BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478065.2.2
(688 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK120524.1| Oryza sativa (japonica cultivar-group) cDNA... 460 e-127
gb|CB656199.1|CB656199 OSJNEc10E06.r OSJNEc Oryza sativa (j... 452 e-124
gb|CF329685.1|CF329685 NACL--05-B14.g1 Rice callus plasmid ... 442 e-121
gb|CF332451.1|CF332451 NACL--08-P10.b1 Rice callus plasmid ... 442 e-121
dbj|AK119175.1| Oryza sativa (japonica cultivar-group) cDNA... 442 e-121
ref|XM_483414.1| Oryza sativa (japonica cultivar-group), mRNA 438 e-120
gb|CO435580.1|CO435580 OsMR646 5MT resistant rice mutant cD... 428 e-117
gb|CF339198.1|CF339198 RCL1--04-B18.g1 Regenerated callus l... 426 e-117
gb|CF340229.1|CF340229 RCL1--07-F21.g1 Regenerated callus l... 426 e-117
dbj|AK063752.1| Oryza sativa (japonica cultivar-group) cDNA... 426 e-117
dbj|AK099282.1| Oryza sativa (japonica cultivar-group) cDNA... 426 e-117
gb|AU065336.1|AU065336 AU065336 Rice cDNA from immature lea... 406 e-111
gb|AU092669.1|AU092669 AU092669 Rice callus Oryza sativa (j... 406 e-111
gb|CF315366.1|CF315366 HD--04-E05.b1 OsHDAC1-overexpressing... 406 e-111
gb|CF315473.1|CF315473 HD--04-G14.b1 OsHDAC1-overexpressing... 406 e-111
gb|CF327396.1|CF327396 NACL--01-N21.b1 Rice callus plasmid ... 406 e-111
gb|AU092594.1|AU092594 AU092594 Rice callus Oryza sativa (j... 404 e-110
gb|C24949.1|C24949 C24949 Rice green shoot Oryza sativa (ja... 398 e-108
gb|C25268.1|C25268 C25268 Rice shoot Oryza sativa (japonica... 387 e-105
gb|AU164756.1|AU164756 AU164756 Rice cDNA from immature lea... 369 1e-099
gb|CF332452.1|CF332452 NACL--08-P10.g1 Rice callus plasmid ... 357 5e-096
gb|D15957.2|D15957 RICC1675A Rice callus Oryza sativa (japo... 355 2e-095
gb|D23101.1|D23101 RICC2194A Rice callus Oryza sativa (japo... 353 8e-095
gb|CF331162.1|CF331162 NACL--07-C19.g1 Rice callus plasmid ... 353 8e-095
gb|C27659.1|C27659 C27659 Rice callus cDNA Oryza sativa (ja... 351 3e-094
gb|C74213.1|C74213 C74213 Rice panicle shorter than 3cm Ory... 347 5e-093
gb|AU164951.1|AU164951 AU164951 Rice cDNA from immature lea... 345 2e-092
gb|C74957.1|C74957 C74957 Rice cDNA from immature leaf incl... 339 1e-090
gb|C27466.1|C27466 C27466 Rice callus cDNA Oryza sativa (ja... 337 5e-090
gb|D15873.1|D15873 RICC1449A Rice callus Oryza sativa (japo... 337 5e-090
gb|CV733382.1|CV733382 FLO--08-E10.g1 Rice flower lambda ph... 323 7e-086
gb|CF315474.1|CF315474 HD--04-G14.g1 OsHDAC1-overexpressing... 319 1e-084
gb|CF331585.1|CF331585 NACL--07-M09.b1 Rice callus plasmid ... 311 3e-082
gb|CF331586.1|CF331586 NACL--07-M09.g1 Rice callus plasmid ... 311 3e-082
gb|D24666.1|D24666 RICR2341A Rice root Oryza sativa (japoni... 307 4e-081
gb|AU031182.1|AU031182 AU031182 Rice cDNA from immature lea... 303 7e-080
gb|CF315367.1|CF315367 HD--04-E05.g1 OsHDAC1-overexpressing... 303 7e-080
gb|CX728710.1|CX728710 OSJNEf11I21.r OSJNEf Oryza sativa (j... 301 3e-079
gb|CB000315.1|CB000315 S345U_E09 Rice cold stress germinati... 291 3e-076
gb|C27421.1|C27421 C27421 Rice callus cDNA Oryza sativa (ja... 289 1e-075
gb|CB683771.1|CB683771 OSJNEf12J22.f OSJNEf Oryza sativa (j... 281 2e-073
gb|C27768.1|C27768 C27768 Rice callus cDNA Oryza sativa (ja... 280 1e-072
gb|C74132.1|C74132 C74132 Rice panicle shorter than 3cm Ory... 268 4e-069
gb|AU184450.1|AU184450 AU184450 Rice root Oryza sativa (jap... 268 4e-069
gb|AQ329713.1|AQ329713 nbxb0045J15f CUGI Rice BAC Library O... 264 6e-068
dbj|AP003888.4| Oryza sativa (japonica cultivar-group) geno... 264 6e-068
gb|AACV01018885.1| Oryza sativa (japonica cultivar-group) c... 264 6e-068
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 264 6e-068
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 264 6e-068
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 264 6e-068
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 264 6e-068
gb|AU172775.1|AU172775 AU172775 Rice panicle shorter than 3... 260 9e-067
gb|AC108763.2| Oryza sativa (japonica cultivar-group) chrom... 250 9e-064
gb|AACV01020343.1| Oryza sativa (japonica cultivar-group) c... 250 9e-064
gb|AC099404.2| Oryza sativa (japonica cultivar-group) chrom... 250 9e-064
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 250 9e-064
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 250 9e-064
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 250 9e-064
gb|AQ329220.1|AQ329220 nbxb0044J07f CUGI Rice BAC Library O... 242 2e-061
gb|AQ363872.2|AQ363872 nbxb0060G23f CUGI Rice BAC Library O... 242 2e-061
gb|AQ256837.1|AQ256837 nbxb0016N20r CUGI Rice BAC Library O... 236 1e-059
gb|AU062672.2|AU062672 AU062672 Rice callus Oryza sativa (j... 226 1e-056
gb|C98358.1|C98358 C98358 Rice callus Oryza sativa (japonic... 208 3e-051
gb|CF329684.1|CF329684 NACL--05-B14.b1 Rice callus plasmid ... 192 2e-046
gb|AU164952.1|AU164952 AU164952 Rice cDNA from immature lea... 186 1e-044
gb|CF299450.1|CF299450 7LEAF--03-H17.b1 Rice leaf plasmid c... 168 3e-039
gb|AU071090.1|AU071090 AU071090 Rice cDNA from young root O... 159 2e-036
gb|AU068617.1|AU068617 AU068617 Rice callus Oryza sativa (j... 129 2e-027
gb|AU225544.1|AU225544 AU225544 Oryza sativa Koshihikari pi... 123 1e-025
gb|AU029460.1|AU029460 AU029460 Rice panicle shorter than 3... 121 5e-025
gb|D22873.1|D22873 RICC1675B Rice callus Oryza sativa (japo... 115 3e-023
gb|AU108903.1|AU108903 AU108903 Rice callus Oryza sativa (j... 86 3e-014
gb|AQ258131.1|AQ258131 nbxb0019D02f CUGI Rice BAC Library O... 76 3e-011
gb|AU160845.1|AU160845 AU160845 Rice callus Oryza sativa (j... 50 0.002
gb|AU096840.1|AU096840 AU096840 Rice green shoot Oryza sati... 46 0.025
gb|AACV01026337.1| Oryza sativa (japonica cultivar-group) C... 44 0.098
gb|CH401480.1| Oryza sativa (japonica cultivar-group) scaff... 44 0.098
>dbj|AK120524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126M04, full
insert sequence
Length = 657
Score = 460 bits (232), Expect = e-127
Identities = 367/412 (89%)
Strand = Plus / Plus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||||||| || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 21 gaagatggcggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 80
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 81 gaggccgcacagcgaccgctacatcggcctcaagacaagctggcgcaggccaaagggtat 140
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
|||||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 141 cgactcccgtgtcaggagaaagttcaagggatgcactttgatgcctaatattggctatgg 200
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|||||||||||||| ||||| || ||||||||||| || |||||||||||||| |||||
Sbjct: 201 ttctgacaagaagacgaggcattaccttcccaacaaattcaagaagtttgtcgtccacaa 260
Query: 363 tgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcaca 422
||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 261 tgtctctgagctggagttacttatgatgcacaacaggacatactgtgctgagatcgctca 320
Query: 423 caacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
||| || || || |||||||||||||| ||||||||||| ||||| |||||||| || ||
Sbjct: 321 caatgtctcaacgaagaagcgcaaggagatcgtggagcgtgctgcacagcttgatatcgt 380
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagtaaactgtt 534
||||||||| ||||||||| | || ||||||||||| || ||||||| ||||
Sbjct: 381 ggtcaccaacaagcttgccaggcttcgcagccaggaggacgagtaaattgtt 432
>gb|CB656199.1|CB656199 OSJNEc10E06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10E06 3', mRNA sequence
Length = 770
Score = 452 bits (228), Expect = e-124
Identities = 366/412 (88%)
Strand = Plus / Minus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||||||| || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 627 gaagatggcggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 568
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| || ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 567 gaggccgtacagcgaccgctacatcggcctcaagacaagctggcgcaggccaaagggtat 508
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
|||||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 507 cgactcccgtgtcaggagaaagttcaagggatgcactttgatgcctaatattggctatgg 448
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|||||||||||||| ||||| || ||||||||||| || |||||||||||||| |||||
Sbjct: 447 ttctgacaagaagacgaggcattaccttcccaacaaattcaagaagtttgtcgtccacaa 388
Query: 363 tgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcaca 422
||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 387 tgtctctgagctggagttacttatgatgcacaacaggacatactgtgctgagatcgctca 328
Query: 423 caacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
||| || || || |||||||||||||| ||||||||||| ||||| |||||||| || ||
Sbjct: 327 caatgtctcaacgaagaagcgcaaggagatcgtggagcgtgctgcacagcttgatatcgt 268
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagtaaactgtt 534
||||||||| ||||||||| | || ||||||||||| || ||||||| ||||
Sbjct: 267 ggtcaccaacaagcttgccaggcttcgcagccaggaggacgagtaaattgtt 216
>gb|CF329685.1|CF329685 NACL--05-B14.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--05-B14, mRNA sequence
Length = 483
Score = 442 bits (223), Expect = e-121
Identities = 358/403 (88%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 61 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 120
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 121 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 180
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 181 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 240
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 241 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 300
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 301 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 360
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtgg 484
|||| || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||
Sbjct: 361 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 420
Query: 485 tcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 421 tcaccaacaagcttgcaaggctccgtagccaggaggacgagta 463
>gb|CF332451.1|CF332451 NACL--08-P10.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-P10, mRNA sequence
Length = 505
Score = 442 bits (223), Expect = e-121
Identities = 358/403 (88%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 62 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 121
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 122 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 181
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 182 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 241
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 242 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 301
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 302 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 361
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtgg 484
|||| || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||
Sbjct: 362 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 421
Query: 485 tcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 422 tcaccaacaagcttgcaaggctccgtagccaggaggacgagta 464
>dbj|AK119175.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F05, full
insert sequence
Length = 967
Score = 442 bits (223), Expect = e-121
Identities = 358/403 (88%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 405 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 464
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 465 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 524
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 525 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 584
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 585 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 644
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 645 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 704
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtgg 484
|||| || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||
Sbjct: 705 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 764
Query: 485 tcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 765 tcaccaacaagcttgcaaggctccgtagccaggaggacgagta 807
>ref|XM_483414.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 402
Score = 438 bits (221), Expect = e-120
Identities = 356/401 (88%)
Strand = Plus / Plus
Query: 127 atggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaagagg 186
||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 atggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaagagg 60
Query: 187 ccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcgac 246
||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 ccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattgac 120
Query: 247 tcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggctct 306
|||||||||||| | |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 121 tcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggctca 180
Query: 307 gacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtt 366
|||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 181 gacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatgtc 240
Query: 367 tctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacacaac 426
||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||||
Sbjct: 241 tctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccacaac 300
Query: 427 gtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtc 486
|| || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||
Sbjct: 301 gtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtggtc 360
Query: 487 accaataagcttgcccgtctccgcagccaggaagatgagta 527
||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 361 accaacaagcttgcaaggctccgtagccaggaggacgagta 401
>gb|CO435580.1|CO435580 OsMR646 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 919
Score = 428 bits (216), Expect = e-117
Identities = 356/403 (88%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
|||||||| |||| ||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 108 agatggcgntgcccctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 167
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 168 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 227
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 228 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 287
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 288 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 347
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 348 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 407
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtgg 484
|||| || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||
Sbjct: 408 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 467
Query: 485 tcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 468 tcaccaacaagcttgcaaggctccgtagccaggaggacgagta 510
>gb|CF339198.1|CF339198 RCL1--04-B18.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--04-B18, mRNA sequence
Length = 651
Score = 426 bits (215), Expect = e-117
Identities = 350/395 (88%)
Strand = Plus / Plus
Query: 124 aagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaag 183
||||||| ||||||| || |||| |||||||||||||||||||||| ||||||||||||
Sbjct: 54 aagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 113
Query: 184 aggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatc 243
||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 114 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtatt 173
Query: 244 gactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggc 303
||||| ||||||||| | |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 174 gactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggt 233
Query: 304 tctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaat 363
|||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 234 tctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaat 293
Query: 364 gtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacac 423
|| |||||||||||| |||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 294 gtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgctcac 353
Query: 424 aacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtg 483
||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 354 aacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatcgtg 413
Query: 484 gtcaccaataagcttgcccgtctccgcagccagga 518
|||||||| ||||||||| | ||||||||||||||
Sbjct: 414 gtcaccaacaagcttgccaggctccgcagccagga 448
>gb|CF340229.1|CF340229 RCL1--07-F21.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--07-F21, mRNA sequence
Length = 459
Score = 426 bits (215), Expect = e-117
Identities = 350/395 (88%)
Strand = Plus / Plus
Query: 124 aagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaag 183
||||||| ||||||| || |||| |||||||||||||||||||||| ||||||||||||
Sbjct: 54 aagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 113
Query: 184 aggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatc 243
||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 114 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtatt 173
Query: 244 gactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggc 303
||||| ||||||||| | |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 174 gactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggt 233
Query: 304 tctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaat 363
|||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 234 tctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaat 293
Query: 364 gtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacac 423
|| |||||||||||| |||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 294 gtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgctcac 353
Query: 424 aacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtg 483
||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 354 aacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatcgtg 413
Query: 484 gtcaccaataagcttgcccgtctccgcagccagga 518
|||||||| ||||||||| | ||||||||||||||
Sbjct: 414 gtcaccaacaagcttgccaggctccgcagccagga 448
>dbj|AK063752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A02, full
insert sequence
Length = 750
Score = 426 bits (215), Expect = e-117
Identities = 350/395 (88%)
Strand = Plus / Plus
Query: 124 aagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaag 183
||||||| ||||||| || |||| |||||||||||||||||||||| ||||||||||||
Sbjct: 53 aagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 112
Query: 184 aggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatc 243
||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 113 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtatt 172
Query: 244 gactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggc 303
||||| ||||||||| | |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 173 gactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggt 232
Query: 304 tctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaat 363
|||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 233 tctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaat 292
Query: 364 gtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacac 423
|| |||||||||||| |||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 293 gtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgctcac 352
Query: 424 aacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtg 483
||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 353 aacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatcgtg 412
Query: 484 gtcaccaataagcttgcccgtctccgcagccagga 518
|||||||| ||||||||| | ||||||||||||||
Sbjct: 413 gtcaccaacaagcttgccaggctccgcagccagga 447
>dbj|AK099282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130H04, full
insert sequence
Length = 745
Score = 426 bits (215), Expect = e-117
Identities = 350/395 (88%)
Strand = Plus / Plus
Query: 124 aagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaag 183
||||||| ||||||| || |||| |||||||||||||||||||||| ||||||||||||
Sbjct: 54 aagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 113
Query: 184 aggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatc 243
||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 114 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtatt 173
Query: 244 gactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggc 303
||||| ||||||||| | |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 174 gactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggt 233
Query: 304 tctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaat 363
|||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 234 tctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaat 293
Query: 364 gtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacac 423
|| |||||||||||| |||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 294 gtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgctcac 353
Query: 424 aacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtg 483
||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 354 aacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatcgtg 413
Query: 484 gtcaccaataagcttgcccgtctccgcagccagga 518
|||||||| ||||||||| | ||||||||||||||
Sbjct: 414 gtcaccaacaagcttgccaggctccgcagccagga 448
>gb|AU065336.1|AU065336 AU065336 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61860_1A, mRNA sequence
Length = 485
Score = 406 bits (205), Expect = e-111
Identities = 357/405 (88%), Gaps = 2/405 (0%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 38 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 97
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 98 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 157
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 158 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 217
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 218 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 277
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 278 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 337
Query: 425 acgtgtc-cactaagaagcgcaaggaaatcgtggagcgagctgctcagct-tgacattgt 482
|||| || || |||||||||||||| ||||| ||||| ||||| ||| | ||||| ||
Sbjct: 338 acgtctcttacgaagaagcgcaaggagatcgttgagcgtgctgcgcagttcggacatcgt 397
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 398 ggtcaccaacaagcttgcaaggctccgtagccaggaggacgagta 442
>gb|AU092669.1|AU092669 AU092669 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52822, mRNA sequence
Length = 647
Score = 406 bits (205), Expect = e-111
Identities = 355/405 (87%)
Strand = Plus / Plus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||| || || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 46 gaagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 105
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| ||| ||||||||||| |||||||| ||||||||||||| || ||||||||
Sbjct: 106 gaggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtat 165
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
||||| ||||||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 166 tgactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatgg 225
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|| ||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 226 ttcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaa 285
Query: 363 tgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcaca 422
|| || ||||||||| ||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 286 cgtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctca 345
Query: 423 caacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
|| |||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 346 taatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgt 405
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
|||||||| ||||||||| | || ||||||||||| ||||||||
Sbjct: 406 cgtcaccaacaagcttgccaggctacgcagccaggaggatgagta 450
>gb|CF315366.1|CF315366 HD--04-E05.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-E05, mRNA sequence
Length = 635
Score = 406 bits (205), Expect = e-111
Identities = 355/405 (87%)
Strand = Plus / Plus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||| || || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 50 gaagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 109
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| ||| ||||||||||| |||||||| ||||||||||||| || ||||||||
Sbjct: 110 gaggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtat 169
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
||||| ||||||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 170 tgactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatgg 229
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|| ||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 230 ttcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaa 289
Query: 363 tgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcaca 422
|| || ||||||||| ||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 290 cgtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctca 349
Query: 423 caacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
|| |||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 350 taatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgt 409
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
|||||||| ||||||||| | || ||||||||||| ||||||||
Sbjct: 410 cgtcaccaacaagcttgccaggctacgcagccaggaggatgagta 454
>gb|CF315473.1|CF315473 HD--04-G14.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-G14, mRNA sequence
Length = 578
Score = 406 bits (205), Expect = e-111
Identities = 355/405 (87%)
Strand = Plus / Plus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||| || || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 47 gaagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 106
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| ||| ||||||||||| |||||||| ||||||||||||| || ||||||||
Sbjct: 107 gaggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtat 166
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
||||| ||||||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 167 tgactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatgg 226
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|| ||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 227 ttcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaa 286
Query: 363 tgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcaca 422
|| || ||||||||| ||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 287 cgtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctca 346
Query: 423 caacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
|| |||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 347 taatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgt 406
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
|||||||| ||||||||| | || ||||||||||| ||||||||
Sbjct: 407 cgtcaccaacaagcttgccaggctacgcagccaggaggatgagta 451
>gb|CF327396.1|CF327396 NACL--01-N21.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--01-N21, mRNA sequence
Length = 633
Score = 406 bits (205), Expect = e-111
Identities = 355/405 (87%)
Strand = Plus / Plus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||| || || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 46 gaagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 105
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| ||| ||||||||||| |||||||| ||||||||||||| || ||||||||
Sbjct: 106 gaggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtat 165
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
||||| ||||||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 166 tgactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatgg 225
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|| ||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 226 ttcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaa 285
Query: 363 tgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcaca 422
|| || ||||||||| ||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 286 cgtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctca 345
Query: 423 caacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgt 482
|| |||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 346 taatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgt 405
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
|||||||| ||||||||| | || ||||||||||| ||||||||
Sbjct: 406 cgtcaccaacaagcttgccaggctacgcagccaggaggatgagta 450
>gb|AU092594.1|AU092594 AU092594 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52521, mRNA sequence
Length = 630
Score = 404 bits (204), Expect = e-110
Identities = 355/403 (88%), Gaps = 2/403 (0%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 29 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 88
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 89 ggccccatagtgaccgctacctatgcctcaagccaag-tggcgcaggcccaagggtattg 147
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 148 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 207
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 208 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 267
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 268 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 327
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtgg 484
|||| || || |||||||||||||| ||||| ||||| ||| ||||| ||||| ||||
Sbjct: 328 acgtctctacgaagaagcgcaaggagatcgttgagcg-tntgcgcagctcgacatcgtgg 386
Query: 485 tcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 387 tcaccaacaagcttgcaaggctccgtagccaggaggacgagta 429
>gb|C24949.1|C24949 C24949 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S16261_2A, mRNA sequence
Length = 458
Score = 398 bits (201), Expect = e-108
Identities = 356/405 (87%), Gaps = 2/405 (0%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 31 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 90
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 91 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 150
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 151 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 210
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 211 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 270
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 271 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 330
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcgagc-tgctcag-cttgacattgt 482
|||| || || |||||||||||||| ||||| |||| || ||| ||| | ||||| ||
Sbjct: 331 acgtctctacgaagaagcgcaaggagatcgttgagcctgcttgcgcagtccggacatcgt 390
Query: 483 ggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 391 ggtcaccaacaagcttgcaaggctccgtagccaggaggacgagta 435
>gb|C25268.1|C25268 C25268 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5743_1A, mRNA sequence
Length = 405
Score = 387 bits (195), Expect = e-105
Identities = 297/331 (89%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 51 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 110
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 111 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 170
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 171 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 230
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 231 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 290
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 291 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 350
Query: 425 acgtgtccactaagaagcgcaaggaaatcgt 455
|||| || || | |||||||||||| |||||
Sbjct: 351 acgtctctacgaggaagcgcaaggagatcgt 381
>gb|AU164756.1|AU164756 AU164756 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61114, mRNA sequence
Length = 405
Score = 369 bits (186), Expect = 1e-099
Identities = 261/286 (91%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 48 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 107
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 108 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 167
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 168 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 227
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 228 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 287
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgc 410
| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 288 tctctgagctggagttgctcatgatgcacaacaggacctactgtgc 333
>gb|CF332452.1|CF332452 NACL--08-P10.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-P10, mRNA sequence
Length = 553
Score = 357 bits (180), Expect = 5e-096
Identities = 285/320 (89%)
Strand = Plus / Minus
Query: 208 tgcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttc 267
||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 553 tgcctcaagccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttc 494
Query: 268 aagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactat 327
|||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||
Sbjct: 493 aagggatgcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactac 434
Query: 328 cttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatg 387
|| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 433 ctccccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatg 374
Query: 388 atgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaag 447
|||||||||||||| |||||||| || || || |||||||| | || ||||||||||||
Sbjct: 373 atgcacaacaggacctactgtgccgagattgcccacaacgtctttacgaagaagcgcaag 314
Query: 448 gaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctc 507
|| ||||| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | |||
Sbjct: 313 gagatcgttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctc 254
Query: 508 cgcagccaggaagatgagta 527
|| |||||||| || |||||
Sbjct: 253 cgtagccaggaggacgagta 234
>gb|D15957.2|D15957 RICC1675A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1675A, mRNA sequence
Length = 359
Score = 355 bits (179), Expect = 2e-095
Identities = 256/282 (90%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 44 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 103
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 104 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 163
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 164 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 223
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||| ||||||| ||||||||||
Sbjct: 224 cagacaagaagaccaggcactacctccccaacaagttcaagnagtttgtggtgcacaatg 283
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatact 406
| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 284 tctctgagctggagttgctcatgatgcacaacaggacctact 325
>gb|D23101.1|D23101 RICC2194A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2194_1A, mRNA sequence
Length = 328
Score = 353 bits (178), Expect = 8e-095
Identities = 262/290 (90%)
Strand = Plus / Plus
Query: 124 aagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaag 183
||||||| ||||||| || |||| |||||||||||||||||||||| ||||||||||||
Sbjct: 37 aagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 96
Query: 184 aggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatc 243
||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 97 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtatt 156
Query: 244 gactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggc 303
||||| ||||||||| | |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 157 gactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggt 216
Query: 304 tctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaat 363
|||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 217 tctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaat 276
Query: 364 gtttctgagctggagttgcttatgatgcacaacaggacatactgtgctga 413
|| |||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 277 gtctctgagctggagctgcttatgatgcacaacaggacatactgcgctga 326
>gb|CF331162.1|CF331162 NACL--07-C19.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-C19, mRNA sequence
Length = 523
Score = 353 bits (178), Expect = 8e-095
Identities = 277/310 (89%)
Strand = Plus / Plus
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
|||||||| |||||||||||||||| |||||||| ||||| ||||||||| | |||||||
Sbjct: 27 gcctcaagacaagctggcgcaggccaaagggtattgactctcgtgtcaggagaaagttca 86
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |
Sbjct: 87 aaggatgcaccttgatgcccaacattggatatggttctgacaagaagacaaggcactacc 146
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||
Sbjct: 147 ttcccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagctgcttatga 206
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaagg 448
||||||||||||||||||| ||||| || || |||||||| ||||| ||||||||||
Sbjct: 207 tgcacaacaggacatactgcgctgagattgctcacaacgtctccacccgcaagcgcaagg 266
Query: 449 aaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctcc 508
| ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||||||| | ||||
Sbjct: 267 agatcgtcgagcgcgctgcgcagctggacatcgtggtcaccaacaagcttgccaggctcc 326
Query: 509 gcagccagga 518
||||||||||
Sbjct: 327 gcagccagga 336
>gb|C27659.1|C27659 C27659 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52521_2A, mRNA sequence
Length = 395
Score = 351 bits (177), Expect = 3e-094
Identities = 297/337 (88%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
|||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 30 agatggcggtgc-gctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 88
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||| |||||||||||||||| | |||||||||| |
Sbjct: 89 ggccccatagtgaccgctacctatgcctnaagccaagctggcgcaaggccaagggtattg 148
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 149 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 208
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||
Sbjct: 209 cagacaagaagaccaggcactacctccccaacaagttcaagangtttgtngtgcacaatg 268
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| ||||||||||||||||| ||||||||||||||||| |||||| | || || || ||||
Sbjct: 269 tctctgagctggagttgctcatgatgcacaacaggacctactgtnccgagattgcccaca 328
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcg 461
|||| || || |||||||||||||| ||||| |||||
Sbjct: 329 acgtctctacgaagaagcgcaaggagatcgttgagcg 365
>gb|C74213.1|C74213 C74213 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30658_1A, mRNA sequence
Length = 403
Score = 347 bits (175), Expect = 5e-093
Identities = 259/287 (90%)
Strand = Plus / Plus
Query: 127 atggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaagagg 186
|||| ||||||| || |||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 49 atggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaagagg 108
Query: 187 ccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcgac 246
|| ||| ||||||||||| |||||||| |||||||||||||||| |||||||| |||
Sbjct: 109 ccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtattgac 168
Query: 247 tcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggctct 306
|| ||||||||| | |||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 169 tctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggttct 228
Query: 307 gacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtt 366
||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 229 gacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaatgtc 288
Query: 367 tctgagctggagttgcttatgatgcacaacaggacatactgtgctga 413
|||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 289 tctgagctggagctgcttatgatgcacaacaggacatactgcgctga 335
>gb|AU164951.1|AU164951 AU164951 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61866, mRNA sequence
Length = 455
Score = 345 bits (174), Expect = 2e-092
Identities = 331/381 (86%), Gaps = 3/381 (0%)
Strand = Plus / Plus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||| || || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 75 gaagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 134
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| ||| ||||||||||| |||||||| ||||||||||||| || ||||||||
Sbjct: 135 gaggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtat 194
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
||||| ||||||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 195 tgactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatgg 254
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|| ||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 255 ttcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaa 314
Query: 363 tgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcaca 422
|| || ||||||||| ||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 315 cgtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctca 374
Query: 423 caacgtgtccactaagaagcgcaaggaaa--tcgtggagcgagctgctcagc-ttgacat 479
|| |||||||| ||||| ||||||| | | |||||||| |||||||||| |||||||
Sbjct: 375 taatgtgtccacgaagaaacgcaagggagattagtggagcgcgctgctcagctttgacat 434
Query: 480 tgtggtcaccaataagcttgc 500
||| |||||||| ||||||||
Sbjct: 435 tgtcgtcaccaacaagcttgc 455
>gb|C74957.1|C74957 C74957 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E61191_1A,
mRNA sequence
Length = 330
Score = 339 bits (171), Expect = 1e-090
Identities = 250/275 (90%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 56 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 115
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 116 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 175
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 176 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 235
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 236 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 295
Query: 365 tttctgagctggagttgct-tatgatgcacaacag 398
| ||||||||||||||||| ||||||||||||||
Sbjct: 296 tctctgagctggagttgctccatgatgcacaacag 330
>gb|C27466.1|C27466 C27466 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51946_1A, mRNA sequence
Length = 318
Score = 337 bits (170), Expect = 5e-090
Identities = 248/275 (90%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 39 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 98
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 99 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 158
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 159 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 218
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| ||||||||| |||||||||| || ||||||||||| ||||||||||| ||||||| ||
Sbjct: 219 cagacaagaagnccaggcactacctccccaacaagttcaagaagtttgtggtgcacantg 278
Query: 365 tttctgagctggagttgcttatgatgcacaacagg 399
| ||||||||| ||||||| |||||||||||||||
Sbjct: 279 tctctgagctgnagttgctcatgatgcacaacagg 313
>gb|D15873.1|D15873 RICC1449A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1449A, mRNA sequence
Length = 354
Score = 337 bits (170), Expect = 5e-090
Identities = 255/284 (89%)
Strand = Plus / Plus
Query: 124 aagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaag 183
||||||| || |||| || |||| |||||||||||||||||||||| ||||||||||||
Sbjct: 40 aagatggtggngccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 99
Query: 184 aggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatc 243
||| | ||| ||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 100 aggncgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtatt 159
Query: 244 gactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggc 303
||||| ||||||||| | |||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 160 gactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggt 219
Query: 304 tctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaat 363
|||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 220 tctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaat 279
Query: 364 gtttctgagctggagttgcttatgatgcacaacaggacatactg 407
|| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 280 gtctctgagctggagctgcttatgatgcacaacaggacatactg 323
>gb|CV733382.1|CV733382 FLO--08-E10.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-E10,
mRNA sequence
Length = 491
Score = 323 bits (163), Expect = 7e-086
Identities = 268/303 (88%)
Strand = Plus / Minus
Query: 225 gcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagggatgcaccttgat 284
|||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||
Sbjct: 491 gcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgat 432
Query: 285 gcctaacattggatatggctctgacaagaagaccaggcactatcttcccaacaagtttaa 344
||| |||||||| || ||||| |||||||||||||||||||| || ||||||||||| ||
Sbjct: 431 gcccaacattggttacggctcagacaagaagaccaggcactacctccccaacaagttcaa 372
Query: 345 gaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcacaacaggacata 404
||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||| ||
Sbjct: 371 gaagtttgtggtgcacaatgtctttgagctggagttgctcatgatgcacaacaggaccta 312
Query: 405 ctgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatcgtggagcgagc 464
|||||| || || || |||||||| || || |||||||||||||| ||||| ||||| ||
Sbjct: 311 ctgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcgtgc 252
Query: 465 tgctcagcttgacattgtggtcaccaataagcttgcccgtctccgcagccaggaagatga 524
||| ||||| ||||| ||||||||||| |||||||| | ||||| |||||||| || ||
Sbjct: 251 tgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacga 192
Query: 525 gta 527
|||
Sbjct: 191 gta 189
>gb|CF315474.1|CF315474 HD--04-G14.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-G14, mRNA sequence
Length = 513
Score = 319 bits (161), Expect = 1e-084
Identities = 279/317 (88%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||||||||||||| || |||||||| ||||| ||||||||| ||||||||||||
Sbjct: 513 tcaagacaagctggcgcagaccaaagggtattgactcacgtgtcaggaggaagttcaagg 454
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| |||||||| || ||||||||||| || ||||||||||||||||| || || |
Sbjct: 453 gatgcacattgatgcccaatattggatatggttcggacaagaagaccaggcattacctgc 394
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
|||||||||| ||||||||||| |||||||| || || ||||||||| ||||||||||||
Sbjct: 393 ccaacaagttcaagaagtttgtggtgcacaacgtctcagagctggagctgcttatgatgc 334
Query: 392 acaacagg-acatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaa 450
|||||||| | |||||||||||||| || || || |||||||| ||||| ||||||||
Sbjct: 333 acaacaggnatgtactgtgctgaaattgctcataatgtgtccacgaagaaacgcaaggag 274
Query: 451 atcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgc 510
|| |||||||| |||||||||||||||||||| |||||||| ||||||||| | || |||
Sbjct: 273 atagtggagcgcgctgctcagcttgacattgtcgtcaccaacaagcttgccaggctacgc 214
Query: 511 agccaggaagatgagta 527
|||||||| ||||||||
Sbjct: 213 agccaggaggatgagta 197
>gb|CF331585.1|CF331585 NACL--07-M09.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-M09, mRNA sequence
Length = 480
Score = 311 bits (157), Expect = 3e-082
Identities = 259/293 (88%)
Strand = Plus / Plus
Query: 235 aagggtatcgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacatt 294
|||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 1 aagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacatt 60
Query: 295 ggatatggctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtc 354
|| || ||||| |||||||||||||||||||| || ||||||||||| |||||||||||
Sbjct: 61 ggttacggctcagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtg 120
Query: 355 gtgcacaatgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaa 414
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 121 gtgcacaatgtctctgagctggagttgctcatgatgcacaacaggacctactgtgccgag 180
Query: 415 atcgcacacaacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagctt 474
|| || |||||||| || || |||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 181 attgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctc 240
Query: 475 gacattgtggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||| ||||||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 241 gacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacgagta 293
>gb|CF331586.1|CF331586 NACL--07-M09.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-M09, mRNA sequence
Length = 480
Score = 311 bits (157), Expect = 3e-082
Identities = 259/293 (88%)
Strand = Plus / Minus
Query: 235 aagggtatcgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacatt 294
|||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 480 aagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacatt 421
Query: 295 ggatatggctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtc 354
|| || ||||| |||||||||||||||||||| || ||||||||||| |||||||||||
Sbjct: 420 ggttacggctcagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtg 361
Query: 355 gtgcacaatgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaa 414
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 360 gtgcacaatgtctctgagctggagttgctcatgatgcacaacaggacctactgtgccgag 301
Query: 415 atcgcacacaacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagctt 474
|| || |||||||| || || |||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 300 attgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctc 241
Query: 475 gacattgtggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||| ||||||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 240 gacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacgagta 188
>gb|D24666.1|D24666 RICR2341A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2341_1A, mRNA sequence
Length = 332
Score = 307 bits (155), Expect = 4e-081
Identities = 242/273 (88%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 50 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 109
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 110 ggccccatagtgaccgntacctatgcctcaagccaagctggcgnaggcccaagggtattn 169
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | ||||||||||| |||||||||||||| |||||| | || ||||
Sbjct: 170 actcccgtgtcaggagaaagttcaagggntgcaccttgatgcccaacattngttacggct 229
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| ||||||||||||||| |||| || ||||||||||| ||||||||||| ||||||||||
Sbjct: 230 cagacaagaagaccaggnactacctccccaacaagttcaagaagtttgtggtgcacaatg 289
Query: 365 tttctgagctggagttgcttatgatgcacaaca 397
| ||| ||||||||||||| |||||||||||||
Sbjct: 290 tctcttagctggagttgctcatgatgcacaaca 322
>gb|AU031182.1|AU031182 AU031182 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61114_2Z, mRNA sequence
Length = 474
Score = 303 bits (153), Expect = 7e-080
Identities = 264/300 (88%), Gaps = 1/300 (0%)
Strand = Plus / Plus
Query: 228 caggcccaagggtatcgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcc 287
||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1 caggcccaagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgatgcc 60
Query: 288 taacattggatatggctctgacaagaagaccaggcactatcttcccaacaagtttaagaa 347
|||||||| || ||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 61 caacattggttacggctcagacaagaagaccaggcactacctccccaacaagttcaagaa 120
Query: 348 gtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcacaacaggacatactg 407
|||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 121 gtttgtggtgcacaatgtctctgagctggagttgctcatgatgcacaacaggacctactg 180
Query: 408 tgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgc 467
||| || || || |||||||| || || |||||||||||||| ||||| ||||| |||
Sbjct: 181 tgccgagattgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcg-tntgc 239
Query: 468 tcagcttgacattgtggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||| ||||| ||||||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 240 gcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacgagta 299
>gb|CF315367.1|CF315367 HD--04-E05.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-E05, mRNA sequence
Length = 562
Score = 303 bits (153), Expect = 7e-080
Identities = 258/293 (88%)
Strand = Plus / Minus
Query: 235 aagggtatcgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacatt 294
|||||||| ||||| ||||||||| ||||||||||||||||||| |||||||| || |||
Sbjct: 555 aagggtattgactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatatt 496
Query: 295 ggatatggctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtc 354
|||||||| || ||||||||||||||||| || || ||||||||||| |||||||||||
Sbjct: 495 ggatatggttcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtg 436
Query: 355 gtgcacaatgtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaa 414
|||||||| || || ||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 435 gtgcacaacgtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaa 376
Query: 415 atcgcacacaacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagctt 474
|| || || || |||||||| ||||| |||||||| || |||||||| ||||||||||||
Sbjct: 375 attgctcataatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagctt 316
Query: 475 gacattgtggtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
|||||||| |||||||| ||||||||| | | ||||||||||| ||||||||
Sbjct: 315 gacattgtcgtcaccaacaagcttgccaggttacgcagccaggaggatgagta 263
>gb|CX728710.1|CX728710 OSJNEf11I21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11I21 3', mRNA sequence
Length = 469
Score = 301 bits (152), Expect = 3e-079
Identities = 251/284 (88%)
Strand = Plus / Minus
Query: 244 gactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggc 303
||||||||||||||| | |||||||||||||||||||||||||| |||||||| || |||
Sbjct: 465 gactcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggc 406
Query: 304 tctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaat 363
|| |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 405 tcagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaat 346
Query: 364 gtttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacac 423
|| ||||||||||||||||| ||||||||||||||||| |||||||| || || || |||
Sbjct: 345 gtctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccac 286
Query: 424 aacgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtg 483
||||| || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 285 aacgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtg 226
Query: 484 gtcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
|||||||| |||||||| | ||||| |||||||| || |||||
Sbjct: 225 gtcaccaacaagcttgcaaggctccgtagccaggaggacgagta 182
>gb|CB000315.1|CB000315 S345U_E09 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 510
Score = 291 bits (147), Expect = 3e-076
Identities = 249/283 (87%)
Strand = Plus / Plus
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||| ||||||||| ||||||||||||||||||| || ||||| || ||||||||||| |
Sbjct: 5 actcacgtgtcaggaggaagttcaagggatgcacattcatgcccaatattggatatggtt 64
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| ||||||||||||||||| || || ||||||||||| ||||||||||| |||||||| |
Sbjct: 65 cggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaacg 124
Query: 365 tttctgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcacaca 424
| || ||||||||| ||||||||||||||||||||| |||||||||||||| || || |
Sbjct: 125 tctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctcata 184
Query: 425 acgtgtccactaagaagcgcaaggaaatcgtggagcgagctgctcagcttgacattgtgg 484
| |||||||| ||||| |||||||| || |||||||| |||||||||||||||||||| |
Sbjct: 185 atgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgtcg 244
Query: 485 tcaccaataagcttgcccgtctccgcagccaggaagatgagta 527
||||||| ||||||||| | || ||||||||||| ||||||||
Sbjct: 245 tcaccaacaagcttgccaggctacgcagccaggaggatgagta 287
>gb|C27421.1|C27421 C27421 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51836_1A, mRNA sequence
Length = 346
Score = 289 bits (146), Expect = 1e-075
Identities = 230/259 (88%)
Strand = Plus / Plus
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
|||||||| |||||||||||||||| |||||||||||||||||| ||||| | |||||||
Sbjct: 87 gcctcaagacaagctggcgcaggccaaagggtatcgactcccgtttcaggagaaagttca 146
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
|||||||||| || |||||||| ||||| ||||| ||| |||||||||| ||||| || |
Sbjct: 147 agggatgcactttnatgcctaatattggctatggttctnacaagaagacgaggcattacc 206
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
|||||||||| || ||||||||||| || |||||||| |||||||||||||| |||||||
Sbjct: 207 ttcccaacaaattcaagaagtttgtngtccacaatgtctctgagctggagttacttatga 266
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaagg 448
||||||||||||||||||||||||| ||||| ||||| || || || | |||||||||||
Sbjct: 267 tgcacaacaggacatactgtgctgagatcgctcacaatgtctcaacgaggaagcgcaagg 326
Query: 449 aaatcgtggagcgagctgc 467
| ||||||||||| |||||
Sbjct: 327 agatcgtggagcgtgctgc 345
Score = 77.8 bits (39), Expect = 7e-012
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 124 aagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaag 183
||||||||||||||| | |||| |||||||||| ||||||||||| ||||||||||||
Sbjct: 1 aagatggcggtgccgttnctgacgaagaagatcgtnaagaagcgggtgaagcagttcaag 60
Query: 184 aggcc 188
|||||
Sbjct: 61 aggcc 65
>gb|CB683771.1|CB683771 OSJNEf12J22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf12J22 5', mRNA sequence
Length = 452
Score = 281 bits (142), Expect = 2e-073
Identities = 235/266 (88%)
Strand = Plus / Plus
Query: 262 aagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccagg 321
|||||||||||||||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 24 aagttcaagggatgcaccttgatgcccaacattggttacggctcagacaagaagaccagg 83
Query: 322 cactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttg 381
||||| || ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 84 cactacctccccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagttg 143
Query: 382 cttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaag 441
|| ||||||||||||||||| |||||||| || || || |||||||| || || ||||||
Sbjct: 144 ctcatgatgcacaacaggacctactgtgccgagattgcccacaacgtctctacgaagaag 203
Query: 442 cgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcc 501
|||||||| ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 204 cgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgca 263
Query: 502 cgtctccgcagccaggaagatgagta 527
| ||||| |||||||| || |||||
Sbjct: 264 aggctccgtagccaggaggacgagta 289
>gb|C27768.1|C27768 C27768 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52822_1A, mRNA sequence
Length = 375
Score = 280 bits (141), Expect = 1e-072
Identities = 281/327 (85%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 123 gaagatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaa 182
|||||||||||| || || |||| |||||||||||||||||||||| |||||||||||
Sbjct: 46 gaagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaa 105
Query: 183 gaggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtat 242
|||||| ||| ||||||||||| |||||||| ||||||||||||| || ||||||||
Sbjct: 106 gaggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtat 165
Query: 243 cgactcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatgg 302
||||| ||| ||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 166 tgactcacgtntcaggaggaagttcaagggatgcacattgatgcccaatattggatatgg 225
Query: 303 ctctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
|| ||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 226 ttcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaa 285
Query: 363 tgtttc-tgagctggagttgcttatgatgcacaacaggacatactgtgctgaaatcgcac 421
|| || |||||||| | ||||||||||||||||||| |||||||||||||| || |
Sbjct: 286 cgtctcanaagctggagcttcttatgatgcacaacaggatgtactgtgctgaaattgctc 345
Query: 422 acaacgtgtccactaagaagcgcaagg 448
| || |||||||| | ||| |||||||
Sbjct: 346 ataatgtgtccacgaggaaacgcaagg 372
>gb|C74132.1|C74132 C74132 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30472_1A, mRNA sequence
Length = 309
Score = 268 bits (135), Expect = 4e-069
Identities = 232/266 (87%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||||| |
Sbjct: 41 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaancagttcaana 100
Query: 185 ggccccacctcgaccgctacaagtgcctcaagccaagctggcgcaggcccaagggtatcg 244
||||||| ||| | || ||||||||||||||||||||||||||||||||||| |
Sbjct: 101 ggccccatantgacngnnacctatgcctcaagccaagctggcgcaggcccaagggtattg 160
Query: 245 actcccgtgtcaggcggaagttcaagggatgcaccttgatgcctaacattggatatggct 304
|||||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 161 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 220
Query: 305 ctgacaagaagaccaggcactatcttcccaacaagtttaagaagtttgtcgtgcacaatg 364
| |||||||||||||||||||| | ||||| ||||| ||||||||||| ||| | ||||
Sbjct: 221 cagacaagaagaccaggcactacntccccaanaagttcaagaagtttgtggtg-aaaatg 279
Query: 365 tttctgagctggagttgcttatgatg 390
| ||||||||||||| ||| ||||||
Sbjct: 280 tctctgagctggagtngctcatgatg 305
>gb|AU184450.1|AU184450 AU184450 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2341, mRNA sequence
Length = 449
Score = 268 bits (135), Expect = 4e-069
Identities = 230/262 (87%)
Strand = Plus / Plus
Query: 266 tcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcact 325
||||||||||| |||||||||| |||||||| || ||||| |||||||||||||||||||
Sbjct: 1 tcaagggatgcnccttgatgcccaacattggttacggctcagacaagaagaccaggcact 60
Query: 326 atcttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgctta 385
| || ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 61 acctccccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctca 120
Query: 386 tgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgca 445
|||||||||||||||| |||||||| || || || |||||||| || || ||||||||||
Sbjct: 121 tgatgcacaacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgca 180
Query: 446 aggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtc 505
|||| ||||| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | |
Sbjct: 181 aggagatcgttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggc 240
Query: 506 tccgcagccaggaagatgagta 527
|||| |||||||| || |||||
Sbjct: 241 tccgtagccaggaggacgagta 262
>gb|AQ329713.1|AQ329713 nbxb0045J15f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0045J15f, DNA sequence
Length = 624
Score = 264 bits (133), Expect = 6e-068
Identities = 172/185 (92%)
Strand = Plus / Minus
Query: 215 agccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagggat 274
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 399 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 340
Query: 275 gcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttccca 334
||||||||||||| |||||||| || ||||| |||||||||||||||||||| || ||||
Sbjct: 339 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 280
Query: 335 acaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcaca 394
||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 279 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 220
Query: 395 acagg 399
|||||
Sbjct: 219 acagg 215
Score = 75.8 bits (38), Expect = 3e-011
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 394 aacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatc 453
|||||||| |||||||| || || || |||||||| || || |||||||||||||| |||
Sbjct: 98 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 39
Query: 454 gtggagcgagctgctcagcttgacattgtggtcaccaa 491
| ||||| ||||| ||||| ||||| |||||||||||
Sbjct: 38 gatgagcgtgctgcgcagctcgacatcgtggtcaccaa 1
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1191_A10
Length = 140643
Score = 264 bits (133), Expect = 6e-068
Identities = 172/185 (92%)
Strand = Plus / Plus
Query: 215 agccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagggat 274
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 28940 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 28999
Query: 275 gcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttccca 334
||||||||||||| |||||||| || ||||| |||||||||||||||||||| || ||||
Sbjct: 29000 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 29059
Query: 335 acaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcaca 394
||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 29060 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 29119
Query: 395 acagg 399
|||||
Sbjct: 29120 acagg 29124
Score = 101 bits (51), Expect = 5e-019
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 27785 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 27844
Query: 185 ggcccca 191
|||||||
Sbjct: 27845 ggcccca 27851
Score = 99.6 bits (50), Expect = 2e-018
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 394 aacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatc 453
|||||||| |||||||| || || || |||||||| || || |||||||||||||| |||
Sbjct: 29241 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 29300
Query: 454 gtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgcagc 513
|| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | ||||| |||
Sbjct: 29301 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 29360
Query: 514 caggaagatgagta 527
||||| || |||||
Sbjct: 29361 caggaggacgagta 29374
>gb|AACV01018885.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018885, whole
genome shotgun sequence
Length = 93413
Score = 264 bits (133), Expect = 6e-068
Identities = 172/185 (92%)
Strand = Plus / Minus
Query: 215 agccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagggat 274
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 89415 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 89356
Query: 275 gcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttccca 334
||||||||||||| |||||||| || ||||| |||||||||||||||||||| || ||||
Sbjct: 89355 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 89296
Query: 335 acaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcaca 394
||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 89295 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 89236
Query: 395 acagg 399
|||||
Sbjct: 89235 acagg 89231
Score = 101 bits (51), Expect = 5e-019
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 90570 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 90511
Query: 185 ggcccca 191
|||||||
Sbjct: 90510 ggcccca 90504
Score = 99.6 bits (50), Expect = 2e-018
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 394 aacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatc 453
|||||||| |||||||| || || || |||||||| || || |||||||||||||| |||
Sbjct: 89114 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 89055
Query: 454 gtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgcagc 513
|| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | ||||| |||
Sbjct: 89054 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 88995
Query: 514 caggaagatgagta 527
||||| || |||||
Sbjct: 88994 caggaggacgagta 88981
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 264 bits (133), Expect = 6e-068
Identities = 172/185 (92%)
Strand = Plus / Plus
Query: 215 agccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagggat 274
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 25846922 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 25846981
Query: 275 gcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttccca 334
||||||||||||| |||||||| || ||||| |||||||||||||||||||| || ||||
Sbjct: 25846982 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 25847041
Query: 335 acaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcaca 394
||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 25847042 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 25847101
Query: 395 acagg 399
|||||
Sbjct: 25847102 acagg 25847106
Score = 101 bits (51), Expect = 5e-019
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 25845767 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 25845826
Query: 185 ggcccca 191
|||||||
Sbjct: 25845827 ggcccca 25845833
Score = 99.6 bits (50), Expect = 2e-018
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 394 aacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatc 453
|||||||| |||||||| || || || |||||||| || || |||||||||||||| |||
Sbjct: 25847223 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 25847282
Query: 454 gtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgcagc 513
|| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | ||||| |||
Sbjct: 25847283 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 25847342
Query: 514 caggaagatgagta 527
||||| || |||||
Sbjct: 25847343 caggaggacgagta 25847356
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 264 bits (133), Expect = 6e-068
Identities = 172/185 (92%)
Strand = Plus / Plus
Query: 215 agccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagggat 274
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 17307766 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 17307825
Query: 275 gcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttccca 334
||||||||||||| |||||||| || ||||| |||||||||||||||||||| || ||||
Sbjct: 17307826 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 17307885
Query: 335 acaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcaca 394
||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 17307886 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 17307945
Query: 395 acagg 399
|||||
Sbjct: 17307946 acagg 17307950
Score = 101 bits (51), Expect = 5e-019
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 17306611 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 17306670
Query: 185 ggcccca 191
|||||||
Sbjct: 17306671 ggcccca 17306677
Score = 99.6 bits (50), Expect = 2e-018
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 394 aacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatc 453
|||||||| |||||||| || || || |||||||| || || |||||||||||||| |||
Sbjct: 17308067 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 17308126
Query: 454 gtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgcagc 513
|| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | ||||| |||
Sbjct: 17308127 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 17308186
Query: 514 caggaagatgagta 527
||||| || |||||
Sbjct: 17308187 caggaggacgagta 17308200
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 264 bits (133), Expect = 6e-068
Identities = 172/185 (92%)
Strand = Plus / Plus
Query: 215 agccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagggat 274
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 24909772 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 24909831
Query: 275 gcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttccca 334
||||||||||||| |||||||| || ||||| |||||||||||||||||||| || ||||
Sbjct: 24909832 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 24909891
Query: 335 acaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgcaca 394
||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 24909892 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 24909951
Query: 395 acagg 399
|||||
Sbjct: 24909952 acagg 24909956
Score = 101 bits (51), Expect = 5e-019
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 125 agatggcggtgccgctgttgactcagaagatcgtgaagaagcgggtcaagcagttcaaga 184
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 24908617 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 24908676
Query: 185 ggcccca 191
|||||||
Sbjct: 24908677 ggcccca 24908683
Score = 99.6 bits (50), Expect = 2e-018
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 394 aacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaatc 453
|||||||| |||||||| || || || |||||||| || || |||||||||||||| |||
Sbjct: 24910073 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 24910132
Query: 454 gtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgcagc 513
|| ||||| ||||| ||||| ||||| ||||||||||| |||||||| | ||||| |||
Sbjct: 24910133 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 24910192
Query: 514 caggaagatgagta 527
||||| || |||||
Sbjct: 24910193 caggaggacgagta 24910206
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 738,524
Number of Sequences: 438736
Number of extensions: 738524
Number of successful extensions: 3637
Number of sequences better than 0.5: 77
Number of HSP's better than 0.5 without gapping: 76
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3397
Number of HSP's gapped (non-prelim): 200
length of query: 688
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 667
effective length of database: 2,791,206,460
effective search space: 1861734708820
effective search space used: 1861734708820
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)