BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478398.2.5
(1385 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK121850.1| Oryza sativa (japonica cultivar-group) cDNA... 773 0.0
gb|AY224528.1| Oryza sativa (japonica cultivar-group) isola... 773 0.0
ref|NM_187345.1| Oryza sativa (japonica cultivar-group), mRNA 773 0.0
gb|CB667866.1|CB667866 OSJNEd15G13.r OSJNEd Oryza sativa (j... 620 e-175
gb|CB673754.1|CB673754 OSJNEe08H04.r OSJNEe Oryza sativa (j... 462 e-127
gb|CV722889.1|CV722889 root--01-O01.g1 Rice root lambda pha... 301 5e-079
dbj|AP003964.1| Oryza sativa (japonica cultivar-group) chro... 220 2e-054
dbj|AP003864.4| Oryza sativa (japonica cultivar-group) geno... 220 2e-054
gb|AACV01016278.1| Oryza sativa (japonica cultivar-group) c... 220 2e-054
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 220 2e-054
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 220 2e-054
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 220 2e-054
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 220 2e-054
dbj|AK111555.1| Oryza sativa (japonica cultivar-group) cDNA... 218 6e-054
ref|NM_197780.1| Oryza sativa (japonica cultivar-group) put... 218 6e-054
gb|CB659259.1|CB659259 OSJNEc16B11.r OSJNEc Oryza sativa (j... 214 1e-052
gb|CB662971.1|CB662971 OSJNEd07H10.r OSJNEd Oryza sativa (j... 212 4e-052
gb|CB683257.1|CB683257 OSJNEf11G15.f OSJNEf Oryza sativa (j... 210 2e-051
gb|CB654950.1|CB654950 OSJNEc07O06.r OSJNEc Oryza sativa (j... 200 1e-048
gb|CB649444.1|CB649444 OSJNEb13F22.r OSJNEb Oryza sativa (j... 172 3e-040
gb|CB650782.1|CB650782 OSJNEb15G22.r OSJNEb Oryza sativa (j... 172 3e-040
gb|CB654997.1|CB654997 OSJNEc07P17.r OSJNEc Oryza sativa (j... 172 3e-040
gb|CB656195.1|CB656195 OSJNEc10E04.r OSJNEc Oryza sativa (j... 172 3e-040
gb|CB649443.1|CB649443 OSJNEb13F22.f OSJNEb Oryza sativa (j... 165 8e-038
gb|CB650781.1|CB650781 OSJNEb15G22.f OSJNEb Oryza sativa (j... 149 5e-033
gb|CB654996.1|CB654996 OSJNEc07P17.f OSJNEc Oryza sativa (j... 149 5e-033
gb|CB656194.1|CB656194 OSJNEc10E04.f OSJNEc Oryza sativa (j... 141 1e-030
gb|AU030812.1|AU030812 AU030812 Rice cDNA from immature lea... 137 2e-029
gb|CB000323.1|CB000323 S345U_C12 Rice cold stress germinati... 129 4e-027
gb|CB659258.1|CB659258 OSJNEc16B11.f OSJNEc Oryza sativa (j... 121 1e-024
gb|CB662970.1|CB662970 OSJNEd07H10.f OSJNEd Oryza sativa (j... 117 2e-023
gb|CV152500.1|CV152500 LS46-S.SEQ Cold stressed rice cDNA l... 113 3e-022
gb|AU095208.1|AU095208 AU095208 Rice cDNA from immature lea... 98 2e-017
gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10... 86 6e-014
gb|AACV01022119.1| Oryza sativa (japonica cultivar-group) c... 86 6e-014
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 86 6e-014
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 86 6e-014
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 86 6e-014
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 86 6e-014
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 86 6e-014
gb|AU183937.1|AU183937 AU183937 Rice cDNA from immature lea... 66 5e-008
gb|AU095209.1|AU095209 AU095209 Rice cDNA from immature lea... 54 2e-004
>dbj|AK121850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101L24, full
insert sequence
Length = 1630
Score = 773 bits (390), Expect = 0.0
Identities = 615/690 (89%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 333 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 392
Query: 357 gaaggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagac 416
|||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 393 gaaggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggat 452
Query: 417 acctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgat 476
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||
Sbjct: 453 cactcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgat 512
Query: 477 gatgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattat 536
||||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||
Sbjct: 513 gatgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattat 572
Query: 537 gattatgctctcgatctcattttagatattgaatcatctcatggtgatatgttcactgag 596
||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||| ||
Sbjct: 573 gattatgctcttgatctcattttagatatcgaatcttctcacggtgacatgttcaccgaa 632
Query: 597 gaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcacga 656
|||||||| ||||| | || ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 633 gaacaaaacgagctagtggagtcagctgcagagatgttatatgggctgattcatgcacga 692
Query: 657 tacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgacttt 716
|||||| |||||||||||||| |||||||||||||||||||||| || |||||||| |||
Sbjct: 693 tacattttgaccagtaaaggattggctgcaatgctggagaagtacaaaaactatgatttt 752
Query: 717 gggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcagac 776
|| | ||||| || ||||| |||||||||||||| || | |||||||||||||||||
Sbjct: 753 ggaagatgcccacgagtttattgctgtggtcaaccctgtttaccagttggacaatcagat 812
Query: 777 atccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactaccca 836
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 813 atacaccgatctagtactgtgaagatatactgccccaagtgtgaagacatctactatcca 872
Query: 837 cggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctg 896
||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 873 cggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacattcccgcacctg 932
Query: 897 ttcctgatgacatacgagcacctcaagccacagaagctctcgcagcgctatgttcctcgt 956
|| |||||||| ||||||||||||||||| ||||| | |||||||||||| |||||||||
Sbjct: 933 tttctgatgacgtacgagcacctcaagcctcagaaaccctcgcagcgctacgttcctcgt 992
Query: 957 gtctttggcttcaagctccacaagccatga 986
|| ||||| |||||||||||||||||||||
Sbjct: 993 gtatttggattcaagctccacaagccatga 1022
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 213 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 268
>gb|AY224528.1| Oryza sativa (japonica cultivar-group) isolate 21042 possible
protein kinase CK2 regulatory subunit mRNA, partial cds
Length = 735
Score = 773 bits (390), Expect = 0.0
Identities = 615/690 (89%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 46 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 105
Query: 357 gaaggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagac 416
|||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 106 gaaggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggat 165
Query: 417 acctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgat 476
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||
Sbjct: 166 cactcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgat 225
Query: 477 gatgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattat 536
||||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||
Sbjct: 226 gatgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattat 285
Query: 537 gattatgctctcgatctcattttagatattgaatcatctcatggtgatatgttcactgag 596
||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||| ||
Sbjct: 286 gattatgctcttgatctcattttagatatcgaatcttctcacggtgacatgttcaccgaa 345
Query: 597 gaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcacga 656
|||||||| ||||| | || ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 346 gaacaaaacgagctagtggagtcagctgcagagatgttatatgggctgattcatgcacga 405
Query: 657 tacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgacttt 716
|||||| |||||||||||||| |||||||||||||||||||||| || |||||||| |||
Sbjct: 406 tacattttgaccagtaaaggattggctgcaatgctggagaagtacaaaaactatgatttt 465
Query: 717 gggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcagac 776
|| | ||||| || ||||| |||||||||||||| || | |||||||||||||||||
Sbjct: 466 ggaagatgcccacgagtttattgctgtggtcaaccctgtttaccagttggacaatcagat 525
Query: 777 atccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactaccca 836
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 526 atacaccgatctagtactgtgaagatatactgccccaagtgtgaagacatctactatcca 585
Query: 837 cggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctg 896
||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 586 cggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacattcccgcacctg 645
Query: 897 ttcctgatgacatacgagcacctcaagccacagaagctctcgcagcgctatgttcctcgt 956
|| |||||||| ||||||||||||||||| ||||| | |||||||||||| |||||||||
Sbjct: 646 tttctgatgacgtacgagcacctcaagcctcagaaaccctcgcagcgctacgttcctcgt 705
Query: 957 gtctttggcttcaagctccacaagccatga 986
|| ||||| |||||||||||||||||||||
Sbjct: 706 gtatttggattcaagctccacaagccatga 735
>ref|NM_187345.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 867
Score = 773 bits (390), Expect = 0.0
Identities = 615/690 (89%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 178 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 237
Query: 357 gaaggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagac 416
|||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 238 gaaggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggat 297
Query: 417 acctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgat 476
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||
Sbjct: 298 cactcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgat 357
Query: 477 gatgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattat 536
||||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||
Sbjct: 358 gatgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattat 417
Query: 537 gattatgctctcgatctcattttagatattgaatcatctcatggtgatatgttcactgag 596
||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||| ||
Sbjct: 418 gattatgctcttgatctcattttagatatcgaatcttctcacggtgacatgttcaccgaa 477
Query: 597 gaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcacga 656
|||||||| ||||| | || ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 478 gaacaaaacgagctagtggagtcagctgcagagatgttatatgggctgattcatgcacga 537
Query: 657 tacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgacttt 716
|||||| |||||||||||||| |||||||||||||||||||||| || |||||||| |||
Sbjct: 538 tacattttgaccagtaaaggattggctgcaatgctggagaagtacaaaaactatgatttt 597
Query: 717 gggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcagac 776
|| | ||||| || ||||| |||||||||||||| || | |||||||||||||||||
Sbjct: 598 ggaagatgcccacgagtttattgctgtggtcaaccctgtttaccagttggacaatcagat 657
Query: 777 atccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactaccca 836
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 658 atacaccgatctagtactgtgaagatatactgccccaagtgtgaagacatctactatcca 717
Query: 837 cggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctg 896
||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 718 cggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacattcccgcacctg 777
Query: 897 ttcctgatgacatacgagcacctcaagccacagaagctctcgcagcgctatgttcctcgt 956
|| |||||||| ||||||||||||||||| ||||| | |||||||||||| |||||||||
Sbjct: 778 tttctgatgacgtacgagcacctcaagcctcagaaaccctcgcagcgctacgttcctcgt 837
Query: 957 gtctttggcttcaagctccacaagccatga 986
|| ||||| |||||||||||||||||||||
Sbjct: 838 gtatttggattcaagctccacaagccatga 867
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 58 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 113
>gb|CB667866.1|CB667866 OSJNEd15G13.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15G13 3', mRNA sequence
Length = 841
Score = 620 bits (313), Expect = e-175
Identities = 499/561 (88%)
Strand = Plus / Minus
Query: 426 atttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactac 485
||||||||||| |||| ||||||||||||| ||||||||||| || |||||||| ||
Sbjct: 841 atttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatgatgattat 782
Query: 486 attcaagacgacttcaacctttgtggcctcagcagccaagttccttattatgattatgct 545
|| ||||| ||||||||||| ||||| || ||||| |||||||| |||||||||||||||
Sbjct: 781 atacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatgattatgct 722
Query: 546 ctcgatctcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaat 605
|| ||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||||||
Sbjct: 721 cttgatctcattttagatatcgaatcttctcacggtgacatgttcaccgaagaacaaaac 662
Query: 606 gagctcggagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctg 665
||||| | || ||||||||||||||| | ||||||||||| ||||||||||||||| ||
Sbjct: 661 gagctagtggagtcagctgcagagatgttatatgggctgattcatgcacgatacattttg 602
Query: 666 accagtaaaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgc 725
|||||||||||| |||||||||||||||||||||| || |||||||| ||||| | |||
Sbjct: 601 accagtaaaggattggctgcaatgctggagaagtacaaaaactatgattttggaagatgc 542
Query: 726 ccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcga 785
|| || ||||| |||||||||||||| || | ||||||||||||||||| || || |||
Sbjct: 541 ccacgagtttattgctgtggtcaaccctgtttaccagttggacaatcagatatacaccga 482
Query: 786 tctagtaccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaag 845
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 tctagtactgtgaagatatactgccccaagtgtgaagacatctactatccacggtccaag 422
Query: 846 taccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatg 905
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 421 taccaaggcaacatcgacggcgcatactttgggacaacattcccgcacctgtttctgatg 362
Query: 906 acatacgagcacctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggc 965
|| ||||||||||||||||| ||||| | |||||||||||| ||||||||||| |||||
Sbjct: 361 acgtacgagcacctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttgga 302
Query: 966 ttcaagctccacaagccatga 986
|||||||||||||||||||||
Sbjct: 301 ttcaagctccacaagccatga 281
>gb|CB673754.1|CB673754 OSJNEe08H04.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08H04 3', mRNA sequence
Length = 719
Score = 462 bits (233), Expect = e-127
Identities = 335/369 (90%)
Strand = Plus / Minus
Query: 618 tcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaagga 677
||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 698 tcagctgcagagatgttatatgggctgattcatgcacgatacattttgaccagtaaagga 639
Query: 678 ctggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttac 737
|||||||||||||||||||||| || |||||||| ||||| | ||||| || |||||
Sbjct: 638 ttggctgcaatgctggagaagtacaaaaactatgattttggaagatgcccacgagtttat 579
Query: 738 tgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtg 797
|||||||||||||| || | ||||||||||||||||| || || ||||||||||| |||
Sbjct: 578 tgctgtggtcaaccctgtttaccagttggacaatcagatatacaccgatctagtactgtg 519
Query: 798 aagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaac 857
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 518 aagatatactgccccaagtgtgaagacatctactatccacggtccaagtaccaaggcaac 459
Query: 858 atcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcac 917
|||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 458 atcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagcac 399
Query: 918 ctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctccac 977
|||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 398 ctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctccac 339
Query: 978 aagccatga 986
|||||||||
Sbjct: 338 aagccatga 330
>gb|CV722889.1|CV722889 root--01-O01.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--01-O01, mRNA sequence
Length = 487
Score = 301 bits (152), Expect = 5e-079
Identities = 191/204 (93%)
Strand = Plus / Minus
Query: 783 cgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactacccacggtcc 842
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 cgatctagtactgtgaagatatactgccccaagtgtgaagacatctactatccacggtcc 422
Query: 843 aagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctg 902
||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 421 aagtaccaaggcaacatcgacggcgcatactttgggacaacattcccgcacctgtttctg 362
Query: 903 atgacatacgagcacctcaagccacagaagctctcgcagcgctatgttcctcgtgtcttt 962
||||| ||||||||||||||||| ||||| | |||||||||||| ||||||||||| |||
Sbjct: 361 atgacgtacgagcacctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtattt 302
Query: 963 ggcttcaagctccacaagccatga 986
|| |||||||||||||||||||||
Sbjct: 301 ggattcaagctccacaagccatga 278
>dbj|AP003964.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ2096_F11,
*** SEQUENCING IN PROGRESS ***
Length = 139814
Score = 220 bits (111), Expect = 2e-054
Identities = 192/219 (87%)
Strand = Plus / Minus
Query: 359 aggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagacac 418
|||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 16165 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 16106
Query: 419 ctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatga 478
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||||
Sbjct: 16105 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 16046
Query: 479 tgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatga 538
||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 16045 tgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatga 15986
Query: 539 ttatgctctcgatctcattttagatattgaatcatctca 577
||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 15985 ttatgctcttgatctcattttagatatcgaatcttctca 15947
Score = 188 bits (95), Expect = 6e-045
Identities = 149/167 (89%)
Strand = Plus / Minus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||||||||| || |||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct: 14931 gctggagaagtacaaaaactatgattttggaagatgcccacgagtttattgctgtggtca 14872
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| || | ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 14871 accctgtttaccagttggacaatcagatatacaccgatctagtactgtgaagatatactg 14812
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14811 ccccaagtgtgaagacatctactatccacggtccaagtaccaaggca 14765
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Minus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 14371 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 14312
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 14311 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 14252
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 14251 acaagccatga 14241
Score = 117 bits (59), Expect = 2e-023
Identities = 98/111 (88%)
Strand = Plus / Minus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| |||||||| || |||||||| ||||| | || ||||||||||||||| | |||
Sbjct: 15118 ggtgacatgttcaccgaagaacaaaacgagctagtggagtcagctgcagagatgttatat 15059
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 15058 gggctgattcatgcacgatacattttgaccagtaaaggattggctgcaatg 15008
Score = 89.7 bits (45), Expect = 4e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 17531 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 17472
Query: 357 gaagg 361
|||||
Sbjct: 17471 gaagg 17467
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 17651 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 17596
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1058_B11
Length = 102824
Score = 220 bits (111), Expect = 2e-054
Identities = 192/219 (87%)
Strand = Plus / Plus
Query: 359 aggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagacac 418
|||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 59357 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 59416
Query: 419 ctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatga 478
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||||
Sbjct: 59417 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 59476
Query: 479 tgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatga 538
||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 59477 tgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatga 59536
Query: 539 ttatgctctcgatctcattttagatattgaatcatctca 577
||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 59537 ttatgctcttgatctcattttagatatcgaatcttctca 59575
Score = 188 bits (95), Expect = 6e-045
Identities = 149/167 (89%)
Strand = Plus / Plus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||||||||| || |||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct: 60591 gctggagaagtacaaaaactatgattttggaagatgcccacgagtttattgctgtggtca 60650
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| || | ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 60651 accctgtttaccagttggacaatcagatatacaccgatctagtactgtgaagatatactg 60710
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 60711 ccccaagtgtgaagacatctactatccacggtccaagtaccaaggca 60757
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 61151 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 61210
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 61211 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 61270
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 61271 acaagccatga 61281
Score = 117 bits (59), Expect = 2e-023
Identities = 98/111 (88%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| |||||||| || |||||||| ||||| | || ||||||||||||||| | |||
Sbjct: 60404 ggtgacatgttcaccgaagaacaaaacgagctagtggagtcagctgcagagatgttatat 60463
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 60464 gggctgattcatgcacgatacattttgaccagtaaaggattggctgcaatg 60514
Score = 89.7 bits (45), Expect = 4e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 57991 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 58050
Query: 357 gaagg 361
|||||
Sbjct: 58051 gaagg 58055
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 57871 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 57926
>gb|AACV01016278.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016278, whole
genome shotgun sequence
Length = 22118
Score = 220 bits (111), Expect = 2e-054
Identities = 192/219 (87%)
Strand = Plus / Plus
Query: 359 aggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagacac 418
|||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 2764 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 2823
Query: 419 ctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatga 478
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||||
Sbjct: 2824 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 2883
Query: 479 tgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatga 538
||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 2884 tgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatga 2943
Query: 539 ttatgctctcgatctcattttagatattgaatcatctca 577
||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 2944 ttatgctcttgatctcattttagatatcgaatcttctca 2982
Score = 188 bits (95), Expect = 6e-045
Identities = 149/167 (89%)
Strand = Plus / Plus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||||||||| || |||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct: 3998 gctggagaagtacaaaaactatgattttggaagatgcccacgagtttattgctgtggtca 4057
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| || | ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 4058 accctgtttaccagttggacaatcagatatacaccgatctagtactgtgaagatatactg 4117
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4118 ccccaagtgtgaagacatctactatccacggtccaagtaccaaggca 4164
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 4558 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 4617
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 4618 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 4677
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 4678 acaagccatga 4688
Score = 117 bits (59), Expect = 2e-023
Identities = 98/111 (88%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| |||||||| || |||||||| ||||| | || ||||||||||||||| | |||
Sbjct: 3811 ggtgacatgttcaccgaagaacaaaacgagctagtggagtcagctgcagagatgttatat 3870
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 3871 gggctgattcatgcacgatacattttgaccagtaaaggattggctgcaatg 3921
Score = 89.7 bits (45), Expect = 4e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 1398 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 1457
Query: 357 gaagg 361
|||||
Sbjct: 1458 gaagg 1462
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1278 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 1333
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 220 bits (111), Expect = 2e-054
Identities = 192/219 (87%)
Strand = Plus / Plus
Query: 359 aggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagacac 418
|||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 6090584 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 6090643
Query: 419 ctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatga 478
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||||
Sbjct: 6090644 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 6090703
Query: 479 tgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatga 538
||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 6090704 tgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatga 6090763
Query: 539 ttatgctctcgatctcattttagatattgaatcatctca 577
||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 6090764 ttatgctcttgatctcattttagatatcgaatcttctca 6090802
Score = 188 bits (95), Expect = 6e-045
Identities = 149/167 (89%)
Strand = Plus / Plus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||||||||| || |||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct: 6091818 gctggagaagtacaaaaactatgattttggaagatgcccacgagtttattgctgtggtca 6091877
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| || | ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 6091878 accctgtttaccagttggacaatcagatatacaccgatctagtactgtgaagatatactg 6091937
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6091938 ccccaagtgtgaagacatctactatccacggtccaagtaccaaggca 6091984
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 6092378 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 6092437
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 6092438 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 6092497
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 6092498 acaagccatga 6092508
Score = 117 bits (59), Expect = 2e-023
Identities = 98/111 (88%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| |||||||| || |||||||| ||||| | || ||||||||||||||| | |||
Sbjct: 6091631 ggtgacatgttcaccgaagaacaaaacgagctagtggagtcagctgcagagatgttatat 6091690
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 6091691 gggctgattcatgcacgatacattttgaccagtaaaggattggctgcaatg 6091741
Score = 89.7 bits (45), Expect = 4e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 6089218 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 6089277
Query: 357 gaagg 361
|||||
Sbjct: 6089278 gaagg 6089282
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 6089098 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 6089153
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 220 bits (111), Expect = 2e-054
Identities = 192/219 (87%)
Strand = Plus / Plus
Query: 359 aggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagacac 418
|||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 4079661 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 4079720
Query: 419 ctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatga 478
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||||
Sbjct: 4079721 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 4079780
Query: 479 tgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatga 538
||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 4079781 tgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatga 4079840
Query: 539 ttatgctctcgatctcattttagatattgaatcatctca 577
||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 4079841 ttatgctcttgatctcattttagatatcgaatcttctca 4079879
Score = 188 bits (95), Expect = 6e-045
Identities = 149/167 (89%)
Strand = Plus / Plus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||||||||| || |||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct: 4080895 gctggagaagtacaaaaactatgattttggaagatgcccacgagtttattgctgtggtca 4080954
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| || | ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 4080955 accctgtttaccagttggacaatcagatatacaccgatctagtactgtgaagatatactg 4081014
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4081015 ccccaagtgtgaagacatctactatccacggtccaagtaccaaggca 4081061
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 4081455 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 4081514
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 4081515 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 4081574
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 4081575 acaagccatga 4081585
Score = 117 bits (59), Expect = 2e-023
Identities = 98/111 (88%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| |||||||| || |||||||| ||||| | || ||||||||||||||| | |||
Sbjct: 4080708 ggtgacatgttcaccgaagaacaaaacgagctagtggagtcagctgcagagatgttatat 4080767
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 4080768 gggctgattcatgcacgatacattttgaccagtaaaggattggctgcaatg 4080818
Score = 89.7 bits (45), Expect = 4e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 4078295 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 4078354
Query: 357 gaagg 361
|||||
Sbjct: 4078355 gaagg 4078359
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 4078175 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 4078230
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 220 bits (111), Expect = 2e-054
Identities = 192/219 (87%)
Strand = Plus / Plus
Query: 359 aggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagacac 418
|||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 17479100 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 17479159
Query: 419 ctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatga 478
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||||
Sbjct: 17479160 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 17479219
Query: 479 tgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatga 538
||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 17479220 tgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatga 17479279
Query: 539 ttatgctctcgatctcattttagatattgaatcatctca 577
||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 17479280 ttatgctcttgatctcattttagatatcgaatcttctca 17479318
Score = 188 bits (95), Expect = 6e-045
Identities = 149/167 (89%)
Strand = Plus / Plus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||||||||| || |||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct: 17480334 gctggagaagtacaaaaactatgattttggaagatgcccacgagtttattgctgtggtca 17480393
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| || | ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 17480394 accctgtttaccagttggacaatcagatatacaccgatctagtactgtgaagatatactg 17480453
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 17480454 ccccaagtgtgaagacatctactatccacggtccaagtaccaaggca 17480500
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 17480894 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 17480953
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 17480954 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 17481013
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 17481014 acaagccatga 17481024
Score = 117 bits (59), Expect = 2e-023
Identities = 98/111 (88%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| |||||||| || |||||||| ||||| | || ||||||||||||||| | |||
Sbjct: 17480147 ggtgacatgttcaccgaagaacaaaacgagctagtggagtcagctgcagagatgttatat 17480206
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 17480207 gggctgattcatgcacgatacattttgaccagtaaaggattggctgcaatg 17480257
Score = 89.7 bits (45), Expect = 4e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 17477734 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 17477793
Query: 357 gaagg 361
|||||
Sbjct: 17477794 gaagg 17477798
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 17477614 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 17477669
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 220 bits (111), Expect = 2e-054
Identities = 192/219 (87%)
Strand = Plus / Plus
Query: 359 aggggagtctgattctgatagtgaagcatcagatgttagtggctctgatggagaagacac 418
|||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 18467509 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 18467568
Query: 419 ctcgtggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatga 478
||| |||||||||||||| |||| ||||||||||||| ||||||||||| || |||||
Sbjct: 18467569 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 18467628
Query: 479 tgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatga 538
||| || || ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 18467629 tgattatatacaagatgacttcaacctctgtgggcttagcagtcaagttccatattatga 18467688
Query: 539 ttatgctctcgatctcattttagatattgaatcatctca 577
||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 18467689 ttatgctcttgatctcattttagatatcgaatcttctca 18467727
Score = 188 bits (95), Expect = 6e-045
Identities = 149/167 (89%)
Strand = Plus / Plus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||||||||| || |||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct: 18468743 gctggagaagtacaaaaactatgattttggaagatgcccacgagtttattgctgtggtca 18468802
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| || | ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 18468803 accctgtttaccagttggacaatcagatatacaccgatctagtactgtgaagatatactg 18468862
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 18468863 ccccaagtgtgaagacatctactatccacggtccaagtaccaaggca 18468909
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 18469303 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 18469362
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 18469363 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 18469422
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 18469423 acaagccatga 18469433
Score = 117 bits (59), Expect = 2e-023
Identities = 98/111 (88%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| |||||||| || |||||||| ||||| | || ||||||||||||||| | |||
Sbjct: 18468556 ggtgacatgttcaccgaagaacaaaacgagctagtggagtcagctgcagagatgttatat 18468615
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 18468616 gggctgattcatgcacgatacattttgaccagtaaaggattggctgcaatg 18468666
Score = 89.7 bits (45), Expect = 4e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 297 gaccaccaccgcctcgtcgtgccgtcctccgtgtcgtccatccccaagggccgctgctcc 356
|||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||||||
Sbjct: 18466143 gaccaccagcgcctcgtcgtgccgtcctccgcgtcgtccatgcccaagggacggtgctcc 18466202
Query: 357 gaagg 361
|||||
Sbjct: 18466203 gaagg 18466207
Score = 79.8 bits (40), Expect = 4e-012
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 195 ctggaccggaaacggatcagcgacgcgctagacaagcaccttgagaaggcggtcgc 250
||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 18466023 ctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtcgc 18466078
>dbj|AK111555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051E04, full
insert sequence
Length = 1228
Score = 218 bits (110), Expect = 6e-054
Identities = 431/538 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 376 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 435
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 436 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 495
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 496 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 555
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
| || ||||| || || || ||| |||||||| ||||||||||||| |||||||| |
Sbjct: 556 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaa 615
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
|| ||| ||||||||||||| ||||| | || |||||| |||| || | ||||| |
Sbjct: 616 ttgagtcatctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagca 675
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
| || |||||||||||| ||||||||| ||||||||||||||||| | ||||| || |
Sbjct: 676 agggtctggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccggg 735
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
| ||||| ||||| ||||| || || || | || |||||||| || | | | ||||| |
Sbjct: 736 tatactgttgtggccaaccctgtcttcctgcagggcaatcagatattcctaggtctagca 795
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| |||||||||||||| || || |||||||| | | || ||| | |||||||||||||
Sbjct: 796 cagtgaagatatactgtccaaaatgtgaagatttacattatccaagatccaagtaccaag 855
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
||||||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 856 gcaacattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 913
>ref|NM_197780.1| Oryza sativa (japonica cultivar-group) putative casein kinase II
beta subunit (OSJNBa0027P10.8), mRNA
Length = 1229
Score = 218 bits (110), Expect = 6e-054
Identities = 431/538 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 388 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 447
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 448 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 507
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 508 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 567
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
| || ||||| || || || ||| |||||||| ||||||||||||| |||||||| |
Sbjct: 568 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaa 627
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
|| ||| ||||||||||||| ||||| | || |||||| |||| || | ||||| |
Sbjct: 628 ttgagtcatctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagca 687
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
| || |||||||||||| ||||||||| ||||||||||||||||| | ||||| || |
Sbjct: 688 agggtctggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccggg 747
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
| ||||| ||||| ||||| || || || | || |||||||| || | | | ||||| |
Sbjct: 748 tatactgttgtggccaaccctgtcttcctgcagggcaatcagatattcctaggtctagca 807
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| |||||||||||||| || || |||||||| | | || ||| | |||||||||||||
Sbjct: 808 cagtgaagatatactgtccaaaatgtgaagatttacattatccaagatccaagtaccaag 867
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
||||||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 868 gcaacattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 925
>gb|CB659259.1|CB659259 OSJNEc16B11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16B11 3', mRNA sequence
Length = 842
Score = 214 bits (108), Expect = 1e-052
Identities = 420/524 (80%)
Strand = Plus / Minus
Query: 387 tcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaactta 446
|||||||| ||||| ||||| ||||| ||||| || ||||||||||||| |||| ||
Sbjct: 839 tcagatgtcagtggttctgagggagaggacacatcttggatttcatggttctgcagtttg 780
Query: 447 agagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctt 506
| || ||||||||||||||||| |||||||||| || || || || || |||||||||
Sbjct: 779 cgcggcaatgagttcttctgtgagatcgatgatgattatatacaggatgatttcaacctt 720
Query: 507 tgtggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatatt 566
||||| || |||| || || || |||||||| ||||| || ||||| || ||||| ||
Sbjct: 719 tgtggtctgagcaatcaggtgccatattatgactatgcacttgatcttatcttagacatc 660
Query: 567 gaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgca 626
|| || ||| |||||||| ||||||||||||| |||||||| | || ||| |||||
Sbjct: 659 gagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaattgagtcatctgca 600
Query: 627 gagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgca 686
|||||||| ||||| | || |||||| |||| || | ||||| || || |||||||||
Sbjct: 599 gagatgctgtatggattaattcatgcaagatatatcttaaccagcaagggtctggctgca 540
Query: 687 atgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggt 746
||| ||||||||| ||||||||||||||||| | ||||| || || ||||| |||||
Sbjct: 539 atgttggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggc 480
Query: 747 caaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatac 806
||||| || || || | || |||||||| || | | | ||||| || ||||||||||||
Sbjct: 479 caaccctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatac 420
Query: 807 tgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggc 866
|| || || |||||||| | | || ||| | |||||||||||||||||||| |||||
Sbjct: 419 tgtccaaaatgtgaagatttacattatccaagatccaagtaccaaggcaacattgacgga 360
Query: 867 gcatactttgggacaacgttccctcatctgttcctgatgacata 910
|| |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 359 gcgtactttgggacaacattcccacatctcttcctgatgacata 316
>gb|CB662971.1|CB662971 OSJNEd07H10.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H10 3', mRNA sequence
Length = 920
Score = 212 bits (107), Expect = 4e-052
Identities = 430/538 (79%)
Strand = Plus / Minus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 898 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 839
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| | | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 838 ggttctgcagttgncgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 779
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 778 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 719
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
| || ||||| || || || ||| |||||||| ||||||||||||| |||||||| |
Sbjct: 718 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaa 659
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
|| ||| ||||||||||||| ||||| | || |||||| |||| || | ||||| |
Sbjct: 658 ttgagtcatctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagca 599
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
| || |||||||||||| ||||||||| ||||||||||||||||| | ||||| || |
Sbjct: 598 agggtctggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccggg 539
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
| ||||| ||||| ||||| || || || | || |||||||| || | | | ||||| |
Sbjct: 538 tatactgttgtggccaaccctgtcttcctgcagggcaatcagatattcctaggtctagca 479
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| |||||||||||||| || || |||||||| | | || ||| | |||||||||||||
Sbjct: 478 cagtgaagatatactgtccaaaatgtgaagatttacattatccaagatccaagtaccaag 419
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
||||||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 418 gcaacattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 361
>gb|CB683257.1|CB683257 OSJNEf11G15.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11G15 5', mRNA sequence
Length = 717
Score = 210 bits (106), Expect = 2e-051
Identities = 430/538 (79%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| ||| |||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 70 ctgacagtgaagattcacatgtcagtggttctgagggagaggacacatcttggatttcat 129
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 130 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 189
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 190 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 249
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
| || ||||| || || || ||| |||||||| ||||||||||||| |||||||| |
Sbjct: 250 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaa 309
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
|| ||| ||||||||||||| ||||| | || |||||| |||| || | ||||| |
Sbjct: 310 ttgagtcatctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagca 369
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
| || |||||||||||| ||||||||| ||||||||||||||||| | ||||| || |
Sbjct: 370 agggtctggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccggg 429
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
| ||||| ||||| ||||| || || || | || |||||||| || | | | ||||| |
Sbjct: 430 tatactgttgtggccaaccctgtcttcctgcagggcaatcagatattcctaggtctagca 489
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| |||||||||||||| || || |||||||| | | || ||| | |||||||||||||
Sbjct: 490 cagtgaagatatactgtccaaaatgtgaagatttacattatccaagatccaagtaccaag 549
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
||||||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 550 gcaacattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 607
>gb|CB654950.1|CB654950 OSJNEc07O06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07O06 3', mRNA sequence
Length = 887
Score = 200 bits (101), Expect = 1e-048
Identities = 407/509 (79%)
Strand = Plus / Minus
Query: 402 tctgatggagaagacacctcgtggatttcatggtattgcaacttaagagggaatgagttc 461
||||| ||||| ||||| || ||||||||||||| |||| || | || |||||||||
Sbjct: 874 tctgagggagaggacacatcttggatttcatggttctgcagtttgcgcggcaatgagttc 815
Query: 462 ttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgtggcctcagcagc 521
|||||||| |||||||||| || || || || || |||||||||||||| || ||||
Sbjct: 814 ttctgtgagatcgatgatgattatatacaggatgatttcaacctttgtggtctgagcaat 755
Query: 522 caagttccttattatgattatgctctcgatctcattttagatattgaatcatctcatggt 581
|| || || |||||||| ||||| || ||||| || ||||| || || || ||| |||||
Sbjct: 754 caggtgccatattatgactatgcacttgatcttatcttagacatcgagtcttctaatggt 695
Query: 582 gatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttatggg 641
||| ||||||||||||| |||||||| | || ||| ||||||||||||| |||||
Sbjct: 694 gatgtgttcactgaggagcaaaatgaattaattgagtcatctgcagagatgctgtatgga 635
Query: 642 ctgatccatgcacgatacattctgaccagtaaaggactggctgcaatgctggagaagtat 701
| || |||||| |||| || | ||||| || || |||||||||||| |||||||||
Sbjct: 634 ttaattcatgcaagatatatcttaaccagcaagggtctggctgcaatgttggagaagttc 575
Query: 702 aagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgcca 761
||||||||||||||||| | ||||| || || ||||| ||||| ||||| || || ||
Sbjct: 574 aagaactatgactttggaagatgcccccgggtatactgttgtggccaaccctgtcttcct 515
Query: 762 gttggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaa 821
| || |||||||| || | | | ||||| || |||||||||||||| || || ||||||
Sbjct: 514 gcagggcaatcagatattcctaggtctagcacagtgaagatatactgtccaaaatgtgaa 455
Query: 822 gacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatactttgggaca 881
|| | | || ||| | |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 454 gatttacattatccaagatccaagtaccaaggcaacattgacggagcgtactttgggaca 395
Query: 882 acgttccctcatctgttcctgatgacata 910
|| ||||| ||||| ||||||||||||||
Sbjct: 394 acattcccacatctcttcctgatgacata 366
>gb|CB649444.1|CB649444 OSJNEb13F22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13F22 3', mRNA sequence
Length = 760
Score = 172 bits (87), Expect = 3e-040
Identities = 120/131 (91%)
Strand = Plus / Minus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||
Sbjct: 412 acatcgacggcgcatactttgggacaacattcccgcacctgtttctgatgacgtacgagc 353
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 352 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 293
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 292 acaagccatga 282
>gb|CB650782.1|CB650782 OSJNEb15G22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15G22 3', mRNA sequence
Length = 768
Score = 172 bits (87), Expect = 3e-040
Identities = 351/439 (79%)
Strand = Plus / Minus
Query: 472 tcgatgatgactacattcaagacgacttcaacctttgtggcctcagcagccaagttcctt 531
|||||||||| || || || || || |||||||||||||| || |||| || || || |
Sbjct: 765 tcgatgatgattatatacaggatgatttcaacctttgtggtctgagcaatcaggtgccat 706
Query: 532 attatgattatgctctcgatctcattttagatattgaatcatctcatggtgatatgttca 591
||||||| ||||| || ||||| || ||||| || || || ||| |||||||| ||||||
Sbjct: 705 attatgactatgcacttgatcttatcttagacatcgagtcttctaatggtgatgtgttca 646
Query: 592 ctgaggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatg 651
||||||| |||||||| | || ||| ||||||||||||| ||||| | || ||||
Sbjct: 645 ctgaggagcaaaatgaattaattgagtcatctgcagagatgctgtatggattaattcatg 586
Query: 652 cacgatacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatg 711
|| |||| || | ||||| || || |||||||||||| ||||||||| ||||||||||
Sbjct: 585 caagatatatcttaaccagcaagggtctggctgcaatgttggagaagttcaagaactatg 526
Query: 712 actttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaat 771
||||||| | ||||| || || ||||| ||||| ||||| || || || | || ||||
Sbjct: 525 actttggaagatgcccccgggtatactgttgtggccaaccctgtcttcctgcagggcaat 466
Query: 772 cagacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctact 831
|||| || | | | ||||| || |||||||||||||| || || |||||||| | | |
Sbjct: 465 cagatattcctaggtctagcacagtgaagatatactgtccaaaatgtgaagatttacatt 406
Query: 832 acccacggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctc 891
| ||| | |||||||||||||||||||| ||||| || |||||||||||||| ||||| |
Sbjct: 405 atccaagatccaagtaccaaggcaacattgacggagcgtactttgggacaacattcccac 346
Query: 892 atctgttcctgatgacata 910
|||| ||||||||||||||
Sbjct: 345 atctcttcctgatgacata 327
>gb|CB654997.1|CB654997 OSJNEc07P17.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07P17 3', mRNA sequence
Length = 814
Score = 172 bits (87), Expect = 3e-040
Identities = 351/439 (79%)
Strand = Plus / Minus
Query: 472 tcgatgatgactacattcaagacgacttcaacctttgtggcctcagcagccaagttcctt 531
|||||||||| || || || || || |||||||||||||| || |||| || || || |
Sbjct: 811 tcgatgatgattatatacaggatgatttcaacctttgtggtctgagcaatcaggtgccat 752
Query: 532 attatgattatgctctcgatctcattttagatattgaatcatctcatggtgatatgttca 591
||||||| ||||| || ||||| || ||||| || || || ||| |||||||| ||||||
Sbjct: 751 attatgactatgcacttgatcttatcttagacatcgagtcttctaatggtgatgtgttca 692
Query: 592 ctgaggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatg 651
||||||| |||||||| | || ||| ||||||||||||| ||||| | || ||||
Sbjct: 691 ctgaggagcaaaatgaattaattgagtcatctgcagagatgctgtatggattaattcatg 632
Query: 652 cacgatacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatg 711
|| |||| || | ||||| || || |||||||||||| ||||||||| ||||||||||
Sbjct: 631 caagatatatcttaaccagcaagggtctggctgcaatgttggagaagttcaagaactatg 572
Query: 712 actttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaat 771
||||||| | ||||| || || ||||| ||||| ||||| || || || | || ||||
Sbjct: 571 actttggaagatgcccccgggtatactgttgtggccaaccctgtcttcctgcagggcaat 512
Query: 772 cagacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctact 831
|||| || | | | ||||| || |||||||||||||| || || |||||||| | | |
Sbjct: 511 cagatattcctaggtctagcacagtgaagatatactgtccaaaatgtgaagatttacatt 452
Query: 832 acccacggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctc 891
| ||| | |||||||||||||||||||| ||||| || |||||||||||||| ||||| |
Sbjct: 451 atccaagatccaagtaccaaggcaacattgacggagcgtactttgggacaacattcccac 392
Query: 892 atctgttcctgatgacata 910
|||| ||||||||||||||
Sbjct: 391 atctcttcctgatgacata 373
>gb|CB656195.1|CB656195 OSJNEc10E04.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10E04 3', mRNA sequence
Length = 818
Score = 172 bits (87), Expect = 3e-040
Identities = 367/459 (79%), Gaps = 1/459 (0%)
Strand = Plus / Minus
Query: 453 aatgagttcttctgtgaagtcgatg-atgactacattcaagacgacttcaacctttgtgg 511
||||||||||||||||| |||||| |||| || || || || || ||||||||||||||
Sbjct: 804 aatgagttcttctgtgagatcgatggatgattatatacaggatgatttcaacctttgtgg 745
Query: 512 cctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaatc 571
|| |||| || || || |||||||| ||||| || ||||| || ||||| || || ||
Sbjct: 744 tctgagcaatcaggtgccatattatgactatgcacttgatcttatcttagacatcgagtc 685
Query: 572 atctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagat 631
||| |||||||| ||||||||||||| |||||||| | || ||| ||||||||||
Sbjct: 684 ttctaatggtgatgtgttcactgaggagcaaaatgaattaattgagtcatctgcagagat 625
Query: 632 gctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatgct 691
||| ||||| | || |||||| |||| || | ||||| || || ||||||||||| |
Sbjct: 624 gctgtatggattaattcatgcaagatatatcttaaccagcaagggtttggctgcaatgtt 565
Query: 692 ggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaacc 751
|||||||| ||||||||||||||||| | ||||| || || ||||| ||||| |||||
Sbjct: 564 ggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaacc 505
Query: 752 atgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccc 811
|| || || | || |||||||| || | | | ||||| || |||||||||||||| ||
Sbjct: 504 ctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtcc 445
Query: 812 caagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcata 871
|| |||||||| | | || ||| | |||||||||||||||||||| ||||| || ||
Sbjct: 444 aaaatgtgaagatttacattatccaagatccaagtaccaaggcaacattgacggagcgta 385
Query: 872 ctttgggacaacgttccctcatctgttcctgatgacata 910
|||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 384 ctttgggacaacattcccacatctcttcctgatgacata 346
>gb|CB649443.1|CB649443 OSJNEb13F22.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13F22 5', mRNA sequence
Length = 725
Score = 165 bits (83), Expect = 8e-038
Identities = 119/131 (90%)
Strand = Plus / Minus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagc 915
|||||||||||||||||||||||||||| ||||| || ||||| ||||||| |||||||
Sbjct: 398 acatcgacggcgcatactttgggacaacattcccgcacctgtttttgatgacgtacgagc 339
Query: 916 acctcaagccacagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctcc 975
|||||||||| ||||| | |||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 338 acctcaagcctcagaaaccctcgcagcgctacgttcctcgtgtatttggattcaagctcc 279
Query: 976 acaagccatga 986
|||||||||||
Sbjct: 278 acaagccatga 268
>gb|CB650781.1|CB650781 OSJNEb15G22.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15G22 5', mRNA sequence
Length = 731
Score = 149 bits (75), Expect = 5e-033
Identities = 303/379 (79%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 342 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 401
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 402 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 461
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 462 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 521
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
| || ||||| || || || ||| |||||||| ||||||||||||| |||||||| |
Sbjct: 522 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaa 581
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
|| ||| ||||||||||||| ||||| | || |||||| |||| || | ||||| |
Sbjct: 582 ttgagtcatctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagca 641
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
| || |||||||||||| ||||||||| ||||||||||||||||| | ||||| || |
Sbjct: 642 agggtctggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccggg 701
Query: 733 tttactgctgtggtcaacc 751
| ||||| ||||| |||||
Sbjct: 702 tatactggtgtggccaacc 720
>gb|CB654996.1|CB654996 OSJNEc07P17.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07P17 5', mRNA sequence
Length = 750
Score = 149 bits (75), Expect = 5e-033
Identities = 303/379 (79%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 328 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 387
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 388 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 447
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 448 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 507
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
| || ||||| || || || ||| |||||||| ||||||||||||| |||||||| |
Sbjct: 508 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaa 567
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
|| ||| ||||||||||||| ||||| | || |||||| |||| || | ||||| |
Sbjct: 568 ttgagtcatctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagca 627
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
| || |||||||||||| ||||||||| ||||||||||||||||| | ||||| || |
Sbjct: 628 agggtctggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccggg 687
Query: 733 tttactgctgtggtcaacc 751
| ||||| ||||| |||||
Sbjct: 688 tatactgttgtggccaacc 706
>gb|CB656194.1|CB656194 OSJNEc10E04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10E04 5', mRNA sequence
Length = 714
Score = 141 bits (71), Expect = 1e-030
Identities = 302/379 (79%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 326 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 385
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 386 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 445
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 446 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 505
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcg 612
| || ||||| || || || ||| |||||||| ||||||||||||| |||||||| |
Sbjct: 506 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatgaattaa 565
Query: 613 gagaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagta 672
|| ||| ||||||||||||| ||||| | || |||||| |||| || | ||||| |
Sbjct: 566 ttgagtcatctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagca 625
Query: 673 aaggactggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtg 732
| || ||||||||||| ||||||||| ||||||||||||||||| | ||||| || |
Sbjct: 626 agggtttggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccggg 685
Query: 733 tttactgctgtggtcaacc 751
| ||||| ||||| |||||
Sbjct: 686 tatactgttgtggccaacc 704
>gb|AU030812.1|AU030812 AU030812 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60280_2Z, mRNA sequence
Length = 645
Score = 137 bits (69), Expect = 2e-029
Identities = 234/289 (80%)
Strand = Plus / Plus
Query: 622 ctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactgg 681
||||||||||||| ||||| | || |||||| |||| || | ||||| || || ||||
Sbjct: 35 ctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagcaagggtctgg 94
Query: 682 ctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgct 741
|||||||| ||||||||| ||||||||||||||||| | ||||| || || ||||| |
Sbjct: 95 ctgcaatgttggagaagttcaagaactatgactttggaagatgcccccgggtatactgtt 154
Query: 742 gtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaaga 801
|||| ||||| || || || | || |||||||| || | | | ||||| || |||||||
Sbjct: 155 gtggccaaccctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaaga 214
Query: 802 tatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcg 861
||||||| || || |||||||| | | || ||| | |||||||||||||||||||| |
Sbjct: 215 tatactgtccaaaatgtgaagatttacattatccaagatccaagtaccaaggcaacattg 274
Query: 862 acggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 275 acggagcgtactttgggacaacattcccacatctcttcctgatgacata 323
>gb|CB000323.1|CB000323 S345U_C12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 663
Score = 129 bits (65), Expect = 4e-027
Identities = 191/233 (81%)
Strand = Plus / Plus
Query: 678 ctggctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttac 737
|||||||||||| ||||||||| ||||||||||||||||| | ||||| || || |||
Sbjct: 80 ctggctgcaatgttggagaagttcaagaactatgactttggaagatgcccccgggtatac 139
Query: 738 tgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtg 797
|| ||||| ||||| || || || | || |||||||| || | | | ||||| || |||
Sbjct: 140 tgttgtggccaaccctgtcttcctgcagggcaatcagatattcctaggtctagcacagtg 199
Query: 798 aagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaac 857
||||||||||| || || |||||||| | | || ||| | ||||||||||||||||||
Sbjct: 200 aagatatactgtccaaaatgtgaagatttacattatccaagatccaagtaccaaggcaac 259
Query: 858 atcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 260 attgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 312
>gb|CB659258.1|CB659258 OSJNEc16B11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16B11 5', mRNA sequence
Length = 625
Score = 121 bits (61), Expect = 1e-024
Identities = 232/289 (80%)
Strand = Plus / Minus
Query: 622 ctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactgg 681
||||||||||||| ||||| | || |||||| |||| || | ||||| || || ||||
Sbjct: 591 ctgcagagatgctgtatggattaattcatgcaagatatatcttaaccagcaagggtctgg 532
Query: 682 ctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgct 741
|||||||| ||||||||| ||||||||||||||||| | ||||| || || ||||| |
Sbjct: 531 ctgcaatgttggagaagttcaagaactatgactttggaagatgcccccgggtatactgtt 472
Query: 742 gtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaaga 801
|||| ||||| || || || | || |||||||| || | | | ||||| || |||||||
Sbjct: 471 gtggccaaccctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaaga 412
Query: 802 tatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcg 861
||||||| || || |||||||| | | || ||| | |||||||||||||||||||| |
Sbjct: 411 tatactgtccaaaatgtgaagatttacattatccaagatccaagtaccaaggcaacattg 352
Query: 862 acggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| || |||||||||||||| ||||| ||| | ||| ||||||||||
Sbjct: 351 acggagcgtactttgggacaacattcccacatttcttcttgatgacata 303
>gb|CB662970.1|CB662970 OSJNEd07H10.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H10 5', mRNA sequence
Length = 740
Score = 117 bits (59), Expect = 2e-023
Identities = 191/235 (81%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 460 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 519
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 520 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 579
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 580 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 639
Query: 553 tcattttagatattgaatcatctcatggtgatatgttcactgaggaacaaaatga 607
| || ||||| || || || ||| |||||||| ||||||||||||| ||||||||
Sbjct: 640 ttatcttagacatcgagtcttctaatggtgatgtgttcactgaggagcaaaatga 694
>gb|CV152500.1|CV152500 LS46-S.SEQ Cold stressed rice cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 357
Score = 113 bits (57), Expect = 3e-022
Identities = 242/303 (79%), Gaps = 1/303 (0%)
Strand = Plus / Plus
Query: 453 aatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgtggc 512
||||||||||||||||| |||||||||| || || || || || ||||||||||||||
Sbjct: 40 aatgagttcttctgtgagatcgatgatgattatatacaggatgatttcaacctttgtggt 99
Query: 513 ctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaatca 572
|| |||| || || || |||||||| ||||| || ||||| || ||||| || || ||
Sbjct: 100 ctgagcaatcaggtgccatattatgactatgcacttgatcttatcttagacatcgagtct 159
Query: 573 tctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatg 632
||| |||||||| ||||||||||||| |||||||| | || ||| |||||||||||
Sbjct: 160 tctaatggtgatgtgttcactgaggagcaaaatgaattaattgagtcatctgcagagatg 219
Query: 633 ctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatgctg 692
|| ||||| | || |||||| |||| || | ||||| || || || ||||||||| ||
Sbjct: 220 ctgtatggattaattcatgcaagatatatcttaaccagcaagggtct-gctgcaatgttg 278
Query: 693 gagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaacca 752
||||||| ||||||||||||||||| | ||||| || || ||||| ||||| |||||
Sbjct: 279 gagaagttcaagaactatgactttggaagatgcccccgggtntactgttgtggccaaccn 338
Query: 753 tgc 755
|||
Sbjct: 339 tgc 341
>gb|AU095208.1|AU095208 AU095208 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60641, mRNA sequence
Length = 478
Score = 97.6 bits (49), Expect = 2e-017
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 786 tctagtaccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaag 845
||||| || |||||||||||||| || || |||||||| | | || ||| | ||||||
Sbjct: 32 tctagcacagtgaagatatactgtccaaaatgtgaagatttacattatccaagatccaag 91
Query: 846 taccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatg 905
|||||||||||||| ||||| || |||||||||||||| ||||| ||||| |||||||||
Sbjct: 92 taccaaggcaacattgacggagcgtactttgggacaacattcccacatctcttcctgatg 151
Query: 906 acata 910
|||||
Sbjct: 152 acata 156
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
sequence
Length = 141307
Score = 85.7 bits (43), Expect = 6e-014
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 107206 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 107265
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 107266 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 107325
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 107326 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 107385
Query: 553 tcattttagatattgaatcatctcatggtga 583
| || ||||| || || || ||| |||||||
Sbjct: 107386 ttatcttagacatcgagtcttctaatggtga 107416
Score = 61.9 bits (31), Expect = 9e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 108564 acattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 108618
Score = 50.1 bits (25), Expect = 0.003
Identities = 106/133 (79%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
||||||||| ||||||||||||||||| | ||||| || || ||||| ||||| ||||
Sbjct: 107879 tggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaac 107938
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| || || || | || |||||||| || | | | ||||| || |||||||||||||| |
Sbjct: 107939 cctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtc 107998
Query: 811 ccaagtgtgaaga 823
| || ||||||||
Sbjct: 107999 caaaatgtgaaga 108011
>gb|AACV01022119.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022119, whole
genome shotgun sequence
Length = 12494
Score = 85.7 bits (43), Expect = 6e-014
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 8089 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 8148
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 8149 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 8208
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 8209 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 8268
Query: 553 tcattttagatattgaatcatctcatggtga 583
| || ||||| || || || ||| |||||||
Sbjct: 8269 ttatcttagacatcgagtcttctaatggtga 8299
Score = 61.9 bits (31), Expect = 9e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 9447 acattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 9501
Score = 50.1 bits (25), Expect = 0.003
Identities = 106/133 (79%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
||||||||| ||||||||||||||||| | ||||| || || ||||| ||||| ||||
Sbjct: 8762 tggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaac 8821
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| || || || | || |||||||| || | | | ||||| || |||||||||||||| |
Sbjct: 8822 cctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtc 8881
Query: 811 ccaagtgtgaaga 823
| || ||||||||
Sbjct: 8882 caaaatgtgaaga 8894
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 85.7 bits (43), Expect = 6e-014
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 3715117 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 3715176
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 3715177 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 3715236
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 3715237 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 3715296
Query: 553 tcattttagatattgaatcatctcatggtga 583
| || ||||| || || || ||| |||||||
Sbjct: 3715297 ttatcttagacatcgagtcttctaatggtga 3715327
Score = 61.9 bits (31), Expect = 9e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 3716475 acattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 3716529
Score = 50.1 bits (25), Expect = 0.003
Identities = 106/133 (79%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
||||||||| ||||||||||||||||| | ||||| || || ||||| ||||| ||||
Sbjct: 3715790 tggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaac 3715849
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| || || || | || |||||||| || | | | ||||| || |||||||||||||| |
Sbjct: 3715850 cctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtc 3715909
Query: 811 ccaagtgtgaaga 823
| || ||||||||
Sbjct: 3715910 caaaatgtgaaga 3715922
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 85.7 bits (43), Expect = 6e-014
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 9765434 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 9765493
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 9765494 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 9765553
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 9765554 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 9765613
Query: 553 tcattttagatattgaatcatctcatggtga 583
| || ||||| || || || ||| |||||||
Sbjct: 9765614 ttatcttagacatcgagtcttctaatggtga 9765644
Score = 61.9 bits (31), Expect = 9e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 9766792 acattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 9766846
Score = 50.1 bits (25), Expect = 0.003
Identities = 106/133 (79%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
||||||||| ||||||||||||||||| | ||||| || || ||||| ||||| ||||
Sbjct: 9766107 tggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaac 9766166
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| || || || | || |||||||| || | | | ||||| || |||||||||||||| |
Sbjct: 9766167 cctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtc 9766226
Query: 811 ccaagtgtgaaga 823
| || ||||||||
Sbjct: 9766227 caaaatgtgaaga 9766239
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 85.7 bits (43), Expect = 6e-014
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 20631228 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 20631287
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 20631288 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 20631347
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 20631348 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 20631407
Query: 553 tcattttagatattgaatcatctcatggtga 583
| || ||||| || || || ||| |||||||
Sbjct: 20631408 ttatcttagacatcgagtcttctaatggtga 20631438
Score = 61.9 bits (31), Expect = 9e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 20632586 acattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 20632640
Score = 50.1 bits (25), Expect = 0.003
Identities = 106/133 (79%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
||||||||| ||||||||||||||||| | ||||| || || ||||| ||||| ||||
Sbjct: 20631901 tggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaac 20631960
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| || || || | || |||||||| || | | | ||||| || |||||||||||||| |
Sbjct: 20631961 cctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtc 20632020
Query: 811 ccaagtgtgaaga 823
| || ||||||||
Sbjct: 20632021 caaaatgtgaaga 20632033
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 85.7 bits (43), Expect = 6e-014
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 21792523 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 21792582
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 21792583 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 21792642
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 21792643 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 21792702
Query: 553 tcattttagatattgaatcatctcatggtga 583
| || ||||| || || || ||| |||||||
Sbjct: 21792703 ttatcttagacatcgagtcttctaatggtga 21792733
Score = 61.9 bits (31), Expect = 9e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 21793881 acattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 21793935
Score = 50.1 bits (25), Expect = 0.003
Identities = 106/133 (79%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
||||||||| ||||||||||||||||| | ||||| || || ||||| ||||| ||||
Sbjct: 21793196 tggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaac 21793255
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| || || || | || |||||||| || | | | ||||| || |||||||||||||| |
Sbjct: 21793256 cctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtc 21793315
Query: 811 ccaagtgtgaaga 823
| || ||||||||
Sbjct: 21793316 caaaatgtgaaga 21793328
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 85.7 bits (43), Expect = 6e-014
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 21804186 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 21804245
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaag 492
||| |||| || | || ||||||||||||||||| |||||||||| || || || |
Sbjct: 21804246 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacagg 21804305
Query: 493 acgacttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatc 552
| || |||||||||||||| || |||| || || || |||||||| ||||| || ||||
Sbjct: 21804306 atgatttcaacctttgtggtctgagcaatcaggtgccatattatgactatgcacttgatc 21804365
Query: 553 tcattttagatattgaatcatctcatggtga 583
| || ||||| || || || ||| |||||||
Sbjct: 21804366 ttatcttagacatcgagtcttctaatggtga 21804396
Score = 61.9 bits (31), Expect = 9e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 856 acatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacata 910
|||| ||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 21805544 acattgacggagcgtactttgggacaacattcccacatctcttcctgatgacata 21805598
Score = 50.1 bits (25), Expect = 0.003
Identities = 106/133 (79%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
||||||||| ||||||||||||||||| | ||||| || || ||||| ||||| ||||
Sbjct: 21804859 tggagaagttcaagaactatgactttggaagatgcccccgggtatactgttgtggccaac 21804918
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| || || || | || |||||||| || | | | ||||| || |||||||||||||| |
Sbjct: 21804919 cctgtcttcctgcagggcaatcagatattcctaggtctagcacagtgaagatatactgtc 21804978
Query: 811 ccaagtgtgaaga 823
| || ||||||||
Sbjct: 21804979 caaaatgtgaaga 21804991
>gb|AU183937.1|AU183937 AU183937 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61557, mRNA sequence
Length = 448
Score = 65.9 bits (33), Expect = 5e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 333 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 392
Query: 433 ggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatga 481
||| |||| || | || ||||||||||||||||| ||||||||||
Sbjct: 393 ggttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatga 441
>gb|AU095209.1|AU095209 AU095209 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60641, mRNA sequence
Length = 473
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 373 ctgatagtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcat 432
|||| ||||||| |||||||| ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 387 ctgacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcat 446
Query: 433 ggt 435
|||
Sbjct: 447 ggt 449
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,309,259
Number of Sequences: 438736
Number of extensions: 2309259
Number of successful extensions: 15775
Number of sequences better than 0.5: 42
Number of HSP's better than 0.5 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15412
Number of HSP's gapped (non-prelim): 324
length of query: 1385
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1364
effective length of database: 2,791,206,460
effective search space: 3807205611440
effective search space used: 3807205611440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)