BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485939.2.1
(530 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_466990.1| Oryza sativa (japonica cultivar-group), mRNA 454 e-125
gb|AU062424.2|AU062424 AU062424 Rice callus Oryza sativa (j... 331 2e-088
dbj|AK107135.1| Oryza sativa (japonica cultivar-group) cDNA... 311 2e-082
ref|XM_473291.1| Oryza sativa (japonica cultivar-group), p... 311 2e-082
gb|AU062529.1|AU062529 AU062529 Rice callus Oryza sativa (j... 307 3e-081
gb|AU063524.1|AU063524 AU063524 Rice callus Oryza sativa (j... 260 7e-067
gb|AZ131108.1|AZ131108 OSJNBb0104L14f CUGI Rice BAC Library... 208 2e-051
dbj|AP004788.1| Oryza sativa (japonica cultivar-group) chro... 208 2e-051
dbj|AP004133.3| Oryza sativa (japonica cultivar-group) geno... 208 2e-051
dbj|AP004768.3| Oryza sativa (japonica cultivar-group) geno... 208 2e-051
gb|AACV01005009.1| Oryza sativa (japonica cultivar-group) c... 208 2e-051
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 208 2e-051
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 208 2e-051
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 208 2e-051
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 208 2e-051
dbj|AK109796.1| Oryza sativa (japonica cultivar-group) cDNA... 153 1e-034
gb|AACV01010177.1| Oryza sativa (japonica cultivar-group) c... 153 1e-034
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 153 1e-034
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 153 1e-034
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 153 1e-034
emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromoso... 153 1e-034
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 153 1e-034
ref|XM_463865.1| Oryza sativa (japonica cultivar-group), mRNA 125 3e-026
ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA 86 2e-014
dbj|AP004090.3| Oryza sativa (japonica cultivar-group) geno... 82 3e-013
gb|AACV01003205.1| Oryza sativa (japonica cultivar-group) c... 82 3e-013
dbj|AP004867.2| Oryza sativa (japonica cultivar-group) geno... 82 3e-013
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 82 3e-013
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 82 3e-013
gb|AQ325721.1|AQ325721 nbxb0020A23f CUGI Rice BAC Library O... 80 1e-012
dbj|AK064679.1| Oryza sativa (japonica cultivar-group) cDNA... 80 1e-012
gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 ... 80 1e-012
ref|NM_189302.1| Oryza sativa (japonica cultivar-group), p... 80 1e-012
ref|XM_470673.1| Oryza sativa (japonica cultivar-group), mRNA 80 1e-012
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 80 1e-012
emb|Y11351.1|OSMYB1402 O.sativa mRNA for myb factor, 1402 bp 80 1e-012
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 80 1e-012
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 80 1e-012
gb|D47363.1|D47363 RICS12691A Rice green shoot Oryza sativa... 76 2e-011
dbj|AK111782.1| Oryza sativa (japonica cultivar-group) cDNA... 76 2e-011
gb|AACV01002173.1| Oryza sativa (japonica cultivar-group) c... 76 2e-011
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 76 2e-011
ref|XM_472754.1| Oryza sativa (japonica cultivar-group), p... 76 2e-011
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 76 2e-011
dbj|AP003245.4| Oryza sativa (japonica cultivar-group) geno... 76 2e-011
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 76 2e-011
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 76 2e-011
dbj|AK108621.1| Oryza sativa (japonica cultivar-group) cDNA... 74 8e-011
ref|NM_192221.1| Oryza sativa (japonica cultivar-group), p... 74 8e-011
ref|XM_466994.1| Oryza sativa (japonica cultivar-group), mRNA 74 8e-011
dbj|AK109011.1| Oryza sativa (japonica cultivar-group) cDNA... 72 3e-010
gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNB... 72 3e-010
gb|AC118285.2| Oryza sativa (japonica cultivar-group) chrom... 72 3e-010
gb|AC098833.2| Oryza sativa (japonica cultivar-group) chrom... 72 3e-010
gb|AACV01012646.1| Oryza sativa (japonica cultivar-group) c... 72 3e-010
gb|AACV01021797.1| Oryza sativa (japonica cultivar-group) c... 72 3e-010
ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA 72 3e-010
ref|NM_197015.1| Oryza sativa (japonica cultivar-group) put... 72 3e-010
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 72 3e-010
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 72 3e-010
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 72 3e-010
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 72 3e-010
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 72 3e-010
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 72 3e-010
emb|Y11350.1|OSMYB1084 O.sativa mRNA for myb factor, 1084 bp 72 3e-010
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 72 3e-010
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 72 3e-010
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 72 3e-010
gb|C72644.1|C72644 C72644 Rice panicle at flowering stage O... 68 5e-009
gb|BP432988.1|BP432988 BP432988 Oryza sativa (japonica cult... 68 5e-009
gb|AY323484.1| Oryza sativa (japonica cultivar-group) myb-r... 68 5e-009
ref|XM_473184.1| Oryza sativa (japonica cultivar-group), p... 68 5e-009
emb|Y11414.1|OSMYB1202 O.sativa mRNA for myb factor, 1202 bp 68 5e-009
gb|CB658779.1|CB658779 OSJNEc15B08.f OSJNEc Oryza sativa (j... 66 2e-008
gb|CB665378.1|CB665378 OSJNEd11L19.f OSJNEd Oryza sativa (j... 66 2e-008
gb|CB665379.1|CB665379 OSJNEd11L19.r OSJNEd Oryza sativa (j... 66 2e-008
gb|CB665403.1|CB665403 OSJNEd11M19.r OSJNEd Oryza sativa (j... 66 2e-008
gb|AY026332.1| Oryza sativa Myb transcription factor JAMyb ... 66 2e-008
dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
dbj|AK111960.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC O... 66 2e-008
gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone... 66 2e-008
gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone... 66 2e-008
gb|AC123525.2| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 66 2e-008
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 66 2e-008
gb|AC135190.2| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|AACV01001493.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
gb|AACV01022281.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
gb|AACV01023759.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
gb|AACV01023895.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
ref|NM_192243.1| Oryza sativa (japonica cultivar-group), p... 66 2e-008
ref|NM_193333.1| Oryza sativa (japonica cultivar-group), p... 66 2e-008
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 66 2e-008
dbj|AP004231.3| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
dbj|AP004232.4| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
emb|Y11352.1|OSMYB1308 O.sativa mRNA for myb factor, 1308 bp 66 2e-008
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|AQ287492.1|AQ287492 nbxb0030K04r CUGI Rice BAC Library O... 64 8e-008
gb|AQ051267.1|AQ051267 nbxb0001cF08f CUGI Rice BAC Library ... 64 8e-008
gb|AQ688548.1|AQ688548 nbxb0077J20f CUGI Rice BAC Library O... 64 8e-008
gb|C72014.1|C72014 C72014 Rice panicle at flowering stage O... 64 8e-008
gb|CB643957.1|CB643957 OSJNEb04P04.f OSJNEb Oryza sativa (j... 64 8e-008
gb|CB682826.1|CB682826 OSJNEf10I12.f OSJNEf Oryza sativa (j... 64 8e-008
gb|AC090973.1|AC090973 Oryza sativa (japonica cultivar-grou... 64 8e-008
gb|AF474135.1| Oryza sativa typical P-type R2R3 Myb protein... 64 8e-008
gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein... 64 8e-008
dbj|AK109125.1| Oryza sativa (japonica cultivar-group) cDNA... 64 8e-008
dbj|AK111798.1| Oryza sativa (japonica cultivar-group) cDNA... 64 8e-008
dbj|AK111808.1| Oryza sativa (japonica cultivar-group) cDNA... 64 8e-008
dbj|AK112117.1| Oryza sativa (japonica cultivar-group) cDNA... 64 8e-008
gb|AY459337.1| Oryza sativa (japonica cultivar-group) clone... 64 8e-008
gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone... 64 8e-008
gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbar... 64 8e-008
gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O0... 64 8e-008
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
dbj|AP002871.2| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
dbj|AP002873.2| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
gb|AACV01000343.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
gb|AACV01000813.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
gb|AACV01000840.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
gb|AACV01006437.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
gb|AACV01010119.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
gb|AACV01016862.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
gb|AACV01017273.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
gb|AACV01021882.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
ref|NM_183669.1| Oryza sativa (japonica cultivar-group), p... 64 8e-008
ref|NM_193128.1| Oryza sativa (japonica cultivar-group), mRNA 64 8e-008
ref|NM_197198.1| Oryza sativa (japonica cultivar-group) put... 64 8e-008
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 64 8e-008
ref|XM_468625.1| Oryza sativa (japonica cultivar-group), mRNA 64 8e-008
ref|XM_480122.1| Oryza sativa (japonica cultivar-group), mRNA 64 8e-008
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 64 8e-008
dbj|AP002743.1| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
dbj|AP002746.2| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
ref|NM_189671.1| Oryza sativa (japonica cultivar-group), p... 64 8e-008
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 64 8e-008
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 64 8e-008
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 64 8e-008
dbj|AP004334.2| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
dbj|AP003752.3| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 64 8e-008
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 64 8e-008
dbj|AP003140.2| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
dbj|AP002883.2| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromoso... 64 8e-008
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
gb|CG408359.1|CG408359 Ds49 Ds insertion lines Oryza sativa... 62 3e-007
gb|CZ556964.1|CZ556964 M0032739 AS_TRIM_TDNA_B1 Oryza sativ... 62 3e-007
gb|CV720744.1|CV720744 YBH--01-L04.b1 Rice before heading y... 62 3e-007
gb|BP184381.1|BP184381 BP184381 pNS rice panicle cDNA, germ... 62 3e-007
dbj|AK066834.1| Oryza sativa (japonica cultivar-group) cDNA... 62 3e-007
dbj|AK099108.1| Oryza sativa (japonica cultivar-group) cDNA... 62 3e-007
dbj|AK099283.1| Oryza sativa (japonica cultivar-group) cDNA... 62 3e-007
dbj|AK104053.1| Oryza sativa (japonica cultivar-group) cDNA... 62 3e-007
dbj|AK111807.1| Oryza sativa (japonica cultivar-group) cDNA... 62 3e-007
dbj|AP004083.2| Oryza sativa (japonica cultivar-group) geno... 62 3e-007
dbj|AP003980.3| Oryza sativa (japonica cultivar-group) geno... 62 3e-007
dbj|AP005686.3| Oryza sativa (japonica cultivar-group) geno... 62 3e-007
dbj|AP005747.3| Oryza sativa (japonica cultivar-group) geno... 62 3e-007
gb|AACV01002207.1| Oryza sativa (japonica cultivar-group) c... 62 3e-007
gb|AACV01004921.1| Oryza sativa (japonica cultivar-group) c... 62 3e-007
gb|AACV01020037.1| Oryza sativa (japonica cultivar-group) c... 62 3e-007
ref|NM_191687.1| Oryza sativa (japonica cultivar-group), p... 62 3e-007
ref|XM_466772.1| Oryza sativa (japonica cultivar-group), mRNA 62 3e-007
ref|XM_473295.1| Oryza sativa (japonica cultivar-group), p... 62 3e-007
ref|XM_475269.1| Oryza sativa (japonica cultivar-group), p... 62 3e-007
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 62 3e-007
ref|XM_506868.1| PREDICTED Oryza sativa (japonica cultivar-... 62 3e-007
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 62 3e-007
dbj|AP002901.2| Oryza sativa (japonica cultivar-group) geno... 62 3e-007
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 62 3e-007
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 62 3e-007
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 62 3e-007
gb|AQ914539.1|AQ914539 nbeb0049K13r CUGI Rice BAC Library (... 60 1e-006
gb|D47255.1|D47255 RICS12518A Rice green shoot Oryza sativa... 60 1e-006
gb|C74379.1|C74379 C74379 Rice panicle shorter than 3cm Ory... 60 1e-006
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 60 1e-006
gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 ... 60 1e-006
gb|AC120990.3| Oryza sativa (japonica cultivar-group) chrom... 60 1e-006
gb|AC120986.2| Oryza sativa (japonica cultivar-group) chrom... 60 1e-006
gb|AACV01006536.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
gb|AACV01012726.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
gb|AACV01016284.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
ref|NT_107221.1| Oryza sativa (japonica cultivar-group) 60 1e-006
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 60 1e-006
dbj|AP004259.2| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
dbj|AP004006.5| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|CB656158.1|CB656158 OSJNEc10C21.f OSJNEc Oryza sativa (j... 58 5e-006
gb|AF474137.1| Oryza sativa typical P-type R2R3 Myb protein... 58 5e-006
dbj|AP004567.1| Oryza sativa (japonica cultivar-group) chro... 58 5e-006
dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chro... 58 5e-006
gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 ... 58 5e-006
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
dbj|AP005636.2| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
gb|AACV01006769.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01010414.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01018749.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01019979.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
ref|XM_470783.1| Oryza sativa (japonica cultivar-group), mRNA 58 5e-006
ref|XM_482584.1| Oryza sativa (japonica cultivar-group), mRNA 58 5e-006
dbj|AP004376.3| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromoso... 58 5e-006
emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromoso... 58 5e-006
gb|AQ255921.1|AQ255921 nbxb0014H01r CUGI Rice BAC Library O... 56 2e-005
gb|AQ325627.1|AQ325627 nbxb0015P21f CUGI Rice BAC Library O... 56 2e-005
gb|AQ364476.2|AQ364476 nbxb0061G19f CUGI Rice BAC Library O... 56 2e-005
gb|CZ555484.1|CZ555484 M0027756 AS_TRIM_TDNA_B1 Oryza sativ... 56 2e-005
gb|CA755385.1|CA755385 BR030019000_PLATE_E12_93_098.ab1 OA ... 56 2e-005
gb|CB645415.1|CB645415 OSJNEb07B02.f OSJNEb Oryza sativa (j... 56 2e-005
gb|CV728451.1|CV728451 COLD--01-H09.b1 Cold treated rice le... 56 2e-005
emb|X96750.1|OSMYB71 O.sativa myb7 gene, clone myb71 56 2e-005
dbj|AP002912.2| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
dbj|AK072403.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AK108452.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC O... 56 2e-005
gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone... 56 2e-005
gb|AC093956.2| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 56 2e-005
gb|AACV01000256.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01004769.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01010181.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01010415.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01012680.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01018553.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01025277.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
dbj|AP003339.4| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
ref|XM_462803.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_475870.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 56 2e-005
ref|XM_550262.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
emb|X96749.1|OSMYB72 O.sativa myb7 gene, clone myb72 56 2e-005
gb|AU183276.1|AU183276 AU183276 Rice cDNA from immature lea... 54 8e-005
dbj|AK060684.1| Oryza sativa (japonica cultivar-group) cDNA... 54 8e-005
emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC O... 54 8e-005
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 54 8e-005
gb|AACV01025049.1| Oryza sativa (japonica cultivar-group) c... 54 8e-005
ref|NM_190827.1| Oryza sativa (japonica cultivar-group), p... 54 8e-005
ref|XM_472825.1| Oryza sativa (japonica cultivar-group), p... 54 8e-005
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 54 8e-005
gb|BP184885.1|BP184885 BP184885 pNS rice callus cDNA Oryza ... 52 3e-004
gb|AF474134.1| Oryza sativa typical P-type R2R3 Myb protein... 52 3e-004
gb|AF474136.1| Oryza sativa typical P-type R2R3 Myb protein... 52 3e-004
gb|AF474140.1| Oryza sativa typical P-type R2R3 Myb protein... 52 3e-004
dbj|AK108259.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK109620.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
gb|AY459342.1| Oryza sativa (japonica cultivar-group) clone... 52 3e-004
gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone... 52 3e-004
gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 ... 52 3e-004
dbj|AP005652.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|AACV01002155.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01002252.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01006722.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01009955.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01010086.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01013245.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 52 3e-004
dbj|AB111867.1| Oryza sativa (japonica cultivar-group) C ge... 52 3e-004
dbj|AB111868.1| Oryza sativa (japonica cultivar-group) C ge... 52 3e-004
dbj|AB111870.1| Oryza sativa (japonica cultivar-group) C ge... 52 3e-004
dbj|AB111871.1| Oryza sativa (japonica cultivar-group) C ge... 52 3e-004
ref|NM_191815.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_463409.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_470731.1| Oryza sativa (japonica cultivar-group), mRNA 52 3e-004
ref|XM_473120.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 52 3e-004
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
dbj|AP003292.2| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
dbj|AP003229.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 52 3e-004
emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromoso... 52 3e-004
emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromoso... 52 3e-004
emb|X89605.1|OSMYB7 O.sativa mRNA for myb 7 protein 52 3e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|AQ870080.1|AQ870080 nbeb0036L11r CUGI Rice BAC Library (... 50 0.001
dbj|AG214248.1| Oryza sativa (japonica cultivar-group) DNA,... 50 0.001
dbj|AG214727.1| Oryza sativa (japonica cultivar-group) DNA,... 50 0.001
dbj|AB157659.1| Oryza sativa (japonica cultivar-group) DNA,... 50 0.001
gb|C73657.1|C73657 C73657 Rice panicle (longer than 10cm) O... 50 0.001
gb|AU082166.1|AU082166 AU082166 Rice cDNA from young root O... 50 0.001
gb|AU082322.1|AU082322 AU082322 Rice panicle (longer than 1... 50 0.001
gb|AU082324.1|AU082324 AU082324 Rice panicle (longer than 1... 50 0.001
gb|AU082325.1|AU082325 AU082325 Rice panicle (longer than 1... 50 0.001
gb|AU083547.1|AU083547 AU083547 Rice green shoot Oryza sati... 50 0.001
gb|AU094689.1|AU094689 AU094689 Rice panicle (longer than 1... 50 0.001
gb|AU173093.1|AU173093 AU173093 Rice root Oryza sativa (jap... 50 0.001
gb|AU184006.1|AU184006 AU184006 Rice root Oryza sativa (jap... 50 0.001
gb|CA758808.1|CA758808 BR030025000_PLATE_F07_54_061.ab1 OA ... 50 0.001
gb|CB653197.1|CB653197 OSJNEc04A04.f OSJNEc Oryza sativa (j... 50 0.001
gb|CB656567.1|CB656567 OSJNEc11B07.f OSJNEc Oryza sativa (j... 50 0.001
gb|CF276098.1|CF276098 14ETL--01-B22.b1 Rice etiolated leaf... 50 0.001
gb|CF326047.1|CF326047 JMT1--04-P11.g1 AtJMT-overexpressing... 50 0.001
emb|AL607104.1|OSJN01012 Oryza sativa (japonica cultivar-gr... 50 0.001
gb|AF474138.1| Oryza sativa typical P-type R2R3 Myb protein... 50 0.001
dbj|AP003922.2| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AK063027.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK069082.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK099636.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK104345.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK104408.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK104457.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK111697.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK111788.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK111821.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK111966.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC O... 50 0.001
gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone... 50 0.001
gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone... 50 0.001
dbj|AP003912.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 ... 50 0.001
dbj|AP006174.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 50 0.001
ref|NT_107157.1| Oryza sativa (japonica cultivar-group) 50 0.001
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 50 0.001
gb|AC137621.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AACV01000388.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01002776.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01005439.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01007164.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01010857.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01012232.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01014797.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01016563.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01017741.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01020458.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01022477.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01024071.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|XM_467854.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_478689.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_480985.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_483665.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 50 0.001
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 50 0.001
gb|AC130600.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP004121.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 50 0.001
dbj|AP005495.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005195.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 50 0.001
emb|AJ495784.1|OSA495784 Oryza sativa (japonica cultivar-gr... 50 0.001
dbj|AP004669.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP003297.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
emb|Y11415.1|OSMYB1355 O.sativa mRNA for myb factor, 1355 bp 50 0.001
gb|AC135794.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|AC134044.4| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|AQ329740.1|AQ329740 nbxb0045L21r CUGI Rice BAC Library O... 48 0.005
gb|C73695.1|C73695 C73695 Rice panicle (longer than 10cm) O... 48 0.005
gb|C74144.1|C74144 C74144 Rice panicle shorter than 3cm Ory... 48 0.005
gb|AU081563.1|AU081563 AU081563 Rice panicle shorter than 3... 48 0.005
gb|AU082155.1|AU082155 AU082155 Rice root Oryza sativa (jap... 48 0.005
gb|CA753778.1|CA753778 BR040002000_PLATE_B03_18_027.ab1 OA ... 48 0.005
gb|CB645413.1|CB645413 OSJNEb07B01.f OSJNEb Oryza sativa (j... 48 0.005
gb|CB646439.1|CB646439 OSJNEb08O20.f OSJNEb Oryza sativa (j... 48 0.005
gb|CB647549.1|CB647549 OSJNEb10I09.r OSJNEb Oryza sativa (j... 48 0.005
gb|CB647551.1|CB647551 OSJNEb10I10.r OSJNEb Oryza sativa (j... 48 0.005
gb|CB649485.1|CB649485 OSJNEb13H02.f OSJNEb Oryza sativa (j... 48 0.005
gb|CB651228.1|CB651228 OSJNEb16B21.f OSJNEb Oryza sativa (j... 48 0.005
gb|CB651229.1|CB651229 OSJNEb16B21.r OSJNEb Oryza sativa (j... 48 0.005
gb|CB651480.1|CB651480 OSJNEb16H08.f OSJNEb Oryza sativa (j... 48 0.005
gb|CB651481.1|CB651481 OSJNEb16H08.r OSJNEb Oryza sativa (j... 48 0.005
gb|CB655152.1|CB655152 OSJNEc08E13.f OSJNEc Oryza sativa (j... 48 0.005
gb|CB655153.1|CB655153 OSJNEc08E13.r OSJNEc Oryza sativa (j... 48 0.005
gb|CB655500.1|CB655500 OSJNEc09A01.f OSJNEc Oryza sativa (j... 48 0.005
gb|CB663811.1|CB663811 OSJNEd09C20.r OSJNEd Oryza sativa (j... 48 0.005
gb|CB667792.1|CB667792 OSJNEd15E21.f OSJNEd Oryza sativa (j... 48 0.005
gb|CB669882.1|CB669882 OSJNEe02K23.r OSJNEe Oryza sativa (j... 48 0.005
gb|CB676187.1|CB676187 OSJNEe12E23.f OSJNEe Oryza sativa (j... 48 0.005
gb|CV152463.1|CV152463 LS331-S.SEQ Cold stressed rice cDNA ... 48 0.005
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 48 0.005
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 48 0.005
dbj|AK061823.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK066025.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK066180.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK072361.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK110844.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK111720.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK111933.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK112056.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 48 0.005
gb|AC136956.4| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP003849.2| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP005465.5| Oryza sativa (japonica cultivar-group) geno... 48 0.005
ref|NT_107095.1| Oryza sativa (japonica cultivar-group) chr... 48 0.005
dbj|AP005527.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP005619.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
gb|AACV01002127.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01003132.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01005216.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01013461.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01016207.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01018505.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01023384.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01025048.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
ref|NM_189493.1| Oryza sativa (japonica cultivar-group), p... 48 0.005
ref|NM_192085.1| Oryza sativa (japonica cultivar-group), p... 48 0.005
ref|XM_466825.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
ref|XM_467269.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
ref|XM_472292.1| Oryza sativa (japonica cultivar-group), p... 48 0.005
ref|XM_482497.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 48 0.005
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 48 0.005
ref|XM_506902.1| PREDICTED Oryza sativa (japonica cultivar-... 48 0.005
dbj|AP004786.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP005859.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP003347.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) geno... 48 0.005
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
gb|AY569615.1| Oryza sativa (japonica cultivar-group) MYB t... 48 0.005
emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromoso... 48 0.005
gb|CZ593970.1|CZ593970 UCDRGT1903_5.1 UCD RGT Rice Insertio... 46 0.019
gb|CB655501.1|CB655501 OSJNEc09A01.r OSJNEc Oryza sativa (j... 46 0.019
gb|CB670027.1|CB670027 OSJNEe02O10.r OSJNEe Oryza sativa (j... 46 0.019
gb|CB679300.1|CB679300 OSJNEf02K08.f OSJNEf Oryza sativa (j... 46 0.019
dbj|AK103455.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.019
dbj|AK107424.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.019
dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.019
gb|AC134230.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.019
gb|AC122149.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.019
gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbar... 46 0.019
gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbar... 46 0.019
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 46 0.019
dbj|AP002860.1| Oryza sativa (japonica cultivar-group) geno... 46 0.019
gb|AACV01000122.1| Oryza sativa (japonica cultivar-group) c... 46 0.019
gb|AACV01005857.1| Oryza sativa (japonica cultivar-group) c... 46 0.019
gb|AACV01006480.1| Oryza sativa (japonica cultivar-group) c... 46 0.019
gb|AACV01017050.1| Oryza sativa (japonica cultivar-group) c... 46 0.019
ref|NM_185512.2| Oryza sativa (japonica cultivar-group), mRNA 46 0.019
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 46 0.019
ref|NM_184207.2| Oryza sativa (japonica cultivar-group), mRNA 46 0.019
dbj|AP003816.2| Oryza sativa (japonica cultivar-group) geno... 46 0.019
gb|AQ160956.1|AQ160956 nbxb0006A18r CUGI Rice BAC Library O... 44 0.075
gb|CB645414.1|CB645414 OSJNEb07B01.r OSJNEb Oryza sativa (j... 44 0.075
dbj|AP004700.1| Oryza sativa (japonica cultivar-group) chro... 44 0.075
dbj|AP005757.2| Oryza sativa (japonica cultivar-group) geno... 44 0.075
gb|AACV01009913.1| Oryza sativa (japonica cultivar-group) c... 44 0.075
gb|AACV01018545.1| Oryza sativa (japonica cultivar-group) c... 44 0.075
ref|XM_482570.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.075
gb|AY873156.1|AY873156 04ET3_373_A_201_000_010G04 Oryza sat... 42 0.30
gb|CZ558584.1|CZ558584 M0039872 AS_TRIM_TDNA_B1 Oryza sativ... 42 0.30
gb|AU055831.1|AU055831 AU055831 Oryza sativa mature leaf Ni... 42 0.30
dbj|AK119340.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.30
gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbar... 42 0.30
gb|AC136491.4| Oryza sativa (japonica cultivar-group) chrom... 42 0.30
ref|NT_107094.1| Oryza sativa (japonica cultivar-group) chr... 42 0.30
gb|AC136150.4| Oryza sativa (japonica cultivar-group) chrom... 42 0.30
gb|AACV01000257.1| Oryza sativa (japonica cultivar-group) c... 42 0.30
gb|AACV01006413.1| Oryza sativa (japonica cultivar-group) c... 42 0.30
gb|AACV01023206.1| Oryza sativa (japonica cultivar-group) c... 42 0.30
ref|XM_462805.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.30
emb|AJ237661.1|OSA237661 Oryza sativa mRNA for Myb factor p... 42 0.30
>ref|XM_466990.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 954
Score = 454 bits (229), Expect = e-125
Identities = 316/345 (91%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||| ||||||| ||||||| ||| |||||||| |||||||||||||| |||
Sbjct: 1 atggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggcctgtggtcaccg 60
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 61 gaggaggaccagaagctccgcgactacattctccgccatggccacggctgctggagcgcg 120
Query: 219 ctccccgcgaaagccgggctccagcggaacggcaagagctgcaggctgcggtggatcaac 278
||||| ||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct: 121 ctccctgcgaatgccgggctccagaggaacgggaagagctgccggctgcggtggatcaac 180
Query: 279 taccttcggccggggctgaagcacggcatgttctccccggaggaggaggagacggtgatg 338
||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 181 tacctgcggccggggctgaagcacggcgtgttctcgccggaggaggaggagacggtgatg 240
Query: 339 agcctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcagg 398
|||||||||||| ||||||||||||||||||| ||||| |||||||| | ||||| ||
Sbjct: 241 agcctccacgccgcgctcggcaacaagtggtctaggatagcacggcatctacctgggaga 300
Query: 399 accgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|| ||||||||||| |||||||||||||| || ||||| ||||||
Sbjct: 301 acagacaacgaggtgaagaactactggaattcttacctgaagaag 345
>gb|AU062424.2|AU062424 AU062424 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10866, mRNA sequence
Length = 406
Score = 331 bits (167), Expect = 2e-088
Identities = 273/302 (90%), Gaps = 5/302 (1%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 104 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 163
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 164 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 223
Query: 207 tgctggagcgcgctccccgcgaaagccgggctccagcggaacggcaagagctgcaggctg 266
||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||| |||||
Sbjct: 224 tgctggagcgcgctccctgcgaatgccgggctccagaggaacgggaagagctgccggctg 283
Query: 267 cggtggatcaac-taccttcggccggggc-tgaagcacggcatgttc-tccccggaggag 323
|||||||||||| ||||| |||||||||| ||||||||||| ||||| || |||||||||
Sbjct: 284 cggtggatcaacttacctgcggccggggcttgaagcacggcgtgttcttcgccggaggag 343
Query: 324 gaggagacggtgatgagcctccacgccacgctcggcaacaagtggtccaggatcgcacgg 383
||||||||||||||||| || |||| | || | |||||||||| ||| ||||| ||||||
Sbjct: 344 gaggagacggtgatgag-cttcacggcgcg-ttggcaacaagtngtctaggatagcacgg 401
Query: 384 ca 385
||
Sbjct: 402 ca 403
>dbj|AK107135.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C09, full
insert sequence
Length = 1309
Score = 311 bits (157), Expect = 2e-082
Identities = 298/345 (86%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 189 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 248
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 249 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 308
Query: 219 ctccccgcgaaagccgggctccagcggaacggcaagagctgcaggctgcggtggatcaac 278
|||||| ||| |||||||| ||||| ||||||||||| ||||||||| | ||||||||
Sbjct: 309 gtccccgtgaaggccgggctgcagcgtaacggcaagagttgcaggctgagatggatcaat 368
Query: 279 taccttcggccggggctgaagcacggcatgttctccccggaggaggaggagacggtgatg 338
||||| ||||||||||||||||||||||||| |||| ||||| || || || || |||
Sbjct: 369 tacctgaggccggggctgaagcacggcatgttttcccgagaggaagaagaaaccgtcatg 428
Query: 339 agcctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcagg 398
| ||| ||||| || | |||||||||||||| ||| || ||||| |||||||| ||
Sbjct: 429 aacctgcacgctacaatgggcaacaagtggtcacagatagcgcggcatctgcctggccgg 488
Query: 399 accgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 489 acggacaacgaggtgaagaactactggaactcgtacctcaagaag 533
>ref|XM_473291.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 822
Score = 311 bits (157), Expect = 2e-082
Identities = 298/345 (86%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 1 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 60
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 61 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 120
Query: 219 ctccccgcgaaagccgggctccagcggaacggcaagagctgcaggctgcggtggatcaac 278
|||||| ||| |||||||| ||||| ||||||||||| ||||||||| | ||||||||
Sbjct: 121 gtccccgtgaaggccgggctgcagcgtaacggcaagagttgcaggctgagatggatcaat 180
Query: 279 taccttcggccggggctgaagcacggcatgttctccccggaggaggaggagacggtgatg 338
||||| ||||||||||||||||||||||||| |||| ||||| || || || || |||
Sbjct: 181 tacctgaggccggggctgaagcacggcatgttttcccgagaggaagaagaaaccgtcatg 240
Query: 339 agcctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcagg 398
| ||| ||||| || | |||||||||||||| ||| || ||||| |||||||| ||
Sbjct: 241 aacctgcacgctacaatgggcaacaagtggtcacagatagcgcggcatctgcctggccgg 300
Query: 399 accgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 acggacaacgaggtgaagaactactggaactcgtacctcaagaag 345
>gb|AU062529.1|AU062529 AU062529 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11783_1A, mRNA sequence
Length = 377
Score = 307 bits (155), Expect = 3e-081
Identities = 246/271 (90%), Gaps = 4/271 (1%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 104 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 163
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| |||||| |||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 164 ctgtggtcaccggag-aggaccagaagctccgcgactacattctccgccatggccacggc 222
Query: 207 tgctggagcgcgctccccgcgaaagccgggctccagcggaacggcaagagctgcaggctg 266
||||||||||||||||| ||| || ||||||||||| ||||||| ||||||||| |||||
Sbjct: 223 tgctggagcgcgctccctgcg-aatccgggctccagaggaacgggaagagctgccggctg 281
Query: 267 cggtggatcaactaccttcggccggggctgaagcacggc-atgttctccccggagga-gg 324
||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||| || ||
Sbjct: 282 cggtggatcaactacctgcggccggggcttaagcacggcgttgttctcgccggaagaggg 341
Query: 325 aggagacggtgatgagcctccacgccacgct 355
||||||||||||||||||| |||||| ||||
Sbjct: 342 aggagacggtgatgagccttcacgccgcgct 372
>gb|AU063524.1|AU063524 AU063524 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62517_1A, mRNA sequence
Length = 301
Score = 260 bits (131), Expect = 7e-067
Identities = 180/197 (91%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 104 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 163
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 164 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 223
Query: 207 tgctggagcgcgctccccgcgaaagccgggctccagcggaacggcaagagctgcaggctg 266
||||||||||||||||| ||||| |||||||||||| |||||| |||||||| || ||
Sbjct: 224 tgctggagcgcgctccctgcgaatgccgggctccagaggaacgngaagagctgacggntg 283
Query: 267 cggtggatcaactacct 283
|||||||||||||||||
Sbjct: 284 cggtggatcaactacct 300
>gb|AZ131108.1|AZ131108 OSJNBb0104L14f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0104L14f, DNA
sequence
Length = 413
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Minus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 344 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 285
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 284 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 225
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 224 tgctggagcgcgctccctgcgaatgccgg 196
>dbj|AP004788.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0408D11, ***
SEQUENCING IN PROGRESS ***
Length = 138934
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Minus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 58937 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 58878
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 58877 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 58818
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 58817 tgctggagcgcgctccctgcgaatgccgg 58789
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 58447 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 58388
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 58387 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 58328
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 58327 ctcggcaacaagt 58315
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 56927 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 56868
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 56867 gaattcttacctgaagaag 56849
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 40007 cggcaagagctgccggctgcggtggacgaactacctccggccgg 39964
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||
Sbjct: 39090 tgcccggccggaccgacaacgagatcaagaactattggaacactcacctcaagaag 39035
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_G03
Length = 106401
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 25545 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 25604
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 25605 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 25664
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 25665 ctcggcaacaagt 25677
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 25055 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 25114
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 25115 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 25174
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 25175 tgctggagcgcgctccctgcgaatgccgg 25203
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 27065 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 27124
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 27125 gaattcttacctgaagaag 27143
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||
Sbjct: 44902 tgcccggccggaccgacaacgagatcaagaactattggaacactcacctcaagaag 44957
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 43985 cggcaagagctgccggctgcggtggacgaactacctccggccgg 44028
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0010C01
Length = 186185
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 181615 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 181674
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 181675 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 181734
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 181735 ctcggcaacaagt 181747
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 181125 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 181184
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 181185 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 181244
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 181245 tgctggagcgcgctccctgcgaatgccgg 181273
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 183135 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 183194
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 183195 gaattcttacctgaagaag 183213
>gb|AACV01005009.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005009, whole
genome shotgun sequence
Length = 78753
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Minus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 57564 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 57505
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 57504 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 57445
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 57444 tgctggagcgcgctccctgcgaatgccgg 57416
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 57074 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 57015
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 57014 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 56955
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 56954 ctcggcaacaagt 56942
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 55554 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 55495
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 55494 gaattcttacctgaagaag 55476
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 38633 cggcaagagctgccggctgcggtggacgaactacctccggccgg 38590
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||
Sbjct: 37716 tgcccggccggaccgacaacgagatcaagaactattggaacactcacctcaagaag 37661
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 943938 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 943997
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 943998 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 944057
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 944058 ctcggcaacaagt 944070
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 943448 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 943507
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 943508 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 943567
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 943568 tgctggagcgcgctccctgcgaatgccgg 943596
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 945458 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 945517
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 945518 gaattcttacctgaagaag 945536
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||
Sbjct: 963295 tgcccggccggaccgacaacgagatcaagaactattggaacactcacctcaagaag 963350
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 962378 cggcaagagctgccggctgcggtggacgaactacctccggccgg 962421
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 6909151 aggactgacaacgagatcaagaactactggaac 6909119
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 3743193 cggcaagagctgccgcctccggtggatcaactacct 3743158
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 63156 cggcaagagctgccgcctccggtggatcaactacct 63121
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 12139312 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 12139371
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 12139372 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 12139431
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 12139432 ctcggcaacaagt 12139444
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 12138822 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 12138881
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 12138882 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 12138941
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 12138942 tgctggagcgcgctccctgcgaatgccgg 12138970
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 12140832 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 12140891
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 12140892 gaattcttacctgaagaag 12140910
Score = 61.9 bits (31), Expect = 3e-007
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactgga 426
||||||||||||| ||||||||| |||||||||||||||
Sbjct: 10926555 tgcctggcaggacggacaacgagatcaagaactactgga 10926517
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||
Sbjct: 12158670 tgcccggccggaccgacaacgagatcaagaactattggaacactcacctcaagaag 12158725
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 12157753 cggcaagagctgccggctgcggtggacgaactacctccggccgg 12157796
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 8630636 cggcaagagctgccggctccggtggacgaactaccttcggccgg 8630679
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 18307768 aggactgacaacgagatcaagaactactggaac 18307736
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 15007762 cggcaagagctgccgcctccggtggatcaactacct 15007727
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 11224522 cggcaagagctgccgcctccggtggatcaactacct 11224487
Score = 48.1 bits (24), Expect = 0.005
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 149 gtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggctg 208
|||| |||||||||||||||||||||| | || |||||| | ||||||||||||||
Sbjct: 8630413 gtggacgccggaggaggaccagaagctgctcgcctacatcgagcagcacggccacggctg 8630472
Query: 209 ctgg 212
||||
Sbjct: 8630473 ctgg 8630476
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 25592376 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 25592435
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 25592436 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 25592495
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 25592496 ctcggcaacaagt 25592508
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 25591886 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 25591945
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 25591946 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 25592005
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 25592006 tgctggagcgcgctccctgcgaatgccgg 25592034
Score = 81.8 bits (41), Expect = 3e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagaggg 447
||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 802830 tgcctgggaggacggacaacgaggtgaagaactactggaattcctacctcaagaagaggg 802771
Query: 448 t 448
|
Sbjct: 802770 t 802770
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 803185 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 803126
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 803125 ttctctcaggaggaggagga 803106
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 25593896 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 25593955
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 25593956 gaattcttacctgaagaag 25593974
Score = 61.9 bits (31), Expect = 3e-007
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactgga 426
||||||||||||| ||||||||| |||||||||||||||
Sbjct: 24379619 tgcctggcaggacggacaacgagatcaagaactactgga 24379581
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||
Sbjct: 25611734 tgcccggccggaccgacaacgagatcaagaactattggaacactcacctcaagaag 25611789
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 25610817 cggcaagagctgccggctgcggtggacgaactacctccggccgg 25610860
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 22083700 cggcaagagctgccggctccggtggacgaactaccttcggccgg 22083743
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 31760832 aggactgacaacgagatcaagaactactggaac 31760800
Score = 50.1 bits (25), Expect = 0.001
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 96 gcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcg 155
|||||||||||| | | ||||||||||| ||| |||||| | ||||| ||||||||
Sbjct: 803713 gcaatggggtgccggtcctgcgacaagccgaagatgaactacaggaaggggctgtggtct 803654
Query: 156 ccggaggaggaccagaagctccgcgactacatt 188
|| ||||||||||||| ||| | |||||||||
Sbjct: 803653 cctgaggaggaccagaggctgagggactacatt 803621
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 28460826 cggcaagagctgccgcctccggtggatcaactacct 28460791
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 24677586 cggcaagagctgccgcctccggtggatcaactacct 24677551
Score = 48.1 bits (24), Expect = 0.005
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 149 gtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggctg 208
|||| |||||||||||||||||||||| | || |||||| | ||||||||||||||
Sbjct: 22083477 gtggacgccggaggaggaccagaagctgctcgcctacatcgagcagcacggccacggctg 22083536
Query: 209 ctgg 212
||||
Sbjct: 22083537 ctgg 22083540
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 208 bits (105), Expect = 2e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 25778939 gggctccagaggaacgggaagagctgccggctgcggtggatcaactacctgcggccgggg 25778998
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 25778999 ctgaagcacggcgtgttctcgccggaggaggaggagacggtgatgagcctccacgccgcg 25779058
Query: 354 ctcggcaacaagt 366
|||||||||||||
Sbjct: 25779059 ctcggcaacaagt 25779071
Score = 208 bits (105), Expect = 2e-051
Identities = 138/149 (92%)
Strand = Plus / Plus
Query: 87 cattctccggcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggc 146
|||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||
Sbjct: 25778449 cattctcctgcaatggggtgcaagtcgtgcgagaagcccaggccgaactaccggaagggc 25778508
Query: 147 ctgtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggc 206
|||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 25778509 ctgtggtcaccggaggaggaccagaagctccgcgactacattctccgccatggccacggc 25778568
Query: 207 tgctggagcgcgctccccgcgaaagccgg 235
||||||||||||||||| ||||| |||||
Sbjct: 25778569 tgctggagcgcgctccctgcgaatgccgg 25778597
Score = 81.8 bits (41), Expect = 3e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagaggg 447
||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 790201 tgcctgggaggacggacaacgaggtgaagaactactggaattcctacctcaagaagaggg 790142
Query: 448 t 448
|
Sbjct: 790141 t 790141
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 790556 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 790497
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 790496 ttctctcaggaggaggagga 790477
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 365 gtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactg 424
|||||| ||||| |||||||| | ||||| || || ||||||||||| |||||||||||
Sbjct: 25780459 gtggtctaggatagcacggcatctacctgggagaacagacaacgaggtgaagaactactg 25780518
Query: 425 gaactcgtacctcaagaag 443
||| || ||||| ||||||
Sbjct: 25780519 gaattcttacctgaagaag 25780537
Score = 61.9 bits (31), Expect = 3e-007
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactgga 426
||||||||||||| ||||||||| |||||||||||||||
Sbjct: 24600816 tgcctggcaggacggacaacgagatcaagaactactgga 24600778
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
|||| ||||||||| ||||||||||||||||| || |||| |||||||||
Sbjct: 22288637 ggacggacaacgagatcaagaactactggaacacgcacctgaagaagagg 22288686
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||
Sbjct: 25798296 tgcccggccggaccgacaacgagatcaagaactattggaacactcacctcaagaag 25798351
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 25797379 cggcaagagctgccggctgcggtggacgaactacctccggccgg 25797422
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 22287586 cggcaagagctgccggctccggtggacgaactaccttcggccgg 22287629
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 31744152 aggactgacaacgagatcaagaactactggaac 31744120
Score = 50.1 bits (25), Expect = 0.001
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 96 gcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcg 155
|||||||||||| | | ||||||||||| ||| |||||| | ||||| ||||||||
Sbjct: 791084 gcaatggggtgccggtcctgcgacaagccgaagatgaactacaggaaggggctgtggtct 791025
Query: 156 ccggaggaggaccagaagctccgcgactacatt 188
|| ||||||||||||| ||| | |||||||||
Sbjct: 791024 cctgaggaggaccagaggctgagggactacatt 790992
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 28578194 cggcaagagctgccgcctccggtggatcaactacct 28578159
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||| | || |||||||||||||||||
Sbjct: 24898157 cggcaagagctgccgcctccggtggatcaactacct 24898122
Score = 48.1 bits (24), Expect = 0.005
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 149 gtggtcgccggaggaggaccagaagctccgcgactacattctcctccacggccacggctg 208
|||| |||||||||||||||||||||| | || |||||| | ||||||||||||||
Sbjct: 22287363 gtggacgccggaggaggaccagaagctgctcgcctacatcgagcagcacggccacggctg 22287422
Query: 209 ctgg 212
||||
Sbjct: 22287423 ctgg 22287426
>dbj|AK109796.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E07, full
insert sequence
Length = 1726
Score = 153 bits (77), Expect = 1e-034
Identities = 122/137 (89%)
Strand = Plus / Minus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 1235 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 1176
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 1175 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 1116
Query: 219 ctccccgcgaaagccgg 235
|||||| ||| |||||
Sbjct: 1115 gtccccgtgaaggccgg 1099
Score = 91.7 bits (46), Expect = 4e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| ||||||||
Sbjct: 768 gggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccgggg 709
Query: 294 ctgaagcacggcatgttctccc 315
||||||||||||||||| ||||
Sbjct: 708 ctgaagcacggcatgttttccc 687
>gb|AACV01010177.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010177, whole
genome shotgun sequence
Length = 8521
Score = 153 bits (77), Expect = 1e-034
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 3984 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 4043
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 4044 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 4103
Query: 219 ctccccgcgaaagccgg 235
|||||| ||| |||||
Sbjct: 4104 gtccccgtgaaggccgg 4120
Score = 91.7 bits (46), Expect = 4e-016
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| ||||||||
Sbjct: 4451 gggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccgggg 4510
Query: 294 ctgaagcacggcatgttctccc 315
||||||||||||||||| ||||
Sbjct: 4511 ctgaagcacggcatgttttccc 4532
Score = 87.7 bits (44), Expect = 6e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5507 tgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaag 5562
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 153 bits (77), Expect = 1e-034
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 388327 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 388386
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 388387 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 388446
Query: 219 ctccccgcgaaagccgg 235
|||||| ||| |||||
Sbjct: 388447 gtccccgtgaaggccgg 388463
Score = 91.7 bits (46), Expect = 4e-016
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| ||||||||
Sbjct: 388794 gggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccgggg 388853
Query: 294 ctgaagcacggcatgttctccc 315
||||||||||||||||| ||||
Sbjct: 388854 ctgaagcacggcatgttttccc 388875
Score = 87.7 bits (44), Expect = 6e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 389850 tgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaag 389905
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 410308 cggcaagagctgccggctgcggtggacgaactacctgcggccgg 410351
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 153 bits (77), Expect = 1e-034
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 4442645 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 4442704
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 4442705 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 4442764
Query: 219 ctccccgcgaaagccgg 235
|||||| ||| |||||
Sbjct: 4442765 gtccccgtgaaggccgg 4442781
Score = 91.7 bits (46), Expect = 4e-016
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| ||||||||
Sbjct: 4443112 gggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccgggg 4443171
Query: 294 ctgaagcacggcatgttctccc 315
||||||||||||||||| ||||
Sbjct: 4443172 ctgaagcacggcatgttttccc 4443193
Score = 87.7 bits (44), Expect = 6e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4444168 tgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaag 4444223
Score = 63.9 bits (32), Expect = 8e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 3690614 cggcaagagctgccggctccggtggatcaactacctgcggccgg 3690571
Score = 58.0 bits (29), Expect = 5e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
||||| ||||||||| ||||||||||||||||| || || |||||||||
Sbjct: 7757120 aggacggacaacgagatcaagaactactggaacacgcacatcaagaaga 7757072
Score = 56.0 bits (28), Expect = 2e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatgttc 311
||||||||| | || ||||||||||||||||| ||||||| || |||| ||||| |||
Sbjct: 7791048 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 7790989
Query: 312 tccccggaggaggaggagac 331
|| | ||||||||||||||
Sbjct: 7790988 accgccgaggaggaggagac 7790969
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 4465755 cggcaagagctgccggctgcggtggacgaactacctgcggccgg 4465798
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 393 ggcaggaccgacaacgaggtcaagaactactgga 426
|||||||| ||||||||| |||||||||||||||
Sbjct: 3260994 ggcaggacggacaacgagatcaagaactactgga 3260961
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggcc 289
||||||||| |||||||||||| ||||||||| |||||
Sbjct: 1383107 aagagctgccggctgcggtggaccaactacctccggcc 1383070
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagggt 448
||||| ||||||||| |||||||| ||||||| || ||||||||||| ||||
Sbjct: 7790800 aggacggacaacgagatcaagaacgtctggaacacgcacctcaagaagcgggt 7790748
Score = 44.1 bits (22), Expect = 0.075
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||| |||||| ||||||||||||| | || ||||||| |||||||| |||||||
Sbjct: 874459 gggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggccgg 874516
Score = 44.1 bits (22), Expect = 0.075
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 cgccggaggaggaccagaagct 175
||||||||||||||||||||||
Sbjct: 874235 cgccggaggaggaccagaagct 874256
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 153 bits (77), Expect = 1e-034
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 23586744 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 23586803
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 23586804 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 23586863
Query: 219 ctccccgcgaaagccgg 235
|||||| ||| |||||
Sbjct: 23586864 gtccccgtgaaggccgg 23586880
Score = 91.7 bits (46), Expect = 4e-016
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| ||||||||
Sbjct: 23587211 gggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccgggg 23587270
Query: 294 ctgaagcacggcatgttctccc 315
||||||||||||||||| ||||
Sbjct: 23587271 ctgaagcacggcatgttttccc 23587292
Score = 87.7 bits (44), Expect = 6e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 23588267 tgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaag 23588322
Score = 63.9 bits (32), Expect = 8e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 22834713 cggcaagagctgccggctccggtggatcaactacctgcggccgg 22834670
Score = 58.0 bits (29), Expect = 5e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
||||| ||||||||| ||||||||||||||||| || || |||||||||
Sbjct: 26901219 aggacggacaacgagatcaagaactactggaacacgcacatcaagaaga 26901171
Score = 56.0 bits (28), Expect = 2e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatgttc 311
||||||||| | || ||||||||||||||||| ||||||| || |||| ||||| |||
Sbjct: 26935147 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 26935088
Query: 312 tccccggaggaggaggagac 331
|| | ||||||||||||||
Sbjct: 26935087 accgccgaggaggaggagac 26935068
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 23609854 cggcaagagctgccggctgcggtggacgaactacctgcggccgg 23609897
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 393 ggcaggaccgacaacgaggtcaagaactactgga 426
|||||||| ||||||||| |||||||||||||||
Sbjct: 22405093 ggcaggacggacaacgagatcaagaactactgga 22405060
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggcc 289
||||||||| |||||||||||| ||||||||| |||||
Sbjct: 20527206 aagagctgccggctgcggtggaccaactacctccggcc 20527169
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagggt 448
||||| ||||||||| |||||||| ||||||| || ||||||||||| ||||
Sbjct: 26934899 aggacggacaacgagatcaagaacgtctggaacacgcacctcaagaagcgggt 26934847
Score = 44.1 bits (22), Expect = 0.075
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||| |||||| ||||||||||||| | || ||||||| |||||||| |||||||
Sbjct: 20018558 gggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggccgg 20018615
Score = 44.1 bits (22), Expect = 0.075
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 cgccggaggaggaccagaagct 175
||||||||||||||||||||||
Sbjct: 20018334 cgccggaggaggaccagaagct 20018355
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24,
complete sequence
Length = 121056
Score = 153 bits (77), Expect = 1e-034
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 51301 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 51360
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 51361 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 51420
Query: 219 ctccccgcgaaagccgg 235
|||||| ||| |||||
Sbjct: 51421 gtccccgtgaaggccgg 51437
Score = 91.7 bits (46), Expect = 4e-016
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| ||||||||
Sbjct: 51768 gggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccgggg 51827
Query: 294 ctgaagcacggcatgttctccc 315
||||||||||||||||| ||||
Sbjct: 51828 ctgaagcacggcatgttttccc 51849
Score = 87.7 bits (44), Expect = 6e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 52824 tgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaag 52879
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 73282 cggcaagagctgccggctgcggtggacgaactacctgcggccgg 73325
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 153 bits (77), Expect = 1e-034
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 99 atggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccg 158
|||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||
Sbjct: 26611743 atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccg 26611802
Query: 159 gaggaggaccagaagctccgcgactacattctcctccacggccacggctgctggagcgcg 218
||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||
Sbjct: 26611803 gaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgcc 26611862
Query: 219 ctccccgcgaaagccgg 235
|||||| ||| |||||
Sbjct: 26611863 gtccccgtgaaggccgg 26611879
Score = 91.7 bits (46), Expect = 4e-016
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| ||||||||
Sbjct: 26612210 gggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccgggg 26612269
Query: 294 ctgaagcacggcatgttctccc 315
||||||||||||||||| ||||
Sbjct: 26612270 ctgaagcacggcatgttttccc 26612291
Score = 87.7 bits (44), Expect = 6e-015
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaag 443
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 26613266 tgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaag 26613321
Score = 63.9 bits (32), Expect = 8e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 25817981 cggcaagagctgccggctccggtggatcaactacctgcggccgg 25817938
Score = 58.0 bits (29), Expect = 5e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
||||| ||||||||| ||||||||||||||||| || || |||||||||
Sbjct: 29969881 aggacggacaacgagatcaagaactactggaacacgcacatcaagaaga 29969833
Score = 56.0 bits (28), Expect = 2e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatgttc 311
||||||||| | || ||||||||||||||||| ||||||| || |||| ||||| |||
Sbjct: 30003496 aagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttc 30003437
Query: 312 tccccggaggaggaggagac 331
|| | ||||||||||||||
Sbjct: 30003436 accgccgaggaggaggagac 30003417
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 26633724 cggcaagagctgccggctgcggtggacgaactacctgcggccgg 26633767
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 393 ggcaggaccgacaacgaggtcaagaactactgga 426
|||||||| ||||||||| |||||||||||||||
Sbjct: 25379381 ggcaggacggacaacgagatcaagaactactgga 25379348
Score = 52.0 bits (26), Expect = 3e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggcc 289
||||||||| |||||||||||| ||||||||| |||||
Sbjct: 23487045 aagagctgccggctgcggtggaccaactacctccggcc 23487008
Score = 52.0 bits (26), Expect = 3e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactcgtacctcaagaag 443
||||||||| ||||||||||||||||| || |||| ||||||
Sbjct: 23000294 gacaacgagatcaagaactactggaacacgcacctaaagaag 23000335
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagggt 448
||||| ||||||||| |||||||| ||||||| || ||||||||||| ||||
Sbjct: 30003248 aggacggacaacgagatcaagaacgtctggaacacgcacctcaagaagcgggt 30003196
Score = 48.1 bits (24), Expect = 0.005
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 250 gcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||||| |||| ||||||| |||||||| |||||||||
Sbjct: 19170002 gcaagagctgccggctccggtggacgaactacctccggccgggg 19170045
Score = 44.1 bits (22), Expect = 0.075
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||| |||||| ||||||||||||| | || ||||||| |||||||| |||||||
Sbjct: 22999217 gggctgcagcggtgcggcaagagctgccgactccggtggacgaactacctccggccgg 22999274
Score = 44.1 bits (22), Expect = 0.075
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 cgccggaggaggaccagaagct 175
||||||||||||||||||||||
Sbjct: 22998993 cgccggaggaggaccagaagct 22999014
>ref|XM_463865.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 894
Score = 125 bits (63), Expect = 3e-026
Identities = 267/335 (79%)
Strand = Plus / Plus
Query: 114 tgcgacaagcccaagcccaactaccgcaagggcctgtggtcgccggaggaggaccagaag 173
||||||||||| ||| |||||| | ||||| |||||||| || ||||||||||||| |
Sbjct: 16 tgcgacaagccgaagatgaactacaggaaggggctgtggtctcctgaggaggaccagagg 75
Query: 174 ctccgcgactacattctcctccacggccacggctgctggagcgcgctccccgcgaaagcc 233
|| | ||||||||| || || |||| ||||||||||| || |||| || || ||
Sbjct: 76 ctgagggactacattgtcaagcatggccttggctgctggagtgctgtccctgcaaaggct 135
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactaccttcggccgggg 293
|| | ||| | || |||||||||||| ||||||| |||||||||||||||||||| ||
Sbjct: 136 ggtttgcagagaaatggcaagagctgccggctgcgttggatcaactaccttcggccagga 195
Query: 294 ctgaagcacggcatgttctccccggaggaggaggagacggtgatgagcctccacgccacg 353
|||||| || |||||||| | |||||||||||| | || || | || || |||| |
Sbjct: 196 ttgaagcgtggaatgttctctcaggaggaggaggacattgtcatcaatcttcaggccaag 255
Query: 354 ctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtc 413
|| |||||||||||||| ||| || ||| ||||||| ||||| |||||||||||
Sbjct: 256 ctgggcaacaagtggtcacagattgcgatgcatctgcctgggaggacggacaacgaggtg 315
Query: 414 aagaactactggaactcgtacctcaagaagagggt 448
|||||||||||||| || |||||||||||||||||
Sbjct: 316 aagaactactggaattcctacctcaagaagagggt 350
>ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1074
Score = 85.7 bits (43), Expect = 2e-014
Identities = 157/195 (80%)
Strand = Plus / Plus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
||||||||||||||||||||||||| |||||||| |||||| | ||| |||| |
Sbjct: 148 ggcaagagctgcaggctgcggtggacgaactacctgaggccggacatcaagaggggcaag 207
Query: 309 ttctccccggaggaggaggagacggtgatgagcctccacgccacgctcggcaacaagtgg 368
||||||| |||||||||| |||| | | ||||||| ||| |||||||||||||||
Sbjct: 208 ttctcccaggaggaggagcagaccatcctccacctccactccatcctcggcaacaagtgg 267
Query: 369 tccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactggaac 428
|| |||||| |||| |||| || ||||| ||||||||| ||||||||| |||||||
Sbjct: 268 tcggcgatcgcgacgcacctgccggggaggacggacaacgagatcaagaacttctggaac 327
Query: 429 tcgtacctcaagaag 443
|| |||||||||||
Sbjct: 328 acgcacctcaagaag 342
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1399_H05
Length = 147670
Score = 81.8 bits (41), Expect = 3e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagaggg 447
||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 147096 tgcctgggaggacggacaacgaggtgaagaactactggaattcctacctcaagaagaggg 147037
Query: 448 t 448
|
Sbjct: 147036 t 147036
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 147451 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 147392
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 147391 ttctctcaggaggaggagga 147372
>gb|AACV01003205.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003205, whole
genome shotgun sequence
Length = 8907
Score = 81.8 bits (41), Expect = 3e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagaggg 447
||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 3608 tgcctgggaggacggacaacgaggtgaagaactactggaattcctacctcaagaagaggg 3549
Query: 448 t 448
|
Sbjct: 3548 t 3548
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 3963 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 3904
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 3903 ttctctcaggaggaggagga 3884
Score = 50.1 bits (25), Expect = 0.001
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 96 gcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcg 155
|||||||||||| | | ||||||||||| ||| |||||| | ||||| ||||||||
Sbjct: 4491 gcaatggggtgccggtcctgcgacaagccgaagatgaactacaggaaggggctgtggtct 4432
Query: 156 ccggaggaggaccagaagctccgcgactacatt 188
|| ||||||||||||| ||| | |||||||||
Sbjct: 4431 cctgaggaggaccagaggctgagggactacatt 4399
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0036E06
Length = 137926
Score = 81.8 bits (41), Expect = 3e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagaggg 447
||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 68332 tgcctgggaggacggacaacgaggtgaagaactactggaattcctacctcaagaagaggg 68273
Query: 448 t 448
|
Sbjct: 68272 t 68272
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 68687 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 68628
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 68627 ttctctcaggaggaggagga 68608
Score = 50.1 bits (25), Expect = 0.001
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 96 gcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcg 155
|||||||||||| | | ||||||||||| ||| |||||| | ||||| ||||||||
Sbjct: 69215 gcaatggggtgccggtcctgcgacaagccgaagatgaactacaggaaggggctgtggtct 69156
Query: 156 ccggaggaggaccagaagctccgcgactacatt 188
|| ||||||||||||| ||| | |||||||||
Sbjct: 69155 cctgaggaggaccagaggctgagggactacatt 69123
>ref|NT_107175.1| Oryza sativa (japonica cultivar-group)
Length = 2882457
Score = 81.8 bits (41), Expect = 3e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagaggg 447
||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 790201 tgcctgggaggacggacaacgaggtgaagaactactggaattcctacctcaagaagaggg 790142
Query: 448 t 448
|
Sbjct: 790141 t 790141
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 790556 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 790497
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 790496 ttctctcaggaggaggagga 790477
Score = 50.1 bits (25), Expect = 0.001
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 96 gcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcg 155
|||||||||||| | | ||||||||||| ||| |||||| | ||||| ||||||||
Sbjct: 791084 gcaatggggtgccggtcctgcgacaagccgaagatgaactacaggaaggggctgtggtct 791025
Query: 156 ccggaggaggaccagaagctccgcgactacatt 188
|| ||||||||||||| ||| | |||||||||
Sbjct: 791024 cctgaggaggaccagaggctgagggactacatt 790992
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006
genomic scaffold, whole genome shotgun sequence
Length = 13452964
Score = 81.8 bits (41), Expect = 3e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagaggg 447
||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 802830 tgcctgggaggacggacaacgaggtgaagaactactggaattcctacctcaagaagaggg 802771
Query: 448 t 448
|
Sbjct: 802770 t 802770
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 803185 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 803126
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 803125 ttctctcaggaggaggagga 803106
Score = 50.1 bits (25), Expect = 0.001
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 96 gcaatggggtgcaaggcgtgcgacaagcccaagcccaactaccgcaagggcctgtggtcg 155
|||||||||||| | | ||||||||||| ||| |||||| | ||||| ||||||||
Sbjct: 803713 gcaatggggtgccggtcctgcgacaagccgaagatgaactacaggaaggggctgtggtct 803654
Query: 156 ccggaggaggaccagaagctccgcgactacatt 188
|| ||||||||||||| ||| | |||||||||
Sbjct: 803653 cctgaggaggaccagaggctgagggactacatt 803621
>gb|AQ325721.1|AQ325721 nbxb0020A23f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0020A23f, DNA sequence
Length = 698
Score = 79.8 bits (40), Expect = 1e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 249 ggcaagagctgcaggctgcggtggatcaactaccttcggccggggctgaagcacggcatg 308
|||||||||||| ||||||| |||||||||||||||||||| || |||||| || |||
Sbjct: 224 ggcaagagctgccggctgcgttggatcaactaccttcggccaggattgaagcgtggaatg 283
Query: 309 ttctccccggaggaggagga 328
||||| | ||||||||||||
Sbjct: 284 ttctctcaggaggaggagga 303
>dbj|AK064679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H05, full
insert sequence
Length = 1389
Score = 79.8 bits (40), Expect = 1e-012
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 353 gctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggt 412
||||||||||| |||||||| |||||| |||| |||| |||||||| ||||||||| |
Sbjct: 401 gctcggcaacaggtggtccaagatcgcgtcgcacctgccgggcaggacggacaacgagat 460
Query: 413 caagaactactggaactcgtacctcaagaaga 444
||||||| |||||||| || || |||||||||
Sbjct: 461 caagaaccactggaacacgcacatcaagaaga 492
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete
sequence
Length = 135594
Score = 79.8 bits (40), Expect = 1e-012
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 104227 ggaccgacaacgaggtcaagaacttctggaactcgtacatcaagaaga 104274
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 147 ctgtggtcgccggaggaggaccagaagctc 176
||||||||||||||||||||| ||||||||
Sbjct: 103670 ctgtggtcgccggaggaggacgagaagctc 103699
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||| || ||||||| ||||||||
Sbjct: 103979 cggcaagagctgcaggttgaggtggataaactacct 104014
>ref|NM_189302.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 954
Score = 79.8 bits (40), Expect = 1e-012
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 341 cctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggac 400
|||||||||||| |||||||||| ||||||| |||||| | |||||||| || ||||
Sbjct: 240 cctccacgccacactcggcaacaggtggtccctgatcgccggccacttgcccgggcggac 299
Query: 401 cgacaacgaggtcaagaactactggaactcgtacct 436
||||| ||| |||||||||||||||||||| ||||
Sbjct: 300 ggacaatgagatcaagaactactggaactcgcacct 335
Score = 63.9 bits (32), Expect = 8e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| |||||||||||||||||
Sbjct: 147 cggcaagagctgcaggcttcggtggatcaactacct 182
>ref|XM_470673.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1098
Score = 79.8 bits (40), Expect = 1e-012
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 296 ggaccgacaacgaggtcaagaacttctggaactcgtacatcaagaaga 343
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 147 ctgtggtcgccggaggaggaccagaagctc 176
||||||||||||||||||||| ||||||||
Sbjct: 46 ctgtggtcgccggaggaggacgagaagctc 75
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||| || ||||||| ||||||||
Sbjct: 147 cggcaagagctgcaggttgaggtggataaactacct 182
>ref|NT_079854.2| Oryza sativa (japonica cultivar-group)
Length = 2592259
Score = 79.8 bits (40), Expect = 1e-012
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 827826 ggaccgacaacgaggtcaagaacttctggaactcgtacatcaagaaga 827779
Score = 58.0 bits (29), Expect = 5e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 402 gacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 1742700 gacaacgagatcaagaactactggaacacgcgcctcaagaagagg 1742656
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 399 accgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
||||||||||| |||||||||| ||||||| | ||||||||||||
Sbjct: 1196712 accgacaacgacgtcaagaacttctggaacacccacctcaagaaga 1196757
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 147 ctgtggtcgccggaggaggaccagaagctc 176
||||||||||||||||||||| ||||||||
Sbjct: 828383 ctgtggtcgccggaggaggacgagaagctc 828354
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||| || ||||||| ||||||||
Sbjct: 828074 cggcaagagctgcaggttgaggtggataaactacct 828039
>emb|Y11351.1|OSMYB1402 O.sativa mRNA for myb factor, 1402 bp
Length = 1402
Score = 79.8 bits (40), Expect = 1e-012
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 353 gctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggt 412
||||||||||| |||||||| |||||| |||| |||| |||||||| ||||||||| |
Sbjct: 398 gctcggcaacaggtggtccaagatcgcgtcgcacctgccgggcaggacggacaacgagat 457
Query: 413 caagaactactggaactcgtacctcaagaaga 444
||||||| |||||||| || || |||||||||
Sbjct: 458 caagaaccactggaacacgcacatcaagaaga 489
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 79.8 bits (40), Expect = 1e-012
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 14432129 ggaccgacaacgaggtcaagaacttctggaactcgtacatcaagaaga 14432082
Score = 63.9 bits (32), Expect = 8e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactacct 283
||||||||||||||||||||||||||||||||
Sbjct: 10682628 aagagctgcaggctgcggtggatcaactacct 10682597
Score = 60.0 bits (30), Expect = 1e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 16689211 aagagctgccggctgcggtggctcaactacctgcggccgggg 16689170
Score = 58.0 bits (29), Expect = 5e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 402 gacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 15345958 gacaacgagatcaagaactactggaacacgcgcctcaagaagagg 15345914
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacct 436
||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 10677987 aggacggacaacgagatcaagaactactggaactcgcacct 10677947
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 399 accgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
||||||||||| |||||||||| ||||||| | ||||||||||||
Sbjct: 14800614 accgacaacgacgtcaagaacttctggaacacccacctcaagaaga 14800659
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 147 ctgtggtcgccggaggaggaccagaagctc 176
||||||||||||||||||||| ||||||||
Sbjct: 14432686 ctgtggtcgccggaggaggacgagaagctc 14432657
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 21014283 aggacggacaacgagatcaagaactactggaac 21014315
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||| || ||||||| ||||||||
Sbjct: 14432377 cggcaagagctgcaggttgaggtggataaactacct 14432342
Score = 46.1 bits (23), Expect = 0.019
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 399 accgacaacgaggtcaagaactactgg 425
|||||||||||| ||||||||||||||
Sbjct: 11297094 accgacaacgagatcaagaactactgg 11297068
Score = 46.1 bits (23), Expect = 0.019
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactgga 426
||||| ||||||||| |||||||||||||||
Sbjct: 2324391 aggacggacaacgagatcaagaactactgga 2324361
Score = 42.1 bits (21), Expect = 0.30
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| |||||||| || |||||||||||||||
Sbjct: 10333709 aggacggacaacgacgtgaagaactactggaac 10333677
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 79.8 bits (40), Expect = 1e-012
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 14437154 ggaccgacaacgaggtcaagaacttctggaactcgtacatcaagaaga 14437107
Score = 63.9 bits (32), Expect = 8e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactacct 283
||||||||||||||||||||||||||||||||
Sbjct: 10684527 aagagctgcaggctgcggtggatcaactacct 10684496
Score = 60.0 bits (30), Expect = 1e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 252 aagagctgcaggctgcggtggatcaactaccttcggccgggg 293
||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 16695578 aagagctgccggctgcggtggctcaactacctgcggccgggg 16695537
Score = 58.0 bits (29), Expect = 5e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 402 gacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 15351424 gacaacgagatcaagaactactggaacacgcgcctcaagaagagg 15351380
Score = 58.0 bits (29), Expect = 5e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaactcgtacct 436
||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 10679886 aggacggacaacgagatcaagaactactggaactcgcacct 10679846
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 399 accgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
||||||||||| |||||||||| ||||||| | ||||||||||||
Sbjct: 14806080 accgacaacgacgtcaagaacttctggaacacccacctcaagaaga 14806125
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 147 ctgtggtcgccggaggaggaccagaagctc 176
||||||||||||||||||||| ||||||||
Sbjct: 14437711 ctgtggtcgccggaggaggacgagaagctc 14437682
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 21021254 aggacggacaacgagatcaagaactactggaac 21021286
Score = 48.1 bits (24), Expect = 0.005
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||| || ||||||| ||||||||
Sbjct: 14437402 cggcaagagctgcaggttgaggtggataaactacct 14437367
Score = 46.1 bits (23), Expect = 0.019
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 399 accgacaacgaggtcaagaactactgg 425
|||||||||||| ||||||||||||||
Sbjct: 11300331 accgacaacgagatcaagaactactgg 11300305
Score = 46.1 bits (23), Expect = 0.019
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactgga 426
||||| ||||||||| |||||||||||||||
Sbjct: 2324281 aggacggacaacgagatcaagaactactgga 2324251
Score = 42.1 bits (21), Expect = 0.30
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| |||||||| || |||||||||||||||
Sbjct: 10335608 aggacggacaacgacgtgaagaactactggaac 10335576
>gb|D47363.1|D47363 RICS12691A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 406
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 219 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 268
>dbj|AK111782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084H22, full
insert sequence
Length = 1514
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 422 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 471
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 571 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 630
Query: 443 ga 444
||
Sbjct: 631 ga 632
>gb|AACV01002173.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002173, whole
genome shotgun sequence
Length = 2583
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 1340 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 1291
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 1070 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 1011
Query: 443 ga 444
||
Sbjct: 1010 ga 1009
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 29207313 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 29207264
Score = 65.9 bits (33), Expect = 2e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 243 cggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 25666912 cggaacgggaagagctgcaggctgcggtggctcaactacct 25666952
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||| ||| |||| ||||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 20316496 tgcccggccggacggacaacgagatcaagaacttctggaactcgtgcctcaagaaga 20316440
Score = 63.9 bits (32), Expect = 8e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| |||||||||||||||||
Sbjct: 11346614 cggcaagagctgcaggcttcggtggatcaactacct 11346649
Score = 63.9 bits (32), Expect = 8e-008
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 366 tggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactgg 425
|||||||||||||| | |||| |||| || ||||| ||||||||| ||||||||||||||
Sbjct: 10931137 tggtccaggatcgcgcagcacatgccggggaggacggacaacgagatcaagaactactgg 10931196
Score = 63.9 bits (32), Expect = 8e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||||||||||||||| ||||||||||
Sbjct: 4915646 cggcaagagctgcaggctgcggtggctcaactacct 4915611
Score = 61.9 bits (31), Expect = 3e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||||||||||||
Sbjct: 29543904 ggcaagagctgcaggctgaggtggatcaactacct 29543938
Score = 56.0 bits (28), Expect = 2e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaa 427
|||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 3518085 tgccgggcaggacggacaacgagatcaagaactactggaa 3518046
Score = 54.0 bits (27), Expect = 8e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 360 aacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaac 419
|||| |||||||| |||||| |||| | || ||| |||||||||||||| ||||||||
Sbjct: 25667029 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 25667088
Query: 420 tactgga 426
|||||||
Sbjct: 25667089 tactgga 25667095
Score = 54.0 bits (27), Expect = 8e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||| ||||||||
Sbjct: 3518434 ggcaagagctgcaggctgaggtggatgaactacct 3518400
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
|||| |||||||| |||||||||||||||||| | | ||||||||||||
Sbjct: 30191875 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaagagg 30191924
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 29207043 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 29206984
Query: 443 ga 444
||
Sbjct: 29206983 ga 29206982
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactcg 431
||||||||| ||||||||||||||||||||
Sbjct: 28870911 gacaacgagatcaagaactactggaactcg 28870940
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 38006655 aggacggacaacgagatcaagaactactggaac 38006687
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 147 ctgtggtcgccggaggaggaccagaagct 175
||||||||||||||||||||| |||||||
Sbjct: 20317483 ctgtggtcgccggaggaggacgagaagct 20317455
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 384 cacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacct 436
|||||||| || |||| ||||| ||| |||||||||||||||||||| ||||
Sbjct: 11351810 cacttgcccgggcggacggacaatgagatcaagaactactggaactcgcacct 11351862
Score = 48.1 bits (24), Expect = 0.005
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 342 ctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggacc 401
|||||||||| ||||||||||| |||||| | ||||| | | | |||||| | |||
Sbjct: 43170088 ctccacgccaagctcggcaacaggtggtctcgcatcgccaagagcattcctggccgcacc 43170147
Query: 402 gacaacgaggtcaagaactactgg 425
||||||||| ||||||||||||||
Sbjct: 43170148 gacaacgagatcaagaactactgg 43170171
Score = 48.1 bits (24), Expect = 0.005
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 252 aagagctgcaggctgcggtggatcaactacct 283
|||||||| |||||||||||| ||||||||||
Sbjct: 28324318 aagagctgtaggctgcggtggctcaactacct 28324349
Score = 46.1 bits (23), Expect = 0.019
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||| | ||||||||||||||
Sbjct: 20317089 ggcaagagttgcaggctgagatggatcaactacct 20317055
Score = 46.1 bits (23), Expect = 0.019
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 141 aagggcctgtggtcgccggaggaggac 167
||||| |||||||||||||||||||||
Sbjct: 3518694 aaggggctgtggtcgccggaggaggac 3518668
Score = 46.1 bits (23), Expect = 0.019
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactgga 426
||||| ||||||||| |||||||||||||||
Sbjct: 1547150 aggacggacaacgagatcaagaactactgga 1547120
Score = 42.1 bits (21), Expect = 0.30
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactc 430
||||| ||||||||||||| |||||||||
Sbjct: 29544315 gacaatgaggtcaagaacttctggaactc 29544343
Score = 42.1 bits (21), Expect = 0.30
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 143 gggcctgtggtcgccggaggaggaccagaagctccgcgactacat 187
||||| ||||||||||||||||||| | ||| |||||||||||
Sbjct: 4915854 gggcccgtggtcgccggaggaggacgacgcgctgcgcgactacat 4915810
Score = 42.1 bits (21), Expect = 0.30
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 231 gccgggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||| ||||||||||||| | || |||||||| ||||||||
Sbjct: 3529814 gccgggctgcagcgctgcggcaagagctgccgcctccggtggatgaactacct 3529866
>ref|XM_472754.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1038
Score = 75.8 bits (38), Expect = 2e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 154 cgccggaggaggaccagaagctccgcgactacattctcctccacggccacggctgctgga 213
|||||||||||||||||||||| | | |||||| | ||||||||||||||||||
Sbjct: 53 cgccggaggaggaccagaagctgctggcctacatcgagcagcacggccacggctgctggc 112
Query: 214 gcgcgctccccgcgaaagccgggctccagcggaacggcaagagctgcaggctgcggtgga 273
|| |||| ||| | || |||||||| |||||| ||||||||||||| | || |||||||
Sbjct: 113 gctcgctaccctccaaggccgggctgcagcggtgcggcaagagctgccgactccggtgga 172
Query: 274 tcaactaccttcggccgg 291
|||||||| |||||||
Sbjct: 173 cgaactacctccggccgg 190
Score = 52.0 bits (26), Expect = 3e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactcgtacctcaagaag 443
||||||||| ||||||||||||||||| || |||| ||||||
Sbjct: 301 gacaacgagatcaagaactactggaacacgcacctaaagaag 342
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 3654696 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 3654647
Score = 65.9 bits (33), Expect = 2e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 243 cggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 114295 cggaacgggaagagctgcaggctgcggtggctcaactacct 114335
Score = 61.9 bits (31), Expect = 3e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||||||||||||
Sbjct: 3991287 ggcaagagctgcaggctgaggtggatcaactacct 3991321
Score = 54.0 bits (27), Expect = 8e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 360 aacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaac 419
|||| |||||||| |||||| |||| | || ||| |||||||||||||| ||||||||
Sbjct: 114412 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 114471
Query: 420 tactgga 426
|||||||
Sbjct: 114472 tactgga 114478
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
|||| |||||||| |||||||||||||||||| | | ||||||||||||
Sbjct: 4639258 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaagagg 4639307
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 3654426 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 3654367
Query: 443 ga 444
||
Sbjct: 3654366 ga 3654365
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactcg 431
||||||||| ||||||||||||||||||||
Sbjct: 3318294 gacaacgagatcaagaactactggaactcg 3318323
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 12454038 aggacggacaacgagatcaagaactactggaac 12454070
Score = 48.1 bits (24), Expect = 0.005
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 252 aagagctgcaggctgcggtggatcaactacct 283
|||||||| |||||||||||| ||||||||||
Sbjct: 2771701 aagagctgtaggctgcggtggctcaactacct 2771732
Score = 42.1 bits (21), Expect = 0.30
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactc 430
||||| ||||||||||||| |||||||||
Sbjct: 3991698 gacaatgaggtcaagaacttctggaactc 3991726
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0421H07
Length = 158126
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 87009 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 86960
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 86739 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 86680
Query: 443 ga 444
||
Sbjct: 86679 ga 86678
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 3578939 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 3578890
Score = 65.9 bits (33), Expect = 2e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 243 cggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 133972 cggaacgggaagagctgcaggctgcggtggctcaactacct 134012
Score = 61.9 bits (31), Expect = 3e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||||||||||||
Sbjct: 3902251 ggcaagagctgcaggctgaggtggatcaactacct 3902285
Score = 54.0 bits (27), Expect = 8e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 360 aacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaac 419
|||| |||||||| |||||| |||| | || ||| |||||||||||||| ||||||||
Sbjct: 134089 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 134148
Query: 420 tactgga 426
|||||||
Sbjct: 134149 tactgga 134155
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
|||| |||||||| |||||||||||||||||| | | ||||||||||||
Sbjct: 4580521 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaagagg 4580570
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 3578669 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 3578610
Query: 443 ga 444
||
Sbjct: 3578609 ga 3578608
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactcg 431
||||||||| ||||||||||||||||||||
Sbjct: 3257865 gacaacgagatcaagaactactggaactcg 3257894
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 12183410 aggacggacaacgagatcaagaactactggaac 12183442
Score = 48.1 bits (24), Expect = 0.005
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 342 ctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggacc 401
|||||||||| ||||||||||| |||||| | ||||| | | | |||||| | |||
Sbjct: 17241643 ctccacgccaagctcggcaacaggtggtctcgcatcgccaagagcattcctggccgcacc 17241702
Query: 402 gacaacgaggtcaagaactactgg 425
||||||||| ||||||||||||||
Sbjct: 17241703 gacaacgagatcaagaactactgg 17241726
Score = 48.1 bits (24), Expect = 0.005
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 252 aagagctgcaggctgcggtggatcaactacct 283
|||||||| |||||||||||| ||||||||||
Sbjct: 2704841 aagagctgtaggctgcggtggctcaactacct 2704872
Score = 42.1 bits (21), Expect = 0.30
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactc 430
||||| ||||||||||||| |||||||||
Sbjct: 3902662 gacaatgaggtcaagaacttctggaactc 3902690
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 28780660 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 28780611
Score = 65.9 bits (33), Expect = 2e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 243 cggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 25335693 cggaacgggaagagctgcaggctgcggtggctcaactacct 25335733
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||| ||| |||| ||||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 19900360 tgcccggccggacggacaacgagatcaagaacttctggaactcgtgcctcaagaaga 19900304
Score = 63.9 bits (32), Expect = 8e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| |||||||||||||||||
Sbjct: 11493194 cggcaagagctgcaggcttcggtggatcaactacct 11493229
Score = 63.9 bits (32), Expect = 8e-008
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 366 tggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactgg 425
|||||||||||||| | |||| |||| || ||||| ||||||||| ||||||||||||||
Sbjct: 11127228 tggtccaggatcgcgcagcacatgccggggaggacggacaacgagatcaagaactactgg 11127287
Score = 63.9 bits (32), Expect = 8e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||||||||||||||| ||||||||||
Sbjct: 4924143 cggcaagagctgcaggctgcggtggctcaactacct 4924108
Score = 61.9 bits (31), Expect = 3e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||||||||||||
Sbjct: 29103972 ggcaagagctgcaggctgaggtggatcaactacct 29104006
Score = 56.0 bits (28), Expect = 2e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaa 427
|||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 3582494 tgccgggcaggacggacaacgagatcaagaactactggaa 3582455
Score = 54.0 bits (27), Expect = 8e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 360 aacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaac 419
|||| |||||||| |||||| |||| | || ||| |||||||||||||| ||||||||
Sbjct: 25335810 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 25335869
Query: 420 tactgga 426
|||||||
Sbjct: 25335870 tactgga 25335876
Score = 54.0 bits (27), Expect = 8e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||| ||||||||
Sbjct: 3582843 ggcaagagctgcaggctgaggtggatgaactacct 3582809
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
|||| |||||||| |||||||||||||||||| | | ||||||||||||
Sbjct: 29782242 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaagagg 29782291
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 28780390 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 28780331
Query: 443 ga 444
||
Sbjct: 28780330 ga 28780329
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactcg 431
||||||||| ||||||||||||||||||||
Sbjct: 28459586 gacaacgagatcaagaactactggaactcg 28459615
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 37385131 aggacggacaacgagatcaagaactactggaac 37385163
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 147 ctgtggtcgccggaggaggaccagaagct 175
||||||||||||||||||||| |||||||
Sbjct: 19901347 ctgtggtcgccggaggaggacgagaagct 19901319
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 384 cacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacct 436
|||||||| || |||| ||||| ||| |||||||||||||||||||| ||||
Sbjct: 11498390 cacttgcccgggcggacggacaatgagatcaagaactactggaactcgcacct 11498442
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 5672349 aggacggacaacgagatcaagaactactggaac 5672317
Score = 48.1 bits (24), Expect = 0.005
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 342 ctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggacc 401
|||||||||| ||||||||||| |||||| | ||||| | | | |||||| | |||
Sbjct: 42443364 ctccacgccaagctcggcaacaggtggtctcgcatcgccaagagcattcctggccgcacc 42443423
Query: 402 gacaacgaggtcaagaactactgg 425
||||||||| ||||||||||||||
Sbjct: 42443424 gacaacgagatcaagaactactgg 42443447
Score = 48.1 bits (24), Expect = 0.005
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 252 aagagctgcaggctgcggtggatcaactacct 283
|||||||| |||||||||||| ||||||||||
Sbjct: 27906562 aagagctgtaggctgcggtggctcaactacct 27906593
Score = 46.1 bits (23), Expect = 0.019
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||| | ||||||||||||||
Sbjct: 19900953 ggcaagagttgcaggctgagatggatcaactacct 19900919
Score = 46.1 bits (23), Expect = 0.019
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 141 aagggcctgtggtcgccggaggaggac 167
||||| |||||||||||||||||||||
Sbjct: 3583103 aaggggctgtggtcgccggaggaggac 3583077
Score = 46.1 bits (23), Expect = 0.019
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactgga 426
||||| ||||||||| |||||||||||||||
Sbjct: 1573906 aggacggacaacgagatcaagaactactgga 1573876
Score = 42.1 bits (21), Expect = 0.30
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactc 430
||||| ||||||||||||| |||||||||
Sbjct: 29104383 gacaatgaggtcaagaacttctggaactc 29104411
Score = 42.1 bits (21), Expect = 0.30
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 143 gggcctgtggtcgccggaggaggaccagaagctccgcgactacat 187
||||| ||||||||||||||||||| | ||| |||||||||||
Sbjct: 4924351 gggcccgtggtcgccggaggaggacgacgcgctgcgcgactacat 4924307
Score = 42.1 bits (21), Expect = 0.30
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 231 gccgggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||| ||||||||||||| | || |||||||| ||||||||
Sbjct: 3594889 gccgggctgcagcgctgcggcaagagctgccgcctccggtggatgaactacct 3594941
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 75.8 bits (38), Expect = 2e-011
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 234 gggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 29126643 gggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 29126594
Score = 65.9 bits (33), Expect = 2e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 243 cggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 25586692 cggaacgggaagagctgcaggctgcggtggctcaactacct 25586732
Score = 65.9 bits (33), Expect = 2e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaaga 444
|||| ||| |||| ||||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 20237779 tgcccggccggacggacaacgagatcaagaacttctggaactcgtgcctcaagaaga 20237723
Score = 63.9 bits (32), Expect = 8e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| |||||||||||||||||
Sbjct: 11348832 cggcaagagctgcaggcttcggtggatcaactacct 11348867
Score = 63.9 bits (32), Expect = 8e-008
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 366 tggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaactactgg 425
|||||||||||||| | |||| |||| || ||||| ||||||||| ||||||||||||||
Sbjct: 10933355 tggtccaggatcgcgcagcacatgccggggaggacggacaacgagatcaagaactactgg 10933414
Score = 63.9 bits (32), Expect = 8e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 248 cggcaagagctgcaggctgcggtggatcaactacct 283
||||||||||||||||||||||||| ||||||||||
Sbjct: 4917844 cggcaagagctgcaggctgcggtggctcaactacct 4917809
Score = 61.9 bits (31), Expect = 3e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||||||||||||
Sbjct: 29463234 ggcaagagctgcaggctgaggtggatcaactacct 29463268
Score = 56.0 bits (28), Expect = 2e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 388 tgcctggcaggaccgacaacgaggtcaagaactactggaa 427
|||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 3520283 tgccgggcaggacggacaacgagatcaagaactactggaa 3520244
Score = 54.0 bits (27), Expect = 8e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 360 aacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtcaagaac 419
|||| |||||||| |||||| |||| | || ||| |||||||||||||| ||||||||
Sbjct: 25586809 aacaggtggtccaagatcgccaagcacctccccggccggaccgacaacgagatcaagaac 25586868
Query: 420 tactgga 426
|||||||
Sbjct: 25586869 tactgga 25586875
Score = 54.0 bits (27), Expect = 8e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||||||||||||| ||||||| ||||||||
Sbjct: 3520632 ggcaagagctgcaggctgaggtggatgaactacct 3520598
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 397 ggaccgacaacgaggtcaagaactactggaactcgtacctcaagaagagg 446
|||| |||||||| |||||||||||||||||| | | ||||||||||||
Sbjct: 30111205 ggacggacaacgacgtcaagaactactggaacaccaagctcaagaagagg 30111254
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 29126373 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 29126314
Query: 443 ga 444
||
Sbjct: 29126313 ga 29126312
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactcg 431
||||||||| ||||||||||||||||||||
Sbjct: 28790241 gacaacgagatcaagaactactggaactcg 28790270
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 396 aggaccgacaacgaggtcaagaactactggaac 428
||||| ||||||||| |||||||||||||||||
Sbjct: 37925985 aggacggacaacgagatcaagaactactggaac 37926017
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 147 ctgtggtcgccggaggaggaccagaagct 175
||||||||||||||||||||| |||||||
Sbjct: 20238766 ctgtggtcgccggaggaggacgagaagct 20238738
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 384 cacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacct 436
|||||||| || |||| ||||| ||| |||||||||||||||||||| ||||
Sbjct: 11354028 cacttgcccgggcggacggacaatgagatcaagaactactggaactcgcacct 11354080
Score = 48.1 bits (24), Expect = 0.005
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 342 ctccacgccacgctcggcaacaagtggtccaggatcgcacggcacttgcctggcaggacc 401
|||||||||| ||||||||||| |||||| | ||||| | | | |||||| | |||
Sbjct: 43089418 ctccacgccaagctcggcaacaggtggtctcgcatcgccaagagcattcctggccgcacc 43089477
Query: 402 gacaacgaggtcaagaactactgg 425
||||||||| ||||||||||||||
Sbjct: 43089478 gacaacgagatcaagaactactgg 43089501
Score = 48.1 bits (24), Expect = 0.005
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 252 aagagctgcaggctgcggtggatcaactacct 283
|||||||| |||||||||||| ||||||||||
Sbjct: 28243648 aagagctgtaggctgcggtggctcaactacct 28243679
Score = 46.1 bits (23), Expect = 0.019
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 249 ggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||||||| | ||||||||||||||
Sbjct: 20238372 ggcaagagttgcaggctgagatggatcaactacct 20238338
Score = 46.1 bits (23), Expect = 0.019
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 141 aagggcctgtggtcgccggaggaggac 167
||||| |||||||||||||||||||||
Sbjct: 3520892 aaggggctgtggtcgccggaggaggac 3520866
Score = 46.1 bits (23), Expect = 0.019
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 396 aggaccgacaacgaggtcaagaactactgga 426
||||| ||||||||| |||||||||||||||
Sbjct: 1549348 aggacggacaacgagatcaagaactactgga 1549318
Score = 42.1 bits (21), Expect = 0.30
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 402 gacaacgaggtcaagaactactggaactc 430
||||| ||||||||||||| |||||||||
Sbjct: 29463645 gacaatgaggtcaagaacttctggaactc 29463673
Score = 42.1 bits (21), Expect = 0.30
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 143 gggcctgtggtcgccggaggaggaccagaagctccgcgactacat 187
||||| ||||||||||||||||||| | ||| |||||||||||
Sbjct: 4918052 gggcccgtggtcgccggaggaggacgacgcgctgcgcgactacat 4918008
Score = 42.1 bits (21), Expect = 0.30
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 231 gccgggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| ||||| ||||||||||||| | || |||||||| ||||||||
Sbjct: 3532012 gccgggctgcagcgctgcggcaagagctgccgcctccggtggatgaactacct 3532064
>dbj|AK108621.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D04, full
insert sequence
Length = 1399
Score = 73.8 bits (37), Expect = 8e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 355 tcggcaacaagtggtccaggatcgcacggcacttgcctggcaggaccgacaacgaggtca 414
|||||||||||||||||| |||||| ||| |||| ||| |||||||||||||| |||
Sbjct: 374 tcggcaacaagtggtccatgatcgcggcgcagctgcccggccggaccgacaacgagatca 433
Query: 415 agaactactggaactcgtacctcaagaag 443
||||||| |||||| | |||||||||||
Sbjct: 434 agaactattggaacactcacctcaagaag 462
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 248 cggcaagagctgcaggctgcggtggatcaactaccttcggccgg 291
||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 267 cggcaagagctgccggctgcggtggacgaactacctccggccgg 310
>ref|NM_192221.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 909
Score = 73.8 bits (37), Expect = 8e-011
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 235 ggctccagcggaacggcaagagctgcaggctgcggtggatcaactacct 283
|||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 146 ggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacct 194
Score = 52.0 bits (26), Expect = 3e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 383 gcacttgcctggcaggaccgacaacgaggtcaagaactactggaactcgtacctcaagaa 442
||||||||| || ||||| ||||||||| ||||||||| ||||||| | |||||||||
Sbjct: 294 gcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaa 353
Query: 443 ga 444
||
Sbjct: 354 ga 355
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,188,250
Number of Sequences: 438736
Number of extensions: 1188250
Number of successful extensions: 50372
Number of sequences better than 0.5: 491
Number of HSP's better than 0.5 without gapping: 585
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 35025
Number of HSP's gapped (non-prelim): 15319
length of query: 530
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 509
effective length of database: 2,791,206,460
effective search space: 1420724088140
effective search space used: 1420724088140
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)