BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493976.2.1
(1294 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK073572.1| Oryza sativa (japonica cultivar-group) cDNA... 809 0.0
ref|XM_467754.1| Oryza sativa (japonica cultivar-group), mRNA 809 0.0
ref|XM_506968.1| PREDICTED Oryza sativa (japonica cultivar-... 809 0.0
dbj|AK107334.1| Oryza sativa (japonica cultivar-group) cDNA... 801 0.0
gb|CB645779.1|CB645779 OSJNEb07L24.f OSJNEb Oryza sativa (j... 684 0.0
gb|AACV01005399.1| Oryza sativa (japonica cultivar-group) c... 402 e-109
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 402 e-109
dbj|AP004114.3| Oryza sativa (japonica cultivar-group) geno... 402 e-109
dbj|AP005297.3| Oryza sativa (japonica cultivar-group) geno... 402 e-109
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 402 e-109
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 402 e-109
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 402 e-109
gb|CB645780.1|CB645780 OSJNEb07L24.r OSJNEb Oryza sativa (j... 327 9e-087
ref|XM_470717.1| Oryza sativa (japonica cultivar-group), mRNA 196 2e-047
gb|DQ061062.1| Oryza sativa (japonica cultivar-group) alpha... 196 2e-047
dbj|AK100179.1| Oryza sativa (japonica cultivar-group) cDNA... 172 3e-040
dbj|AK105988.1| Oryza sativa (japonica cultivar-group) cDNA... 172 3e-040
dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA... 172 3e-040
ref|XM_475418.1| Oryza sativa (japonica cultivar-group), p... 172 3e-040
gb|D39423.1|D39423 RICS0736A Rice shoot Oryza sativa (japon... 168 5e-039
gb|D41260.1|D41260 RICS3629A Rice shoot Oryza sativa (japon... 168 5e-039
gb|D41419.1|D41419 RICS3911A Rice shoot Oryza sativa (japon... 168 5e-039
dbj|AK070463.1| Oryza sativa (japonica cultivar-group) cDNA... 168 5e-039
gb|U30477.1|OSU30477 Oryza sativa (japonica cultivar-group)... 168 5e-039
ref|NM_190380.1| Oryza sativa (japonica cultivar-group), p... 168 5e-039
gb|AU078708.1|AU078708 AU078708 Rice cDNA from immature lea... 165 7e-038
gb|BE039217.1|BE039217 OA01E03 OA Oryza sativa (japonica cu... 161 1e-036
gb|AU078709.1|AU078709 AU078709 Rice cDNA from immature lea... 159 5e-036
gb|D47507.1|D47507 RICS13050A Rice green shoot Oryza sativa... 157 2e-035
gb|D40432.1|D40432 RICS2408A Rice shoot Oryza sativa (japon... 155 7e-035
gb|D41913.1|D41913 RICS4917A Rice shoot Oryza sativa (japon... 155 7e-035
gb|C91713.1|C91713 C91713 Rice panicle shorter than 3cm Ory... 149 4e-033
gb|D24200.1|D24200 RICR1518A Rice root Oryza sativa (japoni... 145 7e-032
gb|AACV01000668.1| Oryza sativa (japonica cultivar-group) c... 139 4e-030
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
ref|XM_493787.1| Oryza sativa (japonica cultivar-group), Oz... 139 4e-030
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 139 4e-030
dbj|AP000837.1| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
gb|DQ062981.1| Oryza sativa (japonica cultivar-group) alpha... 139 4e-030
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
dbj|AK070133.1| Oryza sativa (japonica cultivar-group) cDNA... 135 7e-029
gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 gen... 135 7e-029
dbj|AP003769.3| Oryza sativa (japonica cultivar-group) geno... 135 7e-029
gb|AACV01014938.1| Oryza sativa (japonica cultivar-group) c... 135 7e-029
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 135 7e-029
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 135 7e-029
gb|DQ061068.1| Oryza sativa (japonica cultivar-group) alpha... 135 7e-029
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 135 7e-029
gb|AC133338.2| Oryza sativa (japonica cultivar-group) chrom... 125 6e-026
gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 ... 125 6e-026
gb|AACV01006741.1| Oryza sativa (japonica cultivar-group) c... 125 6e-026
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 125 6e-026
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 125 6e-026
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 125 6e-026
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 125 6e-026
gb|AC125496.3| Oryza sativa (japonica cultivar-group) chrom... 125 6e-026
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 125 6e-026
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 125 6e-026
gb|CG408353.1|CG408353 Ds43 Ds insertion lines Oryza sativa... 119 4e-024
gb|D40027.1|D40027 RICS1746A Rice shoot Oryza sativa (japon... 119 4e-024
dbj|AP004128.1| Oryza sativa (japonica cultivar-group) chro... 119 4e-024
gb|AACV01003829.1| Oryza sativa (japonica cultivar-group) c... 119 4e-024
dbj|AP005428.2| Oryza sativa (japonica cultivar-group) geno... 119 4e-024
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 119 4e-024
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 119 4e-024
gb|DQ061055.1| Oryza sativa (japonica cultivar-group) alpha... 119 4e-024
gb|AC144737.2| Oryza sativa (japonica cultivar-group) chrom... 117 2e-023
gb|AACV01012416.1| Oryza sativa (japonica cultivar-group) c... 117 2e-023
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 117 2e-023
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 117 2e-023
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 117 2e-023
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 117 2e-023
dbj|AK101784.1| Oryza sativa (japonica cultivar-group) cDNA... 113 2e-022
dbj|AK119215.1| Oryza sativa (japonica cultivar-group) cDNA... 113 2e-022
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 ... 113 2e-022
gb|AACV01008182.1| Oryza sativa (japonica cultivar-group) c... 113 2e-022
ref|NM_185168.1| Oryza sativa (japonica cultivar-group), mRNA 113 2e-022
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 113 2e-022
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 113 2e-022
gb|CV730571.1|CV730571 FLO--04-C21.b1 Rice flower lambda ph... 107 2e-020
gb|DQ061057.1| Oryza sativa (japonica cultivar-group) alpha... 107 2e-020
gb|AACV01002595.1| Oryza sativa (japonica cultivar-group) c... 105 6e-020
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 105 6e-020
dbj|AP003348.3| Oryza sativa (japonica cultivar-group) geno... 105 6e-020
dbj|AP003230.4| Oryza sativa (japonica cultivar-group) geno... 105 6e-020
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 105 6e-020
gb|DQ061060.1| Oryza sativa (japonica cultivar-group) alpha... 101 9e-019
ref|NM_188792.1| Oryza sativa (japonica cultivar-group), p... 100 4e-018
gb|DQ061054.1| Oryza sativa (japonica cultivar-group) alpha... 100 4e-018
gb|AACV01003830.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
gb|AACV01003831.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
gb|DQ061064.1| Oryza sativa (japonica cultivar-group) alpha... 98 1e-017
gb|C91662.1|C91662 C91662 Rice panicle shorter than 3cm Ory... 96 6e-017
gb|AACV01006557.1| Oryza sativa (japonica cultivar-group) c... 96 6e-017
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 96 6e-017
gb|CA755804.1|CA755804 BR030028000_PLATE_G10_79_083.ab1 OA ... 94 2e-016
gb|DQ061061.1| Oryza sativa (japonica cultivar-group) alpha... 94 2e-016
gb|DQ061059.1| Oryza sativa (japonica cultivar-group) alpha... 92 9e-016
gb|C25149.1|C25149 C25149 Rice shoot Oryza sativa (japonica... 90 4e-015
gb|C91750.2|C91750 C91750 Rice panicle shorter than 3cm Ory... 90 4e-015
gb|AC087550.3| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
gb|AACV01021633.1| Oryza sativa (japonica cultivar-group) c... 88 1e-014
ref|NM_196687.1| Oryza sativa (japonica cultivar-group) put... 88 1e-014
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 88 1e-014
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
gb|DQ061067.1| Oryza sativa (japonica cultivar-group) alpha... 88 1e-014
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 88 1e-014
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
gb|C72427.1|C72427 C72427 Rice panicle at flowering stage O... 86 6e-014
dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA... 86 6e-014
dbj|AK111273.1| Oryza sativa (japonica cultivar-group) cDNA... 86 6e-014
gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic seque... 86 6e-014
gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 ... 86 6e-014
gb|AACV01000580.1| Oryza sativa (japonica cultivar-group) c... 86 6e-014
ref|XM_468791.1| Oryza sativa (japonica cultivar-group), mRNA 86 6e-014
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 86 6e-014
ref|NM_188790.1| Oryza sativa (japonica cultivar-group), p... 86 6e-014
dbj|AP002865.1| Oryza sativa (japonica cultivar-group) geno... 86 6e-014
gb|DQ061066.1| Oryza sativa (japonica cultivar-group) alpha... 86 6e-014
gb|D41768.1|D41768 RICS4567A Rice shoot Oryza sativa (japon... 84 2e-013
gb|AU222840.1|AU222840 AU222840 Rice shoot Oryza sativa (ja... 84 2e-013
emb|Y07782.1|OSEXPANSI Oryza sativa expansin (Os-EXP-1) mRN... 84 2e-013
dbj|AK069548.1| Oryza sativa (japonica cultivar-group) cDNA... 84 2e-013
ref|XM_474982.1| Oryza sativa (japonica cultivar-group), p... 84 2e-013
gb|AC105730.2| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|AC134233.3| Oryza sativa (japonica cultivar-group) chrom... 80 3e-012
gb|AACV01005896.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 80 3e-012
gb|AU031005.1|AU031005 AU031005 Rice cDNA from immature lea... 78 1e-011
ref|NM_196686.1| Oryza sativa (japonica cultivar-group) put... 78 1e-011
gb|D42004.1|D42004 RICS5074A Rice shoot Oryza sativa (japon... 76 5e-011
gb|AU030502.1|AU030502 AU030502 Rice cDNA from immature lea... 74 2e-010
gb|AACV01009919.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|DQ061056.1| Oryza sativa (japonica cultivar-group) alpha... 74 2e-010
gb|AACV01006963.1| Oryza sativa (japonica cultivar-group) c... 72 8e-010
gb|AACV01008335.1| Oryza sativa (japonica cultivar-group) c... 72 8e-010
ref|NT_107205.1| Oryza sativa (japonica cultivar-group) 72 8e-010
gb|CH401180.1| Oryza sativa (japonica cultivar-group) chrom... 72 8e-010
emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromoso... 72 8e-010
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 72 8e-010
gb|C25440.2|C25440 C25440 Rice shoot Oryza sativa (japonica... 70 3e-009
dbj|AB033663.1| Oryza sativa (japonica cultivar-group) DNA,... 70 3e-009
dbj|AP007206.1| Oryza sativa (japonica cultivar-group) chro... 70 3e-009
gb|AACV01019807.1| Oryza sativa (japonica cultivar-group) c... 70 3e-009
dbj|AP000616.2| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 70 3e-009
ref|NM_185356.1| Oryza sativa (japonica cultivar-group), mRNA 70 3e-009
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|DQ061058.1| Oryza sativa (japonica cultivar-group) alpha... 70 3e-009
gb|AU081601.1|AU081601 AU081601 Rice shoot Oryza sativa (ja... 68 1e-008
gb|AACV01005899.1| Oryza sativa (japonica cultivar-group) c... 66 5e-008
gb|DQ061065.1| Oryza sativa (japonica cultivar-group) alpha... 66 5e-008
gb|D41909.1|D41909 RICS4906A Rice shoot Oryza sativa (japon... 64 2e-007
gb|D49095.1|D49095 RICS15755A Rice green shoot Oryza sativa... 64 2e-007
ref|NM_197539.1| Oryza sativa (japonica cultivar-group) put... 64 2e-007
gb|D39861.1|D39861 RICS1496A Rice shoot Oryza sativa (japon... 62 8e-007
gb|AU078738.1|AU078738 AU078738 Rice shoot Oryza sativa (ja... 62 8e-007
gb|AQ578037.1|AQ578037 nbxb0092K21f CUGI Rice BAC Library O... 60 3e-006
gb|D39413.1|D39413 RICS0721A Rice shoot Oryza sativa (japon... 60 3e-006
gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05... 60 3e-006
gb|AC145273.2| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AACV01005898.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01009666.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01011535.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01014937.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01021998.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 60 3e-006
ref|NT_107197.1| Oryza sativa (japonica cultivar-group) 60 3e-006
ref|NT_107229.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|CH401200.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromoso... 60 3e-006
dbj|AK063455.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
gb|AACV01003833.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01005900.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|DQ061063.1| Oryza sativa (japonica cultivar-group) alpha... 58 1e-005
dbj|AK070505.1| Oryza sativa (japonica cultivar-group) cDNA... 56 5e-005
dbj|AP004587.3| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
dbj|AP005544.3| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
gb|AACV01018997.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
ref|XM_483792.1| Oryza sativa (japonica cultivar-group), mRNA 56 5e-005
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 56 5e-005
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
gb|D40257.1|D40257 RICS2106A Rice shoot Oryza sativa (japon... 54 2e-004
gb|D41340.1|D41340 RICS3803A Rice shoot Oryza sativa (japon... 52 8e-004
dbj|AP003938.1| Oryza sativa (japonica cultivar-group) chro... 52 8e-004
dbj|AK101940.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 52 8e-004
dbj|AP003539.3| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
gb|AACV01014579.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AU029531.1|AU029531 AU029531 Rice panicle shorter than 3... 50 0.003
gb|AU029532.1|AU029532 AU029532 Rice panicle shorter than 3... 50 0.003
dbj|AK066611.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK068088.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
ref|NM_197592.1| Oryza sativa (japonica cultivar-group) put... 50 0.003
gb|D23861.1|D23861 RICR0448A Rice root Oryza sativa (japoni... 48 0.012
gb|CV723142.1|CV723142 root--02-K01.g1 Rice root lambda pha... 48 0.012
dbj|AK060313.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
gb|AY427571.1| Oryza sativa (japonica cultivar-group) seed ... 48 0.012
dbj|AK071328.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.048
emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC O... 46 0.048
gb|U30479.1|OSU30479 Oryza sativa (japonica cultivar-group)... 46 0.048
gb|AY100692.1| Oryza sativa (japonica cultivar-group) alpha... 46 0.048
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 46 0.048
gb|AACV01025196.1| Oryza sativa (japonica cultivar-group) c... 46 0.048
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 46 0.048
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|C91869.1|C91869 C91869 Rice panicle shorter than 3cm Ory... 44 0.19
gb|AU172681.1|AU172681 AU172681 Rice panicle at flowering s... 44 0.19
>dbj|AK073572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E11, full
insert sequence
Length = 1416
Score = 809 bits (408), Expect = 0.0
Identities = 635/711 (89%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 245 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 304
Query: 224 gatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacagccaggggtac 283
|| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 305 gacgcgtcgggcaccatgggaggggcgtgcgggtacgggaacctctacagccaggggtac 364
Query: 284 ggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcagctgcggcgcc 343
|| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 365 gggacgaacacggcggcgctgagcacggcgctgttcaacaacggcctcagctgcggcgcg 424
Query: 344 tgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtctgccgggctcc 403
|||||||||||||| |||||||| | || ||||| ||| |||||| ||||| |||||
Sbjct: 425 tgcttcgaggtgcgctgcgacgccggcggcggcgggagccactcgtgcctgcccggctcg 484
Query: 404 gtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggc 463
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 485 gtcgtcgtcacggccaccaacttctgcccgccgaacaacgcgctcccgtccgacgacggc 544
Query: 464 ggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatc 523
|||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 545 ggctggtgcaaccctccgcgcgcgcacttcgacatgtcccagcccgtcttccagcgcatc 604
Query: 524 gcgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaag 583
|| |||| || |||||||||||| ||||||||||||||| |||| || ||| | ||||||
Sbjct: 605 gctctcttcaaggccggcattgtccccgtctcctaccgccgggtggcttgccagaagaag 664
Query: 584 ggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaac 643
||||| || || |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 665 ggcgggatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaac 724
Query: 644 gtggaaggcgccggcgacgtgcacgcggttgccgtgaaggccgaccgctcccccgggtgg 703
|||| ||||||||||||||||||||||| ||||||||| | || ||||| | | ||||
Sbjct: 725 gtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcggcgtgg 784
Query: 704 caggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcag 763
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| |||
Sbjct: 785 caggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcgacggtcag 844
Query: 764 gccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgcc 823
|| || |||||||||||||||||| |||||||||||||||| ||||||||||||||| |
Sbjct: 845 gcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaacgccgtc 904
Query: 824 ccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 874
||||| |||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 905 ccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 955
>ref|XM_467754.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1289
Score = 809 bits (408), Expect = 0.0
Identities = 635/711 (89%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 240 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 299
Query: 224 gatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacagccaggggtac 283
|| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 300 gacgcgtcgggcaccatgggaggggcgtgcgggtacgggaacctctacagccaggggtac 359
Query: 284 ggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcagctgcggcgcc 343
|| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 360 gggacgaacacggcggcgctgagcacggcgctgttcaacaacggcctcagctgcggcgcg 419
Query: 344 tgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtctgccgggctcc 403
|||||||||||||| |||||||| | || ||||| ||| |||||| ||||| |||||
Sbjct: 420 tgcttcgaggtgcgctgcgacgccggcggcggcgggagccactcgtgcctgcccggctcg 479
Query: 404 gtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggc 463
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 480 gtcgtcgtcacggccaccaacttctgcccgccgaacaacgcgctcccgtccgacgacggc 539
Query: 464 ggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatc 523
|||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 540 ggctggtgcaaccctccgcgcgcgcacttcgacatgtcccagcccgtcttccagcgcatc 599
Query: 524 gcgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaag 583
|| |||| || |||||||||||| ||||||||||||||| |||| || ||| | ||||||
Sbjct: 600 gctctcttcaaggccggcattgtccccgtctcctaccgccgggtggcttgccagaagaag 659
Query: 584 ggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaac 643
||||| || || |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 660 ggcgggatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaac 719
Query: 644 gtggaaggcgccggcgacgtgcacgcggttgccgtgaaggccgaccgctcccccgggtgg 703
|||| ||||||||||||||||||||||| ||||||||| | || ||||| | | ||||
Sbjct: 720 gtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcggcgtgg 779
Query: 704 caggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcag 763
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| |||
Sbjct: 780 caggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcgacggtcag 839
Query: 764 gccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgcc 823
|| || |||||||||||||||||| |||||||||||||||| ||||||||||||||| |
Sbjct: 840 gcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaacgccgtc 899
Query: 824 ccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 874
||||| |||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 900 ccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 950
>ref|XM_506968.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.30
mRNA
Length = 1417
Score = 809 bits (408), Expect = 0.0
Identities = 635/711 (89%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 246 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 305
Query: 224 gatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacagccaggggtac 283
|| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 306 gacgcgtcgggcaccatgggaggggcgtgcgggtacgggaacctctacagccaggggtac 365
Query: 284 ggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcagctgcggcgcc 343
|| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 366 gggacgaacacggcggcgctgagcacggcgctgttcaacaacggcctcagctgcggcgcg 425
Query: 344 tgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtctgccgggctcc 403
|||||||||||||| |||||||| | || ||||| ||| |||||| ||||| |||||
Sbjct: 426 tgcttcgaggtgcgctgcgacgccggcggcggcgggagccactcgtgcctgcccggctcg 485
Query: 404 gtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggc 463
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 486 gtcgtcgtcacggccaccaacttctgcccgccgaacaacgcgctcccgtccgacgacggc 545
Query: 464 ggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatc 523
|||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 546 ggctggtgcaaccctccgcgcgcgcacttcgacatgtcccagcccgtcttccagcgcatc 605
Query: 524 gcgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaag 583
|| |||| || |||||||||||| ||||||||||||||| |||| || ||| | ||||||
Sbjct: 606 gctctcttcaaggccggcattgtccccgtctcctaccgccgggtggcttgccagaagaag 665
Query: 584 ggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaac 643
||||| || || |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 666 ggcgggatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaac 725
Query: 644 gtggaaggcgccggcgacgtgcacgcggttgccgtgaaggccgaccgctcccccgggtgg 703
|||| ||||||||||||||||||||||| ||||||||| | || ||||| | | ||||
Sbjct: 726 gtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcggcgtgg 785
Query: 704 caggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcag 763
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| |||
Sbjct: 786 caggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcgacggtcag 845
Query: 764 gccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgcc 823
|| || |||||||||||||||||| |||||||||||||||| ||||||||||||||| |
Sbjct: 846 gcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaacgccgtc 905
Query: 824 ccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 874
||||| |||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 906 ccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 956
>dbj|AK107334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-F08, full
insert sequence
Length = 1290
Score = 801 bits (404), Expect = 0.0
Identities = 634/711 (89%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 240 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 299
Query: 224 gatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacagccaggggtac 283
|| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 300 gacgcgtcgggcaccatgggaggggcgtgcgggtacgggaacctctacagccaggggtac 359
Query: 284 ggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcagctgcggcgcc 343
|| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 360 gggacgaacacggcggcgctgagcacggcgctgttcaacaacggcctcagctgcggcgcg 419
Query: 344 tgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtctgccgggctcc 403
|||||||||||||| |||||||| | || ||||| ||| |||||| ||||| |||||
Sbjct: 420 tgcttcgaggtgcgctgcgacgccggcggcggcgggagccactcgtgcctgcccggctcg 479
Query: 404 gtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggc 463
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 480 gtcgtcgtcacggccaccaacttctgcccgccgaacaacgcgctcccgtccgacgacggc 539
Query: 464 ggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatc 523
||| |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 540 ggccggtgcaaccctccgcgcgcgcacttcgacatgtcccagcccgtcttccagcgcatc 599
Query: 524 gcgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaag 583
|| |||| || |||||||||||| ||||||||||||||| |||| || ||| | ||||||
Sbjct: 600 gctctcttcaaggccggcattgtccccgtctcctaccgccgggtggcttgccagaagaag 659
Query: 584 ggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaac 643
||||| || || |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 660 ggcgggatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaac 719
Query: 644 gtggaaggcgccggcgacgtgcacgcggttgccgtgaaggccgaccgctcccccgggtgg 703
|||| ||||||||||||||||||||||| ||||||||| | || ||||| | | ||||
Sbjct: 720 gtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcggcgtgg 779
Query: 704 caggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcag 763
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| |||
Sbjct: 780 caggccctgtcgcgcaactggggccagaactggcagagcgccgcgctcctcgacggtcag 839
Query: 764 gccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgcc 823
|| || |||||||||||||||||| |||||||||||||||| ||||||||||||||| |
Sbjct: 840 gcgctctccttccgcgtcaccaccggcgacggccgctccgtcgtctccaacaacgccgtc 899
Query: 824 ccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 874
||||| |||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 900 ccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 950
>gb|CB645779.1|CB645779 OSJNEb07L24.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07L24 5', mRNA sequence
Length = 838
Score = 684 bits (345), Expect = 0.0
Identities = 554/624 (88%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 214 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 273
Query: 224 gatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacagccaggggtac 283
|| ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 274 gacgcgtcgggcaccatgggaggggcgtgcgggtacgggaacctctacagccaggggtac 333
Query: 284 ggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcagctgcggcgcc 343
|| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 334 gggacgaacacggcggcgctgagcacggcgctgttcaacaacggcctcagctgcggcgcg 393
Query: 344 tgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtctgccgggctcc 403
|||||||||||||| |||||||| | || ||||| ||| |||||| ||||| |||||
Sbjct: 394 tgcttcgaggtgcgctgcgacgccggcggcggcgggagccactcgtgcctgcccggctcg 453
Query: 404 gtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggc 463
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 454 gtcgtcgtcacggccaccaacttctgcccgccgaacaacgcgctcccgtccgacgacggc 513
Query: 464 ggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatc 523
|||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 514 ggctggtgcaaccctccgcgcgcgcacttcgacatgtcccagcccgtcttccagcgcatc 573
Query: 524 gcgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaag 583
|| |||| || |||||||||||| ||||||||||||||| |||| || ||| | ||||||
Sbjct: 574 gctctcttcaaggccggcattgtccccgtctcctaccgccgggtggcttgccagaagaag 633
Query: 584 ggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaac 643
||||| || || |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 634 ggcgggatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaac 693
Query: 644 gtggaaggcgccggcgacgtgcacgcggttgccgtgaaggccgaccgctcccccgggtgg 703
|||| ||||||||||||||||||||||| ||||||||| | || ||||| | | ||||
Sbjct: 694 gtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcggcgtgg 753
Query: 704 caggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcag 763
||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||| |||
Sbjct: 754 caggccctgtcgcgcaactggggtcagaactggcagagcgccgcgctcctcgacggtcag 813
Query: 764 gccctgtccttccgcgtcaccacc 787
|| || ||||| ||||||||||||
Sbjct: 814 gcgctctcctttcgcgtcaccacc 837
>gb|AACV01005399.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005399, whole
genome shotgun sequence
Length = 41834
Score = 402 bits (203), Expect = e-109
Identities = 289/318 (90%)
Strand = Plus / Plus
Query: 245 ggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctg 304
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 20877 ggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctg 20936
Query: 305 agcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcgac 364
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 20937 agcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgac 20996
Query: 365 gcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccaccaac 424
|| | || ||||| ||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 20997 gccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaac 21056
Query: 425 ttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccgcgc 484
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 21057 ttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgc 21116
Query: 485 gcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggcatt 544
|| |||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||
Sbjct: 21117 gcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcatt 21176
Query: 545 gttcccgtctcctaccgc 562
|| |||||||||||||||
Sbjct: 21177 gtccccgtctcctaccgc 21194
Score = 353 bits (178), Expect = 2e-094
Identities = 280/314 (89%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| || ||| | ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 21289 gcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctact 21348
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 21349 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 21408
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
|| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21409 agtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcaga 21468
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|| | ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 21469 gcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgct 21528
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
|||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |
Sbjct: 21529 ccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcgggg 21588
Query: 861 cccagttcaactga 874
||||||||||||||
Sbjct: 21589 cccagttcaactga 21602
Score = 71.9 bits (36), Expect = 8e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 20702 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 20761
Query: 224 gatgcgtccggcaccatggg 243
|| ||||| |||||||||||
Sbjct: 20762 gacgcgtcgggcaccatggg 20781
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 402 bits (203), Expect = e-109
Identities = 289/318 (90%)
Strand = Plus / Plus
Query: 245 ggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctg 304
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 6404478 ggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctg 6404537
Query: 305 agcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcgac 364
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 6404538 agcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgac 6404597
Query: 365 gcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccaccaac 424
|| | || ||||| ||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 6404598 gccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaac 6404657
Query: 425 ttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccgcgc 484
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 6404658 ttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgc 6404717
Query: 485 gcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggcatt 544
|| |||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||
Sbjct: 6404718 gcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcatt 6404777
Query: 545 gttcccgtctcctaccgc 562
|| |||||||||||||||
Sbjct: 6404778 gtccccgtctcctaccgc 6404795
Score = 353 bits (178), Expect = 2e-094
Identities = 280/314 (89%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| || ||| | ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 6404890 gcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctact 6404949
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 6404950 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 6405009
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
|| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6405010 agtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcaga 6405069
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|| | ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 6405070 gcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgct 6405129
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
|||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |
Sbjct: 6405130 ccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcgggg 6405189
Query: 861 cccagttcaactga 874
||||||||||||||
Sbjct: 6405190 cccagttcaactga 6405203
Score = 71.9 bits (36), Expect = 8e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 6404303 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 6404362
Query: 224 gatgcgtccggcaccatggg 243
|| ||||| |||||||||||
Sbjct: 6404363 gacgcgtcgggcaccatggg 6404382
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1118_G04
Length = 134464
Score = 402 bits (203), Expect = e-109
Identities = 289/318 (90%)
Strand = Plus / Plus
Query: 245 ggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctg 304
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 9347 ggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctg 9406
Query: 305 agcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcgac 364
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 9407 agcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgac 9466
Query: 365 gcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccaccaac 424
|| | || ||||| ||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 9467 gccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaac 9526
Query: 425 ttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccgcgc 484
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 9527 ttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgc 9586
Query: 485 gcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggcatt 544
|| |||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||
Sbjct: 9587 gcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcatt 9646
Query: 545 gttcccgtctcctaccgc 562
|| |||||||||||||||
Sbjct: 9647 gtccccgtctcctaccgc 9664
Score = 353 bits (178), Expect = 2e-094
Identities = 280/314 (89%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| || ||| | ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 9759 gcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctact 9818
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 9819 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 9878
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
|| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9879 agtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcaga 9938
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|| | ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 9939 gcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgct 9998
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
|||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |
Sbjct: 9999 ccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcgggg 10058
Query: 861 cccagttcaactga 874
||||||||||||||
Sbjct: 10059 cccagttcaactga 10072
Score = 71.9 bits (36), Expect = 8e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 9172 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 9231
Query: 224 gatgcgtccggcaccatggg 243
|| ||||| |||||||||||
Sbjct: 9232 gacgcgtcgggcaccatggg 9251
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1734_E02
Length = 168566
Score = 402 bits (203), Expect = e-109
Identities = 289/318 (90%)
Strand = Plus / Plus
Query: 245 ggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctg 304
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 119322 ggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctg 119381
Query: 305 agcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcgac 364
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 119382 agcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgac 119441
Query: 365 gcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccaccaac 424
|| | || ||||| ||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 119442 gccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaac 119501
Query: 425 ttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccgcgc 484
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 119502 ttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgc 119561
Query: 485 gcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggcatt 544
|| |||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||
Sbjct: 119562 gcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcatt 119621
Query: 545 gttcccgtctcctaccgc 562
|| |||||||||||||||
Sbjct: 119622 gtccccgtctcctaccgc 119639
Score = 353 bits (178), Expect = 2e-094
Identities = 280/314 (89%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| || ||| | ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 119734 gcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctact 119793
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 119794 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 119853
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
|| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 119854 agtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcaga 119913
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|| | ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 119914 gcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgct 119973
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
|||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |
Sbjct: 119974 ccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcgggg 120033
Query: 861 cccagttcaactga 874
||||||||||||||
Sbjct: 120034 cccagttcaactga 120047
Score = 71.9 bits (36), Expect = 8e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 119147 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 119206
Query: 224 gatgcgtccggcaccatggg 243
|| ||||| |||||||||||
Sbjct: 119207 gacgcgtcgggcaccatggg 119226
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 402 bits (203), Expect = e-109
Identities = 289/318 (90%)
Strand = Plus / Plus
Query: 245 ggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctg 304
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 17795642 ggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctg 17795701
Query: 305 agcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcgac 364
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 17795702 agcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgac 17795761
Query: 365 gcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccaccaac 424
|| | || ||||| ||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 17795762 gccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaac 17795821
Query: 425 ttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccgcgc 484
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 17795822 ttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgc 17795881
Query: 485 gcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggcatt 544
|| |||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||
Sbjct: 17795882 gcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcatt 17795941
Query: 545 gttcccgtctcctaccgc 562
|| |||||||||||||||
Sbjct: 17795942 gtccccgtctcctaccgc 17795959
Score = 353 bits (178), Expect = 2e-094
Identities = 280/314 (89%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| || ||| | ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 17796054 gcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctact 17796113
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 17796114 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 17796173
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
|| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 17796174 agtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcaga 17796233
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|| | ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 17796234 gcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgct 17796293
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
|||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |
Sbjct: 17796294 ccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcgggg 17796353
Query: 861 cccagttcaactga 874
||||||||||||||
Sbjct: 17796354 cccagttcaactga 17796367
Score = 71.9 bits (36), Expect = 8e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 17795467 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 17795526
Query: 224 gatgcgtccggcaccatggg 243
|| ||||| |||||||||||
Sbjct: 17795527 gacgcgtcgggcaccatggg 17795546
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 402 bits (203), Expect = e-109
Identities = 289/318 (90%)
Strand = Plus / Plus
Query: 245 ggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctg 304
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 31248706 ggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctg 31248765
Query: 305 agcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcgac 364
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 31248766 agcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgac 31248825
Query: 365 gcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccaccaac 424
|| | || ||||| ||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 31248826 gccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaac 31248885
Query: 425 ttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccgcgc 484
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 31248886 ttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgc 31248945
Query: 485 gcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggcatt 544
|| |||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||
Sbjct: 31248946 gcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcatt 31249005
Query: 545 gttcccgtctcctaccgc 562
|| |||||||||||||||
Sbjct: 31249006 gtccccgtctcctaccgc 31249023
Score = 353 bits (178), Expect = 2e-094
Identities = 280/314 (89%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| || ||| | ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 31249118 gcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctact 31249177
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 31249178 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 31249237
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
|| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 31249238 agtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcaga 31249297
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|| | ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 31249298 gcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgct 31249357
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
|||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |
Sbjct: 31249358 ccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcgggg 31249417
Query: 861 cccagttcaactga 874
||||||||||||||
Sbjct: 31249418 cccagttcaactga 31249431
Score = 119 bits (60), Expect = 4e-024
Identities = 114/132 (86%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| || ||||||||||||||||| ||||||
Sbjct: 9614871 cacgcgacgttctacggcggcgcggacgcgtcgggaaccatgggcggggcgtgcgggtac 9614930
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| ||| |||||||||||||| | ||||||||||| ||||||||||| |||
Sbjct: 9614931 ggcaacctgtacgcgcaggggtacggcacgaggacggcggcgctcagcacggcgctgttc 9614990
Query: 320 aacaacggcctc 331
||| ||||||||
Sbjct: 9614991 aacgacggcctc 9615002
Score = 97.6 bits (49), Expect = 1e-017
Identities = 109/129 (84%)
Strand = Plus / Minus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| |||||||||||||||||||| || |||
Sbjct: 9648461 cacgcgacgttctacggcggcgcggacgcgtcgggcaccatgggcggggcgtgcggatac 9648402
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| ||| |||||||||||||| | |||||||||||||||||||| |||
Sbjct: 9648401 ggcaacctgtactcgcaggggtacggcacgcggaacgcggcgctgagcacggcgctgttc 9648342
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9648341 aacgacggc 9648333
Score = 97.6 bits (49), Expect = 1e-017
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| |||||||||||||||||||| || |||
Sbjct: 9638616 cacgcgacgttctacggcggcgcggacgcgtcgggcaccatgggcggggcgtgcggatac 9638675
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| ||| |||||||||||||| | |||||||||||||||||||| |||
Sbjct: 9638676 ggcaacctgtactcgcaggggtacggcacgcggaacgcggcgctgagcacggcgctgttc 9638735
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9638736 aacgacggc 9638744
Score = 85.7 bits (43), Expect = 6e-014
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
|||||||||||||||||||||||| | ||||| |||| ||||||||||||||||
Sbjct: 9615087 gccaccaacttctgcccgcccaactgggacctccccagcgacagcggcggctggtgcaac 9615146
Query: 476 ccgccgcgcgcccacttcgacatgtcgcagcccg 509
||||||||| |||||||||||||| | |||||||
Sbjct: 9615147 ccgccgcgcccccacttcgacatggcccagcccg 9615180
Score = 73.8 bits (37), Expect = 2e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
|||||||||||||||||||||||| ||||| |||| |||||||||||||||||
Sbjct: 9634960 gccaccaacttctgcccgcccaactggaacctccccagcgacaacggcggctggtgcaac 9635019
Query: 476 ccgccgcgcgcccacttcgacatgtcgcagcc 507
|||||||| | |||||||||||| |||||||
Sbjct: 9635020 ccgccgcggccgcacttcgacatggcgcagcc 9635051
Score = 71.9 bits (36), Expect = 8e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 31248531 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 31248590
Query: 224 gatgcgtccggcaccatggg 243
|| ||||| |||||||||||
Sbjct: 31248591 gacgcgtcgggcaccatggg 31248610
Score = 65.9 bits (33), Expect = 5e-008
Identities = 105/129 (81%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||| | || ||||| |||||||||||||||||||| || |||
Sbjct: 9634744 cacgcgacgttctacggcggggcggacgcgtcgggcaccatgggcggggcgtgcggctac 9634803
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
| | |||| ||| ||||||||||| || | |||||||||||||||||||| |||
Sbjct: 9634804 gtcgacctgtactcgcaggggtacgggacgcggaacgcggcgctgagcacggcgctgttc 9634863
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9634864 aacgacggc 9634872
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Minus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| ||||||||||| || ||||| || |||
Sbjct: 9661650 cacgcgacgttctacggcggcgcggacgcgtcgggcaccatgggaggcgcgtgcggctac 9661591
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
||| |||| ||| |||||||| || || | |||||||||||||||||||| |||
Sbjct: 9661590 ggcgacctttactcgcaggggtatgggacgcggaacgcggcgctgagcacggcgctgttc 9661531
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9661530 aacgacggc 9661522
Score = 58.0 bits (29), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
|||||||||||||||||||||||| | ||||| |||| |||||||||||||||||
Sbjct: 9661434 gccaccaacttctgcccgcccaactgggacctccccagcgacaacggcggctggtgcaac 9661375
Query: 476 ccgccgcgcgcccacttcgacatgtcgcagcc 507
|| || || | |||||||| ||| |||||||
Sbjct: 9661374 cctccacggccgcacttcgatatggcgcagcc 9661343
Score = 48.1 bits (24), Expect = 0.012
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
|||||||| ||| | || |||||||| ||||| ||| ||||||| | || |||||||||
Sbjct: 9647975 aagaagggtggcctgcggttcaccattaacggtcacgactacttccagctagtactggtg 9647916
Query: 638 accaacgt 645
||||||||
Sbjct: 9647915 accaacgt 9647908
Score = 48.1 bits (24), Expect = 0.012
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
|||||||| ||| | || |||||||| ||||| ||| ||||||| | || |||||||||
Sbjct: 9639102 aagaagggtggcctgcggttcaccattaacggtcacgactacttccagctagtactggtg 9639161
Query: 638 accaacgt 645
||||||||
Sbjct: 9639162 accaacgt 9639169
Score = 48.1 bits (24), Expect = 0.012
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
||||||||||| | || |||||||||||||| ||| ||||||| | ||||| ||| ||
Sbjct: 9615689 aagaagggcggggtgcggttcaccatcaacgggcacgactacttccagctggtgctgctg 9615748
Query: 638 accaacgt 645
||||||||
Sbjct: 9615749 accaacgt 9615756
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 402 bits (203), Expect = e-109
Identities = 289/318 (90%)
Strand = Plus / Plus
Query: 245 ggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctg 304
|||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 31239479 ggggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgctg 31239538
Query: 305 agcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcgac 364
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 31239539 agcacggcgctgttcaacaacggcctcagctgcggcgcgtgcttcgaggtgcgctgcgac 31239598
Query: 365 gcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccaccaac 424
|| | || ||||| ||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 31239599 gccggcggcggcgggagccactcgtgcctgcccggctcggtcgtcgtcacggccaccaac 31239658
Query: 425 ttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccgcgc 484
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 31239659 ttctgcccgccgaacaacgcgctcccgtccgacgacggcggctggtgcaaccctccgcgc 31239718
Query: 485 gcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggcatt 544
|| |||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||
Sbjct: 31239719 gcgcacttcgacatgtcccagcccgtcttccagcgcatcgctctcttcaaggccggcatt 31239778
Query: 545 gttcccgtctcctaccgc 562
|| |||||||||||||||
Sbjct: 31239779 gtccccgtctcctaccgc 31239796
Score = 353 bits (178), Expect = 2e-094
Identities = 280/314 (89%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| || ||| | ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 31239891 gcagggtggcttgccagaagaagggcgggatccggttcaccatcaacgggcactcctact 31239950
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 31239951 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 31240010
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
|| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 31240011 agtcggagcgctcggcggcgtggcaggccctgtcgcgcaactggggccagaactggcaga 31240070
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|| | ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 31240071 gcgccgcgctcctcgacggtcaggcgctctccttccgcgtcaccaccggcgacggccgct 31240130
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
|||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |
Sbjct: 31240131 ccgtcgtctccaacaacgccgtcccccgtggctggtccttcggccagaccttcagcgggg 31240190
Query: 861 cccagttcaactga 874
||||||||||||||
Sbjct: 31240191 cccagttcaactga 31240204
Score = 119 bits (60), Expect = 4e-024
Identities = 114/132 (86%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| || ||||||||||||||||| ||||||
Sbjct: 9551161 cacgcgacgttctacggcggcgcggacgcgtcgggaaccatgggcggggcgtgcgggtac 9551220
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| ||| |||||||||||||| | ||||||||||| ||||||||||| |||
Sbjct: 9551221 ggcaacctgtacgcgcaggggtacggcacgaggacggcggcgctcagcacggcgctgttc 9551280
Query: 320 aacaacggcctc 331
||| ||||||||
Sbjct: 9551281 aacgacggcctc 9551292
Score = 97.6 bits (49), Expect = 1e-017
Identities = 109/129 (84%)
Strand = Plus / Minus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| |||||||||||||||||||| || |||
Sbjct: 9589012 cacgcgacgttctacggcggcgcggacgcgtcgggcaccatgggcggggcgtgcggatac 9588953
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| ||| |||||||||||||| | |||||||||||||||||||| |||
Sbjct: 9588952 ggcaacctgtactcgcaggggtacggcacgcggaacgcggcgctgagcacggcgctgttc 9588893
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9588892 aacgacggc 9588884
Score = 97.6 bits (49), Expect = 1e-017
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| |||||||||||||||||||| || |||
Sbjct: 9577682 cacgcgacgttctacggcggcgcggacgcgtcgggcaccatgggcggggcgtgcggatac 9577741
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| ||| |||||||||||||| | |||||||||||||||||||| |||
Sbjct: 9577742 ggcaacctgtactcgcaggggtacggcacgcggaacgcggcgctgagcacggcgctgttc 9577801
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9577802 aacgacggc 9577810
Score = 85.7 bits (43), Expect = 6e-014
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
|||||||||||||||||||||||| | ||||| |||| ||||||||||||||||
Sbjct: 9551377 gccaccaacttctgcccgcccaactgggacctccccagcgacagcggcggctggtgcaac 9551436
Query: 476 ccgccgcgcgcccacttcgacatgtcgcagcccg 509
||||||||| |||||||||||||| | |||||||
Sbjct: 9551437 ccgccgcgcccccacttcgacatggcccagcccg 9551470
Score = 73.8 bits (37), Expect = 2e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
|||||||||||||||||||||||| ||||| |||| |||||||||||||||||
Sbjct: 9574026 gccaccaacttctgcccgcccaactggaacctccccagcgacaacggcggctggtgcaac 9574085
Query: 476 ccgccgcgcgcccacttcgacatgtcgcagcc 507
|||||||| | |||||||||||| |||||||
Sbjct: 9574086 ccgccgcggccgcacttcgacatggcgcagcc 9574117
Score = 73.8 bits (37), Expect = 2e-010
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| ||| ||||| ||||||||||| || | ||| |||||
Sbjct: 9568886 cacgcgacgttctacggcggcgccgacgcgtcgggcaccatgggaggcgggtgcgggtat 9568945
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
||| |||| ||| |||||||||||||| | |||||||||||||||||||| |||
Sbjct: 9568946 ggcgacctgtactcgcaggggtacggcacgcggaacgcggcgctgagcacggcgctgttc 9569005
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9569006 aacgacggc 9569014
Score = 71.9 bits (36), Expect = 8e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 164 cacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttctacggcggcggc 223
||||| |||||||| || |||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct: 31239304 cacgcgccgctcggcggcggcgggtggtcgtcggcgcacgccacgttctacggcgggggt 31239363
Query: 224 gatgcgtccggcaccatggg 243
|| ||||| |||||||||||
Sbjct: 31239364 gacgcgtcgggcaccatggg 31239383
Score = 65.9 bits (33), Expect = 5e-008
Identities = 105/129 (81%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||| | || ||||| |||||||||||||||||||| || |||
Sbjct: 9573810 cacgcgacgttctacggcggggcggacgcgtcgggcaccatgggcggggcgtgcggctac 9573869
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
| | |||| ||| ||||||||||| || | |||||||||||||||||||| |||
Sbjct: 9573870 gtcgacctgtactcgcaggggtacgggacgcggaacgcggcgctgagcacggcgctgttc 9573929
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9573930 aacgacggc 9573938
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Minus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
||||| || ||||||||||||| || ||||| ||||||||||| || ||||| || |||
Sbjct: 9600194 cacgcgacgttctacggcggcgcggacgcgtcgggcaccatgggaggcgcgtgcggctac 9600135
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
||| |||| ||| |||||||| || || | |||||||||||||||||||| |||
Sbjct: 9600134 ggcgacctttactcgcaggggtatgggacgcggaacgcggcgctgagcacggcgctgttc 9600075
Query: 320 aacaacggc 328
||| |||||
Sbjct: 9600074 aacgacggc 9600066
Score = 58.0 bits (29), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
|||||||||||||||||||||||| | ||||| |||| |||||||||||||||||
Sbjct: 9599978 gccaccaacttctgcccgcccaactgggacctccccagcgacaacggcggctggtgcaac 9599919
Query: 476 ccgccgcgcgcccacttcgacatgtcgcagcc 507
|| || || | |||||||| ||| |||||||
Sbjct: 9599918 cctccacggccgcacttcgatatggcgcagcc 9599887
Score = 58.0 bits (29), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
|||||||||||||||||||||||| | || || |||| | || ||||||||||||
Sbjct: 9569102 gccaccaacttctgcccgcccaactgggacctgcccagcgacaatggtggctggtgcaac 9569161
Query: 476 ccgccgcgcgcccacttcgacatgtcgcagcc 507
|||||||| | |||||||||||| |||||||
Sbjct: 9569162 ccgccgcggccgcacttcgacatggcgcagcc 9569193
Score = 48.1 bits (24), Expect = 0.012
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
|||||||| ||| | || |||||||| ||||| ||| ||||||| | || |||||||||
Sbjct: 9588526 aagaagggtggcctgcggttcaccattaacggtcacgactacttccagctagtactggtg 9588467
Query: 638 accaacgt 645
||||||||
Sbjct: 9588466 accaacgt 9588459
Score = 48.1 bits (24), Expect = 0.012
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
|||||||| ||| | || |||||||| ||||| ||| ||||||| | || |||||||||
Sbjct: 9578168 aagaagggtggcctgcggttcaccattaacggtcacgactacttccagctagtactggtg 9578227
Query: 638 accaacgt 645
||||||||
Sbjct: 9578228 accaacgt 9578235
Score = 48.1 bits (24), Expect = 0.012
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
||||||||||| | || |||||||||||||| ||| ||||||| | ||||| ||| ||
Sbjct: 9551979 aagaagggcggggtgcggttcaccatcaacgggcacgactacttccagctggtgctgctg 9552038
Query: 638 accaacgt 645
||||||||
Sbjct: 9552039 accaacgt 9552046
>gb|CB645780.1|CB645780 OSJNEb07L24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07L24 3', mRNA sequence
Length = 735
Score = 327 bits (165), Expect = 9e-087
Identities = 264/297 (88%)
Strand = Plus / Minus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
|||||||||| || || |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 727 aagaagggcgtgatccggttcaccatcaacgggcactcatacttcaacctggtgctggtg 668
Query: 638 accaacgtggaaggcgccggcgacgtgcacgcggttgccgtgaaggccgaccgctccccc 697
|||||||||| ||||||||||||||||||||||| ||||||||| | || ||||| |
Sbjct: 667 accaacgtgggcggcgccggcgacgtgcacgcggtggccgtgaagtcggagcgctcggcg 608
Query: 698 gggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggac 757
| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||
Sbjct: 607 gcgtggcaggccctgtcgcgcaactggggccagaactggcagagcgccgcgctccttgac 548
Query: 758 gggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaac 817
|| ||||| || |||||||||||||||||| | |||||||||||||| |||||||||||
Sbjct: 547 ggtcaggcgctctccttccgcgtcaccaccggtgacggccgctccgtcgtctccaacaac 488
Query: 818 gccgccccccgcggctggtctttcggccagactttcagcggtgcccagttcaactga 874
|||| |||||| |||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 487 gccgtcccccgtggctggtccttcggccagaccttcagcggggcccagttcaactga 431
>ref|XM_470717.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 795
Score = 196 bits (99), Expect = 2e-047
Identities = 236/282 (83%)
Strand = Plus / Plus
Query: 405 tcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcg 464
||||||||||||||||| || | |||||| ||||| |||||||||| |||| |||||
Sbjct: 320 tcgtggtgacggccaccgacctgtgcccggccaaccacgcgctccccggcgaccgcggcg 379
Query: 465 gctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcg 524
|||||||||||||||||| | |||||||||| | || ||||||| |||| |||||||
Sbjct: 380 gctggtgcaacccgccgctccaccacttcgacctctcccagcccgccttcctccgcatcg 439
Query: 525 cgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagg 584
| | || | | ||||||| || ||||||||||||||| |||| |||||| | |||||
Sbjct: 440 cccgcttccagtccggcatcgtccccgtctcctaccgccgggtggcgtgccggaggaagg 499
Query: 585 gcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacg 644
| || || | |||||||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 500 gagggatgaggttcaccatcaacgggcactcctacttcaacctggtgctggtgagcaacg 559
Query: 645 tggaaggcgccggcgacgtgcacgcggttgccgtgaaggccg 686
||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 560 tgggcggcgccggcgacgtgcacgcggtggcggtgaaggccg 601
Score = 125 bits (63), Expect = 6e-026
Identities = 138/163 (84%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||||||||||||||||| ||| || |||||||||||||| || ||||| ||||||
Sbjct: 100 cacgccaccttctacggcggcgccgacgcctccggcaccatgggtggcgcgtgcgggtac 159
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| ||| | |||||||||||||| ||||||||||||||||| ||| | | |||
Sbjct: 160 gggaacacgtacgggcaggggtacggcacggacacggcggcgctgagcgcggtgatgttc 219
Query: 320 aacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcg 362
|||| || ||||||||||||||||||||| |||||||||
Sbjct: 220 ggggacgggctgagctgcggcgcctgcttcgagctgcggtgcg 262
Score = 67.9 bits (34), Expect = 1e-008
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 699 ggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacg 758
||||||||||| || || | |||||||||||||||||||||||| | |||| || ||||
Sbjct: 620 ggtggcaggccatggcgaggaactggggccagaactggcagagcggcgcgctgctcgacg 679
Query: 759 ggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgt 804
||||||| ||||| ||| || |||||| ||||| |||| |||||
Sbjct: 680 ggcaggcgctgtcgttcacggtgaccaccggcgaccgccgatccgt 725
>gb|DQ061062.1| Oryza sativa (japonica cultivar-group) alpha-expansin 21 (EXPA21)
mRNA, partial cds
Length = 727
Score = 196 bits (99), Expect = 2e-047
Identities = 236/282 (83%)
Strand = Plus / Plus
Query: 405 tcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcg 464
||||||||||||||||| || | |||||| ||||| |||||||||| |||| |||||
Sbjct: 297 tcgtggtgacggccaccgacctgtgcccggccaaccacgcgctccccggcgaccgcggcg 356
Query: 465 gctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcg 524
|||||||||||||||||| | |||||||||| | || ||||||| |||| |||||||
Sbjct: 357 gctggtgcaacccgccgctccaccacttcgacctctcccagcccgccttcctccgcatcg 416
Query: 525 cgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagg 584
| | || | | ||||||| || ||||||||||||||| |||| |||||| | |||||
Sbjct: 417 cccgcttccagtccggcatcgtccccgtctcctaccgccgggtggcgtgccggaggaagg 476
Query: 585 gcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacg 644
| || || | |||||||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 477 gagggatgaggttcaccatcaacgggcactcctacttcaacctggtgctggtgagcaacg 536
Query: 645 tggaaggcgccggcgacgtgcacgcggttgccgtgaaggccg 686
||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 537 tgggcggcgccggcgacgtgcacgcggtggcggtgaaggccg 578
Score = 125 bits (63), Expect = 6e-026
Identities = 138/163 (84%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||||||||||||||||| ||| || |||||||||||||| || ||||| ||||||
Sbjct: 77 cacgccaccttctacggcggcgccgacgcctccggcaccatgggtggcgcgtgcgggtac 136
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| ||| | |||||||||||||| ||||||||||||||||| ||| | | |||
Sbjct: 137 gggaacacgtacgggcaggggtacggcacggacacggcggcgctgagcgcggtgatgttc 196
Query: 320 aacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcg 362
|||| || ||||||||||||||||||||| |||||||||
Sbjct: 197 ggggacgggctgagctgcggcgcctgcttcgagctgcggtgcg 239
Score = 67.9 bits (34), Expect = 1e-008
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 699 ggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacg 758
||||||||||| || || | |||||||||||||||||||||||| | |||| || ||||
Sbjct: 597 ggtggcaggccatggcgaggaactggggccagaactggcagagcggcgcgctgctcgacg 656
Query: 759 ggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgt 804
||||||| ||||| ||| || |||||| ||||| |||| |||||
Sbjct: 657 ggcaggcgctgtcgttcacggtgaccaccggcgaccgccgatccgt 702
>dbj|AK100179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029P10, full
insert sequence
Length = 1311
Score = 172 bits (87), Expect = 3e-040
Identities = 230/278 (82%)
Strand = Plus / Plus
Query: 386 tcgtgtctgccgggctccgtcgtggtgacggccaccaacttctgcccgcccaacaacgcg 445
||||| |||||||||||| || |||||||||||||||||||||||||||||| |||
Sbjct: 322 tcgtgcctgccgggctccatcaccgtgacggccaccaacttctgcccgcccaactacggc 381
Query: 446 ctcccntccgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcag 505
||||| ||||||||||||||||||||||||||| ||| | |||||||||||| | ||
Sbjct: 382 ctccccagcgacgacggcggctggtgcaacccgccccgccctcacttcgacatggccgag 441
Query: 506 cccgtgttccagcgcatcgcgctctacagggccggcattgttcccgtctcctaccgcagg 565
|| | |||| | |||||| | ||| | |||||||| || |||||||||| |||||||
Sbjct: 442 ccggcattcctccacatcgcccagtaccgcgccggcatcgtccccgtctccttccgcagg 501
Query: 566 gttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctacttcaac 625
|| ||||| |||||||| || | | |||||| | ||||| |||||||||||||||
Sbjct: 502 gtgccgtgcgtgaagaagggtggggtcaggttcaccgtgaacgggcactcctacttcaac 561
Query: 626 ctggtactggtgaccaacgtggaaggcgccggcgacgt 663
||||| |||||||||||||||| ||||||||||||||
Sbjct: 562 ctggtgctggtgaccaacgtggccggcgccggcgacgt 599
Score = 161 bits (81), Expect = 1e-036
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 145 cacgccacgttctacggcggcggcgatgcttccggcaccatgggcggggcttgcggttac 204
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct: 205 ggcaacctgtacagccaagggtatggcacgaacaccgcggcgctgagcacggcgctgttc 264
Query: 320 aacaacggc 328
||| |||||
Sbjct: 265 aacgacggc 273
Score = 107 bits (54), Expect = 2e-020
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctgg 755
||||||||||| || ||||||| ||||||||||||||||||||||||||| || |||| |
Sbjct: 629 ccgggtggcagcccatgtcgcggaactggggccagaactggcagagcaacgcgttcctcg 688
Query: 756 acgggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaaca 815
|||| ||| ||| ||||||| |||||| |||||||||||||| |||| | |||||
Sbjct: 689 acggccagagcctctccttccaggtcaccgccagcgacggccgcaccgtcaccagcaaca 748
Query: 816 acgccgccccccgcggctggtctttcggccagac 849
||| ||||| || ||||||| |||||||||||
Sbjct: 749 acgtcgcccaccccggctggcagttcggccagac 782
>dbj|AK105988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G10, full
insert sequence
Length = 2440
Score = 172 bits (87), Expect = 3e-040
Identities = 230/278 (82%)
Strand = Plus / Plus
Query: 386 tcgtgtctgccgggctccgtcgtggtgacggccaccaacttctgcccgcccaacaacgcg 445
||||| |||||||||||| || |||||||||||||||||||||||||||||| |||
Sbjct: 321 tcgtgcctgccgggctccatcaccgtgacggccaccaacttctgcccgcccaactacggc 380
Query: 446 ctcccntccgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcag 505
||||| ||||||||||||||||||||||||||| ||| | |||||||||||| | ||
Sbjct: 381 ctccccagcgacgacggcggctggtgcaacccgccccgccctcacttcgacatggccgag 440
Query: 506 cccgtgttccagcgcatcgcgctctacagggccggcattgttcccgtctcctaccgcagg 565
|| | |||| | |||||| | ||| | |||||||| || |||||||||| |||||||
Sbjct: 441 ccggcattcctccacatcgcccagtaccgcgccggcatcgtccccgtctccttccgcagg 500
Query: 566 gttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctacttcaac 625
|| ||||| |||||||| || | | |||||| | ||||| |||||||||||||||
Sbjct: 501 gtgccgtgcgtgaagaagggtggggtcaggttcaccgtgaacgggcactcctacttcaac 560
Query: 626 ctggtactggtgaccaacgtggaaggcgccggcgacgt 663
||||| |||||||||||||||| ||||||||||||||
Sbjct: 561 ctggtgctggtgaccaacgtggccggcgccggcgacgt 598
Score = 161 bits (81), Expect = 1e-036
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 144 cacgccacgttctacggcggcggcgatgcttccggcaccatgggcggggcttgcggttac 203
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct: 204 ggcaacctgtacagccaagggtatggcacgaacaccgcggcgctgagcacggcgctgttc 263
Query: 320 aacaacggc 328
||| |||||
Sbjct: 264 aacgacggc 272
Score = 107 bits (54), Expect = 2e-020
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctgg 755
||||||||||| || ||||||| ||||||||||||||||||||||||||| || |||| |
Sbjct: 628 ccgggtggcagcccatgtcgcggaactggggccagaactggcagagcaacgcgttcctcg 687
Query: 756 acgggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaaca 815
|||| ||| ||| ||||||| |||||| |||||||||||||| |||| | |||||
Sbjct: 688 acggccagagcctctccttccaggtcaccgccagcgacggccgcaccgtcaccagcaaca 747
Query: 816 acgccgccccccgcggctggtctttcggccagac 849
||| ||||| || ||||||| |||||||||||
Sbjct: 748 acgtcgcccaccccggctggcagttcggccagac 781
>dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-C08, full
insert sequence
Length = 1044
Score = 172 bits (87), Expect = 3e-040
Identities = 144/163 (88%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| || |||||||| ||||| || ||||| ||||||
Sbjct: 110 cacgccacgttctacggcggcggcgacgcctccggcacgatgggtggcgcgtgcgggtac 169
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 170 gggaacctgtacagccaggggtacggcacgagcacggcggcgctgagcacggcgctgttc 229
Query: 320 aacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcg 362
|||| ||||| ||||||||| |||||| |||| | |||||||
Sbjct: 230 aacaggggcctgagctgcggctcctgctacgagctccggtgcg 272
Score = 107 bits (54), Expect = 2e-020
Identities = 206/257 (80%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||| |||||||||||||| || ||| |||||||||| ||||| |||||||||
Sbjct: 319 ggtgacggcgaccaacttctgccccccgaactacgcgctcccgagcgacggcggcggctg 378
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgct 528
||||||||| ||||| ||||||||| | | |||| | ||||| ||||||||||
Sbjct: 379 gtgcaacccaccgcggcggcacttcgacctcgccgagccggcgttcctccgcatcgcgcg 438
Query: 529 ctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcgg 588
|| ||||| || || || ||||||| |||| | || |||||| || |||||||||
Sbjct: 439 gcacgccgccgggatcgtcccggtctccttccgccgcgtggcgtgcgccaggaagggcgg 498
Query: 589 catacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtgga 648
| | | |||||| ||||||||||| |||||||||||||||| || || |||||||| |
Sbjct: 499 cgtcaggttcaccgtcaacggccacgcctacttcaacctggtgctcgtcaccaacgtcgg 558
Query: 649 aggcgccggcgacgtgc 665
||||||||||||||||
Sbjct: 559 cggcgccggcgacgtgc 575
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 711 tgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcaggccctgt 770
|||||||||||||||| |||||||||||||||||| || ||| ||||| |||| || |
Sbjct: 636 tgtcgcgcaactgggggcagaactggcagagcaacgcgtacctcgacggcaaggcgctct 695
Query: 771 ccttccgcgtcaccaccagcgacggccgctcc 802
|||||||||||||| || ||||||||||||||
Sbjct: 696 ccttccgcgtcaccgccggcgacggccgctcc 727
>ref|XM_475418.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 741
Score = 172 bits (87), Expect = 3e-040
Identities = 230/278 (82%)
Strand = Plus / Plus
Query: 386 tcgtgtctgccgggctccgtcgtggtgacggccaccaacttctgcccgcccaacaacgcg 445
||||| |||||||||||| || |||||||||||||||||||||||||||||| |||
Sbjct: 259 tcgtgcctgccgggctccatcaccgtgacggccaccaacttctgcccgcccaactacggc 318
Query: 446 ctcccntccgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcag 505
||||| ||||||||||||||||||||||||||| ||| | |||||||||||| | ||
Sbjct: 319 ctccccagcgacgacggcggctggtgcaacccgccccgccctcacttcgacatggccgag 378
Query: 506 cccgtgttccagcgcatcgcgctctacagggccggcattgttcccgtctcctaccgcagg 565
|| | |||| | |||||| | ||| | |||||||| || |||||||||| |||||||
Sbjct: 379 ccggcattcctccacatcgcccagtaccgcgccggcatcgtccccgtctccttccgcagg 438
Query: 566 gttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctacttcaac 625
|| ||||| |||||||| || | | |||||| | ||||| |||||||||||||||
Sbjct: 439 gtgccgtgcgtgaagaagggtggggtcaggttcaccgtgaacgggcactcctacttcaac 498
Query: 626 ctggtactggtgaccaacgtggaaggcgccggcgacgt 663
||||| |||||||||||||||| ||||||||||||||
Sbjct: 499 ctggtgctggtgaccaacgtggccggcgccggcgacgt 536
Score = 161 bits (81), Expect = 1e-036
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 82 cacgccacgttctacggcggcggcgatgcttccggcaccatgggcggggcttgcggttac 141
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct: 142 ggcaacctgtacagccaagggtatggcacgaacaccgcggcgctgagcacggcgctgttc 201
Query: 320 aacaacggc 328
||| |||||
Sbjct: 202 aacgacggc 210
Score = 107 bits (54), Expect = 2e-020
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctgg 755
||||||||||| || ||||||| ||||||||||||||||||||||||||| || |||| |
Sbjct: 566 ccgggtggcagcccatgtcgcggaactggggccagaactggcagagcaacgcgttcctcg 625
Query: 756 acgggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaaca 815
|||| ||| ||| ||||||| |||||| |||||||||||||| |||| | |||||
Sbjct: 626 acggccagagcctctccttccaggtcaccgccagcgacggccgcaccgtcaccagcaaca 685
Query: 816 acgccgccccccgcggctggtctttcggccagac 849
||| ||||| || ||||||| |||||||||||
Sbjct: 686 acgtcgcccaccccggctggcagttcggccagac 719
>gb|D39423.1|D39423 RICS0736A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 368
Score = 168 bits (85), Expect = 5e-039
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 180 cacgccacgttctacggcggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 239
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 240 gggaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 299
Query: 320 aacaacggc 328
||| |||||
Sbjct: 300 aacgacggc 308
>gb|D41260.1|D41260 RICS3629A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 431
Score = 168 bits (85), Expect = 5e-039
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 179 cacgccacgttctacggcggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 238
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 239 gggaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 298
Query: 320 aacaacggc 328
||| |||||
Sbjct: 299 aacgacggc 307
>gb|D41419.1|D41419 RICS3911A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 383
Score = 168 bits (85), Expect = 5e-039
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 179 cacgccacgttctacggcggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 238
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 239 gggaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 298
Query: 320 aacaacggc 328
||| |||||
Sbjct: 299 aacgacggc 307
>dbj|AK070463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M24, full
insert sequence
Length = 1341
Score = 168 bits (85), Expect = 5e-039
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 194 cacgccacgttctacggcggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 253
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 254 gggaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 313
Query: 320 aacaacggc 328
||| |||||
Sbjct: 314 aacgacggc 322
Score = 105 bits (53), Expect = 6e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 401 gccaccaacctgtgcccgccgaactacgcgctccccaacgacgacggcggctggtgcaac 460
Query: 476 ccgccgcgcgcccacttcgacatg 499
||||||||| ||||||||||||||
Sbjct: 461 ccgccgcgcccccacttcgacatg 484
Score = 93.7 bits (47), Expect = 2e-016
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggcatacgt 595
|||||||| || |||||||||||| | ||||| ||||| ||||||||||| || |
Sbjct: 521 gccggcatcgtgcccgtctcctacagaagggtgccgtgcgtgaagaagggcgggatcagg 580
Query: 596 ttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtggaaggcgcc 655
|||||||||||||| |||||||||||||||||| | || ||||||||||||| ||| |
Sbjct: 581 ttcaccatcaacgggcactcctacttcaacctgattcttgtgaccaacgtggccggccca 640
Query: 656 ggcgacgtgca 666
|||||||||||
Sbjct: 641 ggcgacgtgca 651
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaac 745
||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 678 ccgggtggcagcccatgtcccgcaactggggccagaactggcagagcaac 727
>gb|U30477.1|OSU30477 Oryza sativa (japonica cultivar-group) expansin Os-EXPA2 (Os-EXPA2)
mRNA, complete cds
Length = 1323
Score = 168 bits (85), Expect = 5e-039
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 179 cacgccacgttctacggcggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 238
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 239 gggaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 298
Query: 320 aacaacggc 328
||| |||||
Sbjct: 299 aacgacggc 307
Score = 105 bits (53), Expect = 6e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 386 gccaccaacctgtgcccgccgaactacgcgctccccaacgacgacggcggctggtgcaac 445
Query: 476 ccgccgcgcgcccacttcgacatg 499
||||||||| ||||||||||||||
Sbjct: 446 ccgccgcgcccccacttcgacatg 469
Score = 95.6 bits (48), Expect = 6e-017
Identities = 96/112 (85%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggcatacgt 595
|||||||| || |||||||||||| | ||||| ||||| ||||||||||| || |
Sbjct: 506 gccggcatcgtgcccgtctcctacagaagggtgccgtgcgtgaagaagggcgggatcagg 565
Query: 596 ttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtgg 647
|||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 566 ttcaccatcaacgggcactcctacttcaacctggttcttgtgaccaacgtgg 617
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaac 745
||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 663 ccgggtggcagcccatgtcccgcaactggggccagaactggcagagcaac 712
>ref|NM_190380.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 756
Score = 168 bits (85), Expect = 5e-039
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 97 cacgccacgttctacggcggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 156
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 157 gggaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 216
Query: 320 aacaacggc 328
||| |||||
Sbjct: 217 aacgacggc 225
Score = 105 bits (53), Expect = 6e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 304 gccaccaacctgtgcccgccgaactacgcgctccccaacgacgacggcggctggtgcaac 363
Query: 476 ccgccgcgcgcccacttcgacatg 499
||||||||| ||||||||||||||
Sbjct: 364 ccgccgcgcccccacttcgacatg 387
Score = 101 bits (51), Expect = 9e-019
Identities = 111/131 (84%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggcatacgt 595
|||||||| || |||||||||||| | ||||| ||||| ||||||||||| || |
Sbjct: 424 gccggcatcgtgcccgtctcctacagaagggtgccgtgcgtgaagaagggcgggatcagg 483
Query: 596 ttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtggaaggcgcc 655
|||||||||||||| |||||||||||||||||||| || ||||||||||||| ||| |
Sbjct: 484 ttcaccatcaacgggcactcctacttcaacctggttcttgtgaccaacgtggccggccca 543
Query: 656 ggcgacgtgca 666
|||||||||||
Sbjct: 544 ggcgacgtgca 554
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaac 745
||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 581 ccgggtggcagcccatgtcccgcaactggggccagaactggcagagcaac 630
>gb|AU078708.1|AU078708 AU078708 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60526_1A, mRNA sequence
Length = 334
Score = 165 bits (83), Expect = 7e-038
Identities = 144/163 (88%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| || |||||||| ||||| || ||||| ||||||
Sbjct: 94 cacgccacgttctacggcggcggcgacgc-tccggcacgatgggtggcgcgtgcgggtac 152
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 153 gggaacctgtacagccaggggtacggcacgagcacggcggcgctgagcacggcgctgttc 212
Query: 320 aacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcg 362
|||| ||||| ||||||||| |||||| |||| | |||||||
Sbjct: 213 aacaggggcctgagctgcggctcctgctacgagctccggtgcg 255
>gb|BE039217.1|BE039217 OA01E03 OA Oryza sativa (japonica cultivar-group) cDNA 5' similar
to expansin, mRNA sequence
Length = 607
Score = 161 bits (81), Expect = 1e-036
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 151 cacgccacgttctacggcggcggcgatgcttccggcaccatgggcggggcttgcggttac 210
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct: 211 ggcaacctgtacagccaagggtatggcacgaacaccgcggcgctgagcacggcgctgttc 270
Query: 320 aacaacggc 328
||| |||||
Sbjct: 271 aacgacggc 279
Score = 67.9 bits (34), Expect = 1e-008
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 386 tcgtgtctgccgggctccgtcgtggtgacggccaccaacttctgcccgcccaacaacgcg 445
||||| |||||||||||| || |||||||||||||||||||| ||||||||| ||| |
Sbjct: 327 tcgtgcctgccgggctccatcaccgtgacggccaccaacttctggccgcccaactacggg 386
Query: 446 ctcccntccgacgacggcggctggtgcaacccg 478
|| || ||||||||| | ||||||||||||
Sbjct: 387 cttcccagcgacgacgggcggtggtgcaacccg 419
>gb|AU078709.1|AU078709 AU078709 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60552_1A, mRNA sequence
Length = 333
Score = 159 bits (80), Expect = 5e-036
Identities = 143/163 (87%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| || |||||||| ||||| || ||||| ||||||
Sbjct: 96 cacgccacgttctacggcggcggcgacgc-tccggcacgatgggtggcgcgtgcgggtac 154
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 155 gggaacctgtacagccaggggtacggcacgagcacggcggcgctgagcacggcgctgttc 214
Query: 320 aacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcg 362
|| | ||||| ||||||||| |||||| |||| | |||||||
Sbjct: 215 aanaggggcctgagctgcggctcctgctacgagctccggtgcg 257
>gb|D47507.1|D47507 RICS13050A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 320
Score = 157 bits (79), Expect = 2e-035
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||| ||| || |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 185 cacgtcacgttntacggcggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 244
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 245 ggnaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 304
Query: 320 aacaacggc 328
||| |||||
Sbjct: 305 aacgacggc 313
>gb|D40432.1|D40432 RICS2408A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 324
Score = 155 bits (78), Expect = 7e-035
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 117 cacggcacgttctacggcggcggcgatgcgtccggnacgatgggcggggcgtgtgggtat 176
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 177 ggaaacctgtacagcaccgggtacggcaccaacacggcggcgctgagcacggtgctgttc 236
Query: 320 aacaacggc 328
||| |||||
Sbjct: 237 aacgacggc 245
>gb|D41913.1|D41913 RICS4917A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 344
Score = 155 bits (78), Expect = 7e-035
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 163 cacgccacgttctacgncggcggcgatgcgtccggcacgatgggcggggcgtgtgggtat 222
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| ||||||| |||||||||||||||||||||||||| ||| |||
Sbjct: 223 gggaacctgtacagcaccgggtacgtcaccaacacggcggcgctgagcacggtgctgttc 282
Query: 320 aacaacggc 328
||| |||||
Sbjct: 283 aacgacggc 291
>gb|C91713.1|C91713 C91713 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31402_3A, mRNA sequence
Length = 417
Score = 149 bits (75), Expect = 4e-033
Identities = 145/168 (86%), Gaps = 1/168 (0%)
Strand = Plus / Plus
Query: 187 gtggtcctcggctcacgccaccttctacggcggcggcgatgcgtccggcaccatgggcgg 246
|||||| ||||| ||||| || ||||||||||| || || ||||| ||||||||||| ||
Sbjct: 238 gtggtcgtcggcgcacgc-acgttctacggcgggggtgacgcgtcgggcaccatgggagg 296
Query: 247 ggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgag 306
|||||| |||||||| ||||||||||||||||||||||| || |||||||||||| ||||
Sbjct: 297 ggcgtgcgggtacgggaacctctacagccaggggtacgggacgaacacggcggcgttgag 356
Query: 307 cacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggt 354
|||||| | |||||||||||||| || ||||||| | ||||||||
Sbjct: 357 nacggcgntgttcaacaacggccttagttgcggcggttntttcgaggt 404
>gb|D24200.1|D24200 RICR1518A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1518_1A, mRNA sequence
Length = 361
Score = 145 bits (73), Expect = 7e-032
Identities = 114/129 (88%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||| ||| |||||||||| || ||||||||||||||| ||||||||||||||||||||
Sbjct: 179 cacgncacgttctacggcgncgncgatgcgtccggcacgatgggcggggcgtgtgggtat 238
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||| ||||||||||||||||||||| |||||||||||| ||| |||
Sbjct: 239 gggaacctgtacagcaccgggtacggcaccaacacggcgncgctgagcacggtgctgttc 298
Query: 320 aacaacggc 328
||| |||||
Sbjct: 299 aacgacggc 307
>gb|AACV01000668.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000668, whole
genome shotgun sequence
Length = 31747
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 5945 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 5886
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 5885 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 5826
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 5825 cagagctgcggcgcgtgcttcgaggtccggtgcg 5792
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 5583 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 5524
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 5523 acgtcggcggcgccggcgacgtg 5501
Score = 81.8 bits (41), Expect = 9e-013
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 409 ggtgacggccaccaacttctgccc-gcccaacaacgcgctcccntccgacgacggcggct 467
|||||||||||||||| ||||||| ||||||| |||||||| | ||||| |||||| |
Sbjct: 5757 ggtgacggccaccaacctctgccccgcccaactacgcgctcgccggcgacgccggcgggt 5698
Query: 468 ggtgcaacccgccgcgcgcccacttcgacatg 499
|||||||||||||||| | ||||||||||||
Sbjct: 5697 ggtgcaacccgccgcggccgcacttcgacatg 5666
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 5398 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 5339
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 5338 ggctggtccttcggccagac 5319
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 9523035 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 9523094
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 9523095 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 9523154
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 9523155 cagagctgcggcgcgtgcttcgaggtccggtgcg 9523188
Score = 105 bits (53), Expect = 6e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 35219951 gccaccaacctgtgcccgccgaactacgcgctccccaacgacgacggcggctggtgcaac 35220010
Query: 476 ccgccgcgcgcccacttcgacatg 499
||||||||| ||||||||||||||
Sbjct: 35220011 ccgccgcgcccccacttcgacatg 35220034
Score = 101 bits (51), Expect = 9e-019
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||
Sbjct: 35219786 ggcggggcgtgtgggtatgggaacctgtacagcaccgggtacggcaccaacacggcggcg 35219845
Query: 302 ctgagcacggcgctcttcaacaacggc 328
|||||||||| ||| |||||| |||||
Sbjct: 35219846 ctgagcacggtgctgttcaacgacggc 35219872
Score = 95.6 bits (48), Expect = 6e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
|||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||
Sbjct: 9523223 ggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtg 9523282
Query: 469 gtgcaacccgccgcgcgcccacttcgacatg 499
||||||||||||||| | ||||||||||||
Sbjct: 9523283 gtgcaacccgccgcggccgcacttcgacatg 9523313
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 9523396 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 9523455
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 9523456 acgtcggcggcgccggcgacgtg 9523478
Score = 89.7 bits (45), Expect = 4e-015
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
||||||||||| || | |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 35220474 aagaagggcgggatcaggttcaccatcaacgggcactcctacttcaacctggttcttgtg 35220533
Query: 638 accaacgtggaaggcgccggcgacgtgca 666
|||||||||| ||| | |||||||||||
Sbjct: 35220534 accaacgtggccggcccaggcgacgtgca 35220562
Score = 85.7 bits (43), Expect = 6e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||| |||||||||||||| || ||| |||| || | ||||| |||||| |||
Sbjct: 8193457 gtgacggcgaccaacttctgccctccaaactacgccctgtccggcgacgccggcgggtgg 8193398
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| |||||||||||||||||||||
Sbjct: 8193397 tgcaacccgccgcgccgccacttcgacatgtcgcagcc 8193360
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaac 745
||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 35220589 ccgggtggcagcccatgtcccgcaactggggccagaactggcagagcaac 35220638
Score = 71.9 bits (36), Expect = 8e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 35219637 cacgccacgttctacggcggcggcgatgcgtccggcacgatggg 35219680
Score = 67.9 bits (34), Expect = 1e-008
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 454 cgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 8199127 cgacgccggcgggtggtgcaacccgccgcggcgccacttcgacatgtcgcagcc 8199074
Score = 67.9 bits (34), Expect = 1e-008
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 716 cgcaactggggccagaactggcagagcaacacgctcctggacgggcaggccctgtccttc 775
|||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||| |||
Sbjct: 8193154 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 8193095
Query: 776 cg 777
||
Sbjct: 8193094 cg 8193093
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 9523581 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 9523640
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 9523641 ggctggtccttcggccagac 9523660
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||| |||||||||||| |||| |||||||||||||||||
Sbjct: 8199474 cgccacgttctacggcggcagcgacgcgtccggcaccatggg 8199433
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 249 cgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagca 308
|||| |||||||||||| | |||||| |||||||| || |||||| |||||||||||
Sbjct: 8199329 cgtgcgggtacggcaacatgtacagcgccgggtacgggacgaacacgacggcgctgagct 8199270
Query: 309 cggcgct 315
|||||||
Sbjct: 8199269 cggcgct 8199263
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 293 acggcggcgctgagcacggcgctcttcaac 322
||||||||||||||||||||||| ||||||
Sbjct: 8193571 acggcggcgctgagcacggcgctgttcaac 8193542
Score = 46.1 bits (23), Expect = 0.048
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||| || ||||||||||||||
Sbjct: 8193776 ttctacggcggcagcgacgcctccggcaccatggg 8193742
>ref|XM_493787.1| Oryza sativa (japonica cultivar-group), Ozsa8506 predicted mRNA
Length = 747
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 100 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 159
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 160 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 219
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 220 cagagctgcggcgcgtgcttcgaggtccggtgcg 253
Score = 95.6 bits (48), Expect = 6e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
|||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||
Sbjct: 288 ggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtg 347
Query: 469 gtgcaacccgccgcgcgcccacttcgacatg 499
||||||||||||||| | ||||||||||||
Sbjct: 348 gtgcaacccgccgcggccgcacttcgacatg 378
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 461 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 520
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 521 acgtcggcggcgccggcgacgtg 543
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 646 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 705
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 706 ggctggtccttcggccagac 725
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 9522875 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 9522934
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 9522935 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 9522994
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 9522995 cagagctgcggcgcgtgcttcgaggtccggtgcg 9523028
Score = 95.6 bits (48), Expect = 6e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
|||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||
Sbjct: 9523063 ggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtg 9523122
Query: 469 gtgcaacccgccgcgcgcccacttcgacatg 499
||||||||||||||| | ||||||||||||
Sbjct: 9523123 gtgcaacccgccgcggccgcacttcgacatg 9523153
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 9523236 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 9523295
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 9523296 acgtcggcggcgccggcgacgtg 9523318
Score = 85.7 bits (43), Expect = 6e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||| |||||||||||||| || ||| |||| || | ||||| |||||| |||
Sbjct: 8193297 gtgacggcgaccaacttctgccctccaaactacgccctgtccggcgacgccggcgggtgg 8193238
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| |||||||||||||||||||||
Sbjct: 8193237 tgcaacccgccgcgccgccacttcgacatgtcgcagcc 8193200
Score = 67.9 bits (34), Expect = 1e-008
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 454 cgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 8198967 cgacgccggcgggtggtgcaacccgccgcggcgccacttcgacatgtcgcagcc 8198914
Score = 67.9 bits (34), Expect = 1e-008
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 716 cgcaactggggccagaactggcagagcaacacgctcctggacgggcaggccctgtccttc 775
|||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||| |||
Sbjct: 8192994 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 8192935
Query: 776 cg 777
||
Sbjct: 8192934 cg 8192933
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 9523421 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 9523480
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 9523481 ggctggtccttcggccagac 9523500
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||| |||||||||||| |||| |||||||||||||||||
Sbjct: 8199314 cgccacgttctacggcggcagcgacgcgtccggcaccatggg 8199273
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 249 cgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagca 308
|||| |||||||||||| | |||||| |||||||| || |||||| |||||||||||
Sbjct: 8199169 cgtgcgggtacggcaacatgtacagcgccgggtacgggacgaacacgacggcgctgagct 8199110
Query: 309 cggcgct 315
|||||||
Sbjct: 8199109 cggcgct 8199103
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 293 acggcggcgctgagcacggcgctcttcaac 322
||||||||||||||||||||||| ||||||
Sbjct: 8193411 acggcggcgctgagcacggcgctgttcaac 8193382
Score = 46.1 bits (23), Expect = 0.048
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||| || ||||||||||||||
Sbjct: 8193616 ttctacggcggcagcgacgcctccggcaccatggg 8193582
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0424A08
Length = 151294
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 58682 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 58741
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 58742 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 58801
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 58802 cagagctgcggcgcgtgcttcgaggtccggtgcg 58835
Score = 95.6 bits (48), Expect = 6e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
|||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||
Sbjct: 58870 ggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtg 58929
Query: 469 gtgcaacccgccgcgcgcccacttcgacatg 499
||||||||||||||| | ||||||||||||
Sbjct: 58930 gtgcaacccgccgcggccgcacttcgacatg 58960
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 59043 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 59102
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 59103 acgtcggcggcgccggcgacgtg 59125
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 59228 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 59287
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 59288 ggctggtccttcggccagac 59307
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 9572748 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 9572807
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 9572808 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 9572867
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 9572868 cagagctgcggcgcgtgcttcgaggtccggtgcg 9572901
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 9573110 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 9573169
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 9573170 acgtcggcggcgccggcgacgtg 9573192
Score = 85.7 bits (43), Expect = 6e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||| |||||||||||||| || ||| |||| || | ||||| |||||| |||
Sbjct: 8243998 gtgacggcgaccaacttctgccctccaaactacgccctgtccggcgacgccggcgggtgg 8243939
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| |||||||||||||||||||||
Sbjct: 8243938 tgcaacccgccgcgccgccacttcgacatgtcgcagcc 8243901
Score = 81.8 bits (41), Expect = 9e-013
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgccc-gcccaacaacgcgctcccntccgacgacggcggct 467
|||||||||||||||| ||||||| ||||||| |||||||| | ||||| |||||| |
Sbjct: 9572936 ggtgacggccaccaacctctgccccgcccaactacgcgctcgccggcgacgccggcgggt 9572995
Query: 468 ggtgcaacccgccgcgcgcccacttcgacatg 499
|||||||||||||||| | ||||||||||||
Sbjct: 9572996 ggtgcaacccgccgcggccgcacttcgacatg 9573027
Score = 67.9 bits (34), Expect = 1e-008
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 454 cgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 8249670 cgacgccggcgggtggtgcaacccgccgcggcgccacttcgacatgtcgcagcc 8249617
Score = 67.9 bits (34), Expect = 1e-008
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 716 cgcaactggggccagaactggcagagcaacacgctcctggacgggcaggccctgtccttc 775
|||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||| |||
Sbjct: 8243695 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 8243636
Query: 776 cg 777
||
Sbjct: 8243635 cg 8243634
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 9573295 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 9573354
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 9573355 ggctggtccttcggccagac 9573374
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||| |||||||||||| |||| |||||||||||||||||
Sbjct: 8250019 cgccacgttctacggcggcagcgacgcgtccggcaccatggg 8249978
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 293 acggcggcgctgagcacggcgctcttcaac 322
||||||||||||||||||||||| ||||||
Sbjct: 8244112 acggcggcgctgagcacggcgctgttcaac 8244083
Score = 46.1 bits (23), Expect = 0.048
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||| || ||||||||||||||
Sbjct: 8244317 ttctacggcggcagcgacgcctccggcaccatggg 8244283
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 9572748 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 9572807
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 9572808 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 9572867
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 9572868 cagagctgcggcgcgtgcttcgaggtccggtgcg 9572901
Score = 105 bits (53), Expect = 6e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 34637101 gccaccaacctgtgcccgccgaactacgcgctccccaacgacgacggcggctggtgcaac 34637160
Query: 476 ccgccgcgcgcccacttcgacatg 499
||||||||| ||||||||||||||
Sbjct: 34637161 ccgccgcgcccccacttcgacatg 34637184
Score = 101 bits (51), Expect = 9e-019
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||
Sbjct: 34636936 ggcggggcgtgtgggtatgggaacctgtacagcaccgggtacggcaccaacacggcggcg 34636995
Query: 302 ctgagcacggcgctcttcaacaacggc 328
|||||||||| ||| |||||| |||||
Sbjct: 34636996 ctgagcacggtgctgttcaacgacggc 34637022
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 9573110 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 9573169
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 9573170 acgtcggcggcgccggcgacgtg 9573192
Score = 89.7 bits (45), Expect = 4e-015
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
||||||||||| || | |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 34637624 aagaagggcgggatcaggttcaccatcaacgggcactcctacttcaacctggttcttgtg 34637683
Query: 638 accaacgtggaaggcgccggcgacgtgca 666
|||||||||| ||| | |||||||||||
Sbjct: 34637684 accaacgtggccggcccaggcgacgtgca 34637712
Score = 85.7 bits (43), Expect = 6e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||| |||||||||||||| || ||| |||| || | ||||| |||||| |||
Sbjct: 8243998 gtgacggcgaccaacttctgccctccaaactacgccctgtccggcgacgccggcgggtgg 8243939
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| |||||||||||||||||||||
Sbjct: 8243938 tgcaacccgccgcgccgccacttcgacatgtcgcagcc 8243901
Score = 81.8 bits (41), Expect = 9e-013
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgccc-gcccaacaacgcgctcccntccgacgacggcggct 467
|||||||||||||||| ||||||| ||||||| |||||||| | ||||| |||||| |
Sbjct: 9572936 ggtgacggccaccaacctctgccccgcccaactacgcgctcgccggcgacgccggcgggt 9572995
Query: 468 ggtgcaacccgccgcgcgcccacttcgacatg 499
|||||||||||||||| | ||||||||||||
Sbjct: 9572996 ggtgcaacccgccgcggccgcacttcgacatg 9573027
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaac 745
||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 34637739 ccgggtggcagcccatgtcccgcaactggggccagaactggcagagcaac 34637788
Score = 71.9 bits (36), Expect = 8e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 34636787 cacgccacgttctacggcggcggcgatgcgtccggcacgatggg 34636830
Score = 67.9 bits (34), Expect = 1e-008
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 454 cgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 8249670 cgacgccggcgggtggtgcaacccgccgcggcgccacttcgacatgtcgcagcc 8249617
Score = 67.9 bits (34), Expect = 1e-008
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 716 cgcaactggggccagaactggcagagcaacacgctcctggacgggcaggccctgtccttc 775
|||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||| |||
Sbjct: 8243695 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 8243636
Query: 776 cg 777
||
Sbjct: 8243635 cg 8243634
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 9573295 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 9573354
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 9573355 ggctggtccttcggccagac 9573374
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||| |||||||||||| |||| |||||||||||||||||
Sbjct: 8250019 cgccacgttctacggcggcagcgacgcgtccggcaccatggg 8249978
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 293 acggcggcgctgagcacggcgctcttcaac 322
||||||||||||||||||||||| ||||||
Sbjct: 8244112 acggcggcgctgagcacggcgctgttcaac 8244083
Score = 46.1 bits (23), Expect = 0.048
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||| || ||||||||||||||
Sbjct: 8244317 ttctacggcggcagcgacgcctccggcaccatggg 8244283
>gb|DQ062981.1| Oryza sativa (japonica cultivar-group) alpha-expansin 11 (EXPA11)
mRNA, partial cds
Length = 798
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 91 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 150
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 151 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 210
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 211 cagagctgcggcgcgtgcttcgaggtccggtgcg 244
Score = 95.6 bits (48), Expect = 6e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
|||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||
Sbjct: 279 ggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtg 338
Query: 469 gtgcaacccgccgcgcgcccacttcgacatg 499
||||||||||||||| | ||||||||||||
Sbjct: 339 gtgcaacccgccgcggccgcacttcgacatg 369
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 452 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 511
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 512 acgtcggcggcgccggcgacgtg 534
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 637 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 696
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 697 ggctggtccttcggccagac 716
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 139 bits (70), Expect = 4e-030
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctc 268
|||||||||||| |||| ||||| || || ||||| || ||||| ||||||||||||||
Sbjct: 9525253 ttctacggcggcagcgacgcgtcggggacgatgggtggcgcgtgcgggtacggcaacctg 9525312
Query: 269 tacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggc 328
|||||| |||||||| || | |||||||||||||||||||||||| |||||||||||
Sbjct: 9525313 tacagcgccgggtacgggacgagcacggcggcgctgagcacggcgctgttcaacaacggg 9525372
Query: 329 ctcagctgcggcgcctgcttcgaggtgcggtgcg 362
| ||||||||||| ||||||||||| |||||||
Sbjct: 9525373 cagagctgcggcgcgtgcttcgaggtccggtgcg 9525406
Score = 105 bits (53), Expect = 6e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 416 gccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaac 475
||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 35139281 gccaccaacctgtgcccgccgaactacgcgctccccaacgacgacggcggctggtgcaac 35139340
Query: 476 ccgccgcgcgcccacttcgacatg 499
||||||||| ||||||||||||||
Sbjct: 35139341 ccgccgcgcccccacttcgacatg 35139364
Score = 101 bits (51), Expect = 9e-019
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||
Sbjct: 35139116 ggcggggcgtgtgggtatgggaacctgtacagcaccgggtacggcaccaacacggcggcg 35139175
Query: 302 ctgagcacggcgctcttcaacaacggc 328
|||||||||| ||| |||||| |||||
Sbjct: 35139176 ctgagcacggtgctgttcaacgacggc 35139202
Score = 95.6 bits (48), Expect = 6e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
|||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||
Sbjct: 9525441 ggtgacggccaccaacctctgcccgcccaactacgcgctcgccggcgacgccggcgggtg 9525500
Query: 469 gtgcaacccgccgcgcgcccacttcgacatg 499
||||||||||||||| | ||||||||||||
Sbjct: 9525501 gtgcaacccgccgcggccgcacttcgacatg 9525531
Score = 93.7 bits (47), Expect = 2e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 582 agggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtgacca 641
|||||||||| || |||||||||| |||||||||||||||||||||||| || || ||||
Sbjct: 9525614 agggcggcatccggttcaccatcaccggccactcctacttcaacctggtgctcgtcacca 9525673
Query: 642 acgtggaaggcgccggcgacgtg 664
|||| | |||||||||||||||
Sbjct: 9525674 acgtcggcggcgccggcgacgtg 9525696
Score = 89.7 bits (45), Expect = 4e-015
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 578 aagaagggcggcatacgtttcaccatcaacggccactcctacttcaacctggtactggtg 637
||||||||||| || | |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 35139804 aagaagggcgggatcaggttcaccatcaacgggcactcctacttcaacctggttcttgtg 35139863
Query: 638 accaacgtggaaggcgccggcgacgtgca 666
|||||||||| ||| | |||||||||||
Sbjct: 35139864 accaacgtggccggcccaggcgacgtgca 35139892
Score = 85.7 bits (43), Expect = 6e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||| |||||||||||||| || ||| |||| || | ||||| |||||| |||
Sbjct: 8195675 gtgacggcgaccaacttctgccctccaaactacgccctgtccggcgacgccggcgggtgg 8195616
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| |||||||||||||||||||||
Sbjct: 8195615 tgcaacccgccgcgccgccacttcgacatgtcgcagcc 8195578
Score = 75.8 bits (38), Expect = 5e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaac 745
||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 35139919 ccgggtggcagcccatgtcccgcaactggggccagaactggcagagcaac 35139968
Score = 71.9 bits (36), Expect = 8e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 35138967 cacgccacgttctacggcggcggcgatgcgtccggcacgatggg 35139010
Score = 67.9 bits (34), Expect = 1e-008
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 454 cgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 8201345 cgacgccggcgggtggtgcaacccgccgcggcgccacttcgacatgtcgcagcc 8201292
Score = 67.9 bits (34), Expect = 1e-008
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 716 cgcaactggggccagaactggcagagcaacacgctcctggacgggcaggccctgtccttc 775
|||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||| |||
Sbjct: 8195372 cgcaactggggcgcgaactggcagagcaacgcgcgcctcgacgggcaggcgctgtcgttc 8195313
Query: 776 cg 777
||
Sbjct: 8195312 cg 8195311
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|||||| | |||||| |||||||||||||| |||| |||| |||||| ||||||| |
Sbjct: 9525799 tccttcagggtcaccgccagcgacggccgcaccgtcacctccgacaacgtcgccccctcc 9525858
Query: 830 ggctggtctttcggccagac 849
|||||||| |||||||||||
Sbjct: 9525859 ggctggtccttcggccagac 9525878
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
|||||| |||||||||||| |||| |||||||||||||||||
Sbjct: 8201692 cgccacgttctacggcggcagcgacgcgtccggcaccatggg 8201651
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 249 cgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagca 308
|||| |||||||||||| | |||||| |||||||| || |||||| |||||||||||
Sbjct: 8201547 cgtgcgggtacggcaacatgtacagcgccgggtacgggacgaacacgacggcgctgagct 8201488
Query: 309 cggcgct 315
|||||||
Sbjct: 8201487 cggcgct 8201481
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 293 acggcggcgctgagcacggcgctcttcaac 322
||||||||||||||||||||||| ||||||
Sbjct: 8195789 acggcggcgctgagcacggcgctgttcaac 8195760
Score = 46.1 bits (23), Expect = 0.048
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 209 ttctacggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||| || ||||||||||||||
Sbjct: 8195994 ttctacggcggcagcgacgcctccggcaccatggg 8195960
>dbj|AK070133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046O16, full
insert sequence
Length = 1071
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 396 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 455
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 456 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 494
Score = 117 bits (59), Expect = 2e-023
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacgg 261
||||||||||||||||||| |||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 189 cgccaccttctacggcggcagcgacgcctccggcaccatgggcggtgcgtgcgggtacgg 248
Query: 262 caacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaa 321
|||||| |||| || |||||||| || ||||||||||||||||||||||| ||| |
Sbjct: 249 caacctgtacacgcaagggtacgggacgcggacggcggcgctgagcacggcgctgttcga 308
Query: 322 caacggc 328
| |||||
Sbjct: 309 cgacggc 315
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
sequence
Length = 143507
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 85466 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 85525
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 85526 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 85564
Score = 61.9 bits (31), Expect = 8e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||| ||||| |||||||||||||| |||| || |||||||| || |||||||||
Sbjct: 85299 ggcggtgcgtgcgggtacggcaacctgtacacgcaagggtacgggacgcggacggcggcg 85358
Query: 302 ctgagcacggcgctcttcaacaacggc 328
|||||||||||||| ||| || |||||
Sbjct: 85359 ctgagcacggcgctgttcgacgacggc 85385
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 85174 cgccaccttctacggcggcagcgacgcctccggcaccatggg 85215
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0541C02
Length = 150660
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 80917 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 80976
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 80977 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 81015
Score = 61.9 bits (31), Expect = 8e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||| ||||| |||||||||||||| |||| || |||||||| || |||||||||
Sbjct: 80750 ggcggtgcgtgcgggtacggcaacctgtacacgcaagggtacgggacgcggacggcggcg 80809
Query: 302 ctgagcacggcgctcttcaacaacggc 328
|||||||||||||| ||| || |||||
Sbjct: 80810 ctgagcacggcgctgttcgacgacggc 80836
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 80625 cgccaccttctacggcggcagcgacgcctccggcaccatggg 80666
>gb|AACV01014938.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014938, whole
genome shotgun sequence
Length = 1590
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1455 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 1396
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 1395 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 1357
Score = 48.1 bits (24), Expect = 0.012
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 293 acggcggcgctgagcacggcgctcttcaacaacggc 328
||||||||||||||||||||||| ||| || |||||
Sbjct: 1571 acggcggcgctgagcacggcgctgttcgacgacggc 1536
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 11459774 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 11459833
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 11459834 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 11459872
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 11459462 cgccaccttctacggcggcagcgacgcctccggcaccatggg 11459503
Score = 52.0 bits (26), Expect = 8e-004
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 407 gtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggc 466
||||||||||||||| |||||||| |||||||| || ||| | |||| ||||||||
Sbjct: 5968661 gtggtgacggccaccgacttctgcgcgcccaacctcggactctccgacgactacggcggc 5968720
Query: 467 tggtgcaac 475
|||||||||
Sbjct: 5968721 tggtgcaac 5968729
Score = 48.1 bits (24), Expect = 0.012
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 293 acggcggcgctgagcacggcgctcttcaacaacggc 328
||||||||||||||||||||||| ||| || |||||
Sbjct: 11459658 acggcggcgctgagcacggcgctgttcgacgacggc 11459693
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 29158511 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 29158570
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 29158571 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 29158609
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 29158199 cgccaccttctacggcggcagcgacgcctccggcaccatggg 29158240
Score = 52.0 bits (26), Expect = 8e-004
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 407 gtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggc 466
||||||||||||||| |||||||| |||||||| || ||| | |||| ||||||||
Sbjct: 23667398 gtggtgacggccaccgacttctgcgcgcccaacctcggactctccgacgactacggcggc 23667457
Query: 467 tggtgcaac 475
|||||||||
Sbjct: 23667458 tggtgcaac 23667466
Score = 48.1 bits (24), Expect = 0.012
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 293 acggcggcgctgagcacggcgctcttcaacaacggc 328
||||||||||||||||||||||| ||| || |||||
Sbjct: 29158395 acggcggcgctgagcacggcgctgttcgacgacggc 29158430
>gb|DQ061068.1| Oryza sativa (japonica cultivar-group) alpha-expansin 29 (EXPA29)
mRNA, partial cds
Length = 708
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 250 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 309
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 310 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 348
Score = 117 bits (59), Expect = 2e-023
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacgg 261
||||||||||||||||||| |||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 43 cgccaccttctacggcggcagcgacgcctccggcaccatgggcggtgcgtgcgggtacgg 102
Query: 262 caacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaa 321
|||||| |||| || |||||||| || ||||||||||||||||||||||| ||| |
Sbjct: 103 caacctgtacacgcaagggtacgggacgcggacggcggcgctgagcacggcgctgttcga 162
Query: 322 caacggc 328
| |||||
Sbjct: 163 cgacggc 169
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 135 bits (68), Expect = 7e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 409 ggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctg 468
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 30004769 ggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctg 30004828
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 30004829 gtgcaacccgccgcggccgcacttcgacatggcgcagcc 30004867
Score = 69.9 bits (35), Expect = 3e-009
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 454 cgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagccc 508
|||||||||||||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct: 511291 cgacgacggcggctggtgcaacccgccgcggcaccacttcgacatggcgccgccc 511237
Score = 61.9 bits (31), Expect = 8e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||| ||||| |||||||||||||| |||| || |||||||| || |||||||||
Sbjct: 30004602 ggcggtgcgtgcgggtacggcaacctgtacacgcaagggtacgggacgcggacggcggcg 30004661
Query: 302 ctgagcacggcgctcttcaacaacggc 328
|||||||||||||| ||| || |||||
Sbjct: 30004662 ctgagcacggcgctgttcgacgacggc 30004688
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 202 cgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 30004477 cgccaccttctacggcggcagcgacgcctccggcaccatggg 30004518
Score = 52.0 bits (26), Expect = 8e-004
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 407 gtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggc 466
||||||||||||||| |||||||| |||||||| || ||| | |||| ||||||||
Sbjct: 24600377 gtggtgacggccaccgacttctgcgcgcccaacctcggactctccgacgactacggcggc 24600436
Query: 467 tggtgcaac 475
|||||||||
Sbjct: 24600437 tggtgcaac 24600445
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,439,161
Number of Sequences: 438736
Number of extensions: 2439161
Number of successful extensions: 18811
Number of sequences better than 0.5: 219
Number of HSP's better than 0.5 without gapping: 244
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15223
Number of HSP's gapped (non-prelim): 3468
length of query: 1294
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1273
effective length of database: 2,791,206,460
effective search space: 3553205823580
effective search space used: 3553205823580
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)