BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.2
(2027 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK072276.1| Oryza sativa (japonica cultivar-group) cDNA... 549 e-153
gb|AY578159.1| Oryza sativa (japonica cultivar-group) cell-... 549 e-153
ref|XM_472409.1| Oryza sativa (japonica cultivar-group), p... 504 e-139
gb|AACV01009704.1| Oryza sativa (japonica cultivar-group) c... 468 e-129
ref|NT_107198.1| Oryza sativa (japonica cultivar-group) 468 e-129
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 468 e-129
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 468 e-129
emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromoso... 468 e-129
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 468 e-129
gb|CB665439.1|CB665439 OSJNEd11N18.f OSJNEd Oryza sativa (j... 236 4e-059
gb|AY578158.1| Oryza sativa (japonica cultivar-group) cell-... 236 4e-059
dbj|AK121403.1| Oryza sativa (japonica cultivar-group) cDNA... 228 9e-057
dbj|AB073749.1| Oryza sativa (japonica cultivar-group) OsCI... 220 2e-054
gb|CB656698.1|CB656698 OSJNEc11F14.f OSJNEc Oryza sativa (j... 188 8e-045
gb|CB656705.1|CB656705 OSJNEc11F17.r OSJNEc Oryza sativa (j... 184 1e-043
gb|CB656668.1|CB656668 OSJNEc11E15.f OSJNEc Oryza sativa (j... 180 2e-042
gb|CB656704.1|CB656704 OSJNEc11F17.f OSJNEc Oryza sativa (j... 180 2e-042
gb|CB656730.1|CB656730 OSJNEc11G13.f OSJNEc Oryza sativa (j... 180 2e-042
gb|CB656758.1|CB656758 OSJNEc11H12.f OSJNEc Oryza sativa (j... 180 2e-042
gb|CB647638.1|CB647638 OSJNEb10K09.f OSJNEb Oryza sativa (j... 172 5e-040
gb|AU058270.1|AU058270 AU058270 Oryza sativa Nipponbare imm... 168 8e-039
gb|CB656699.1|CB656699 OSJNEc11F14.r OSJNEc Oryza sativa (j... 168 8e-039
gb|CB656696.1|CB656696 OSJNEc11F13.f OSJNEc Oryza sativa (j... 167 3e-038
gb|CZ553792.1|CZ553792 M0015449 AS_TRIM_TDNA_B1 Oryza sativ... 165 1e-037
gb|CB656756.1|CB656756 OSJNEc11H11.f OSJNEc Oryza sativa (j... 163 5e-037
gb|CB636196.1|CB636196 OSJNEa01G09.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB639875.1|CB639875 OSJNEa12F04.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB640745.1|CB640745 OSJNEa16D10.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB640790.1|CB640790 OSJNEa16G19.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB659515.1|CB659515 OSJNEc16J09.f OSJNEc Oryza sativa (j... 161 2e-036
gb|CB662770.1|CB662770 OSJNEd07B16.f OSJNEd Oryza sativa (j... 161 2e-036
dbj|AP004156.3| Oryza sativa (japonica cultivar-group) geno... 161 2e-036
dbj|AP005798.3| Oryza sativa (japonica cultivar-group) geno... 161 2e-036
gb|AACV01004580.1| Oryza sativa (japonica cultivar-group) c... 161 2e-036
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 161 2e-036
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 161 2e-036
gb|CB656759.1|CB656759 OSJNEc11H12.r OSJNEc Oryza sativa (j... 159 7e-036
gb|CB656731.1|CB656731 OSJNEc11G13.r OSJNEc Oryza sativa (j... 139 7e-030
gb|CB665440.1|CB665440 OSJNEd11N18.r OSJNEd Oryza sativa (j... 139 7e-030
dbj|AK120779.1| Oryza sativa (japonica cultivar-group) cDNA... 139 7e-030
gb|AACV01009702.1| Oryza sativa (japonica cultivar-group) c... 139 7e-030
ref|XM_472408.1| Oryza sativa (japonica cultivar-group), p... 139 7e-030
gb|AY578160.1| Oryza sativa (japonica cultivar-group) cell-... 139 7e-030
gb|CB670406.1|CB670406 OSJNEe03H08.r OSJNEe Oryza sativa (j... 131 2e-027
gb|CB656757.1|CB656757 OSJNEc11H11.r OSJNEc Oryza sativa (j... 125 1e-025
gb|CB647639.1|CB647639 OSJNEb10K09.r OSJNEb Oryza sativa (j... 123 4e-025
gb|CB656697.1|CB656697 OSJNEc11F13.r OSJNEc Oryza sativa (j... 123 4e-025
dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA... 123 4e-025
gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 ... 109 6e-021
gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC O... 109 6e-021
ref|XM_469625.1| Oryza sativa (japonica cultivar-group), mRNA 109 6e-021
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 109 6e-021
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 109 6e-021
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 109 6e-021
gb|AACV01007875.1| Oryza sativa (japonica cultivar-group) c... 103 4e-019
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 103 4e-019
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 103 4e-019
gb|CB656637.1|CB656637 OSJNEc11D13.f OSJNEc Oryza sativa (j... 94 4e-016
gb|CB638672.1|CB638672 OSJNEa07D22.r OSJNEa Oryza sativa (j... 86 9e-014
gb|AQ509935.1|AQ509935 nbxb0094F09r CUGI Rice BAC Library O... 84 3e-013
gb|CB662771.1|CB662771 OSJNEd07B16.r OSJNEd Oryza sativa (j... 84 3e-013
gb|CZ269598.1|CZ269598 UCDRGT1694_5.1 UCD RGT Rice Insertio... 80 5e-012
gb|CB675354.1|CB675354 OSJNEe11A24.f OSJNEe Oryza sativa (j... 80 5e-012
gb|CV721157.1|CV721157 YBH--03-B14.b1 Rice before heading y... 80 5e-012
dbj|AK065130.1| Oryza sativa (japonica cultivar-group) cDNA... 80 5e-012
dbj|AK099126.1| Oryza sativa (japonica cultivar-group) cDNA... 80 5e-012
dbj|AK099312.1| Oryza sativa (japonica cultivar-group) cDNA... 80 5e-012
gb|AACV01010189.1| Oryza sativa (japonica cultivar-group) c... 80 5e-012
ref|XM_473317.1| Oryza sativa (japonica cultivar-group), p... 80 5e-012
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 80 5e-012
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 80 5e-012
emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromoso... 80 5e-012
gb|CA755260.1|CA755260 BR030016000_PLATE_F02_14_025.ab1 OA ... 72 1e-009
gb|CB636780.1|CB636780 OSJNEa02K12.f OSJNEa Oryza sativa (j... 72 1e-009
gb|CB636782.1|CB636782 OSJNEa02K13.f OSJNEa Oryza sativa (j... 72 1e-009
gb|CB656568.1|CB656568 OSJNEc11B08.f OSJNEc Oryza sativa (j... 72 1e-009
gb|CB663099.1|CB663099 OSJNEd07L07.f OSJNEd Oryza sativa (j... 72 1e-009
gb|CB663202.1|CB663202 OSJNEd07O05.f OSJNEd Oryza sativa (j... 72 1e-009
gb|CB676021.1|CB676021 OSJNEe12A23.f OSJNEe Oryza sativa (j... 72 1e-009
dbj|AK067444.1| Oryza sativa (japonica cultivar-group) cDNA... 72 1e-009
dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA... 72 1e-009
dbj|AB154521.1| Oryza sativa (japonica cultivar-group) OsCI... 72 1e-009
dbj|AP004851.3| Oryza sativa (japonica cultivar-group) geno... 72 1e-009
gb|AACV01003168.1| Oryza sativa (japonica cultivar-group) c... 72 1e-009
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 72 1e-009
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 72 1e-009
gb|AY578161.1| Oryza sativa (japonica cultivar-group) cell-... 72 1e-009
gb|CB672111.1|CB672111 OSJNEe05P17.f OSJNEe Oryza sativa (j... 70 5e-009
gb|AU091974.1|AU091974 AU091974 Rice immature leaf includin... 62 1e-006
gb|CB636197.1|CB636197 OSJNEa01G09.r OSJNEa Oryza sativa (j... 58 2e-005
gb|CF295239.1|CF295239 30DGS--05-B08.b1 Rice leaf plasmid c... 58 2e-005
gb|AY037871.2| Oryza sativa soluble acid invertase bfruct3 ... 58 2e-005
ref|XM_474246.1| Oryza sativa (japonica cultivar-group), p... 56 8e-005
gb|AY578162.1| Oryza sativa (japonica cultivar-group) cell-... 56 8e-005
gb|AACV01006309.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
ref|XM_474245.1| Oryza sativa (japonica cultivar-group), p... 52 0.001
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 52 0.001
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|AY578163.1| Oryza sativa (japonica cultivar-group) cell-... 52 0.001
emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromoso... 52 0.001
gb|AU184122.1|AU184122 AU184122 Rice root Oryza sativa (jap... 48 0.019
dbj|AG210430.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.075
dbj|AG210442.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.075
dbj|AG214704.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.075
dbj|AG024201.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.075
dbj|AG205539.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.075
dbj|AG022345.2| Oryza sativa (japonica cultivar-group) DNA,... 46 0.075
gb|AACV01003094.1| Oryza sativa (japonica cultivar-group) c... 46 0.075
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.075
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 46 0.075
dbj|AP004365.3| Oryza sativa (japonica cultivar-group) geno... 46 0.075
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.075
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.075
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.075
gb|AQ258089.1|AQ258089 nbxb0019N23f CUGI Rice BAC Library O... 44 0.30
gb|CB670475.1|CB670475 OSJNEe03J01.r OSJNEe Oryza sativa (j... 44 0.30
gb|CB681399.1|CB681399 OSJNEf07J09.r OSJNEf Oryza sativa (j... 44 0.30
dbj|AK069080.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.30
gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16... 44 0.30
gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic... 44 0.30
gb|AACV01019263.1| Oryza sativa (japonica cultivar-group) c... 44 0.30
gb|AACV01021841.1| Oryza sativa (japonica cultivar-group) c... 44 0.30
ref|NM_197108.1| Oryza sativa (japonica cultivar-group) hyp... 44 0.30
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 44 0.30
ref|XM_450319.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 44 0.30
dbj|AP005738.3| Oryza sativa (japonica cultivar-group) geno... 44 0.30
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
gb|CH401235.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
gb|AY578164.1| Oryza sativa (japonica cultivar-group) cell-... 44 0.30
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 44 0.30
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.30
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
>dbj|AK072276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010O04, full
insert sequence
Length = 2089
Score = 549 bits (277), Expect = e-153
Identities = 555/644 (86%), Gaps = 9/644 (1%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 185 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 244
Query: 226 aactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttctac 285
||||||||||||||||| |||||||| |||||||||||||||||||||||| | ||||||
Sbjct: 245 aactggatcaatgatccgaacgcgccgatgtactacaaggggtggtaccatctgttctac 304
Query: 286 caatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcga 345
|| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| ||
Sbjct: 305 cagtacaaccccaagggcgccgtgtgggggaacatcgtgtgggcgcactcagtgtcacgt 364
Query: 346 gacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacagg 405
||||||||||||||||||||||| ||||||| || || |||||| || ||||| |
Sbjct: 365 gacctcatcaactgggtggcgctcaagccggccatcgagcccagcatcagggccgacaag 424
Query: 406 tacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcatg 465
|||||||||||||| |||||||||||| || || ||||||| | || ||||||||||||
Sbjct: 425 tacggctgctggtcggggtcggcgacgatgatggccgacgg-gacg--ccggtgatcatg 481
Query: 466 tacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaag 525
||||| ||||| ||| ||| ||| ||||||||||||| |||||||||||| |||| |
Sbjct: 482 tacaccggcgtcaaccgccccgacgtcaactaccaggtgcagaacgtggcgctgccgagg 541
Query: 526 aacgtgtcggacccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtc 585
|||| ||||||||||||||| || ||||||||||||||| |||||||| || |||||
Sbjct: 542 aacgggtcggacccgctgctgcgcgagtgggtgaagcccggccacaacccggtgatcgtg 601
Query: 586 cccgagggcggcatcaacgcgacgcagttccgcgacccgaccacggcctggcgcggcccc 645
|||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 602 cccgagggcggcatcaacgcgacgcagttccgcgacccgaccaccgcgtggcgcggggcc 661
Query: 646 ggccccgagcagtggcggctgctcgtcggcagcgcggcggggtcgtcgccccgcggcgtg 705
| || || ||||||||||||||||||||| |||||| || |||||||||||
Sbjct: 662 g---acggccactggcggctgctcgtcggcagcctcgcggggcagt---cccgcggcgtg 715
Query: 706 gcgtacgtgtaccgcagccgcgacttccggcggtggaggcgggtgcggcggccgctgcac 765
|||||||||||||| ||| | |||||||||||||||| ||| | | || ||||||||||
Sbjct: 716 gcgtacgtgtaccggagcagggacttccggcggtggacgcgcgcggcgcagccgctgcac 775
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttctacccggt 809
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 776 tcggcgcccacggggatgtgggagtgcccggacttctacccggt 819
Score = 504 bits (254), Expect = e-139
Identities = 394/440 (89%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 897 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 956
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 957 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 1016
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 1017 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 1076
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1077 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 1136
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| ||||||||||| ||||| |||| |||||||||||||| || |||||||| |||||||
Sbjct: 1137 ccggaatccaggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgc 1196
Query: 1175 agtggcctatcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaaca 1231
||||||| ||||||||||| ||| |||||||| |||| |||||| ||||||| |||
Sbjct: 1197 agtggccaatcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggaca 1256
Query: 1232 gggtaatcaaggcaggacatcacgtcgaggtgaccgggatacagacggcacaggctgacg 1291
|||| ||||| |||| | |||||||||||||||||| |||| || |||||||||||||
Sbjct: 1257 gggtggtcaagccaggggaacacgtcgaggtgaccgggctacaaactgcacaggctgacg 1316
Query: 1292 tggaggtgagcttcgaggtg 1311
||||||||||||||||||||
Sbjct: 1317 tggaggtgagcttcgaggtg 1336
Score = 266 bits (134), Expect = 4e-068
Identities = 260/302 (86%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgta 1562
||||||||| |||||||||||||||||||| |||||||| || | ||||||||| ||||
Sbjct: 1534 caagcccgtcgtgctcatgtgcaccgaccccaccaagtcatcgcgcaacccgaacatgta 1593
Query: 1563 ccgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgag 1622
|| ||||| |||||||| || || |||||||||||| | ||||| |||||||| |||||
Sbjct: 1594 ccagccgacgtttgcagggttcgttgacacggacatcaccaacgggaagatatctctgag 1653
Query: 1623 aagcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcct 1682
|||||||||||| | ||||| |||||||||||||| || || || ||| | ||||||||
Sbjct: 1654 gagcctgatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcct 1713
Query: 1683 ctccagggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaa 1742
|| ||||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| ||
Sbjct: 1714 gtcgagggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataa 1773
Query: 1743 cgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcat 1802
||||| |||| | |||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1774 cgggaaggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcat 1833
Query: 1803 ga 1804
||
Sbjct: 1834 ga 1835
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 1360 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 1419
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 1420 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 1479
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 1480 gaccgccgtgttcttcagggtgttca 1505
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 99 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 142
>gb|AY578159.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 2 mRNA,
complete cds
Length = 1995
Score = 549 bits (277), Expect = e-153
Identities = 555/644 (86%), Gaps = 9/644 (1%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 178 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 237
Query: 226 aactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttctac 285
||||||||||||||||| |||||||| |||||||||||||||||||||||| | ||||||
Sbjct: 238 aactggatcaatgatccgaacgcgccgatgtactacaaggggtggtaccatctgttctac 297
Query: 286 caatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcga 345
|| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| ||
Sbjct: 298 cagtacaaccccaagggcgccgtgtgggggaacatcgtgtgggcgcactcagtgtcacgt 357
Query: 346 gacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacagg 405
||||||||||||||||||||||| ||||||| || || |||||| || ||||| |
Sbjct: 358 gacctcatcaactgggtggcgctcaagccggccatcgagcccagcatcagggccgacaag 417
Query: 406 tacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcatg 465
|||||||||||||| |||||||||||| || || ||||||| | || ||||||||||||
Sbjct: 418 tacggctgctggtcggggtcggcgacgatgatggccgacgg-gacg--ccggtgatcatg 474
Query: 466 tacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaag 525
||||| ||||| ||| ||| ||| ||||||||||||| |||||||||||| |||| |
Sbjct: 475 tacaccggcgtcaaccgccccgacgtcaactaccaggtgcagaacgtggcgctgccgagg 534
Query: 526 aacgtgtcggacccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtc 585
|||| ||||||||||||||| || ||||||||||||||| |||||||| || |||||
Sbjct: 535 aacgggtcggacccgctgctgcgcgagtgggtgaagcccggccacaacccggtgatcgtg 594
Query: 586 cccgagggcggcatcaacgcgacgcagttccgcgacccgaccacggcctggcgcggcccc 645
|||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 595 cccgagggcggcatcaacgcgacgcagttccgcgacccgaccaccgcgtggcgcggggcc 654
Query: 646 ggccccgagcagtggcggctgctcgtcggcagcgcggcggggtcgtcgccccgcggcgtg 705
| || || ||||||||||||||||||||| |||||| || |||||||||||
Sbjct: 655 g---acggccactggcggctgctcgtcggcagcctcgcggggcagt---cccgcggcgtg 708
Query: 706 gcgtacgtgtaccgcagccgcgacttccggcggtggaggcgggtgcggcggccgctgcac 765
|||||||||||||| ||| | |||||||||||||||| ||| | | || ||||||||||
Sbjct: 709 gcgtacgtgtaccggagcagggacttccggcggtggacgcgcgcggcgcagccgctgcac 768
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttctacccggt 809
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 769 tcggcgcccacggggatgtgggagtgcccggacttctacccggt 812
Score = 504 bits (254), Expect = e-139
Identities = 394/440 (89%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 890 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 949
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 950 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 1009
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 1010 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 1069
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1070 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 1129
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| ||||||||||| ||||| |||| |||||||||||||| || |||||||| |||||||
Sbjct: 1130 ccggaatccaggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgc 1189
Query: 1175 agtggcctatcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaaca 1231
||||||| ||||||||||| ||| |||||||| |||| |||||| ||||||| |||
Sbjct: 1190 agtggccaatcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggaca 1249
Query: 1232 gggtaatcaaggcaggacatcacgtcgaggtgaccgggatacagacggcacaggctgacg 1291
|||| ||||| |||| | |||||||||||||||||| |||| || |||||||||||||
Sbjct: 1250 gggtggtcaagccaggggaacacgtcgaggtgaccgggctacaaactgcacaggctgacg 1309
Query: 1292 tggaggtgagcttcgaggtg 1311
||||||||||||||||||||
Sbjct: 1310 tggaggtgagcttcgaggtg 1329
Score = 266 bits (134), Expect = 4e-068
Identities = 260/302 (86%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgta 1562
||||||||| |||||||||||||||||||| |||||||| || | ||||||||| ||||
Sbjct: 1527 caagcccgtcgtgctcatgtgcaccgaccccaccaagtcatcgcgcaacccgaacatgta 1586
Query: 1563 ccgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgag 1622
|| ||||| |||||||| || || |||||||||||| | ||||| |||||||| |||||
Sbjct: 1587 ccagccgacgtttgcagggttcgttgacacggacatcaccaacgggaagatatctctgag 1646
Query: 1623 aagcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcct 1682
|||||||||||| | ||||| |||||||||||||| || || || ||| | ||||||||
Sbjct: 1647 gagcctgatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcct 1706
Query: 1683 ctccagggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaa 1742
|| ||||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| ||
Sbjct: 1707 gtcgagggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataa 1766
Query: 1743 cgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcat 1802
||||| |||| | |||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1767 cgggaaggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcat 1826
Query: 1803 ga 1804
||
Sbjct: 1827 ga 1828
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 1353 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 1412
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 1413 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 1472
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 1473 gaccgccgtgttcttcagggtgttca 1498
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 92 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 135
>ref|XM_472409.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1788
Score = 504 bits (254), Expect = e-139
Identities = 394/440 (89%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 836 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 895
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 896 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 955
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 956 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 1015
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1016 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 1075
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| ||||||||||| ||||| |||| |||||||||||||| || |||||||| |||||||
Sbjct: 1076 ccggaatccaggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgc 1135
Query: 1175 agtggcctatcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaaca 1231
||||||| ||||||||||| ||| |||||||| |||| |||||| ||||||| |||
Sbjct: 1136 agtggccaatcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggaca 1195
Query: 1232 gggtaatcaaggcaggacatcacgtcgaggtgaccgggatacagacggcacaggctgacg 1291
|||| ||||| |||| | |||||||||||||||||| |||| || |||||||||||||
Sbjct: 1196 gggtggtcaagccaggggaacacgtcgaggtgaccgggctacaaactgcacaggctgacg 1255
Query: 1292 tggaggtgagcttcgaggtg 1311
||||||||||||||||||||
Sbjct: 1256 tggaggtgagcttcgaggtg 1275
Score = 494 bits (249), Expect = e-136
Identities = 547/644 (84%), Gaps = 18/644 (2%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 133 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 192
Query: 226 aactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttctac 285
||||||||||||| |||| |||||||||||||||||||||||| | ||||||
Sbjct: 193 aactggatcaatg---------cgccgatgtactacaaggggtggtaccatctgttctac 243
Query: 286 caatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcga 345
|| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| ||
Sbjct: 244 cagtacaaccccaagggcgccgtgtgggggaacatcgtgtgggcgcactcagtgtcacgt 303
Query: 346 gacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacagg 405
||||||||||||||||||||||| ||||||| || || |||||| || ||||| |
Sbjct: 304 gacctcatcaactgggtggcgctcaagccggccatcgagcccagcatcagggccgacaag 363
Query: 406 tacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcatg 465
|||||||||||||| |||||||||||| || || ||||||| | || ||||||||||||
Sbjct: 364 tacggctgctggtcggggtcggcgacgatgatggccgacgg-gacg--ccggtgatcatg 420
Query: 466 tacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaag 525
||||| ||||| ||| ||| ||| ||||||||||||| |||||||||||| |||| |
Sbjct: 421 tacaccggcgtcaaccgccccgacgtcaactaccaggtgcagaacgtggcgctgccgagg 480
Query: 526 aacgtgtcggacccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtc 585
|||| ||||||||||||||| || ||||||||||||||| |||||||| || |||||
Sbjct: 481 aacgggtcggacccgctgctgcgcgagtgggtgaagcccggccacaacccggtgatcgtg 540
Query: 586 cccgagggcggcatcaacgcgacgcagttccgcgacccgaccacggcctggcgcggcccc 645
|||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 541 cccgagggcggcatcaacgcgacgcagttccgcgacccgaccaccgcgtggcgcggggcc 600
Query: 646 ggccccgagcagtggcggctgctcgtcggcagcgcggcggggtcgtcgccccgcggcgtg 705
| || || ||||||||||||||||||||| |||||| || |||||||||||
Sbjct: 601 g---acggccactggcggctgctcgtcggcagcctcgcggggcagt---cccgcggcgtg 654
Query: 706 gcgtacgtgtaccgcagccgcgacttccggcggtggaggcgggtgcggcggccgctgcac 765
|||||||||||||| ||| | |||||||||||||||| ||| | | || ||||||||||
Sbjct: 655 gcgtacgtgtaccggagcagggacttccggcggtggacgcgcgcggcgcagccgctgcac 714
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttctacccggt 809
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 715 tcggcgcccacggggatgtgggagtgcccggacttctacccggt 758
Score = 266 bits (134), Expect = 4e-068
Identities = 260/302 (86%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgta 1562
||||||||| |||||||||||||||||||| |||||||| || | ||||||||| ||||
Sbjct: 1473 caagcccgtcgtgctcatgtgcaccgaccccaccaagtcatcgcgcaacccgaacatgta 1532
Query: 1563 ccgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgag 1622
|| ||||| |||||||| || || |||||||||||| | ||||| |||||||| |||||
Sbjct: 1533 ccagccgacgtttgcagggttcgttgacacggacatcaccaacgggaagatatctctgag 1592
Query: 1623 aagcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcct 1682
|||||||||||| | ||||| |||||||||||||| || || || ||| | ||||||||
Sbjct: 1593 gagcctgatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcct 1652
Query: 1683 ctccagggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaa 1742
|| ||||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| ||
Sbjct: 1653 gtcgagggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataa 1712
Query: 1743 cgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcat 1802
||||| |||| | |||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1713 cgggaaggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcat 1772
Query: 1803 ga 1804
||
Sbjct: 1773 ga 1774
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 1299 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 1358
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 1359 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 1418
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 1419 gaccgccgtgttcttcagggtgttca 1444
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 47 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 90
>gb|AACV01009704.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009704, whole
genome shotgun sequence
Length = 16702
Score = 468 bits (236), Expect = e-129
Identities = 484/563 (85%), Gaps = 9/563 (1%)
Strand = Plus / Minus
Query: 247 gcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgcc 306
||||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 14993 gcgccgatgtactacaaggggtggtaccatctgttctaccagtacaaccccaagggcgcc 14934
Query: 307 gtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcg 366
|| ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 14933 gtgtgggggaacatcgtgtgggcgcactcagtgtcacgtgacctcatcaactgggtggcg 14874
Query: 367 ctagagccggcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcg 426
|| ||||||| || || |||||| || ||||| ||||||||||||||| ||||||
Sbjct: 14873 ctcaagccggccatcgagcccagcatcagggccgacaagtacggctgctggtcggggtcg 14814
Query: 427 gcgacggtgctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccg 486
|||||| || || ||||||| | || ||||||||||||||||| ||||| ||| |||
Sbjct: 14813 gcgacgatgatggccgacgg-gacg--ccggtgatcatgtacaccggcgtcaaccgcccc 14757
Query: 487 gacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctc 546
||| ||||||||||||| |||||||||||| |||| ||||| |||||||||||||||
Sbjct: 14756 gacgtcaactaccaggtgcagaacgtggcgctgccgaggaacgggtcggacccgctgctg 14697
Query: 547 cgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcg 606
|| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 14696 cgcgagtgggtgaagcccggccacaacccggtgatcgtgcccgagggcggcatcaacgcg 14637
Query: 607 acgcagttccgcgacccgaccacggcctggcgcggccccggccccgagcagtggcggctg 666
||||||||||||||||||||||| || |||||||| ||| || || |||||||||
Sbjct: 14636 acgcagttccgcgacccgaccaccgcgtggcgcggggccg---acggccactggcggctg 14580
Query: 667 ctcgtcggcagcgcggcggggtcgtcgccccgcggcgtggcgtacgtgtaccgcagccgc 726
|||||||||||| |||||| || ||||||||||||||||||||||||| ||| |
Sbjct: 14579 ctcgtcggcagcctcgcggggcagt---cccgcggcgtggcgtacgtgtaccggagcagg 14523
Query: 727 gacttccggcggtggaggcgggtgcggcggccgctgcactcggcgcccacggggatgtgg 786
|||||||||||||||| ||| | | || |||||||||||||||||||||||||||||||
Sbjct: 14522 gacttccggcggtggacgcgcgcggcgcagccgctgcactcggcgcccacggggatgtgg 14463
Query: 787 gagtgccccgacttctacccggt 809
|||||||| ||||||||||||||
Sbjct: 14462 gagtgcccggacttctacccggt 14440
Score = 349 bits (176), Expect = 4e-093
Identities = 233/252 (92%)
Strand = Plus / Minus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 14362 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 14303
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 14302 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 14243
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 14242 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 14183
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 14182 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 14123
Query: 1115 ctggaatccagg 1126
| ||||||||||
Sbjct: 14122 ccggaatccagg 14111
Score = 159 bits (80), Expect = 7e-036
Identities = 152/176 (86%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| |||||||||||||| || || || ||| | |||||||| || ||
Sbjct: 12065 gatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcctgtcgag 12006
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||
Sbjct: 12005 ggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataacgggaa 11946
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatga 1804
|||| | |||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 11945 ggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcatga 11890
Score = 109 bits (55), Expect = 6e-021
Identities = 138/165 (83%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 1124 aggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggccta 1183
|||| ||||| |||| |||||||||||||| || |||||||| |||||||||||||| |
Sbjct: 13724 aggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgcagtggccaa 13665
Query: 1184 tcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaacagggtaatca 1240
|||||||||| ||| |||||||| |||| |||||| ||||||| ||||||| |||
Sbjct: 13664 tcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggacagggtggtca 13605
Query: 1241 aggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|| |||| | |||||||||||||||||| |||| || |||||||
Sbjct: 13604 agccaggggaacacgtcgaggtgaccgggctacaaactgcacagg 13560
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 12759 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 12700
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 12699 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 12640
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 12639 gaccgccgtgttcttcagggtgttca 12614
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 16204 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 16145
Query: 226 aactggatcaatg 238
|||||||||||||
Sbjct: 16144 aactggatcaatg 16132
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 1549 aacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggc 1608
||||||||| |||||| ||||| |||||||| || || |||||||||||| | |||||
Sbjct: 12431 aacccgaacatgtaccagccgacgtttgcagggttcgttgacacggacatcaccaacggg 12372
Query: 1609 aagatatccctgagaagcctg 1629
|||||||| ||||| ||||||
Sbjct: 12371 aagatatctctgaggagcctg 12351
Score = 60.0 bits (30), Expect = 5e-006
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 12812 caggctgacgtggaggtgagcttcgaggtg 12783
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||||| |||||||||||||||||||| |||||||
Sbjct: 12585 caagcccgtcgtgctcatgtgcaccgaccccaccaagt 12548
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 16290 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 16247
>ref|NT_107198.1| Oryza sativa (japonica cultivar-group)
Length = 632744
Score = 468 bits (236), Expect = e-129
Identities = 484/563 (85%), Gaps = 9/563 (1%)
Strand = Plus / Plus
Query: 247 gcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgcc 306
||||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 163191 gcgccgatgtactacaaggggtggtaccatctgttctaccagtacaaccccaagggcgcc 163250
Query: 307 gtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcg 366
|| ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 163251 gtgtgggggaacatcgtgtgggcgcactcagtgtcacgtgacctcatcaactgggtggcg 163310
Query: 367 ctagagccggcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcg 426
|| ||||||| || || |||||| || ||||| ||||||||||||||| ||||||
Sbjct: 163311 ctcaagccggccatcgagcccagcatcagggccgacaagtacggctgctggtcggggtcg 163370
Query: 427 gcgacggtgctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccg 486
|||||| || || ||||||| | || ||||||||||||||||| ||||| ||| |||
Sbjct: 163371 gcgacgatgatggccgacgg-gacg--ccggtgatcatgtacaccggcgtcaaccgcccc 163427
Query: 487 gacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctc 546
||| ||||||||||||| |||||||||||| |||| ||||| |||||||||||||||
Sbjct: 163428 gacgtcaactaccaggtgcagaacgtggcgctgccgaggaacgggtcggacccgctgctg 163487
Query: 547 cgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcg 606
|| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 163488 cgcgagtgggtgaagcccggccacaacccggtgatcgtgcccgagggcggcatcaacgcg 163547
Query: 607 acgcagttccgcgacccgaccacggcctggcgcggccccggccccgagcagtggcggctg 666
||||||||||||||||||||||| || |||||||| ||| || || |||||||||
Sbjct: 163548 acgcagttccgcgacccgaccaccgcgtggcgcggggccg---acggccactggcggctg 163604
Query: 667 ctcgtcggcagcgcggcggggtcgtcgccccgcggcgtggcgtacgtgtaccgcagccgc 726
|||||||||||| |||||| || ||||||||||||||||||||||||| ||| |
Sbjct: 163605 ctcgtcggcagcctcgcggggcagt---cccgcggcgtggcgtacgtgtaccggagcagg 163661
Query: 727 gacttccggcggtggaggcgggtgcggcggccgctgcactcggcgcccacggggatgtgg 786
|||||||||||||||| ||| | | || |||||||||||||||||||||||||||||||
Sbjct: 163662 gacttccggcggtggacgcgcgcggcgcagccgctgcactcggcgcccacggggatgtgg 163721
Query: 787 gagtgccccgacttctacccggt 809
|||||||| ||||||||||||||
Sbjct: 163722 gagtgcccggacttctacccggt 163744
Score = 349 bits (176), Expect = 4e-093
Identities = 233/252 (92%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 163822 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 163881
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 163882 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 163941
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 163942 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 164001
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 164002 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 164061
Query: 1115 ctggaatccagg 1126
| ||||||||||
Sbjct: 164062 ccggaatccagg 164073
Score = 159 bits (80), Expect = 7e-036
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| |||||||||||||| || || || ||| | |||||||| || ||
Sbjct: 166119 gatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcctgtcgag 166178
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||
Sbjct: 166179 ggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataacgggaa 166238
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatga 1804
|||| | |||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 166239 ggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcatga 166294
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 153158 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 153217
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 153218 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 153259
Score = 109 bits (55), Expect = 6e-021
Identities = 138/165 (83%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 1124 aggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggccta 1183
|||| ||||| |||| |||||||||||||| || |||||||| |||||||||||||| |
Sbjct: 164460 aggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgcagtggccaa 164519
Query: 1184 tcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaacagggtaatca 1240
|||||||||| ||| |||||||| |||| |||||| ||||||| ||||||| |||
Sbjct: 164520 tcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggacagggtggtca 164579
Query: 1241 aggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|| |||| | |||||||||||||||||| |||| || |||||||
Sbjct: 164580 agccaggggaacacgtcgaggtgaccgggctacaaactgcacagg 164624
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 153755 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 153814
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 153815 gccgtcttcttcagggtgttcaag 153838
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 165425 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 165484
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 165485 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 165544
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 165545 gaccgccgtgttcttcagggtgttca 165570
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 253 atgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgg 312
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| |||
Sbjct: 152419 atgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtgg 152478
Query: 313 ggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagag 372
|| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| |||
Sbjct: 152479 gggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctggag 152538
Query: 373 ccgg 376
||||
Sbjct: 152539 ccgg 152542
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 161980 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 162039
Query: 226 aactggatcaatg 238
|||||||||||||
Sbjct: 162040 aactggatcaatg 162052
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 152905 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 152950
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1549 aacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggc 1608
||||||||| |||||| ||||| |||||||| || || |||||||||||| | |||||
Sbjct: 165753 aacccgaacatgtaccagccgacgtttgcagggttcgttgacacggacatcaccaacggg 165812
Query: 1609 aagatatccctgagaagcctg 1629
|||||||| ||||| ||||||
Sbjct: 165813 aagatatctctgaggagcctg 165833
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||||| |||||||||||||||||||| |||||||
Sbjct: 165599 caagcccgtcgtgctcatgtgcaccgaccccaccaagt 165636
Score = 60.0 bits (30), Expect = 5e-006
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 165372 caggctgacgtggaggtgagcttcgaggtg 165401
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 152726 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 152784
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 152785 accgcctgg 152793
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||| |||| |||||||||||||| || |||||| ||||||||||
Sbjct: 152135 gctccggaccgggtaccacttccaaccacccaagcactggatcaa 152179
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 161894 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 161937
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 468 bits (236), Expect = e-129
Identities = 484/563 (85%), Gaps = 9/563 (1%)
Strand = Plus / Plus
Query: 247 gcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgcc 306
||||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 10215151 gcgccgatgtactacaaggggtggtaccatctgttctaccagtacaaccccaagggcgcc 10215210
Query: 307 gtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcg 366
|| ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 10215211 gtgtgggggaacatcgtgtgggcgcactcagtgtcacgtgacctcatcaactgggtggcg 10215270
Query: 367 ctagagccggcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcg 426
|| ||||||| || || |||||| || ||||| ||||||||||||||| ||||||
Sbjct: 10215271 ctcaagccggccatcgagcccagcatcagggccgacaagtacggctgctggtcggggtcg 10215330
Query: 427 gcgacggtgctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccg 486
|||||| || || ||||||| | || ||||||||||||||||| ||||| ||| |||
Sbjct: 10215331 gcgacgatgatggccgacgg-gacg--ccggtgatcatgtacaccggcgtcaaccgcccc 10215387
Query: 487 gacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctc 546
||| ||||||||||||| |||||||||||| |||| ||||| |||||||||||||||
Sbjct: 10215388 gacgtcaactaccaggtgcagaacgtggcgctgccgaggaacgggtcggacccgctgctg 10215447
Query: 547 cgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcg 606
|| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 10215448 cgcgagtgggtgaagcccggccacaacccggtgatcgtgcccgagggcggcatcaacgcg 10215507
Query: 607 acgcagttccgcgacccgaccacggcctggcgcggccccggccccgagcagtggcggctg 666
||||||||||||||||||||||| || |||||||| ||| || || |||||||||
Sbjct: 10215508 acgcagttccgcgacccgaccaccgcgtggcgcggggccg---acggccactggcggctg 10215564
Query: 667 ctcgtcggcagcgcggcggggtcgtcgccccgcggcgtggcgtacgtgtaccgcagccgc 726
|||||||||||| |||||| || ||||||||||||||||||||||||| ||| |
Sbjct: 10215565 ctcgtcggcagcctcgcggggcagt---cccgcggcgtggcgtacgtgtaccggagcagg 10215621
Query: 727 gacttccggcggtggaggcgggtgcggcggccgctgcactcggcgcccacggggatgtgg 786
|||||||||||||||| ||| | | || |||||||||||||||||||||||||||||||
Sbjct: 10215622 gacttccggcggtggacgcgcgcggcgcagccgctgcactcggcgcccacggggatgtgg 10215681
Query: 787 gagtgccccgacttctacccggt 809
|||||||| ||||||||||||||
Sbjct: 10215682 gagtgcccggacttctacccggt 10215704
Score = 349 bits (176), Expect = 4e-093
Identities = 233/252 (92%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 10215782 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 10215841
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 10215842 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 10215901
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 10215902 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 10215961
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 10215962 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 10216021
Query: 1115 ctggaatccagg 1126
| ||||||||||
Sbjct: 10216022 ccggaatccagg 10216033
Score = 159 bits (80), Expect = 7e-036
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| |||||||||||||| || || || ||| | |||||||| || ||
Sbjct: 10218079 gatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcctgtcgag 10218138
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||
Sbjct: 10218139 ggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataacgggaa 10218198
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatga 1804
|||| | |||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 10218199 ggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcatga 10218254
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 10203488 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 10203547
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 10203548 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 10203589
Score = 109 bits (55), Expect = 6e-021
Identities = 138/165 (83%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 1124 aggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggccta 1183
|||| ||||| |||| |||||||||||||| || |||||||| |||||||||||||| |
Sbjct: 10216420 aggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgcagtggccaa 10216479
Query: 1184 tcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaacagggtaatca 1240
|||||||||| ||| |||||||| |||| |||||| ||||||| ||||||| |||
Sbjct: 10216480 tcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggacagggtggtca 10216539
Query: 1241 aggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|| |||| | |||||||||||||||||| |||| || |||||||
Sbjct: 10216540 agccaggggaacacgtcgaggtgaccgggctacaaactgcacagg 10216584
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 10204085 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 10204144
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 10204145 gccgtcttcttcagggtgttcaag 10204168
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 10217385 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 10217444
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 10217445 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 10217504
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 10217505 gaccgccgtgttcttcagggtgttca 10217530
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 253 atgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgg 312
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| |||
Sbjct: 10202749 atgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtgg 10202808
Query: 313 ggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagag 372
|| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| |||
Sbjct: 10202809 gggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctggag 10202868
Query: 373 ccgg 376
||||
Sbjct: 10202869 ccgg 10202872
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 10213940 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 10213999
Query: 226 aactggatcaatg 238
|||||||||||||
Sbjct: 10214000 aactggatcaatg 10214012
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 10203235 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 10203280
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1549 aacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggc 1608
||||||||| |||||| ||||| |||||||| || || |||||||||||| | |||||
Sbjct: 10217713 aacccgaacatgtaccagccgacgtttgcagggttcgttgacacggacatcaccaacggg 10217772
Query: 1609 aagatatccctgagaagcctg 1629
|||||||| ||||| ||||||
Sbjct: 10217773 aagatatctctgaggagcctg 10217793
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||||| |||||||||||||||||||| |||||||
Sbjct: 10217559 caagcccgtcgtgctcatgtgcaccgaccccaccaagt 10217596
Score = 60.0 bits (30), Expect = 5e-006
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 10217332 caggctgacgtggaggtgagcttcgaggtg 10217361
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 10203056 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 10203114
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 10203115 accgcctgg 10203123
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||| |||| |||||||||||||| || |||||| ||||||||||
Sbjct: 10202465 gctccggaccgggtaccacttccaaccacccaagcactggatcaa 10202509
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 10213854 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 10213897
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 468 bits (236), Expect = e-129
Identities = 484/563 (85%), Gaps = 9/563 (1%)
Strand = Plus / Plus
Query: 247 gcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgcc 306
||||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 17562513 gcgccgatgtactacaaggggtggtaccatctgttctaccagtacaaccccaagggcgcc 17562572
Query: 307 gtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcg 366
|| ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 17562573 gtgtgggggaacatcgtgtgggcgcactcagtgtcacgtgacctcatcaactgggtggcg 17562632
Query: 367 ctagagccggcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcg 426
|| ||||||| || || |||||| || ||||| ||||||||||||||| ||||||
Sbjct: 17562633 ctcaagccggccatcgagcccagcatcagggccgacaagtacggctgctggtcggggtcg 17562692
Query: 427 gcgacggtgctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccg 486
|||||| || || ||||||| | || ||||||||||||||||| ||||| ||| |||
Sbjct: 17562693 gcgacgatgatggccgacgg-gacg--ccggtgatcatgtacaccggcgtcaaccgcccc 17562749
Query: 487 gacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctc 546
||| ||||||||||||| |||||||||||| |||| ||||| |||||||||||||||
Sbjct: 17562750 gacgtcaactaccaggtgcagaacgtggcgctgccgaggaacgggtcggacccgctgctg 17562809
Query: 547 cgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcg 606
|| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 17562810 cgcgagtgggtgaagcccggccacaacccggtgatcgtgcccgagggcggcatcaacgcg 17562869
Query: 607 acgcagttccgcgacccgaccacggcctggcgcggccccggccccgagcagtggcggctg 666
||||||||||||||||||||||| || |||||||| ||| || || |||||||||
Sbjct: 17562870 acgcagttccgcgacccgaccaccgcgtggcgcggggccg---acggccactggcggctg 17562926
Query: 667 ctcgtcggcagcgcggcggggtcgtcgccccgcggcgtggcgtacgtgtaccgcagccgc 726
|||||||||||| |||||| || ||||||||||||||||||||||||| ||| |
Sbjct: 17562927 ctcgtcggcagcctcgcggggcagt---cccgcggcgtggcgtacgtgtaccggagcagg 17562983
Query: 727 gacttccggcggtggaggcgggtgcggcggccgctgcactcggcgcccacggggatgtgg 786
|||||||||||||||| ||| | | || |||||||||||||||||||||||||||||||
Sbjct: 17562984 gacttccggcggtggacgcgcgcggcgcagccgctgcactcggcgcccacggggatgtgg 17563043
Query: 787 gagtgccccgacttctacccggt 809
|||||||| ||||||||||||||
Sbjct: 17563044 gagtgcccggacttctacccggt 17563066
Score = 349 bits (176), Expect = 4e-093
Identities = 233/252 (92%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 17563144 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 17563203
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 17563204 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 17563263
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 17563264 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 17563323
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 17563324 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 17563383
Query: 1115 ctggaatccagg 1126
| ||||||||||
Sbjct: 17563384 ccggaatccagg 17563395
Score = 159 bits (80), Expect = 7e-036
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| |||||||||||||| || || || ||| | |||||||| || ||
Sbjct: 17565441 gatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcctgtcgag 17565500
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||
Sbjct: 17565501 ggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataacgggaa 17565560
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatga 1804
|||| | |||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 17565561 ggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcatga 17565616
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 17550850 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 17550909
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 17550910 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 17550951
Score = 109 bits (55), Expect = 6e-021
Identities = 138/165 (83%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 1124 aggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggccta 1183
|||| ||||| |||| |||||||||||||| || |||||||| |||||||||||||| |
Sbjct: 17563782 aggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgcagtggccaa 17563841
Query: 1184 tcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaacagggtaatca 1240
|||||||||| ||| |||||||| |||| |||||| ||||||| ||||||| |||
Sbjct: 17563842 tcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggacagggtggtca 17563901
Query: 1241 aggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|| |||| | |||||||||||||||||| |||| || |||||||
Sbjct: 17563902 agccaggggaacacgtcgaggtgaccgggctacaaactgcacagg 17563946
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 17551447 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 17551506
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 17551507 gccgtcttcttcagggtgttcaag 17551530
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 17564747 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 17564806
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 17564807 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 17564866
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 17564867 gaccgccgtgttcttcagggtgttca 17564892
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 253 atgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgg 312
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| |||
Sbjct: 17550111 atgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtgg 17550170
Query: 313 ggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagag 372
|| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| |||
Sbjct: 17550171 gggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctggag 17550230
Query: 373 ccgg 376
||||
Sbjct: 17550231 ccgg 17550234
Score = 79.8 bits (40), Expect = 5e-012
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgaccc 1037
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 23717306 tacgactacggcaagttctacgcgtccaagacgttctacgaccc 23717349
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 17561302 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 17561361
Query: 226 aactggatcaatg 238
|||||||||||||
Sbjct: 17561362 aactggatcaatg 17561374
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 17550597 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 17550642
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1549 aacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggc 1608
||||||||| |||||| ||||| |||||||| || || |||||||||||| | |||||
Sbjct: 17565075 aacccgaacatgtaccagccgacgtttgcagggttcgttgacacggacatcaccaacggg 17565134
Query: 1609 aagatatccctgagaagcctg 1629
|||||||| ||||| ||||||
Sbjct: 17565135 aagatatctctgaggagcctg 17565155
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||||| |||||||||||||||||||| |||||||
Sbjct: 17564921 caagcccgtcgtgctcatgtgcaccgaccccaccaagt 17564958
Score = 60.0 bits (30), Expect = 5e-006
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 17564694 caggctgacgtggaggtgagcttcgaggtg 17564723
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 17550418 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 17550476
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 17550477 accgcctgg 17550485
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||| |||| |||||||||||||| || |||||| ||||||||||
Sbjct: 17549827 gctccggaccgggtaccacttccaaccacccaagcactggatcaa 17549871
Score = 48.1 bits (24), Expect = 0.019
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaat 289
||||||||||||| ||||||||| | ||||||||||
Sbjct: 23716572 tgtactacaagggatggtaccatctgttctaccaat 23716607
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 17561216 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 17561259
>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13,
complete sequence
Length = 113960
Score = 468 bits (236), Expect = e-129
Identities = 484/563 (85%), Gaps = 9/563 (1%)
Strand = Plus / Plus
Query: 247 gcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgcc 306
||||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 45978 gcgccgatgtactacaaggggtggtaccatctgttctaccagtacaaccccaagggcgcc 46037
Query: 307 gtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcg 366
|| ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 46038 gtgtgggggaacatcgtgtgggcgcactcagtgtcacgtgacctcatcaactgggtggcg 46097
Query: 367 ctagagccggcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcg 426
|| ||||||| || || |||||| || ||||| ||||||||||||||| ||||||
Sbjct: 46098 ctcaagccggccatcgagcccagcatcagggccgacaagtacggctgctggtcggggtcg 46157
Query: 427 gcgacggtgctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccg 486
|||||| || || ||||||| | || ||||||||||||||||| ||||| ||| |||
Sbjct: 46158 gcgacgatgatggccgacgg-gacg--ccggtgatcatgtacaccggcgtcaaccgcccc 46214
Query: 487 gacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctc 546
||| ||||||||||||| |||||||||||| |||| ||||| |||||||||||||||
Sbjct: 46215 gacgtcaactaccaggtgcagaacgtggcgctgccgaggaacgggtcggacccgctgctg 46274
Query: 547 cgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcg 606
|| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 46275 cgcgagtgggtgaagcccggccacaacccggtgatcgtgcccgagggcggcatcaacgcg 46334
Query: 607 acgcagttccgcgacccgaccacggcctggcgcggccccggccccgagcagtggcggctg 666
||||||||||||||||||||||| || |||||||| ||| || || |||||||||
Sbjct: 46335 acgcagttccgcgacccgaccaccgcgtggcgcggggccg---acggccactggcggctg 46391
Query: 667 ctcgtcggcagcgcggcggggtcgtcgccccgcggcgtggcgtacgtgtaccgcagccgc 726
|||||||||||| |||||| || ||||||||||||||||||||||||| ||| |
Sbjct: 46392 ctcgtcggcagcctcgcggggcagt---cccgcggcgtggcgtacgtgtaccggagcagg 46448
Query: 727 gacttccggcggtggaggcgggtgcggcggccgctgcactcggcgcccacggggatgtgg 786
|||||||||||||||| ||| | | || |||||||||||||||||||||||||||||||
Sbjct: 46449 gacttccggcggtggacgcgcgcggcgcagccgctgcactcggcgcccacggggatgtgg 46508
Query: 787 gagtgccccgacttctacccggt 809
|||||||| ||||||||||||||
Sbjct: 46509 gagtgcccggacttctacccggt 46531
Score = 349 bits (176), Expect = 4e-093
Identities = 233/252 (92%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 46609 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 46668
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 46669 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 46728
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 46729 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 46788
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 46789 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 46848
Query: 1115 ctggaatccagg 1126
| ||||||||||
Sbjct: 46849 ccggaatccagg 46860
Score = 159 bits (80), Expect = 7e-036
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| |||||||||||||| || || || ||| | |||||||| || ||
Sbjct: 48906 gatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcctgtcgag 48965
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||
Sbjct: 48966 ggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataacgggaa 49025
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatga 1804
|||| | |||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 49026 ggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcatga 49081
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 35945 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 36004
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 36005 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 36046
Score = 109 bits (55), Expect = 6e-021
Identities = 138/165 (83%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 1124 aggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggccta 1183
|||| ||||| |||| |||||||||||||| || |||||||| |||||||||||||| |
Sbjct: 47247 aggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgcagtggccaa 47306
Query: 1184 tcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaacagggtaatca 1240
|||||||||| ||| |||||||| |||| |||||| ||||||| ||||||| |||
Sbjct: 47307 tcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggacagggtggtca 47366
Query: 1241 aggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|| |||| | |||||||||||||||||| |||| || |||||||
Sbjct: 47367 agccaggggaacacgtcgaggtgaccgggctacaaactgcacagg 47411
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 36542 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 36601
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 36602 gccgtcttcttcagggtgttcaag 36625
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 48212 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 48271
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 48272 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 48331
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 48332 gaccgccgtgttcttcagggtgttca 48357
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 253 atgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgg 312
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| |||
Sbjct: 35206 atgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtgg 35265
Query: 313 ggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagag 372
|| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| |||
Sbjct: 35266 gggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctggag 35325
Query: 373 ccgg 376
||||
Sbjct: 35326 ccgg 35329
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 44767 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 44826
Query: 226 aactggatcaatg 238
|||||||||||||
Sbjct: 44827 aactggatcaatg 44839
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 35692 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 35737
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1549 aacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggc 1608
||||||||| |||||| ||||| |||||||| || || |||||||||||| | |||||
Sbjct: 48540 aacccgaacatgtaccagccgacgtttgcagggttcgttgacacggacatcaccaacggg 48599
Query: 1609 aagatatccctgagaagcctg 1629
|||||||| ||||| ||||||
Sbjct: 48600 aagatatctctgaggagcctg 48620
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||||| |||||||||||||||||||| |||||||
Sbjct: 48386 caagcccgtcgtgctcatgtgcaccgaccccaccaagt 48423
Score = 60.0 bits (30), Expect = 5e-006
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 48159 caggctgacgtggaggtgagcttcgaggtg 48188
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 35513 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 35571
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 35572 accgcctgg 35580
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||| |||| |||||||||||||| || |||||| ||||||||||
Sbjct: 34922 gctccggaccgggtaccacttccaaccacccaagcactggatcaa 34966
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 44681 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 44724
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 468 bits (236), Expect = e-129
Identities = 484/563 (85%), Gaps = 9/563 (1%)
Strand = Plus / Plus
Query: 247 gcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgcc 306
||||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 20432558 gcgccgatgtactacaaggggtggtaccatctgttctaccagtacaaccccaagggcgcc 20432617
Query: 307 gtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcg 366
|| ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 20432618 gtgtgggggaacatcgtgtgggcgcactcagtgtcacgtgacctcatcaactgggtggcg 20432677
Query: 367 ctagagccggcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcg 426
|| ||||||| || || |||||| || ||||| ||||||||||||||| ||||||
Sbjct: 20432678 ctcaagccggccatcgagcccagcatcagggccgacaagtacggctgctggtcggggtcg 20432737
Query: 427 gcgacggtgctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccg 486
|||||| || || ||||||| | || ||||||||||||||||| ||||| ||| |||
Sbjct: 20432738 gcgacgatgatggccgacgg-gacg--ccggtgatcatgtacaccggcgtcaaccgcccc 20432794
Query: 487 gacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctc 546
||| ||||||||||||| |||||||||||| |||| ||||| |||||||||||||||
Sbjct: 20432795 gacgtcaactaccaggtgcagaacgtggcgctgccgaggaacgggtcggacccgctgctg 20432854
Query: 547 cgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcg 606
|| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 20432855 cgcgagtgggtgaagcccggccacaacccggtgatcgtgcccgagggcggcatcaacgcg 20432914
Query: 607 acgcagttccgcgacccgaccacggcctggcgcggccccggccccgagcagtggcggctg 666
||||||||||||||||||||||| || |||||||| ||| || || |||||||||
Sbjct: 20432915 acgcagttccgcgacccgaccaccgcgtggcgcggggccg---acggccactggcggctg 20432971
Query: 667 ctcgtcggcagcgcggcggggtcgtcgccccgcggcgtggcgtacgtgtaccgcagccgc 726
|||||||||||| |||||| || ||||||||||||||||||||||||| ||| |
Sbjct: 20432972 ctcgtcggcagcctcgcggggcagt---cccgcggcgtggcgtacgtgtaccggagcagg 20433028
Query: 727 gacttccggcggtggaggcgggtgcggcggccgctgcactcggcgcccacggggatgtgg 786
|||||||||||||||| ||| | | || |||||||||||||||||||||||||||||||
Sbjct: 20433029 gacttccggcggtggacgcgcgcggcgcagccgctgcactcggcgcccacggggatgtgg 20433088
Query: 787 gagtgccccgacttctacccggt 809
|||||||| ||||||||||||||
Sbjct: 20433089 gagtgcccggacttctacccggt 20433111
Score = 349 bits (176), Expect = 4e-093
Identities = 233/252 (92%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 20433189 acgtgctcaagaacagcctcgacctgcgccggtacgactactacaccgtcggaacgtacg 20433248
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||| || |||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 20433249 accggaaggccgagcggtacgtgccggacgaccccgccggcgacgagcaccacatccgct 20433308
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 20433309 acgactacggcaacttctacgcctccaagacgttctacgacccggcgaagcgccgccgca 20433368
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
|||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 20433369 tcctctggggatgggccaacgagtccgacaccgccgccgacgacgtggccaagggctggg 20433428
Query: 1115 ctggaatccagg 1126
| ||||||||||
Sbjct: 20433429 ccggaatccagg 20433440
Score = 159 bits (80), Expect = 7e-036
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| |||||||||||||| || || || ||| | |||||||| || ||
Sbjct: 20435486 gatcgacaggtcggttgttgagagcttcggggctggaggaaaggcgtgcatcctgtcgag 20435545
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| |||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||
Sbjct: 20435546 ggtgtacccgtcgctggccatcggcaagaacgcgcgcctttacgttttcaataacgggaa 20435605
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatga 1804
|||| | |||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 20435606 ggcggagatcaaggtgtcgcagctcaccgcgtgggagatgaagaagccggtcatga 20435661
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 20422525 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 20422584
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 20422585 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 20422626
Score = 109 bits (55), Expect = 6e-021
Identities = 138/165 (83%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 1124 aggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggccta 1183
|||| ||||| |||| |||||||||||||| || |||||||| |||||||||||||| |
Sbjct: 20433827 aggcgattccgaggaaagtgtggctggacccaagtgggaagcaactgttgcagtggccaa 20433886
Query: 1184 tcgaggaggtggaggcgctgagagcaaagt---cggtcactctcaagaacagggtaatca 1240
|||||||||| ||| |||||||| |||| |||||| ||||||| ||||||| |||
Sbjct: 20433887 tcgaggaggtcgagaggctgagagggaagtggccggtcattctcaaggacagggtggtca 20433946
Query: 1241 aggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|| |||| | |||||||||||||||||| |||| || |||||||
Sbjct: 20433947 agccaggggaacacgtcgaggtgaccgggctacaaactgcacagg 20433991
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 20423122 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 20423181
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 20423182 gccgtcttcttcagggtgttcaag 20423205
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1341 gctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgt 1400
||||||||||||| |||| ||||||||| || |||||||| ||| | | |||| ||||
Sbjct: 20434792 gctggacccggcgatggcgtacgacgcgcagcggctgtgcagcgcgcggggcgccgacgc 20434851
Query: 1401 gaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagag 1460
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||||
Sbjct: 20434852 gaggggcggcgtggggccgttcggcctgtgggtgctcgcgtccgcggggctggaggagaa 20434911
Query: 1461 aaccgcggtgttcttcagggtgttca 1486
||||| |||||||||||||||||||
Sbjct: 20434912 gaccgccgtgttcttcagggtgttca 20434937
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 253 atgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgg 312
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| |||
Sbjct: 20421786 atgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtgg 20421845
Query: 313 ggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagag 372
|| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| |||
Sbjct: 20421846 gggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctggag 20421905
Query: 373 ccgg 376
||||
Sbjct: 20421906 ccgg 20421909
Score = 79.8 bits (40), Expect = 5e-012
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgaccc 1037
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 26740414 tacgactacggcaagttctacgcgtccaagacgttctacgaccc 26740457
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 166 gtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaag 225
|||||||||||||||||| || | |||| |||| ||||| ||||||||||| ||||||
Sbjct: 20431347 gtgccgccgtccatcgtcgactctgagctccggactgggtatcacttccagccacccaag 20431406
Query: 226 aactggatcaatg 238
|||||||||||||
Sbjct: 20431407 aactggatcaatg 20431419
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 20422272 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 20422317
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1549 aacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggc 1608
||||||||| |||||| ||||| |||||||| || || |||||||||||| | |||||
Sbjct: 20435120 aacccgaacatgtaccagccgacgtttgcagggttcgttgacacggacatcaccaacggg 20435179
Query: 1609 aagatatccctgagaagcctg 1629
|||||||| ||||| ||||||
Sbjct: 20435180 aagatatctctgaggagcctg 20435200
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1503 caagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||||| |||||||||||||||||||| |||||||
Sbjct: 20434966 caagcccgtcgtgctcatgtgcaccgaccccaccaagt 20435003
Score = 60.0 bits (30), Expect = 5e-006
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 20434739 caggctgacgtggaggtgagcttcgaggtg 20434768
Score = 52.0 bits (26), Expect = 0.001
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 1012 tacgcgtccaagacgttctacgacccggccaagcggcgccgcatcctgtggggctgggct 1071
|||||||||||||||||||||||| ||| |||| || ||| | ||||||| ||||
Sbjct: 33975968 tacgcgtccaagacgttctacgacgcgggcaagaaacggcgcgtgctgtgggcgtgggtg 33975909
Query: 1072 aacgagtccgacaccgccgccgacga 1097
||||||||||||| || ||||||||
Sbjct: 33975908 aacgagtccgacagcgaggccgacga 33975883
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 20422093 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 20422151
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 20422152 accgcctgg 20422160
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||| |||| |||||||||||||| || |||||| ||||||||||
Sbjct: 20421502 gctccggaccgggtaccacttccaaccacccaagcactggatcaa 20421546
Score = 48.1 bits (24), Expect = 0.019
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaat 289
||||||||||||| ||||||||| | ||||||||||
Sbjct: 26739680 tgtactacaagggatggtaccatctgttctaccaat 26739715
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 77 tgctgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 20431261 tgctgctgctccagcagctcgccggagcgtcgcacgtcgtctac 20431304
Score = 46.1 bits (23), Expect = 0.075
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1135 aggacggtgtggctggaccccagcgggaagcagctgttgcagtggcc 1181
|||| ||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 33978846 aggaaggtgtggctggacggcgacgggaagcagctgctgcagtggcc 33978800
>gb|CB665439.1|CB665439 OSJNEd11N18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11N18 5', mRNA sequence
Length = 783
Score = 236 bits (119), Expect = 4e-059
Identities = 306/367 (83%), Gaps = 6/367 (1%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 348 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 407
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 408 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 464
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 465 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 524
Query: 1520 tgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtaccgcccgacatttgcag 1579
|||||||||||||||||||||| || | | |||| | || ||| || || ||||| |
Sbjct: 525 tgtgcaccgaccctaccaagtcttctcttagcccggatctctacaagccaacttttgccg 584
Query: 1580 gatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctgatcgaccgat 1639
| || |||||||| ||||||||| ||| ||||| ||| |||||||| |||| ||||| |
Sbjct: 585 ggttcgtcgacaccgacatctcgtccgggaagatctccttgagaagcttgattgaccgtt 644
Query: 1640 cggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtctacccgt 1699
|||| |||||||||||||| ||||||||||||||||||||||| || || || |||||||
Sbjct: 645 cggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtttacccgt 704
Query: 1700 cgctggc 1706
|| ||||
Sbjct: 705 cgatggc 711
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 134 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 193
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 194 atcgaggagctggagacgctgag 216
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 293 caggctgacgtggaggtgagcttggaggtgtc 324
>gb|AY578158.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 1 mRNA,
complete cds
Length = 2129
Score = 236 bits (119), Expect = 4e-059
Identities = 306/367 (83%), Gaps = 6/367 (1%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1276 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 1335
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 1336 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 1392
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 1393 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 1452
Query: 1520 tgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtaccgcccgacatttgcag 1579
|||||||||||||||||||||| || | | |||| | || ||| || || ||||| |
Sbjct: 1453 tgtgcaccgaccctaccaagtcttctcttagcccggatctctacaagccaacttttgccg 1512
Query: 1580 gatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctgatcgaccgat 1639
| || |||||||| ||||||||| ||| ||||| ||| |||||||| |||| ||||| |
Sbjct: 1513 ggttcgtcgacaccgacatctcgtccgggaagatctccttgagaagcttgattgaccgtt 1572
Query: 1640 cggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtctacccgt 1699
|||| |||||||||||||| ||||||||||||||||||||||| || || || |||||||
Sbjct: 1573 cggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtttacccgt 1632
Query: 1700 cgctggc 1706
|| ||||
Sbjct: 1633 cgatggc 1639
Score = 180 bits (91), Expect = 2e-042
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 814 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 873
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 874 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 933
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 934 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 993
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 994 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 1053
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 1054 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 1113
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 1114 agtggccaatcgaggagctggagacgctgag 1144
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 128 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 187
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 188 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 247
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 248 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 307
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 308 ggacctcatcaactggatagcccttgagccggc 340
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 1221 caggctgacgtggaggtgagcttggaggtgtc 1252
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 717 tcggcgctcactgggatgtgggagtgcccagacttct 753
>dbj|AK121403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A09, full
insert sequence
Length = 2103
Score = 228 bits (115), Expect = 9e-057
Identities = 305/367 (83%), Gaps = 6/367 (1%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1326 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 1385
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 1386 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 1442
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 1443 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 1502
Query: 1520 tgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtaccgcccgacatttgcag 1579
|||||||||||||||||||||| || | | || | | || ||| || || ||||| |
Sbjct: 1503 tgtgcaccgaccctaccaagtcttctcttagccaggatctctacaagccaacttttgccg 1562
Query: 1580 gatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctgatcgaccgat 1639
| || |||||||| ||||||||| ||| ||||| ||| |||||||| |||| ||||| |
Sbjct: 1563 ggttcgtcgacaccgacatctcgtccgggaagatctccttgagaagcttgattgaccgtt 1622
Query: 1640 cggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtctacccgt 1699
|||| |||||||||||||| ||||||||||||||||||||||| || || || |||||||
Sbjct: 1623 cggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtttacccgt 1682
Query: 1700 cgctggc 1706
|| ||||
Sbjct: 1683 cgatggc 1689
Score = 180 bits (91), Expect = 2e-042
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 864 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 923
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 924 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 983
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 984 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 1043
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 1044 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 1103
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 1104 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 1163
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 1164 agtggccaatcgaggagctggagacgctgag 1194
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 177 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 236
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 237 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 296
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 297 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 356
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 357 ggacctcatcaactggatagcccttgagccggc 389
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 1271 caggctgacgtggaggtgagcttggaggtgtc 1302
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 767 tcggcgctcactgggatgtgggagtgcccagacttct 803
>dbj|AB073749.1| Oryza sativa (japonica cultivar-group) OsCIN1 mRNA for cell wall
invertase, complete cds
Length = 2203
Score = 220 bits (111), Expect = 2e-054
Identities = 304/367 (82%), Gaps = 6/367 (1%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | || ||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1321 tggacccggcgttcggcgacaacgcggagaggctgtgcggcgcgaagggcgcggacgtga 1380
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 1381 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 1437
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| | ||||||| || ||||
Sbjct: 1438 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccgagcccgtcgtcctca 1497
Query: 1520 tgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtaccgcccgacatttgcag 1579
|||||||||||||||||||||| || | | |||| | || ||| || || ||||| |
Sbjct: 1498 tgtgcaccgaccctaccaagtcttctcttagcccggatctctacaagccaacttttgccg 1557
Query: 1580 gatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctgatcgaccgat 1639
| || |||||||| ||||||||| ||| ||||| ||| |||||||| |||| ||||| |
Sbjct: 1558 ggttcgtcgacaccgacatctcgtccgggaagatctccttgagaagcttgattgaccgtt 1617
Query: 1640 cggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtctacccgt 1699
|||| |||||||||||||| ||||||||||||||||||||||| || || || |||||||
Sbjct: 1618 cggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtttacccgt 1677
Query: 1700 cgctggc 1706
|| ||||
Sbjct: 1678 cgatggc 1684
Score = 180 bits (91), Expect = 2e-042
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 859 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 918
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 919 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 978
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 979 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 1038
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 1039 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 1098
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 1099 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 1158
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 1159 agtggccaatcgaggagctggagacgctgag 1189
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 173 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 232
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 233 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 292
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 293 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 352
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 353 ggacctcatcaactggatagcccttgagccggc 385
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 1266 caggctgacgtggaggtgagcttggaggtgtc 1297
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 762 tcggcgctcactgggatgtgggagtgcccagacttct 798
>gb|CB656698.1|CB656698 OSJNEc11F14.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F14 5', mRNA sequence
Length = 651
Score = 188 bits (95), Expect = 8e-045
Identities = 272/331 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 155 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 214
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 215 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 274
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 275 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 334
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 335 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 394
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| ||||| ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 395 ccggcatccatgccatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 454
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 455 agtggccaatcgaggagctggagacgctgag 485
Score = 50.1 bits (25), Expect = 0.005
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1285 gctgacgtggaggtgagcttcgaggtgtc 1313
|||||||||||||||||||| ||||||||
Sbjct: 565 gctgacgtggaggtgagcttggaggtgtc 593
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 58 tcggcgctcactgggatgtgggagtgcccagacttct 94
>gb|CB656705.1|CB656705 OSJNEc11F17.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F17 3', mRNA sequence
Length = 810
Score = 184 bits (93), Expect = 1e-043
Identities = 262/317 (82%), Gaps = 6/317 (1%)
Strand = Plus / Minus
Query: 1393 gcggacgtgaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgc 1452
|||||||||||||||||||||| | ||||||||||||||||||||||||||| ||
Sbjct: 810 gcggacgtgaggggcggcgtggtg---ttcgggctgtgggtgctggcctccgccggcctg 754
Query: 1453 aaggagagaaccgcggtgttcttcagggtgttcaagcccgccgc---cggcgacaagccc 1509
|||||| |||||| || |||||| | || |||||||| |||| ||||| |||||||
Sbjct: 753 gaggagaaaaccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagccc 694
Query: 1510 gtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtaccgcccg 1569
|| || |||||||||||||||||||||||||| || | | |||| | || ||| ||
Sbjct: 693 gtcgtcctcatgtgcaccgaccctaccaagtcttctcttagcccggatctctacaagcca 634
Query: 1570 acatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctg 1629
|| ||||| || || |||||||| ||||||||| ||| ||||| ||| |||||||| ||
Sbjct: 633 acttttgccgggttcgtcgacaccgacatctcgtccgggaagatctccttgagaagcttg 574
Query: 1630 atcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagg 1689
|| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 573 attgaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgaga 514
Query: 1690 gtctacccgtcgctggc 1706
|| ||||||||| ||||
Sbjct: 513 gtttacccgtcgatggc 497
>gb|CB656668.1|CB656668 OSJNEc11E15.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11E15 5', mRNA sequence
Length = 839
Score = 180 bits (91), Expect = 2e-042
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 154 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 213
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 214 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 273
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 274 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 333
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 334 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 393
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 394 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 453
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 454 agtggccaatcgaggagctggagacgctgag 484
Score = 155 bits (78), Expect = 1e-034
Identities = 172/202 (85%), Gaps = 6/202 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 616 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 675
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 676 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 732
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| | ||||||| || ||||
Sbjct: 733 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgcccagcccgtcgtcctca 792
Query: 1520 tgtgcaccgaccctaccaagtc 1541
||||||||||||||||||||||
Sbjct: 793 tgtgcaccgaccctaccaagtc 814
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 561 caggctgacgtggaggtgagcttggaggtgtc 592
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 57 tcggcgctcactgggatgtgggagtgcccagacttct 93
>gb|CB656704.1|CB656704 OSJNEc11F17.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F17 5', mRNA sequence
Length = 806
Score = 180 bits (91), Expect = 2e-042
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 153 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 212
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 213 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 272
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 273 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 332
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 333 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 392
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 393 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 452
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 453 agtggccaatcgaggagctggagacgctgag 483
Score = 149 bits (75), Expect = 7e-033
Identities = 166/195 (85%), Gaps = 6/195 (3%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 615 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 674
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 675 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 731
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 732 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 791
Query: 1520 tgtgcaccgacccta 1534
|||||||||||||||
Sbjct: 792 tgtgcaccgacccta 806
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 560 caggctgacgtggaggtgagcttggaggtgtc 591
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 56 tcggcgctcactgggatgtgggagtgcccagacttct 92
>gb|CB656730.1|CB656730 OSJNEc11G13.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11G13 5', mRNA sequence
Length = 775
Score = 180 bits (91), Expect = 2e-042
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 153 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 212
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 213 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 272
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 273 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 332
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 333 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 392
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 393 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 452
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 453 agtggccaatcgaggagctggagacgctgag 483
Score = 117 bits (59), Expect = 2e-023
Identities = 130/153 (84%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | ||||||| |||||||||||||||| |||| ||||||||||||
Sbjct: 615 tggacccggcgttcggcgacgacgcagagaggctgtgcggcgcgaagggcgcggacgtga 674
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 675 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 731
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg 1495
|||| || |||||| | || |||||||| ||||
Sbjct: 732 ccgccgtcttcttccgcgtcttcaagccggccg 764
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 560 caggctgacgtggaggtgagcttggaggtgtc 591
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 56 tcggcgctcactgggatgtgggagtgcccagacttct 92
>gb|CB656758.1|CB656758 OSJNEc11H12.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H12 5', mRNA sequence
Length = 817
Score = 180 bits (91), Expect = 2e-042
Identities = 271/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 153 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 212
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 213 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 272
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 273 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 332
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 333 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 392
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 393 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 452
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 453 agtggccaatcgaggagctggagacgctgag 483
Score = 163 bits (82), Expect = 5e-037
Identities = 173/202 (85%), Gaps = 6/202 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 615 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 674
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 675 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 731
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 732 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 791
Query: 1520 tgtgcaccgaccctaccaagtc 1541
||||||||||||||||||||||
Sbjct: 792 tgtgcaccgaccctaccaagtc 813
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 560 caggctgacgtggaggtgagcttggaggtgtc 591
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 56 tcggcgctcactgggatgtgggagtgcccagacttct 92
>gb|CB647638.1|CB647638 OSJNEb10K09.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10K09 5', mRNA sequence
Length = 731
Score = 172 bits (87), Expect = 5e-040
Identities = 270/331 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 34 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 93
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 94 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 153
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 154 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 213
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| | |||||||
Sbjct: 214 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggctgagggctggg 273
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 274 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 333
Query: 1175 agtggcctatcgaggaggtggaggcgctgag 1205
||||||| ||||||||| ||||| |||||||
Sbjct: 334 agtggccaatcgaggagctggagacgctgag 364
Score = 131 bits (66), Expect = 2e-027
Identities = 169/202 (83%), Gaps = 6/202 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 496 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 555
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||| ||||||||||||||||||||||| || | |||| ||
Sbjct: 556 ggggcggcgtgg---tgttcaggctgtgggtgctggcctccgccggcctggaagagaaaa 612
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || ||| |||| |||| ||||| ||| ||||| || ||||
Sbjct: 613 ccgccgtcttcttccgcgtcttccagccggccgggcacggcgtcaaacccgtcgtcctca 672
Query: 1520 tgtgcaccgaccctaccaagtc 1541
||||||||||||||||||||||
Sbjct: 673 tgtgcaccgaccctaccaagtc 694
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 441 caggctgacgtggaggtgagcttggaggtgtc 472
>gb|AU058270.1|AU058270 AU058270 Oryza sativa Nipponbare immature leaf including apical
meristem (under long day condition) Oryza sativa
(japonica cultivar-group) cDNA clone E50295_1A, mRNA
sequence
Length = 467
Score = 168 bits (85), Expect = 8e-039
Identities = 240/291 (82%), Gaps = 3/291 (1%)
Strand = Plus / Plus
Query: 1419 gttcgggctgtgggtgctggcctccgccaaccgcaaggagagaaccgcggtgttcttcag 1478
|||||||||||||||||||||||||||| || |||||| |||||| || |||||| |
Sbjct: 11 gttcgggctgtgggtgctggcctccgccggcctggaggagaaaaccgccgtcttcttccg 70
Query: 1479 ggtgttcaagcccgccgc---cggcgacaagcccgtggtgctcatgtgcaccgaccctac 1535
|| |||||||| |||| ||||| ||||||||| || ||||||||||||||||||||
Sbjct: 71 cgtcttcaagccggccgggcacggcgccaagcccgtcgtcctcatgtgcaccgaccctac 130
Query: 1536 caagtcgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgtcgacacgga 1595
|||||| || | | |||| | || ||| || || ||||| || || |||||||| ||
Sbjct: 131 caagtcttctcttagcccggatctctacaagccaacttttgccgggttcgtcgacaccga 190
Query: 1596 catctcgaacggcaagatatccctgagaagcctgatcgaccgatcggtcgttgagagctt 1655
||||||| ||| ||||| ||| |||||||| |||| ||||| ||||| |||||||||||
Sbjct: 191 catctcgtccgggaagatctccttgagaagcttgattgaccgttcggtggttgagagctt 250
Query: 1656 cggagccgggggcaagacctgcatcctctccagggtctacccgtcgctggc 1706
||| ||||||||||||||||||||||| || || || ||||||||| ||||
Sbjct: 251 cggcgccgggggcaagacctgcatcctgtcgagagtttacccgtcgatggc 301
>gb|CB656699.1|CB656699 OSJNEc11F14.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F14 3', mRNA sequence
Length = 811
Score = 168 bits (85), Expect = 8e-039
Identities = 240/291 (82%), Gaps = 3/291 (1%)
Strand = Plus / Minus
Query: 1419 gttcgggctgtgggtgctggcctccgccaaccgcaaggagagaaccgcggtgttcttcag 1478
|||||||||||||||||||||||||||| || |||||| |||||| || |||||| |
Sbjct: 796 gttcgggctgtgggtgctggcctccgccggcctggaggagaaaaccgccgtcttcttccg 737
Query: 1479 ggtgttcaagcccgccgc---cggcgacaagcccgtggtgctcatgtgcaccgaccctac 1535
|| |||||||| |||| ||||| ||||||||| || ||||||||||||||||||||
Sbjct: 736 cgtcttcaagccggccgggcacggcgccaagcccgtcgtcctcatgtgcaccgaccctac 677
Query: 1536 caagtcgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgtcgacacgga 1595
|||||| || | | |||| | || ||| || || ||||| || || |||||||| ||
Sbjct: 676 caagtcttctcttagcccggatctctacaagccaacttttgccgggttcgtcgacaccga 617
Query: 1596 catctcgaacggcaagatatccctgagaagcctgatcgaccgatcggtcgttgagagctt 1655
||||||| ||| ||||| ||| |||||||| |||| ||||| ||||| |||||||||||
Sbjct: 616 catctcgtccgggaagatctccttgagaagcttgattgaccgttcggtggttgagagctt 557
Query: 1656 cggagccgggggcaagacctgcatcctctccagggtctacccgtcgctggc 1706
||| ||||||||||||||||||||||| || || || ||||||||| ||||
Sbjct: 556 cggcgccgggggcaagacctgcatcctgtcgagagtttacccgtcgatggc 506
>gb|CB656696.1|CB656696 OSJNEc11F13.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F13 5', mRNA sequence
Length = 853
Score = 167 bits (84), Expect = 3e-038
Identities = 271/332 (81%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccg-tgggcacgtac 933
|||||||||||||||||||||| ||| || || ||||||||||| | |||||| |||
Sbjct: 155 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggatgggcatctac 214
Query: 934 cacccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgc 993
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || |||
Sbjct: 215 aacaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgc 274
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgc 1053
|| |||||||||||||||||||| || ||||| |||| |||||||| |||| ||||||
Sbjct: 275 tatgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgc 334
Query: 1054 atcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgg 1113
|||||| || ||||||||||||||||||| || | || |||| ||| || ||||||
Sbjct: 335 atcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctgg 394
Query: 1114 gctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttg 1173
|| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| ||
Sbjct: 395 gccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctg 454
Query: 1174 cagtggcctatcgaggaggtggaggcgctgag 1205
|||||||| ||||||||| ||||| |||||||
Sbjct: 455 cagtggccaatcgaggagctggagacgctgag 486
Score = 135 bits (68), Expect = 1e-028
Identities = 165/196 (84%), Gaps = 6/196 (3%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | ||||| |||||||||||||||||| |||| ||||||||||||
Sbjct: 618 tggacccggcgttcggcgacgacacggagaggctgtgcggcgcgaagggcgcggacgtga 677
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 678 tgggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 734
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 735 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 794
Query: 1520 tgtgcaccgaccctac 1535
||||||||||||||||
Sbjct: 795 tgtgcaccgaccctac 810
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 563 caggctgacgtggaggtgagcttggaggtgtc 594
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 58 tcggcgctcactgggatgtgggagtgcccagacttct 94
>gb|CZ553792.1|CZ553792 M0015449 AS_TRIM_TDNA_B1 Oryza sativa (japonica cultivar-group)
genomic clone M0015449, DNA sequence
Length = 493
Score = 165 bits (83), Expect = 1e-037
Identities = 119/131 (90%)
Strand = Plus / Minus
Query: 247 gcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgcc 306
||||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 153 gcgccgatgtactacaaggggtggtaccatctgttctaccagtacaaccccaagggcgcc 94
Query: 307 gtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcg 366
|| ||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 93 gtgtgggggaacatcgtgtgggcgcactcagtgtcacgtgacctcatcaactgggtggcg 34
Query: 367 ctagagccggc 377
|| |||||||
Sbjct: 33 ctcaagccggc 23
>gb|CB656756.1|CB656756 OSJNEc11H11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H11 5', mRNA sequence
Length = 687
Score = 163 bits (82), Expect = 5e-037
Identities = 268/330 (81%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||| | ||| || || ||||||||||| ||||||| |||
Sbjct: 152 acgtgctcaagaacagcctccatctcacccgttatgactactacacggtgggcatctaca 211
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 212 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 271
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || |||| |||| |||||||| |||| |||||||
Sbjct: 272 atgactacggcaacttctacgcatcatagaccttcttcgacccggtgaagcaccgccgca 331
Query: 1055 tcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctggg 1114
||||| || ||||||||||||||||||| || | || |||| ||| || |||||||
Sbjct: 332 tcctgcttgggtgggctaacgagtccgacagcgtcacctacgacaaggcgaagggctggg 391
Query: 1115 ctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgc 1174
| || ||||| || || ||||| | ||| ||||||||||| |||||||||||||| |||
Sbjct: 392 ccggcatccatgcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgc 451
Query: 1175 agtggcctatcgaggaggtggaggcgctga 1204
||||||| ||||||||| ||||| ||||||
Sbjct: 452 agtggccaatcgaggagctggagacgctga 481
Score = 67.9 bits (34), Expect = 2e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1361 acgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgaggggcggc 1410
|||||||||||||||||||||||| |||| |||| ||||||| |||||||
Sbjct: 632 acgacgcggagaggctgtgcggcgcgaagggcgcagacgtgatgggcggc 681
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| || |||||
Sbjct: 559 caggctgacgtggaggtgagcttggacgtgtc 590
>gb|CB636196.1|CB636196 OSJNEa01G09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01G09 5', mRNA sequence
Length = 516
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 153 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 212
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 213 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 272
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 273 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 332
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 333 ggacctcatcaactggatagcccttgagccggc 365
>gb|CB639875.1|CB639875 OSJNEa12F04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa12F04 5', mRNA sequence
Length = 484
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 153 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 212
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 213 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 272
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 273 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 332
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 333 ggacctcatcaactggatagcccttgagccggc 365
>gb|CB640745.1|CB640745 OSJNEa16D10.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa16D10 5', mRNA sequence
Length = 542
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 134 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 193
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 194 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 253
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 254 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 313
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 314 ggacctcatcaactggatagcccttgagccggc 346
>gb|CB640790.1|CB640790 OSJNEa16G19.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa16G19 5', mRNA sequence
Length = 626
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 134 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 193
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 194 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 253
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 254 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 313
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 314 ggacctcatcaactggatagcccttgagccggc 346
>gb|CB659515.1|CB659515 OSJNEc16J09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16J09 5', mRNA sequence
Length = 797
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 162 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 221
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| ||||| |||| ||| |||| |||||||| |||||||| | |||||
Sbjct: 222 gaactggatcaacgatccgaacgggccactgtattacaagggatggtaccacctattcta 281
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||||||| || || |||||||| ||||||||||| |||||||| || |
Sbjct: 282 ccagtacaaccccaagggagctgtgtggggcaatatcgtgtgggctcactcggtatcaca 341
Query: 345 agacctcatcaactgggtggcgctagagccggc 377
||||||||||||||| | || || ||||||||
Sbjct: 342 ggacctcatcaactggatagcccttgagccggc 374
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 751 tcggcgctcactgggatgtgggagtgcccagacttct 787
>gb|CB662770.1|CB662770 OSJNEd07B16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07B16 5', mRNA sequence
Length = 850
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 244 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 303
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 304 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 360
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 361 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 420
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 421 tgtgcaccgaccctaccaagt 441
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 189 caggctgacgtggaggtgagcttggaggtgtc 220
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_G07
Length = 149119
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 13893 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 13952
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 13953 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 14009
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 14010 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 14069
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 14070 tgtgcaccgaccctaccaagt 14090
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 12852 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 12911
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 12912 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 12971
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 12972 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 13031
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 13032 tcctgcttgggtgggctaacgagtccgaca 13061
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||| |||||||| |||||||| | |||||||| ||||| |||||||| || || ||||
Sbjct: 12255 tgtattacaagggatggtaccacctattctaccagtacaaccccaagggagctgtgtggg 12314
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
|||| ||||||||||| |||||||| || | ||||||||||||||| | || || ||||
Sbjct: 12315 gcaatatcgtgtgggctcactcggtatcacaggacctcatcaactggatagcccttgagc 12374
Query: 374 cggc 377
||||
Sbjct: 12375 cggc 12378
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 14620 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 14679
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 14680 tacccgtcgatggc 14693
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 10663 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 10722
Query: 225 gaactggatcaa 236
||||||||||||
Sbjct: 10723 gaactggatcaa 10734
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 13280 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 13339
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 13340 atcgaggagctggagacgctgag 13362
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 13838 caggctgacgtggaggtgagcttggaggtgtc 13869
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 12755 tcggcgctcactgggatgtgggagtgcccagacttct 12791
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1136H02
Length = 145086
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 62100 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 62159
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 62160 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 62216
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 62217 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 62276
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 62277 tgtgcaccgaccctaccaagt 62297
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 61059 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 61118
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 61119 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 61178
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 61179 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 61238
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 61239 tcctgcttgggtgggctaacgagtccgaca 61268
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||| |||||||| |||||||| | |||||||| ||||| |||||||| || || ||||
Sbjct: 60462 tgtattacaagggatggtaccacctattctaccagtacaaccccaagggagctgtgtggg 60521
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
|||| ||||||||||| |||||||| || | ||||||||||||||| | || || ||||
Sbjct: 60522 gcaatatcgtgtgggctcactcggtatcacaggacctcatcaactggatagcccttgagc 60581
Query: 374 cggc 377
||||
Sbjct: 60582 cggc 60585
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 62827 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 62886
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 62887 tacccgtcgatggc 62900
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 58870 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 58929
Query: 225 gaactggatcaa 236
||||||||||||
Sbjct: 58930 gaactggatcaa 58941
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 61487 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 61546
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 61547 atcgaggagctggagacgctgag 61569
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 62045 caggctgacgtggaggtgagcttggaggtgtc 62076
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 60962 tcggcgctcactgggatgtgggagtgcccagacttct 60998
>gb|AACV01004580.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004580, whole
genome shotgun sequence
Length = 8396
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 2955 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 3014
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 3015 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 3071
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 3072 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 3131
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 3132 tgtgcaccgaccctaccaagt 3152
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 1914 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 1973
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 1974 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 2033
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 2034 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 2093
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 2094 tcctgcttgggtgggctaacgagtccgaca 2123
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||| |||||||| |||||||| | |||||||| ||||| |||||||| || || ||||
Sbjct: 1317 tgtattacaagggatggtaccacctattctaccagtacaaccccaagggagctgtgtggg 1376
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
|||| ||||||||||| |||||||| || | ||||||||||||||| | || || ||||
Sbjct: 1377 gcaatatcgtgtgggctcactcggtatcacaggacctcatcaactggatagcccttgagc 1436
Query: 374 cggc 377
||||
Sbjct: 1437 cggc 1440
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 3682 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 3741
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 3742 tacccgtcgatggc 3755
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 2342 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 2401
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 2402 atcgaggagctggagacgctgag 2424
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 2900 caggctgacgtggaggtgagcttggaggtgtc 2931
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 1817 tcggcgctcactgggatgtgggagtgcccagacttct 1853
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 889584 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 889643
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 889644 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 889700
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 889701 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 889760
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 889761 tgtgcaccgaccctaccaagt 889781
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 888543 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 888602
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 888603 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 888662
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 888663 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 888722
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 888723 tcctgcttgggtgggctaacgagtccgaca 888752
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||| |||||||| |||||||| | |||||||| ||||| |||||||| || || ||||
Sbjct: 887946 tgtattacaagggatggtaccacctattctaccagtacaaccccaagggagctgtgtggg 888005
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
|||| ||||||||||| |||||||| || | ||||||||||||||| | || || ||||
Sbjct: 888006 gcaatatcgtgtgggctcactcggtatcacaggacctcatcaactggatagcccttgagc 888065
Query: 374 cggc 377
||||
Sbjct: 888066 cggc 888069
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 890311 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 890370
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 890371 tacccgtcgatggc 890384
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 886354 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 886413
Query: 225 gaactggatcaa 236
||||||||||||
Sbjct: 886414 gaactggatcaa 886425
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 888971 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 889030
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 889031 atcgaggagctggagacgctgag 889053
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 889529 caggctgacgtggaggtgagcttggaggtgtc 889560
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 888446 tcggcgctcactgggatgtgggagtgcccagacttct 888482
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 6098671 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 6098730
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 6098731 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 6098787
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 6098788 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 6098847
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 6098848 tgtgcaccgaccctaccaagt 6098868
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 6097630 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 6097689
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 6097690 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 6097749
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 6097750 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 6097809
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 6097810 tcctgcttgggtgggctaacgagtccgaca 6097839
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||| |||||||| |||||||| | |||||||| ||||| |||||||| || || ||||
Sbjct: 6097033 tgtattacaagggatggtaccacctattctaccagtacaaccccaagggagctgtgtggg 6097092
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
|||| ||||||||||| |||||||| || | ||||||||||||||| | || || ||||
Sbjct: 6097093 gcaatatcgtgtgggctcactcggtatcacaggacctcatcaactggatagcccttgagc 6097152
Query: 374 cggc 377
||||
Sbjct: 6097153 cggc 6097156
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 6099398 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 6099457
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 6099458 tacccgtcgatggc 6099471
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 6098058 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 6098117
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 6098118 atcgaggagctggagacgctgag 6098140
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 6098616 caggctgacgtggaggtgagcttggaggtgtc 6098647
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 6097533 tcggcgctcactgggatgtgggagtgcccagacttct 6097569
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 19551735 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 19551794
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 19551795 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 19551851
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 19551852 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 19551911
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 19551912 tgtgcaccgaccctaccaagt 19551932
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 19550694 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 19550753
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 19550754 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 19550813
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 19550814 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 19550873
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 19550874 tcctgcttgggtgggctaacgagtccgaca 19550903
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||| |||||||| |||||||| | |||||||| ||||| |||||||| || || ||||
Sbjct: 19550097 tgtattacaagggatggtaccacctattctaccagtacaaccccaagggagctgtgtggg 19550156
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
|||| ||||||||||| |||||||| || | ||||||||||||||| | || || ||||
Sbjct: 19550157 gcaatatcgtgtgggctcactcggtatcacaggacctcatcaactggatagcccttgagc 19550216
Query: 374 cggc 377
||||
Sbjct: 19550217 cggc 19550220
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 19552462 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 19552521
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 19552522 tacccgtcgatggc 19552535
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 19551122 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 19551181
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 19551182 atcgaggagctggagacgctgag 19551204
Score = 71.9 bits (36), Expect = 1e-009
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| |||||||||| ||||| ||||| || |||||||| |||||||| ||||||||||
Sbjct: 329119 gcctccgctacgactggggcaagttctatgcctccaagaccttctacgatccggccaagc 329178
Query: 1046 ggcgccgcatcctgtggggctggg 1069
| |||||| |||| ||||| ||||
Sbjct: 329179 gccgccgcgtcctctggggttggg 329202
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 773 ccacggggatgtgggagtgccccgacttctacccggtg 810
|||||||||||||||||||| ||||||||||||||||
Sbjct: 328906 ccacggggatgtgggagtgcatcgacttctacccggtg 328943
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 19551680 caggctgacgtggaggtgagcttggaggtgtc 19551711
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 19550597 tcggcgctcactgggatgtgggagtgcccagacttct 19550633
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||| | | | |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 19705342 tggacccggcgttcggcgacgacgcggagaggctgtgcggcgcgaagggcgcggacgtga 19705401
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
|||||||||||| |||||||||||||||||||||||||||| || |||||| ||
Sbjct: 19705402 ggggcggcgtgg---tgttcgggctgtgggtgctggcctccgccggcctggaggagaaaa 19705458
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgccg---ccggcgacaagcccgtggtgctca 1519
|||| || |||||| | || |||||||| |||| ||||| ||||||||| || ||||
Sbjct: 19705459 ccgccgtcttcttccgcgtcttcaagccggccgggcacggcgccaagcccgtcgtcctca 19705518
Query: 1520 tgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||
Sbjct: 19705519 tgtgcaccgaccctaccaagt 19705539
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 19704301 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 19704360
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 19704361 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 19704420
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 19704421 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 19704480
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 19704481 tcctgcttgggtgggctaacgagtccgaca 19704510
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||| |||||||| |||||||| | |||||||| ||||| |||||||| || || ||||
Sbjct: 19703704 tgtattacaagggatggtaccacctattctaccagtacaaccccaagggagctgtgtggg 19703763
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
|||| ||||||||||| |||||||| || | ||||||||||||||| | || || ||||
Sbjct: 19703764 gcaatatcgtgtgggctcactcggtatcacaggacctcatcaactggatagcccttgagc 19703823
Query: 374 cggc 377
||||
Sbjct: 19703824 cggc 19703827
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 19706069 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 19706128
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 19706129 tacccgtcgatggc 19706142
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| || ||||||||||||||||| |
Sbjct: 19702112 ggtgccggcctccattgtcagccccctgctcaggacaggataccacttccagcccccgat 19702171
Query: 225 gaactggatcaa 236
||||||||||||
Sbjct: 19702172 gaactggatcaa 19702183
Score = 77.8 bits (39), Expect = 2e-011
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 1123 caggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcct 1182
||||| || ||||| | ||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 19704729 caggcgatcccaagaaaggtatggctggacccgagcgggaagcagcttctgcagtggcca 19704788
Query: 1183 atcgaggaggtggaggcgctgag 1205
||||||||| ||||| |||||||
Sbjct: 19704789 atcgaggagctggagacgctgag 19704811
Score = 71.9 bits (36), Expect = 1e-009
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| |||||||||| ||||| ||||| || |||||||| |||||||| ||||||||||
Sbjct: 344688 gcctccgctacgactggggcaagttctatgcctccaagaccttctacgatccggccaagc 344747
Query: 1046 ggcgccgcatcctgtggggctggg 1069
| |||||| |||| ||||| ||||
Sbjct: 344748 gccgccgcgtcctctggggttggg 344771
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 773 ccacggggatgtgggagtgccccgacttctacccggtg 810
|||||||||||||||||||| ||||||||||||||||
Sbjct: 344475 ccacggggatgtgggagtgcatcgacttctacccggtg 344512
Score = 56.0 bits (28), Expect = 8e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtc 1313
||||||||||||||||||||||| ||||||||
Sbjct: 19705287 caggctgacgtggaggtgagcttggaggtgtc 19705318
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 19704204 tcggcgctcactgggatgtgggagtgcccagacttct 19704240
>gb|CB656759.1|CB656759 OSJNEc11H12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H12 3', mRNA sequence
Length = 782
Score = 159 bits (80), Expect = 7e-036
Identities = 235/286 (82%), Gaps = 3/286 (1%)
Strand = Plus / Minus
Query: 1424 ggctgtgggtgctggcctccgccaaccgcaaggagagaaccgcggtgttcttcagggtgt 1483
||||||||||||||||||||||| || |||||| |||||| || |||||| | || |
Sbjct: 782 ggctgtgggtgctggcctccgccggcctggaggagaaaaccgccgtcttcttccgcgtct 723
Query: 1484 tcaagcccgccgc---cggcgacaagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||| |||| ||||| ||||||||| || |||||||||||||||||||||||||
Sbjct: 722 tcaagccggccgggcacggcgccaagcccgtcgtcctcatgtgcaccgaccctaccaagt 663
Query: 1541 cgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatct 1600
| || | | |||| | || ||| || || ||||| || || |||||||| |||||||
Sbjct: 662 cttctcttagcccggatctctacaagccaacttttgccgggttcgtcgacaccgacatct 603
Query: 1601 cgaacggcaagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggag 1660
|| ||| ||||| ||| |||||||| |||| ||||| ||||| |||||||||||||| |
Sbjct: 602 cgtccgggaagatctccttgagaagcttgattgaccgttcggtggttgagagcttcggcg 543
Query: 1661 ccgggggcaagacctgcatcctctccagggtctacccgtcgctggc 1706
|||||||||||||||||||||| || || || ||||||||| ||||
Sbjct: 542 ccgggggcaagacctgcatcctgtcgagagtttacccgtcgatggc 497
>gb|CB656731.1|CB656731 OSJNEc11G13.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11G13 3', mRNA sequence
Length = 802
Score = 139 bits (70), Expect = 7e-030
Identities = 175/210 (83%)
Strand = Plus / Minus
Query: 1497 cggcgacaagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaa 1556
||||| ||||||||| || |||||||||||||||||||||||||| || | | |||| |
Sbjct: 756 cggcgccaagcccgtcgtcctcatgtgcaccgaccctaccaagtcttctcttagcccgga 697
Query: 1557 cctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatc 1616
|| ||| || || ||||| || || |||||||| ||||||||| ||| ||||| ||
Sbjct: 696 tctctacaagccaacttttgccgggttcgtcgacaccgacatctcgtccgggaagatctc 637
Query: 1617 cctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctg 1676
| |||||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 636 cttgagaagcttgattgaccgttcggtggttgagagcttcggcgccgggggcaagacctg 577
Query: 1677 catcctctccagggtctacccgtcgctggc 1706
|||||| || || || ||||||||| ||||
Sbjct: 576 catcctgtcgagagtttacccgtcgatggc 547
>gb|CB665440.1|CB665440 OSJNEd11N18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11N18 3', mRNA sequence
Length = 771
Score = 139 bits (70), Expect = 7e-030
Identities = 175/210 (83%)
Strand = Plus / Minus
Query: 1497 cggcgacaagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaa 1556
||||| ||||||||| || |||||||||||||||||||||||||| || | | |||| |
Sbjct: 710 cggcgccaagcccgtcgtcctcatgtgcaccgaccctaccaagtcttctcttagcccgga 651
Query: 1557 cctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatc 1616
|| ||| || || ||||| || || |||||||| ||||||||| ||| ||||| ||
Sbjct: 650 tctctacaagccaacttttgccgggttcgtcgacaccgacatctcgtccgggaagatctc 591
Query: 1617 cctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctg 1676
| |||||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 590 cttgagaagcttgattgaccgttcggtggttgagagcttcggcgccgggggcaagacctg 531
Query: 1677 catcctctccagggtctacccgtcgctggc 1706
|||||| || || || ||||||||| ||||
Sbjct: 530 catcctgtcgagagtttacccgtcgatggc 501
>dbj|AK120779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009M11, full
insert sequence
Length = 2289
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 996 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 1055
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 1056 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 1097
Score = 137 bits (69), Expect = 3e-029
Identities = 156/185 (84%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaatgatcccaacgcgcc 251
|||| |||| |||||||||||||| || |||||| |||||||||| ||||| |||| ||
Sbjct: 196 gctccggaccgggtaccacttccaaccacccaagcactggatcaacgatccgaacggtcc 255
Query: 252 catgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatg 311
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| ||
Sbjct: 256 gatgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtg 315
Query: 312 gggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctaga 371
||| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| ||
Sbjct: 316 ggggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctgga 375
Query: 372 gccgg 376
|||||
Sbjct: 376 gccgg 380
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 1409 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 1468
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 1469 gccgtcttcttcagggtgttcaag 1492
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 743 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 788
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 564 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 622
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 623 accgcctgg 631
>gb|AACV01009702.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009702, whole
genome shotgun sequence
Length = 11577
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 8135 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 8076
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 8075 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 8034
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 7538 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 7479
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 7478 gccgtcttcttcagggtgttcaag 7455
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 253 atgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgg 312
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| |||
Sbjct: 8874 atgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtgg 8815
Query: 313 ggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagag 372
|| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| |||
Sbjct: 8814 gggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctggag 8755
Query: 373 ccgg 376
||||
Sbjct: 8754 ccgg 8751
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 8388 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 8343
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||| |||| |||||||||||||| || |||||| ||||||||||
Sbjct: 9158 gctccggaccgggtaccacttccaaccacccaagcactggatcaa 9114
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 8567 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 8509
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 8508 accgcctgg 8500
>ref|XM_472408.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1752
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 926 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 985
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 986 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 1027
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 1339 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 1398
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 1399 gccgtcttcttcagggtgttcaag 1422
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 253 atgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatgg 312
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| |||
Sbjct: 187 atgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtgg 246
Query: 313 ggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagag 372
|| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| |||
Sbjct: 247 gggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctggag 306
Query: 373 ccgg 376
||||
Sbjct: 307 ccgg 310
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 673 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 718
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 494 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 552
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 553 accgcctgg 561
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||| |||| |||||||||||||| || |||||| ||||||||||
Sbjct: 135 gctccggaccgggtaccacttccaaccacccaagcactggatcaa 179
>gb|AY578160.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 3 mRNA,
complete cds
Length = 1911
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 986 gcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagc 1045
|||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 962 gcctccgctacgactacggcgacttctacgcatccaagtcgttctacgacccggccaagc 1021
Query: 1046 ggcgccgcatcctgtggggctgggctaacgagtccgacaccg 1087
| ||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 1022 gccgccgcatcgtctggggctgggccaacgagtccgacaccg 1063
Score = 137 bits (69), Expect = 3e-029
Identities = 156/185 (84%)
Strand = Plus / Plus
Query: 192 gctcaggacggggtaccacttccagccccccaagaactggatcaatgatcccaacgcgcc 251
|||| |||| |||||||||||||| || |||||| |||||||||| ||||| |||| ||
Sbjct: 162 gctccggaccgggtaccacttccaaccacccaagcactggatcaacgatccgaacggtcc 221
Query: 252 catgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatg 311
|||||||| ||||| | ||||||| | |||||||| ||||| |||||||||||||| ||
Sbjct: 222 gatgtactataagggcttgtaccatctgttctaccagtacaaccccaagggcgccgtgtg 281
Query: 312 gggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctaga 371
||| ||||||| ||||||||||||||| ||| ||||| ||| ||||| |||||| ||
Sbjct: 282 ggggaacatcgagtgggcgcactcggtttcgacggacctgatcgactggacggcgctgga 341
Query: 372 gccgg 376
|||||
Sbjct: 342 gccgg 346
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||
Sbjct: 1375 ggcggcgtggggccgttcgggctgtgggcgctggcctccggcgacctcaaggagaggacg 1434
Query: 1465 gcggtgttcttcagggtgttcaag 1488
|| || ||||||||||||||||||
Sbjct: 1435 gccgtcttcttcagggtgttcaag 1458
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttct 802
|||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 709 ccgctgcactcggcgcacaccgggatgtgggagtgcccggacttct 754
Score = 50.1 bits (25), Expect = 0.005
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 569 acaaccccgtcatcgtccccgagggcggcatcaacgcga-cgcagttccgcgacccgacc 627
|||||||| ||||| ||| || |||||||||||||| | ||| ||||||||||||||||
Sbjct: 530 acaaccccatcatcaacccggacggcggcatcaacgccagcgc-gttccgcgacccgacc 588
Query: 628 acggcctgg 636
|| ||||||
Sbjct: 589 accgcctgg 597
>gb|CB670406.1|CB670406 OSJNEe03H08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03H08 3', mRNA sequence
Length = 747
Score = 131 bits (66), Expect = 2e-027
Identities = 174/210 (82%)
Strand = Plus / Minus
Query: 1497 cggcgacaagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaa 1556
||||| ||||||||| || ||||||||||||||||||||||||| || | | |||| |
Sbjct: 677 cggcgccaagcccgtcgtcttcatgtgcaccgaccctaccaagtcttctcttagcccgga 618
Query: 1557 cctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatc 1616
|| ||| || || ||||| || || |||||||| ||||||||| ||| ||||| ||
Sbjct: 617 tctctacaagccaacttttgccgggttcgtcgacaccgacatctcgtccgggaagatctc 558
Query: 1617 cctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctg 1676
| |||||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 557 cttgagaagcttgattgaccgttcggtggttgagagcttcggcgccgggggcaagacctg 498
Query: 1677 catcctctccagggtctacccgtcgctggc 1706
|||||| || || || ||||||||| ||||
Sbjct: 497 catcctgtcgagagtttacccgtcgatggc 468
>gb|CB656757.1|CB656757 OSJNEc11H11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H11 3', mRNA sequence
Length = 722
Score = 125 bits (63), Expect = 1e-025
Identities = 168/203 (82%)
Strand = Plus / Minus
Query: 1497 cggcgacaagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaa 1556
||||| ||||||||| || |||||||||||||||||||||||||| || | |||| |
Sbjct: 712 cggcgccaagcccgtcgtcctcatgtgcaccgaccctaccaagtcttcttttagcccgga 653
Query: 1557 cctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatc 1616
|| ||| || || ||||| || || |||||||| ||||||||| ||| ||||| ||
Sbjct: 652 tctctacaagccaacttttgccgggttagtcgacaccgacatctcgtccgggaagatctc 593
Query: 1617 cctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctg 1676
| |||||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 592 cttgagaagcttgattgaccgttcggtggttgagagcttcggcgccgggggcaagacctg 533
Query: 1677 catcctctccagggtctacccgt 1699
|||||| || || || |||||||
Sbjct: 532 catcctgtcgagagtttacccgt 510
>gb|CB647639.1|CB647639 OSJNEb10K09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10K09 3', mRNA sequence
Length = 659
Score = 123 bits (62), Expect = 4e-025
Identities = 116/134 (86%)
Strand = Plus / Minus
Query: 1573 tttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctgatc 1632
||||| || ||||||||||| ||||||||| ||| ||||| ||| |||||||| ||||
Sbjct: 615 tttgccgggtttgtcgacaccgacatctcgtccgggaagatctccttgagaagcttgatt 556
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 555 gaccgttcggtggttgagagcttcggcgccgggggcaagacctgcatcctgtcgagagtt 496
Query: 1693 tacccgtcgctggc 1706
||||||||| ||||
Sbjct: 495 tacccgtcgatggc 482
>gb|CB656697.1|CB656697 OSJNEc11F13.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F13 3', mRNA sequence
Length = 760
Score = 123 bits (62), Expect = 4e-025
Identities = 208/256 (81%), Gaps = 3/256 (1%)
Strand = Plus / Minus
Query: 1454 aggagagaaccgcggtgttcttcagggtgttcaagcccgccgc---cggcgacaagcccg 1510
|||||| |||||| || |||||| | ||||||||||| |||| ||||| ||||||||
Sbjct: 759 aggagaaaaccgccgtcttcttccgcgtgttcaagccggccgggcacggcgccaagcccg 700
Query: 1511 tggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtaccgcccga 1570
| || ||||||||||||||||||||||||| || | |||| | || ||| || |
Sbjct: 699 tcgtcttcatgtgcaccgaccctaccaagtcttctgttagcccggatctctacaagccaa 640
Query: 1571 catttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctga 1630
| ||||| || || |||||||| ||||||||| ||| ||||| ||| |||||||| |||
Sbjct: 639 cttttgccgggttcgtcgacaccgacatctcgtccgggaagatctccttgagaagcttga 580
Query: 1631 tcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccaggg 1690
| ||||| ||||| |||||||| ||||| ||||||||||||||||||||||| || || |
Sbjct: 579 ttgaccgttcggtggttgagagattcggcgccgggggcaagacctgcatcctgtcgagag 520
Query: 1691 tctacccgtcgctggc 1706
| ||||||||| ||||
Sbjct: 519 tttacccgtcgatggc 504
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full
insert sequence
Length = 1517
Score = 123 bits (62), Expect = 4e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
|||||||||||||||||||||| ||| || || ||||||||||| ||||||| |||
Sbjct: 1159 acgtgctcaagaacagcctcgatctcacccgttatgactactacacggtgggcatctaca 1218
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
|| | | | |||||||| ||||||||| |||| || |||||| | ||||| || ||||
Sbjct: 1219 acaaggtgacggagcggtatgtgccggacaaccctgctggcgactaccaccggctccgct 1278
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
| |||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||
Sbjct: 1279 atgactacggcaacttctacgcatcaaagaccttcttcgacccggtgaagcaccgccgca 1338
Query: 1055 tcctgtggggctgggctaacgagtccgaca 1084
||||| || |||||||||||||||||||
Sbjct: 1339 tcctgcttgggtgggctaacgagtccgaca 1368
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 766 tcggcgcccacggggatgtgggagtgccccgacttct 802
||||||| ||| ||||||||||||||||| |||||||
Sbjct: 1062 tcggcgctcactgggatgtgggagtgcccagacttct 1098
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,378,959
Number of Sequences: 438736
Number of extensions: 3378959
Number of successful extensions: 32729
Number of sequences better than 0.5: 137
Number of HSP's better than 0.5 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29980
Number of HSP's gapped (non-prelim): 2648
length of query: 2027
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2005
effective length of database: 2,790,767,724
effective search space: 5595489286620
effective search space used: 5595489286620
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)