query: 742 cgccgt 747
||||||
Sbjct: 23554658 cgccgt 23554653
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 23554606 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 23554547
Score = 44.1 bits (22), Expect = 0.31
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 667 gaaccgctccggcgcgaacgcgtccgggtc 696
||||||||||||| ||||| ||||||||||
Sbjct: 14550257 gaaccgctccggcacgaactcgtccgggtc 14550228
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1532 gtggacgcgacgcggcggaggcggcg 1557
||||||| ||||||||||||||||||
Sbjct: 446447 gtggacgagacgcggcggaggcggcg 446472
>gb|CB655569.1|CB655569 OSJNEc09C03.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09C03 5', mRNA sequence
Length = 827
Score = 69.9 bits (35), Expect = 5e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 985 ccactcggtcagaagcgccgtcgtgtccgtaccgcggaagaccatctcccagaggatggc 1044
||||||| |||| | |||| ||||||||| || || |||| |||||||||||||| |||
Sbjct: 364 ccactcgatcaggaccgccaccgtgtccgtccctcgaaagatcatctcccagaggacggc 305
Query: 1045 gaccatgtcgtcgtcgccgagcttctcgtcaccctcgagggagaggagcacgtcg 1099
|||||||||| ||||| |||||| ||| | || | ||||||||| || ||||||
Sbjct: 304 gaccatgtcggcgtcggagagcttgtcgccgccgtggagggagagaaggacgtcg 250
Score = 54.0 bits (27), Expect = 3e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1241 gcgagccaggggaggtggtcggaccagttga 1271
|||||||| ||||||||||||||||||||||
Sbjct: 117 gcgagccatgggaggtggtcggaccagttga 87
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||| ||| |||||||| ||| ||||| | || ||||||||||||||||| ||||||||
Sbjct: 664 gaactcgttcgggtcgggccaaacggcagggtcatgggttatggcccacatgttcaccat 605
Query: 742 cgccgtggtgccag 755
|| ||||| ||||
Sbjct: 604 ggcggtggtcccag 591
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1531_B07
Length = 115245
Score = 69.9 bits (35), Expect = 5e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 695 tcggcccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggtgcca 754
|||||||||||| ||| ||||| | |||||||||||| ||||||||||| |||||||||
Sbjct: 19576 tcggcccacacgtcggggtcgtgtgctatggcccacatgttcaccatcgcggtggtgcca 19517
Query: 755 gccggga 761
|| ||||
Sbjct: 19516 gcgggga 19510
Score = 69.9 bits (35), Expect = 5e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1516 cggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttggg 1575
||||||||| |||||||||||||| || || || || |||||||||| |||||| |||
Sbjct: 18660 cggggagaagaggtgcgtggacgccacccgccgcagcgcgcgccagtacgcgccgtgggg 18601
Query: 1576 cgcgaacccgatggc 1590
|||||||||||||||
Sbjct: 18600 cgcgaacccgatggc 18586
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1239 gggcgagccaggggaggtggtcggaccagttga 1271
|||||||||| ||||||||||||||||||||||
Sbjct: 18964 gggcgagccatgggaggtggtcggaccagttga 18932
>gb|AACV01020435.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020435, whole
genome shotgun sequence
Length = 31620
Score = 69.9 bits (35), Expect = 5e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 695 tcggcccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggtgcca 754
|||||||||||| ||| ||||| | |||||||||||| ||||||||||| |||||||||
Sbjct: 4629 tcggcccacacgtcggggtcgtgtgctatggcccacatgttcaccatcgcggtggtgcca 4688
Query: 755 gccggga 761
|| ||||
Sbjct: 4689 gcgggga 4695
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1239 gggcgagccaggggaggtggtcggaccagttga 1271
|||||||||| ||||||||||||||||||||||
Sbjct: 5241 gggcgagccatgggaggtggtcggaccagttga 5273
Score = 56.0 bits (28), Expect = 8e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1555 gcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||| |||||| ||||||||||||||||||
Sbjct: 5583 gcgccagtacgcgccgtggggcgcgaacccgatggc 5618
>ref|NT_107077.1| Oryza sativa (japonica cultivar-group)
Length = 1516644
Score = 69.9 bits (35), Expect = 5e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 695 tcggcccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggtgcca 754
|||||||||||| ||| ||||| | |||||||||||| ||||||||||| |||||||||
Sbjct: 284937 tcggcccacacgtcggggtcgtgtgctatggcccacatgttcaccatcgcggtggtgcca 284878
Query: 755 gccggga 761
|| ||||
Sbjct: 284877 gcgggga 284871
Score = 69.9 bits (35), Expect = 5e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1516 cggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttggg 1575
||||||||| |||||||||||||| || || || || |||||||||| |||||| |||
Sbjct: 284021 cggggagaagaggtgcgtggacgccacccgccgcagcgcgcgccagtacgcgccgtgggg 283962
Query: 1576 cgcgaacccgatggc 1590
|||||||||||||||
Sbjct: 283961 cgcgaacccgatggc 283947
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1239 gggcgagccaggggaggtggtcggaccagttga 1271
|||||||||| ||||||||||||||||||||||
Sbjct: 284325 gggcgagccatgggaggtggtcggaccagttga 284293
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 69.9 bits (35), Expect = 5e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 695 tcggcccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggtgcca 754
|||||||||||| ||| ||||| | |||||||||||| ||||||||||| |||||||||
Sbjct: 9881353 tcggcccacacgtcggggtcgtgtgctatggcccacatgttcaccatcgcggtggtgcca 9881294
Query: 755 gccggga 761
|| ||||
Sbjct: 9881293 gcgggga 9881287
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1239 gggcgagccaggggaggtggtcggaccagttga 1271
|||||||||| ||||||||||||||||||||||
Sbjct: 9880741 gggcgagccatgggaggtggtcggaccagttga 9880709
Score = 56.0 bits (28), Expect = 8e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 1555 gcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||| |||||| ||||||||||||||||||
Sbjct: 9880399 gcgccagtacgcgccgtggggcgcgaacccgatggc 9880364
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 69.9 bits (35), Expect = 5e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 695 tcggcccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggtgcca 754
|||||||||||| ||| ||||| | |||||||||||| ||||||||||| |||||||||
Sbjct: 19355164 tcggcccacacgtcggggtcgtgtgctatggcccacatgttcaccatcgcggtggtgcca 19355105
Query: 755 gccggga 761
|| ||||
Sbjct: 19355104 gcgggga 19355098
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1239 gggcgagccaggggaggtggtcggaccagttga 1271
|||||||||| ||||||||||||||||||||||
Sbjct: 19354552 gggcgagccatgggaggtggtcggaccagttga 19354520
Score = 56.0 bits (28), Expect = 8e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 1555 gcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||| |||||| ||||||||||||||||||
Sbjct: 19354210 gcgccagtacgcgccgtggggcgcgaacccgatggc 19354175
Score = 46.1 bits (23), Expect = 0.078
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 51 aatacatatatatgtatataata 73
|||||||||||||||||||||||
Sbjct: 9270333 aatacatatatatgtatataata 9270311
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 69.9 bits (35), Expect = 5e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 695 tcggcccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggtgcca 754
|||||||||||| ||| ||||| | |||||||||||| ||||||||||| |||||||||
Sbjct: 20391437 tcggcccacacgtcggggtcgtgtgctatggcccacatgttcaccatcgcggtggtgcca 20391378
Query: 755 gccggga 761
|| ||||
Sbjct: 20391377 gcgggga 20391371
Score = 69.9 bits (35), Expect = 5e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1516 cggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttggg 1575
||||||||| |||||||||||||| || || || || |||||||||| |||||| |||
Sbjct: 20390521 cggggagaagaggtgcgtggacgccacccgccgcagcgcgcgccagtacgcgccgtgggg 20390462
Query: 1576 cgcgaacccgatggc 1590
|||||||||||||||
Sbjct: 20390461 cgcgaacccgatggc 20390447
Score = 58.0 bits (29), Expect = 2e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1239 gggcgagccaggggaggtggtcggaccagttga 1271
|||||||||| ||||||||||||||||||||||
Sbjct: 20390825 gggcgagccatgggaggtggtcggaccagttga 20390793
Score = 46.1 bits (23), Expect = 0.078
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 51 aatacatatatatgtatataata 73
|||||||||||||||||||||||
Sbjct: 10327807 aatacatatatatgtatataata 10327785
>gb|CA754722.1|CA754722 BR030005000_PLATE_G07_55_055.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030005000_PLATE_G07_55_055.ab1 similar to cinnamic
acid 4-hydroxylase [Sorghum bicolor], mRNA sequence
Length = 626
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 142 cgcagcgtctccttcaccaccgcctgcaggtacggca 106
>dbj|AK100598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C01, full
insert sequence
Length = 1838
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 1159 cgcagcgtctccttcaccaccgcctgcaggtacggca 1123
>dbj|AK104994.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H11, full
insert sequence
Length = 1796
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 1161 cgcagcgtctccttcaccaccgcctgcaggtacggca 1125
>gb|AACV01011747.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011747, whole
genome shotgun sequence
Length = 14985
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 14405 cgcagcgtctccttcaccaccgcctgcaggtacggca 14369
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22,
complete sequence
Length = 166052
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 102627 cgcagcgtctccttcaccaccgcctgcaggtacggca 102663
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 2300368 cgcagcgtctccttcaccaccgcctgcaggtacggca 2300404
>gb|CH401204.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000041 genomic
scaffold, whole genome shotgun sequence
Length = 2540762
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 2244947 cgcagcgtctccttcaccaccgcctgcaggtacggca 2244983
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 14510347 cgcagcgtctccttcaccaccgcctgcaggtacggca 14510383
Score = 54.0 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1554 ggcgccagtactcgccgttgggcgcgaacccgatg 1588
|||||||||||||||||| |||||||||| |||||
Sbjct: 16754411 ggcgccagtactcgccgtagggcgcgaacgcgatg 16754377
Score = 46.1 bits (23), Expect = 0.078
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1538 gcgacgcggcggaggcggcgcca 1560
|||||||||||||||||||||||
Sbjct: 25075871 gcgacgcggcggaggcggcgcca 25075849
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 65.9 bits (33), Expect = 8e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 839 cgcagcgtctccttcacaaccgcctgcaggtacggca 875
||||||||||||||||| |||||||||||||||||||
Sbjct: 14767213 cgcagcgtctccttcaccaccgcctgcaggtacggca 14767249
Score = 54.0 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1554 ggcgccagtactcgccgttgggcgcgaacccgatg 1588
|||||||||||||||||| |||||||||| |||||
Sbjct: 17058589 ggcgccagtactcgccgtagggcgcgaacgcgatg 17058555
Score = 50.1 bits (25), Expect = 0.005
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 578 ccggggcagacgcgacgcccggcgccgaacggg 610
|||||||| ||||| ||||||||||||||||||
Sbjct: 20648561 ccggggcacacgcgccgcccggcgccgaacggg 20648593
Score = 46.1 bits (23), Expect = 0.078
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1538 gcgacgcggcggaggcggcgcca 1560
|||||||||||||||||||||||
Sbjct: 25343368 gcgacgcggcggaggcggcgcca 25343346
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBb0040H10
Length = 132919
Score = 63.9 bits (32), Expect = 3e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| || |||||||||||| |||||
Sbjct: 17694 tgccagggcagacgcggcggccggcgccgaacggcgcgaggcggaggtcgccgccg 17639
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 17597 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 17538
Query: 742 cgccgt 747
||||||
Sbjct: 17537 cgccgt 17532
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 17486 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 17427
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBb0039M16
Length = 133229
Score = 63.9 bits (32), Expect = 3e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| || |||||||||||| |||||
Sbjct: 117824 tgccagggcagacgcggcggccggcgccgaacggcgcgaggcggaggtcgccgccg 117769
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 117727 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 117668
Query: 742 cgccgt 747
||||||
Sbjct: 117667 cgccgt 117662
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 117616 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 117557
>ref|XM_479078.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1578
Score = 63.9 bits (32), Expect = 3e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| || |||||||||||| |||||
Sbjct: 1420 tgccagggcagacgcggcggccggcgccgaacggcgcgaggcggaggtcgccgccg 1365
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 1323 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 1264
Query: 742 cgccgt 747
||||||
Sbjct: 1263 cgccgt 1258
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 1212 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 1153
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 63.9 bits (32), Expect = 3e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| || |||||||||||| |||||
Sbjct: 12274762 tgccagggcagacgcggcggccggcgccgaacggcgcgaggcggaggtcgccgccg 12274707
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 12274665 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 12274606
Query: 742 cgccgt 747
||||||
Sbjct: 12274605 cgccgt 12274600
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 12274554 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 12274495
Score = 44.1 bits (22), Expect = 0.31
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 667 gaaccgctccggcgcgaacgcgtccgggtc 696
||||||||||||| ||||| ||||||||||
Sbjct: 3131100 gaaccgctccggcacgaactcgtccgggtc 3131071
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 63.9 bits (32), Expect = 3e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
|||| ||||||||||| || |||||||||||||| || |||||||||||| |||||
Sbjct: 24661757 tgccagggcagacgcggcggccggcgccgaacggcgcgaggcggaggtcgccgccg 24661702
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||||| ||||| || | ||| |||||||| ||||||| || |||||||| ||||||||
Sbjct: 24661660 gaacgcatccggctccggccagacggcggcgtcgtgggcgatcgcccacatgttcaccat 24661601
Query: 742 cgccgt 747
||||||
Sbjct: 24661600 cgccgt 24661595
Score = 48.1 bits (24), Expect = 0.020
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 796 ggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtctccttcac 855
||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 24661549 ggcgaggcgcgcccacgacaggagcgggcccggcgggtgcatgcgcagcgtctccttcac 24661490
Score = 44.1 bits (22), Expect = 0.31
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 667 gaaccgctccggcgcgaacgcgtccgggtc 696
||||||||||||| ||||| ||||||||||
Sbjct: 15508025 gaaccgctccggcacgaactcgtccgggtc 15507996
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1532 gtggacgcgacgcggcggaggcggcg 1557
||||||| ||||||||||||||||||
Sbjct: 453055 gtggacgagacgcggcggaggcggcg 453080
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
sequence
Length = 153247
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 44401 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 44459
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 44538 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 44581
Score = 46.1 bits (23), Expect = 0.078
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1540 gacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||||| ||||||||| |||||| |||||||||||| |||||
Sbjct: 45443 gacgcggcggagcgcgcgccagtagtcgccggagggcgcgaaccccatggc 45493
>gb|AACV01006918.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006918, whole
genome shotgun sequence
Length = 5796
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 5158 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 5216
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 5295 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 5338
>ref|XM_468710.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1548
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 1393 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 1335
Score = 50.1 bits (25), Expect = 0.005
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1006 cgtgtccgtaccgcggaagaccatctcccagaggatggcgaccatgtcg 1054
||||||||| || || |||| |||||||||||| | |||||||||||||
Sbjct: 975 cgtgtccgtcccccgaaagatcatctcccagagaacggcgaccatgtcg 927
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 1256 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 1213
Score = 46.1 bits (23), Expect = 0.078
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1540 gacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||||| ||||||||| |||||| |||||||||||| |||||
Sbjct: 450 gacgcggcggagcgcgcgccagtagtcgccggagggcgcgaaccccatggc 400
>ref|NT_079921.2| Oryza sativa (japonica cultivar-group)
Length = 1595909
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 632745 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 632803
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 632882 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 632925
Score = 46.1 bits (23), Expect = 0.078
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1540 gacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||||| ||||||||| |||||| |||||||||||| |||||
Sbjct: 633787 gacgcggcggagcgcgcgccagtagtcgccggagggcgcgaaccccatggc 633837
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 3836068 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 3836126
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 3836205 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 3836248
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 17886775 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 17886833
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 17886912 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 17886955
Score = 46.1 bits (23), Expect = 0.078
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1395 cggcggcctggaggtgcgggcggaggg 1421
|||||||||||||||| ||||||||||
Sbjct: 36861115 cggcggcctggaggtgtgggcggaggg 36861141
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 17146577 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 17146635
Score = 60.0 bits (30), Expect = 5e-006
Identities = 93/114 (81%)
Strand = Plus / Plus
Query: 1528 gtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgat 1587
||||| |||||| | |||||| || |||||||||||| |||||| || |||||||| ||
Sbjct: 22374477 gtgcgcggacgccaggcggcgcagccggcgccagtacccgccgtgcggggcgaaccccat 22374536
Query: 1588 ggcacgcgcgaacatgagctcccgggccgaccgcttcacagggcggtcggcgaa 1641
||| || ||||||||||||| ||| | | |||||| ||||||||||||||
Sbjct: 22374537 ggcgcggtggaacatgagctccgcggcggcctccttcacggggcggtcggcgaa 22374590
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 17146714 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 17146757
Score = 46.1 bits (23), Expect = 0.078
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1395 cggcggcctggaggtgcgggcggaggg 1421
|||||||||||||||| ||||||||||
Sbjct: 35937910 cggcggcctggaggtgtgggcggaggg 35937936
Score = 46.1 bits (23), Expect = 0.078
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1540 gacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||||| ||||||||| |||||| |||||||||||| |||||
Sbjct: 17147619 gacgcggcggagcgcgcgccagtagtcgccggagggcgcgaaccccatggc 17147669
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 61.9 bits (31), Expect = 1e-006
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 573 tcttgccggggcagacgcgacgcccggcgccgaacggggccaggcggaggtcgacgccg 631
||||||| |||||| |||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 17153008 tcttgcccgggcaggcgcgccgccccgcgccgaacggcgcgaggcggaggtcgccgccg 17153066
Score = 60.0 bits (30), Expect = 5e-006
Identities = 93/114 (81%)
Strand = Plus / Plus
Query: 1528 gtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgat 1587
||||| |||||| | |||||| || |||||||||||| |||||| || |||||||| ||
Sbjct: 22381448 gtgcgcggacgccaggcggcgcagccggcgccagtacccgccgtgcggggcgaaccccat 22381507
Query: 1588 ggcacgcgcgaacatgagctcccgggccgaccgcttcacagggcggtcggcgaa 1641
||| || ||||||||||||| ||| | | |||||| ||||||||||||||
Sbjct: 22381508 ggcgcggtggaacatgagctccgcggcggcctccttcacggggcggtcggcgaa 22381561
Score = 48.1 bits (24), Expect = 0.020
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 722 atggcccacatattcaccatcgccgtggtgccagccgggaccac 765
||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 17153145 atggcccacatgttgaccatggccgtggtgcccgcggggaccac 17153188
Score = 46.1 bits (23), Expect = 0.078
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1395 cggcggcctggaggtgcgggcggaggg 1421
|||||||||||||||| ||||||||||
Sbjct: 35847780 cggcggcctggaggtgtgggcggaggg 35847806
Score = 46.1 bits (23), Expect = 0.078
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1540 gacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgatggc 1590
|||||||||||| ||||||||| |||||| |||||||||||| |||||
Sbjct: 17154050 gacgcggcggagcgcgcgccagtagtcgccggagggcgcgaaccccatggc 17154100
>gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic sequence, complete
sequence
Length = 73070
Score = 60.0 bits (30), Expect = 5e-006
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 1528 gtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgat 1587
||||| |||||| | |||||| || |||||||||||| |||||| || |||||||| ||
Sbjct: 30996 gtgcgcggacgccaggcggcgcagccggcgccagtacccgccgtgcggggcgaaccccat 30937
Query: 1588 ggcacgcgcgaacatgagctcccgggccgaccgcttcacagggcggtcggcgaa 1641
||| || ||||||||||||| ||| | | |||||| ||||||||||||||
Sbjct: 30936 ggcgcggtggaacatgagctccgcggcggcctccttcacggggcggtcggcgaa 30883
>ref|NT_107174.1| Oryza sativa (japonica cultivar-group)
Length = 4376475
Score = 60.0 bits (30), Expect = 5e-006
Identities = 93/114 (81%)
Strand = Plus / Plus
Query: 1528 gtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttgggcgcgaacccgat 1587
||||| |||||| | |||||| || |||||||||||| |||||| || |||||||| ||
Sbjct: 2969552 gtgcgcggacgccaggcggcgcagccggcgccagtacccgccgtgcggggcgaaccccat 2969611
Query: 1588 ggcacgcgcgaacatgagctcccgggccgaccgcttcacagggcggtcggcgaa 1641
||| || ||||||||||||| ||| | | |||||| ||||||||||||||
Sbjct: 2969612 ggcgcggtggaacatgagctccgcggcggcctccttcacggggcggtcggcgaa 2969665
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10,
complete sequence
Length = 148373
Score = 54.0 bits (27), Expect = 3e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1554 ggcgccagtactcgccgttgggcgcgaacccgatg 1588
|||||||||||||||||| |||||||||| |||||
Sbjct: 51956 ggcgccagtactcgccgtagggcgcgaacgcgatg 51922
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,968,621
Number of Sequences: 438736
Number of extensions: 3968621
Number of successful extensions: 71986
Number of sequences better than 0.5: 135
Number of HSP's better than 0.5 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62951
Number of HSP's gapped (non-prelim): 8996
length of query: 2104
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2082
effective length of database: 2,790,767,724
effective search space: 5810378401368
effective search space used: 5810378401368
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)