BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441114.2.1
(964 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK059820.1| Oryza sativa (japonica cultivar-group) cDNA... 498 e-138
dbj|AK104580.1| Oryza sativa (japonica cultivar-group) cDNA... 498 e-138
gb|CB685462.1|CB685462 OSJNEf15N20.f OSJNEf Oryza sativa (j... 494 e-137
ref|NM_191522.1| Oryza sativa (japonica cultivar-group), p... 492 e-136
dbj|AK059889.1| Oryza sativa (japonica cultivar-group) cDNA... 462 e-127
gb|CF313933.1|CF313933 HD--02-E06.g1 OsHDAC1-overexpressing... 426 e-117
gb|CF321864.1|CF321864 HD--13-E06.b1 OsHDAC1-overexpressing... 396 e-108
gb|CF320504.1|CF320504 HD--11-G20.b1 OsHDAC1-overexpressing... 369 2e-099
gb|CF314098.1|CF314098 HD--02-H23.g1 OsHDAC1-overexpressing... 365 3e-098
gb|AC130597.2| Oryza sativa (japonica cultivar-group) chrom... 365 3e-098
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 365 3e-098
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 365 3e-098
gb|CF320071.1|CF320071 HD--10-N01.b1 OsHDAC1-overexpressing... 361 5e-097
gb|CF320441.1|CF320441 HD--11-F10.b1 OsHDAC1-overexpressing... 357 7e-096
gb|CF313613.1|CF313613 HD--01-M21.g1 OsHDAC1-overexpressing... 353 1e-094
gb|CF318881.1|CF318881 HD--09-C23.b1 OsHDAC1-overexpressing... 353 1e-094
gb|CF319857.1|CF319857 HD--10-I09.b1 OsHDAC1-overexpressing... 353 1e-094
gb|CF333629.1|CF333629 JMT--02-J16.g1 AtJMT-overexpressing ... 353 1e-094
gb|CF292063.1|CF292063 14ROOT--02-L22.g1 Rice root plasmid ... 351 4e-094
gb|CF321565.1|CF321565 HD--12-N21.b1 OsHDAC1-overexpressing... 351 4e-094
gb|CF279607.1|CF279607 14ETL--05-P14.b1 Rice etiolated leaf... 345 3e-092
gb|CF321625.1|CF321625 HD--12-P03.b1 OsHDAC1-overexpressing... 345 3e-092
gb|CF334593.1|CF334593 JMT--03-P04.g1 AtJMT-overexpressing ... 345 3e-092
gb|CF313433.1|CF313433 HD--01-J01.g1 OsHDAC1-overexpressing... 337 7e-090
gb|CF320163.1|CF320163 HD--10-O23.b1 OsHDAC1-overexpressing... 337 7e-090
gb|CF335855.1|CF335855 JMT--05-L05.b1 AtJMT-overexpressing ... 337 7e-090
gb|CF320553.1|CF320553 HD--11-H24.b1 OsHDAC1-overexpressing... 335 3e-089
gb|CF315819.1|CF315819 HD--04-O02.b1 OsHDAC1-overexpressing... 329 2e-087
gb|CF319644.1|CF319644 HD--10-D16.b1 OsHDAC1-overexpressing... 329 2e-087
gb|CF321964.1|CF321964 HD--13-G08.b1 OsHDAC1-overexpressing... 327 6e-087
gb|AACV01012500.1| Oryza sativa (japonica cultivar-group) c... 321 4e-085
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 321 4e-085
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 321 4e-085
gb|CF320645.1|CF320645 HD--11-J22.b1 OsHDAC1-overexpressing... 309 2e-081
gb|CF333898.1|CF333898 JMT--02-P18.g1 AtJMT-overexpressing ... 303 9e-080
gb|CV733008.1|CV733008 FLO--07-L20.g1 Rice flower lambda ph... 303 9e-080
gb|CB673697.1|CB673697 OSJNEe08F18.r OSJNEe Oryza sativa (j... 299 1e-078
gb|CF292539.1|CF292539 30DGS--01-G10.g1 Rice leaf plasmid c... 299 1e-078
gb|CF336845.1|CF336845 JMT--07-A21.b1 AtJMT-overexpressing ... 293 9e-077
gb|CF319433.1|CF319433 HD--09-O23.b1 OsHDAC1-overexpressing... 266 2e-068
gb|CF320215.1|CF320215 HD--11-A02.b1 OsHDAC1-overexpressing... 264 8e-068
gb|CB685463.1|CB685463 OSJNEf15N20.r OSJNEf Oryza sativa (j... 256 2e-065
gb|CF320352.1|CF320352 HD--11-D12.b1 OsHDAC1-overexpressing... 234 7e-059
gb|CF320834.1|CF320834 HD--11-N21.b1 OsHDAC1-overexpressing... 224 7e-056
gb|AU183981.1|AU183981 AU183981 Rice root Oryza sativa (jap... 218 4e-054
gb|AU183982.1|AU183982 AU183982 Rice root Oryza sativa (jap... 214 7e-053
dbj|AP003406.3| Oryza sativa (japonica cultivar-group) geno... 210 1e-051
gb|AACV01002465.1| Oryza sativa (japonica cultivar-group) c... 210 1e-051
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 210 1e-051
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 210 1e-051
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 210 1e-051
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 210 1e-051
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 210 1e-051
gb|CF319434.1|CF319434 HD--09-O23.g1 OsHDAC1-overexpressing... 208 4e-051
gb|CF292538.1|CF292538 30DGS--01-G10.b1 Rice leaf plasmid c... 198 4e-048
gb|CF321566.1|CF321566 HD--12-N21.g1 OsHDAC1-overexpressing... 182 2e-043
gb|CF321965.1|CF321965 HD--13-G08.g1 OsHDAC1-overexpressing... 170 9e-040
gb|CF292062.1|CF292062 14ROOT--02-L22.b1 Rice root plasmid ... 168 4e-039
gb|CF279608.1|CF279608 14ETL--05-P14.g1 Rice etiolated leaf... 163 2e-037
gb|CF320072.1|CF320072 HD--10-N01.g1 OsHDAC1-overexpressing... 163 2e-037
gb|CF195930.1|CF195930 Azbi2.1_D11 AZ-BI Oryza sativa (japo... 155 5e-035
gb|CF319858.1|CF319858 HD--10-I09.g1 OsHDAC1-overexpressing... 155 5e-035
gb|CF320878.1|CF320878 HD--11-O20.g1 OsHDAC1-overexpressing... 155 5e-035
gb|CF320646.1|CF320646 HD--11-J22.g1 OsHDAC1-overexpressing... 147 1e-032
gb|AU065458.1|AU065458 AU065458 Rice root Oryza sativa (jap... 139 3e-030
gb|CF317247.1|CF317247 HD--06-O01.b1 OsHDAC1-overexpressing... 133 2e-028
gb|AU162525.2|AU162525 AU162525 Rice root Oryza sativa (jap... 133 2e-028
gb|AU032243.1|AU032243 AU032243 Rice root Oryza sativa (jap... 119 3e-024
gb|CF320835.1|CF320835 HD--11-N21.g1 OsHDAC1-overexpressing... 107 1e-020
gb|CF314097.1|CF314097 HD--02-H23.b1 OsHDAC1-overexpressing... 96 4e-017
gb|D23815.1|D23815 RICR0242A Rice root Oryza sativa (japoni... 82 6e-013
gb|CA997867.1|CA997867 S234B1_E09 Rice cold stress germinat... 82 6e-013
gb|CF297832.1|CF297832 30DGS--08-P05.b1 Rice leaf plasmid c... 82 6e-013
gb|CF308685.1|CF308685 ABF--02-J15.b1 ABF3-overexpressing t... 82 6e-013
gb|CF321378.1|CF321378 HD--12-J21.b1 OsHDAC1-overexpressing... 82 6e-013
dbj|AK070351.1| Oryza sativa (japonica cultivar-group) cDNA... 82 6e-013
ref|XM_480009.1| Oryza sativa (japonica cultivar-group), mRNA 82 6e-013
gb|AACV01012501.1| Oryza sativa (japonica cultivar-group) c... 78 1e-011
gb|CF282266.1|CF282266 14ETL--09-L05.g1 Rice etiolated leaf... 74 2e-010
gb|CB673696.1|CB673696 OSJNEe08F18.f OSJNEe Oryza sativa (j... 66 4e-008
gb|CF308686.1|CF308686 ABF--02-J15.g1 ABF3-overexpressing t... 64 1e-007
gb|AACV01017228.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
dbj|AP003876.3| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|CF297833.1|CF297833 30DGS--08-P05.g1 Rice leaf plasmid c... 60 2e-006
gb|D28297.1|D28297 RICR1010A Rice root Oryza sativa (japoni... 58 9e-006
gb|CF321379.1|CF321379 HD--12-J21.g1 OsHDAC1-overexpressing... 58 9e-006
gb|AZ133661.1|AZ133661 OSJNBb0109I06f CUGI Rice BAC Library... 56 4e-005
dbj|AK110695.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
ref|XM_469744.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
gb|AU091704.1|AU091704 AU091704 Rice root Oryza sativa (jap... 50 0.002
gb|CF282265.1|CF282265 14ETL--09-L05.b1 Rice etiolated leaf... 50 0.002
gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 ... 46 0.035
gb|AACV01007915.1| Oryza sativa (japonica cultivar-group) c... 46 0.035
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 46 0.035
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.035
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.035
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 46 0.035
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.035
gb|AU172965.1|AU172965 AU172965 Rice immature leaf includin... 44 0.14
gb|AC026759.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.14
gb|AACV01021629.1| Oryza sativa (japonica cultivar-group) c... 44 0.14
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 44 0.14
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.14
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.14
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.14
gb|AC087546.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.14
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.14
>dbj|AK059820.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D02, full
insert sequence
Length = 993
Score = 498 bits (251), Expect = e-138
Identities = 524/615 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 76 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 135
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 136 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 195
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 196 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 255
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 256 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 315
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 316 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 375
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 376 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 435
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 436 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 495
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtccag 597
||||| || || || || ||||||||||| |||||| |||| ||||| | || |||
Sbjct: 496 gtgttcgtcccggtcgggtacaccttcggtgccaagatgtttaacatgggagaagttcag 555
Query: 598 ggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgag 657
|| |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||
Sbjct: 556 gggggcagcccgtacggcgccggcacctttgccgccgacggctcgaggtggccgacggaa 615
Query: 658 gtggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctc 717
||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 616 atggagctggagcacgccttccaccaggggaagtacttcgcaggcatcgcgaagaagctc 675
Query: 718 aagggctctgcttga 732
||||| || ||||||
Sbjct: 676 aaggggtccgcttga 690
>dbj|AK104580.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B10, full
insert sequence
Length = 971
Score = 498 bits (251), Expect = e-138
Identities = 524/615 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 76 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 135
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 136 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 195
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 196 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 255
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 256 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 315
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 316 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 375
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 376 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 435
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 436 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 495
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtccag 597
||||| || || || || ||||||||||| |||||| |||| ||||| | || |||
Sbjct: 496 gtgttcgtcccggtcgggtacaccttcggtgccaagatgtttaacatgggagaagttcag 555
Query: 598 ggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgag 657
|| |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||
Sbjct: 556 gggggcagcccgtacggcgccggcacctttgccgccgacggctcgaggtggccgacggaa 615
Query: 658 gtggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctc 717
||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 616 atggagctggagcacgccttccaccaggggaagtacttcgcaggcatcgcgaagaagctc 675
Query: 718 aagggctctgcttga 732
||||| || ||||||
Sbjct: 676 aaggggtccgcttga 690
>gb|CB685462.1|CB685462 OSJNEf15N20.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15N20 5', mRNA sequence
Length = 623
Score = 494 bits (249), Expect = e-137
Identities = 516/605 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 18 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 77
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 78 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 137
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 138 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 197
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 198 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 257
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 258 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 317
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 318 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 377
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 378 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 437
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtccag 597
||||| || || || || ||||||||||| |||||| |||| ||||| | || |||
Sbjct: 438 gtgttcgtcccggtcgggtacaccttcggtgccaagatgtttaacatgggagaagttcag 497
Query: 598 ggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgag 657
|| |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||
Sbjct: 498 gggggcagcccgtacggcgccggcacctttgccgccgacggctcgaggtggccgacggaa 557
Query: 658 gtggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctc 717
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 558 atggagctggagcacgccttccaccaggggaaatacttcgcacgcatcgcgaagaagctc 617
Query: 718 aaggg 722
|||||
Sbjct: 618 aaggg 622
>ref|NM_191522.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 612
Score = 492 bits (248), Expect = e-136
Identities = 521/612 (85%)
Strand = Plus / Plus
Query: 121 atggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaactagct 180
|||||||| ||| |||| || |||||||| || |||||||| ||||||| |||||||||
Sbjct: 1 atggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaactagct 60
Query: 181 gacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcaggtc 240
|| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||||
Sbjct: 61 gaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcaggtt 120
Query: 241 cctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgacgtg 300
||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| || |||
Sbjct: 121 cctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagatgtg 180
Query: 301 ccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccgaca 360
||| |||||||| || |||||| | |||||||| || ||||| |||||||| || |||
Sbjct: 181 ccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccctaca 240
Query: 361 aggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctctgg 420
||||| || |||||||| || |||||||| || ||||| ||||| |||||||| || |||
Sbjct: 241 aggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctgtgg 300
Query: 421 agggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccagggt 480
|| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 301 agtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccagggc 360
Query: 481 ggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatggtg 540
||||| || |||||||||||| |||| || || || ||| |||| |||||||||||||||
Sbjct: 361 ggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatggtg 420
Query: 541 tttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtccagggt 600
|| || || || || ||||||||||| |||||| |||| ||||| | || |||||
Sbjct: 421 ttcgtcccggtcgggtacaccttcggtgccaagatgtttaacatgggagaagttcagggg 480
Query: 601 ggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgaggtg 660
|||||||| |||||||||||||| || ||||||||||| ||||||||||||| || ||
Sbjct: 481 ggcagcccgtacggcgccggcacctttgccgccgacggctcgaggtggccgacggaaatg 540
Query: 661 gagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctcaag 720
||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 541 gagctggagcacgccttccaccaggggaagtacttcgcaggcatcgcgaagaagctcaag 600
Query: 721 ggctctgcttga 732
|| || ||||||
Sbjct: 601 gggtccgcttga 612
>dbj|AK059889.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C11, full
insert sequence
Length = 918
Score = 462 bits (233), Expect = e-127
Identities = 515/609 (84%)
Strand = Plus / Plus
Query: 115 tctccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaa 174
|||||||||||||| ||| ||||||| ||||| || || |||||||| ||||| | ||||
Sbjct: 88 tctccaatggcggtcaaggtctacgtcgtgtattactctatgtatggtcatgtcgccaaa 147
Query: 175 ctagctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatgg 234
|||||||| ||||||||||||||||| | |||||| ||||| || || | ||| ||||||
Sbjct: 148 ctagctgaggagatcaagaaaggtgcttcatctgtcgaaggcgtggaagttaaaatatgg 207
Query: 235 caggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagccc 294
||||||||||||| ||||| || || ||||| || |||||||||||||| || | | |
Sbjct: 208 caggtccctgaaaccctctcagaggaggtgctgggcaagatgggcgcgccgccgaggagc 267
Query: 295 gacgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggttt 354
|||| ||| || ||| | |||||||| || || ||||| ||||| |||| || |||||
Sbjct: 268 gacgcgccggtgatcgcgccgcaggagctcgcggaggccgacggcgtcctgttcgggttc 327
Query: 355 ccgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtggg 414
||||| |||||||| |||||||| || |||||||||||||||||||| |||||||| ||
Sbjct: 328 ccgacgaggttcggcatgatggcggcgcagatgaaggcgttcttcgacgccaccggcggc 387
Query: 415 ctctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacc 474
|| ||| | |||||||||||||| |||||||| || ||| | ||||||||||| || |||
Sbjct: 388 ctgtggcgcgagcagagcctcgccggcaagcccgcgggcgtcttcttcagcaccggcacc 447
Query: 475 cagggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggc 534
||||| || ||||| ||||| || ||||| |||||| | || |||||| |||||||||||
Sbjct: 448 cagggcggcggccaggagacgacgccgctcacggcggtgacgcagctggcgcaccacggc 507
Query: 535 atggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtc 594
|||||||| || || || |||||||| |||||||||||| |||||| ||||| |||
Sbjct: 508 atggtgttcgtcccggtcggctacacgttcggcgccaagatgttcgacatggcggcggtg 567
Query: 595 cagggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagc 654
|| || |||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 568 cacggcggcagcccgtacggcgccggcacgttcgccggcgacgggtcgaggtggccgtcg 627
Query: 655 gaggtggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaag 714
|||| ||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 628 gaggcggagctggagcacgccttccaccagggcaagtacttcgctggcatcgccaagaag 687
Query: 715 ctcaagggc 723
|||||||||
Sbjct: 688 ctcaagggc 696
>gb|CF313933.1|CF313933 HD--02-E06.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-E06, mRNA sequence
Length = 661
Score = 426 bits (215), Expect = e-117
Identities = 479/566 (84%), Gaps = 1/566 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 96 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 155
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 156 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 215
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 216 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 275
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 276 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 335
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 336 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 395
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 396 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 455
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 456 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 515
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaagctgttc-ggcatggaccaggtcca 596
||||| || || || || ||||||||||| |||||| |||| ||||| | || ||
Sbjct: 516 gtgttcgtcccggtcgggtacaccttcggtgccaagatgttntaacatgggagaagttca 575
Query: 597 gggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcga 656
||| |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||
Sbjct: 576 ggggggcagcccgtacggcgccggcacctttgccgccgacggctcgaggtggccgacgga 635
Query: 657 ggtggagctggagcacgccttccacc 682
||||||||||||||||||||||||
Sbjct: 636 aatggagctggagcacgccttccacc 661
>gb|CF321864.1|CF321864 HD--13-E06.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--13-E06, mRNA sequence
Length = 616
Score = 396 bits (200), Expect = e-108
Identities = 453/536 (84%), Gaps = 1/536 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 74 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 133
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 134 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 193
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 194 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 253
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 254 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 313
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 314 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 373
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 374 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 433
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 434 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 493
Query: 537 ggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtcca 596
|||||| || || || || ||||||||||| |||||| |||| ||||| | || ||
Sbjct: 494 ggtgttcgtcccggtcgggtacaccttcggtgccaagatgtttaacatgggagaagttca 553
Query: 597 gggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccga 652
||| |||||||| |||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 554 ggggggcagcccgtacggcgccggcacctttgccgccgacggctcgaggtggccga 609
>gb|CF320504.1|CF320504 HD--11-G20.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-G20, mRNA sequence
Length = 622
Score = 369 bits (186), Expect = 2e-099
Identities = 426/506 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 109 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 168
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 169 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 228
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| ||||||||| |||||||||| |||||||| ||
Sbjct: 229 gttcctgaaactctccatgaggaagtacttggaaaggtgggcgcgcctcctaagccagat 288
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 289 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 348
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 349 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 408
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 409 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 468
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 469 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 528
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtccag 597
||||| || || || || ||||||||||| |||||| |||| ||||| | || |||
Sbjct: 529 gtgttcgtcccggtcgggtacaccttcggtgccaagatgtttaacatgggagaagttcag 588
Query: 598 ggtggcagcccctacggcgccggcac 623
|| |||||||| ||||||||||||||
Sbjct: 589 gggggcagcccgtacggcgccggcac 614
>gb|CF314098.1|CF314098 HD--02-H23.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-H23, mRNA sequence
Length = 544
Score = 365 bits (184), Expect = 3e-098
Identities = 388/456 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 87 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 146
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 147 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 206
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 207 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 266
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 267 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 326
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 327 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 386
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 387 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 446
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 447 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 506
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaag 573
||||| || || || || ||||||||||| ||||||
Sbjct: 507 gtgttcgtcccggtcgggtacaccttcggtgccaag 542
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0017K09, complete sequence
Length = 155525
Score = 365 bits (184), Expect = 3e-098
Identities = 412/488 (84%)
Strand = Plus / Minus
Query: 236 aggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccg 295
|||||||||||| ||||| || || ||||| || |||||||||||||| || | | ||
Sbjct: 39376 aggtccctgaaaccctctcagaggaggtgctgggcaagatgggcgcgccgccgaggagcg 39317
Query: 296 acgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttc 355
||| ||| || ||| | |||||||| || || ||||| ||||| |||| || ||||| |
Sbjct: 39316 acgcgccggtgatcgcgccgcaggagctcgcggaggccgacggcgtcctgttcgggttcc 39257
Query: 356 cgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggc 415
|||| |||||||| |||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 39256 cgacgaggttcggcatgatggcggcgcagatgaaggcgttcttcgacgccaccggcggcc 39197
Query: 416 tctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
| ||| | |||||||||||||| |||||||| || ||| | ||||||||||| || ||||
Sbjct: 39196 tgtggcgcgagcagagcctcgccggcaagcccgcgggcgtcttcttcagcaccggcaccc 39137
Query: 476 agggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggca 535
|||| || ||||| ||||| || ||||| |||||| | || |||||| ||||||||||||
Sbjct: 39136 agggcggcggccaggagacgacgccgctcacggcggtgacgcagctggcgcaccacggca 39077
Query: 536 tggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtcc 595
||||||| || || || |||||||| |||||||||||| |||||| ||||| ||| |
Sbjct: 39076 tggtgttcgtcccggtcggctacacgttcggcgccaagatgttcgacatggcggcggtgc 39017
Query: 596 agggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcg 655
| || |||||||| |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 39016 acggcggcagcccgtacggcgccggcacgttcgccggcgacgggtcgaggtggccgtcgg 38957
Query: 656 aggtggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagc 715
||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 38956 aggcggagctggagcacgccttccaccagggcaagtacttcgctggcatcgccaagaagc 38897
Query: 716 tcaagggc 723
||||||||
Sbjct: 38896 tcaagggc 38889
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 154 atgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgccttatctgttgaa 213
|||||||| ||||| | |||||||||||| ||||||||||||||||| | |||||| |||
Sbjct: 40018 atgtatggtcatgtcgccaaactagctgaggagatcaagaaaggtgcttcatctgtcgaa 39959
Query: 214 ggtgttgaggctaagatatggcaggtc 240
|| || || | ||| ||||||||||||
Sbjct: 39958 ggcgtggaagttaaaatatggcaggtc 39932
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 365 bits (184), Expect = 3e-098
Identities = 412/488 (84%)
Strand = Plus / Minus
Query: 236 aggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccg 295
|||||||||||| ||||| || || ||||| || |||||||||||||| || | | ||
Sbjct: 915146 aggtccctgaaaccctctcagaggaggtgctgggcaagatgggcgcgccgccgaggagcg 915087
Query: 296 acgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttc 355
||| ||| || ||| | |||||||| || || ||||| ||||| |||| || ||||| |
Sbjct: 915086 acgcgccggtgatcgcgccgcaggagctcgcggaggccgacggcgtcctgttcgggttcc 915027
Query: 356 cgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggc 415
|||| |||||||| |||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 915026 cgacgaggttcggcatgatggcggcgcagatgaaggcgttcttcgacgccaccggcggcc 914967
Query: 416 tctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
| ||| | |||||||||||||| |||||||| || ||| | ||||||||||| || ||||
Sbjct: 914966 tgtggcgcgagcagagcctcgccggcaagcccgcgggcgtcttcttcagcaccggcaccc 914907
Query: 476 agggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggca 535
|||| || ||||| ||||| || ||||| |||||| | || |||||| ||||||||||||
Sbjct: 914906 agggcggcggccaggagacgacgccgctcacggcggtgacgcagctggcgcaccacggca 914847
Query: 536 tggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtcc 595
||||||| || || || |||||||| |||||||||||| |||||| ||||| ||| |
Sbjct: 914846 tggtgttcgtcccggtcggctacacgttcggcgccaagatgttcgacatggcggcggtgc 914787
Query: 596 agggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcg 655
| || |||||||| |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 914786 acggcggcagcccgtacggcgccggcacgttcgccggcgacgggtcgaggtggccgtcgg 914727
Query: 656 aggtggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagc 715
||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 914726 aggcggagctggagcacgccttccaccagggcaagtacttcgctggcatcgccaagaagc 914667
Query: 716 tcaagggc 723
||||||||
Sbjct: 914666 tcaagggc 914659
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 154 atgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgccttatctgttgaa 213
|||||||| ||||| | |||||||||||| ||||||||||||||||| | |||||| |||
Sbjct: 915788 atgtatggtcatgtcgccaaactagctgaggagatcaagaaaggtgcttcatctgtcgaa 915729
Query: 214 ggtgttgaggctaagatatggcaggtc 240
|| || || | ||| ||||||||||||
Sbjct: 915728 ggcgtggaagttaaaatatggcaggtc 915702
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 365 bits (184), Expect = 3e-098
Identities = 412/488 (84%)
Strand = Plus / Minus
Query: 236 aggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccg 295
|||||||||||| ||||| || || ||||| || |||||||||||||| || | | ||
Sbjct: 24525194 aggtccctgaaaccctctcagaggaggtgctgggcaagatgggcgcgccgccgaggagcg 24525135
Query: 296 acgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttc 355
||| ||| || ||| | |||||||| || || ||||| ||||| |||| || ||||| |
Sbjct: 24525134 acgcgccggtgatcgcgccgcaggagctcgcggaggccgacggcgtcctgttcgggttcc 24525075
Query: 356 cgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggc 415
|||| |||||||| |||||||| || |||||||||||||||||||| |||||||| || |
Sbjct: 24525074 cgacgaggttcggcatgatggcggcgcagatgaaggcgttcttcgacgccaccggcggcc 24525015
Query: 416 tctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
| ||| | |||||||||||||| |||||||| || ||| | ||||||||||| || ||||
Sbjct: 24525014 tgtggcgcgagcagagcctcgccggcaagcccgcgggcgtcttcttcagcaccggcaccc 24524955
Query: 476 agggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggca 535
|||| || ||||| ||||| || ||||| |||||| | || |||||| ||||||||||||
Sbjct: 24524954 agggcggcggccaggagacgacgccgctcacggcggtgacgcagctggcgcaccacggca 24524895
Query: 536 tggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtcc 595
||||||| || || || |||||||| |||||||||||| |||||| ||||| ||| |
Sbjct: 24524894 tggtgttcgtcccggtcggctacacgttcggcgccaagatgttcgacatggcggcggtgc 24524835
Query: 596 agggtggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcg 655
| || |||||||| |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 24524834 acggcggcagcccgtacggcgccggcacgttcgccggcgacgggtcgaggtggccgtcgg 24524775
Query: 656 aggtggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagc 715
||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 24524774 aggcggagctggagcacgccttccaccagggcaagtacttcgctggcatcgccaagaagc 24524715
Query: 716 tcaagggc 723
||||||||
Sbjct: 24524714 tcaagggc 24524707
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 154 atgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgccttatctgttgaa 213
|||||||| ||||| | |||||||||||| ||||||||||||||||| | |||||| |||
Sbjct: 24525836 atgtatggtcatgtcgccaaactagctgaggagatcaagaaaggtgcttcatctgtcgaa 24525777
Query: 214 ggtgttgaggctaagatatggcaggtc 240
|| || || | ||| ||||||||||||
Sbjct: 24525776 ggcgtggaagttaaaatatggcaggtc 24525750
>gb|CF320071.1|CF320071 HD--10-N01.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-N01, mRNA sequence
Length = 526
Score = 361 bits (182), Expect = 5e-097
Identities = 382/449 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 74 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 133
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 134 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 193
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 194 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 253
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 254 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 313
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 314 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 373
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 374 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 433
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 434 ggcggtggtcangagactacaccgttgacagcaataactcagttgactcaccacggcatg 493
Query: 538 gtgtttgtgcccgtgggctacaccttcgg 566
||||| || || || || |||||||||||
Sbjct: 494 gtgttcgtcccggtcgggtacaccttcgg 522
>gb|CF320441.1|CF320441 HD--11-F10.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-F10, mRNA sequence
Length = 533
Score = 357 bits (180), Expect = 7e-096
Identities = 387/456 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 76 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 135
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 136 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 195
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 196 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 255
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 256 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 315
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 316 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 375
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 376 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 435
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| |||||||| |||
Sbjct: 436 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggtatg 495
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaag 573
||||| || || || || ||||||||||| ||||||
Sbjct: 496 gtgttcgtcccggtcgggtacaccttcggtgccaag 531
>gb|CF313613.1|CF313613 HD--01-M21.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-M21, mRNA sequence
Length = 538
Score = 353 bits (178), Expect = 1e-094
Identities = 392/462 (84%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 70 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 129
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 130 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 189
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 190 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 249
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 250 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 309
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 310 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 369
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 370 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 429
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 430 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 489
Query: 537 ggtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
|||||| || || || || ||||||||||| |||||| ||||
Sbjct: 490 ggtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 531
>gb|CF318881.1|CF318881 HD--09-C23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-C23, mRNA sequence
Length = 500
Score = 353 bits (178), Expect = 1e-094
Identities = 363/425 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 74 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 133
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 134 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 193
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 194 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 253
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 254 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 313
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 314 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 373
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 374 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 433
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 434 ggcggtggtcangagactacaccgttgacagcaataactcagttgactcaccacggcatg 493
Query: 538 gtgtt 542
|||||
Sbjct: 494 gtgtt 498
>gb|CF319857.1|CF319857 HD--10-I09.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-I09, mRNA sequence
Length = 513
Score = 353 bits (178), Expect = 1e-094
Identities = 363/425 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 74 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 133
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 134 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 193
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 194 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 253
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 254 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 313
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 314 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 373
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 374 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 433
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 434 ggcggtggtcangagactacaccgttgacagcaataactcagttgactcaccacggcatg 493
Query: 538 gtgtt 542
|||||
Sbjct: 494 gtgtt 498
>gb|CF333629.1|CF333629 JMT--02-J16.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-J16, mRNA sequence
Length = 541
Score = 353 bits (178), Expect = 1e-094
Identities = 392/462 (84%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 75 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 134
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 135 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 194
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 195 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 254
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 255 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 314
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 315 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 374
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 375 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 434
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 435 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 494
Query: 537 ggtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
|||||| || || || || ||||||||||| |||||| ||||
Sbjct: 495 ggtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 536
>gb|CF292063.1|CF292063 14ROOT--02-L22.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-L22, mRNA sequence
Length = 535
Score = 351 bits (177), Expect = 4e-094
Identities = 390/461 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 70 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 129
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 130 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 189
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 190 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 249
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 250 gtgccgacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 309
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 310 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 369
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 370 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 429
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||| ||
Sbjct: 430 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcctg 489
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
||||| || || || || ||||||||||| |||||| ||||
Sbjct: 490 gtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 530
>gb|CF321565.1|CF321565 HD--12-N21.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-N21, mRNA sequence
Length = 546
Score = 351 bits (177), Expect = 4e-094
Identities = 390/461 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 69 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 128
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| |||||||||| | ||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 129 gctgaagagatcaagattgttgcttcatctattgaaggtgttgaggctaaaatatggcag 188
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 189 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 248
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 249 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 308
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 309 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 368
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 369 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 428
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 429 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 488
Query: 538 gtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
||||| || || || || ||||||||||| |||||| ||||
Sbjct: 489 gtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 529
>gb|CF279607.1|CF279607 14ETL--05-P14.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--05-P14, mRNA sequence
Length = 544
Score = 345 bits (174), Expect = 3e-092
Identities = 391/462 (84%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 77 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 136
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||| | ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 137 gctaaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 196
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 197 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 256
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 257 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 316
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 317 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 376
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 377 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 436
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 437 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 496
Query: 537 ggtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
|||||| || || || || ||||||||||| |||||| ||||
Sbjct: 497 ggtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 538
>gb|CF321625.1|CF321625 HD--12-P03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-P03, mRNA sequence
Length = 586
Score = 345 bits (174), Expect = 3e-092
Identities = 391/462 (84%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 110 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 169
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 170 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 229
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 230 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 289
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 290 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 349
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 350 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 409
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 410 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 469
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| || || || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 470 gggcggaggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 529
Query: 537 ggtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
|||||| || || || || ||||||||||| |||||| ||||
Sbjct: 530 ggtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 571
>gb|CF334593.1|CF334593 JMT--03-P04.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--03-P04, mRNA sequence
Length = 514
Score = 345 bits (174), Expect = 3e-092
Identities = 364/426 (85%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 71 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 130
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| |||||||||||||||||||||||||||||
Sbjct: 131 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaagatatggcag 190
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 191 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 250
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 251 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 310
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 311 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 370
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 371 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 430
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 431 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 490
Query: 537 ggtgtt 542
||||||
Sbjct: 491 ggtgtt 496
>gb|CF313433.1|CF313433 HD--01-J01.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-J01, mRNA sequence
Length = 519
Score = 337 bits (170), Expect = 7e-090
Identities = 363/426 (85%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 77 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 136
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 137 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 196
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 197 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 256
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 257 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 316
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 317 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 376
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 377 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 436
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 437 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 496
Query: 537 ggtgtt 542
||||||
Sbjct: 497 ggtgtt 502
>gb|CF320163.1|CF320163 HD--10-O23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-O23, mRNA sequence
Length = 570
Score = 337 bits (170), Expect = 7e-090
Identities = 391/462 (84%), Gaps = 2/462 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 104 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 163
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 164 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 223
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 224 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 283
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 284 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 343
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 344 acaaggtttggcatgatggccgcgcagatgaaagcattctttgatgcaaccggtggcctg 403
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 404 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 463
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||| ||||
Sbjct: 464 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccac-gcat 522
Query: 537 ggtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
|||||| || || || || ||||||||||| |||||| ||||
Sbjct: 523 ggtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 564
>gb|CF335855.1|CF335855 JMT--05-L05.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--05-L05, mRNA sequence
Length = 543
Score = 337 bits (170), Expect = 7e-090
Identities = 363/426 (85%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 77 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 136
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 137 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 196
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 197 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 256
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 257 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 316
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 317 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 376
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 377 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 436
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 437 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 496
Query: 537 ggtgtt 542
||||||
Sbjct: 497 ggtgtt 502
>gb|CF320553.1|CF320553 HD--11-H24.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-H24, mRNA sequence
Length = 555
Score = 335 bits (169), Expect = 3e-089
Identities = 379/449 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 106 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 165
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| || | ||||||||||||||||||| |||||||||
Sbjct: 166 gctgaagagatcaagaagggtgcttttattattgaaggtgttgaggctaaaatatggcag 225
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 226 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 285
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 286 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 345
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || ||| |||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 346 acaaggtttggcatggtggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 405
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 406 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 465
Query: 478 ggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatg 537
|| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||||
Sbjct: 466 ggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcatg 525
Query: 538 gtgtttgtgcccgtgggctacaccttcgg 566
||||| || || || || |||||||||||
Sbjct: 526 gtgttcgtcccggtcgggtacaccttcgg 554
>gb|CF315819.1|CF315819 HD--04-O02.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-O02, mRNA sequence
Length = 560
Score = 329 bits (166), Expect = 2e-087
Identities = 389/462 (84%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 94 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 153
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
|||| ||||||| || ||||| | |||| ||||| ||||||||||||| |||||||||
Sbjct: 154 cctgaatagatcaaaaagggtgcttcatctattgaacgtgttgaggctaaaatatggcag 213
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 214 gttcctgaaactctccatgaagaagtacttggaaagatgggcgcgcctcctaagccagat 273
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 274 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 333
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 334 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 393
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca- 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 394 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 453
Query: 477 gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
||| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 454 gggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 513
Query: 537 ggtgtttgtgcccgtgggctacaccttcggcgccaagctgtt 578
|||||| || || || || ||||||||||| |||||| ||||
Sbjct: 514 ggtgttcgtcccggtcgggtacaccttcggtgccaagatgtt 555
>gb|CF319644.1|CF319644 HD--10-D16.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-D16, mRNA sequence
Length = 519
Score = 329 bits (166), Expect = 2e-087
Identities = 359/422 (85%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 77 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 136
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 137 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 196
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 197 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 256
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 257 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 316
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 317 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 376
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 377 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 436
Query: 478 gg-tggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcat 536
|| ||||| || |||||||||||| |||| || || || ||| |||| |||||||||||
Sbjct: 437 ggccggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggcat 496
Query: 537 gg 538
||
Sbjct: 497 gg 498
>gb|CF321964.1|CF321964 HD--13-G08.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--13-G08, mRNA sequence
Length = 472
Score = 327 bits (165), Expect = 6e-087
Identities = 333/389 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 74 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 133
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 134 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 193
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 194 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 253
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 254 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 313
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 314 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 373
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 374 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 433
Query: 478 ggtggtggccaagagactacaccgctgac 506
|| ||||| || |||||||||||| ||||
Sbjct: 434 ggcggtggtcaggagactacaccgttgac 462
>gb|AACV01012500.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012500, whole
genome shotgun sequence
Length = 9717
Score = 321 bits (162), Expect = 4e-085
Identities = 306/354 (86%)
Strand = Plus / Minus
Query: 370 atgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctctggagggagcag 429
|||||||| || |||||||||||||||||||| |||||||| || || ||| | ||||||
Sbjct: 9713 atgatggcggcgcagatgaaggcgttcttcgacgccaccggcggcctgtggcgcgagcag 9654
Query: 430 agcctcgctggcaagcctgccggcatgttcttcagcactggaacccagggtggtggccaa 489
|||||||| |||||||| || ||| | ||||||||||| || |||||||| || |||||
Sbjct: 9653 agcctcgccggcaagcccgcgggcgtcttcttcagcaccggcacccagggcggcggccag 9594
Query: 490 gagactacaccgctgacggcgattacccagctgacgcaccacggcatggtgtttgtgccc 549
||||| || ||||| |||||| | || |||||| ||||||||||||||||||| || ||
Sbjct: 9593 gagacgacgccgctcacggcggtgacgcagctggcgcaccacggcatggtgttcgtcccg 9534
Query: 550 gtgggctacaccttcggcgccaagctgttcggcatggaccaggtccagggtggcagcccc 609
|| |||||||| |||||||||||| |||||| ||||| ||| || || ||||||||
Sbjct: 9533 gtcggctacacgttcggcgccaagatgttcgacatggcggcggtgcacggcggcagcccg 9474
Query: 610 tacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgaggtggagctggag 669
|||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 9473 tacggcgccggcacgttcgccggcgacgggtcgaggtggccgtcggaggcggagctggag 9414
Query: 670 cacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctcaagggc 723
||||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 9413 cacgccttccaccagggcaagtacttcgctggcatcgccaagaagctcaagggc 9360
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 321 bits (162), Expect = 4e-085
Identities = 306/354 (86%)
Strand = Plus / Minus
Query: 370 atgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctctggagggagcag 429
|||||||| || |||||||||||||||||||| |||||||| || || ||| | ||||||
Sbjct: 6949292 atgatggcggcgcagatgaaggcgttcttcgacgccaccggcggcctgtggcgcgagcag 6949233
Query: 430 agcctcgctggcaagcctgccggcatgttcttcagcactggaacccagggtggtggccaa 489
|||||||| |||||||| || ||| | ||||||||||| || |||||||| || |||||
Sbjct: 6949232 agcctcgccggcaagcccgcgggcgtcttcttcagcaccggcacccagggcggcggccag 6949173
Query: 490 gagactacaccgctgacggcgattacccagctgacgcaccacggcatggtgtttgtgccc 549
||||| || ||||| |||||| | || |||||| ||||||||||||||||||| || ||
Sbjct: 6949172 gagacgacgccgctcacggcggtgacgcagctggcgcaccacggcatggtgttcgtcccg 6949113
Query: 550 gtgggctacaccttcggcgccaagctgttcggcatggaccaggtccagggtggcagcccc 609
|| |||||||| |||||||||||| |||||| ||||| ||| || || ||||||||
Sbjct: 6949112 gtcggctacacgttcggcgccaagatgttcgacatggcggcggtgcacggcggcagcccg 6949053
Query: 610 tacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgaggtggagctggag 669
|||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 6949052 tacggcgccggcacgttcgccggcgacgggtcgaggtggccgtcggaggcggagctggag 6948993
Query: 670 cacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctcaagggc 723
||||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 6948992 cacgccttccaccagggcaagtacttcgctggcatcgccaagaagctcaagggc 6948939
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 154 atgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgccttatctgttgaa 213
|||||||| ||||| | |||||||||||| ||||||||||||||||| | |||||| |||
Sbjct: 6949927 atgtatggtcatgtcgccaaactagctgaggagatcaagaaaggtgcttcatctgtcgaa 6949868
Query: 214 ggtgttgaggctaagatatggcaggtc 240
|| || || | ||| ||||||||||||
Sbjct: 6949867 ggcgtggaagttaaaatatggcaggtc 6949841
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 321 bits (162), Expect = 4e-085
Identities = 306/354 (86%)
Strand = Plus / Minus
Query: 370 atgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctctggagggagcag 429
|||||||| || |||||||||||||||||||| |||||||| || || ||| | ||||||
Sbjct: 24249605 atgatggcggcgcagatgaaggcgttcttcgacgccaccggcggcctgtggcgcgagcag 24249546
Query: 430 agcctcgctggcaagcctgccggcatgttcttcagcactggaacccagggtggtggccaa 489
|||||||| |||||||| || ||| | ||||||||||| || |||||||| || |||||
Sbjct: 24249545 agcctcgccggcaagcccgcgggcgtcttcttcagcaccggcacccagggcggcggccag 24249486
Query: 490 gagactacaccgctgacggcgattacccagctgacgcaccacggcatggtgtttgtgccc 549
||||| || ||||| |||||| | || |||||| ||||||||||||||||||| || ||
Sbjct: 24249485 gagacgacgccgctcacggcggtgacgcagctggcgcaccacggcatggtgttcgtcccg 24249426
Query: 550 gtgggctacaccttcggcgccaagctgttcggcatggaccaggtccagggtggcagcccc 609
|| |||||||| |||||||||||| |||||| ||||| ||| || || ||||||||
Sbjct: 24249425 gtcggctacacgttcggcgccaagatgttcgacatggcggcggtgcacggcggcagcccg 24249366
Query: 610 tacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgaggtggagctggag 669
|||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 24249365 tacggcgccggcacgttcgccggcgacgggtcgaggtggccgtcggaggcggagctggag 24249306
Query: 670 cacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctcaagggc 723
||||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 24249305 cacgccttccaccagggcaagtacttcgctggcatcgccaagaagctcaagggc 24249252
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 154 atgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgccttatctgttgaa 213
|||||||| ||||| | |||||||||||| ||||||||||||||||| | |||||| |||
Sbjct: 24250240 atgtatggtcatgtcgccaaactagctgaggagatcaagaaaggtgcttcatctgtcgaa 24250181
Query: 214 ggtgttgaggctaagatatggcaggtc 240
|| || || | ||| ||||||||||||
Sbjct: 24250180 ggcgtggaagttaaaatatggcaggtc 24250154
>gb|CF320645.1|CF320645 HD--11-J22.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-J22, mRNA sequence
Length = 531
Score = 309 bits (156), Expect = 2e-081
Identities = 327/384 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 71 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 130
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| | ||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 131 gctgaagagatcaagaatgttgcttcatctattgaaggtgttgaggctaaaatatggcag 190
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 191 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 250
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 251 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 310
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 311 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 370
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||| ||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 371 tggagtgagcaaagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 430
Query: 478 ggtggtggccaagagactacaccg 501
|| ||||| || ||||||||||||
Sbjct: 431 ggcggtggtcaggagactacaccg 454
>gb|CF333898.1|CF333898 JMT--02-P18.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-P18, mRNA sequence
Length = 497
Score = 303 bits (153), Expect = 9e-080
Identities = 356/421 (84%), Gaps = 2/421 (0%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 77 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 136
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 137 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 196
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| |||| || |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 197 gttcctggaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 256
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 257 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 316
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 317 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 376
Query: 418 tggagggagcagag-cctcgctggcaagcctgccggcatgttcttcagcactggaaccca 476
||||| |||||||| ||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 377 tggagtgagcagagcccttgcaggcaagcccgccggcatcttcttcagcactggtaccca 436
Query: 477 -gggtggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggca 535
||| ||||| || |||||||||||| |||| || || || ||| |||| ||||||||||
Sbjct: 437 ggggcggtggtcaggagactacaccgttgacagcaataactcagttgactcaccacggca 496
Query: 536 t 536
|
Sbjct: 497 t 497
>gb|CV733008.1|CV733008 FLO--07-L20.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-L20,
mRNA sequence
Length = 529
Score = 303 bits (153), Expect = 9e-080
Identities = 330/389 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 122 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 181
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| | || ||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 182 gctgaatatattaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 241
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 242 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 301
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 302 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 361
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 362 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 421
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccag 477
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 422 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccag 481
Query: 478 ggtggtggccaagagactacaccgctgac 506
|| ||||| || |||||||||||| ||||
Sbjct: 482 ggcggtggtcaggagactacaccgttgac 510
>gb|CB673697.1|CB673697 OSJNEe08F18.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08F18 3', mRNA sequence
Length = 793
Score = 299 bits (151), Expect = 1e-078
Identities = 310/363 (85%)
Strand = Plus / Minus
Query: 370 atgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctctggagggagcag 429
|||||||| || |||||||| || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 785 atgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctgtggagtgagcag 726
Query: 430 agcctcgctggcaagcctgccggcatgttcttcagcactggaacccagggtggtggccaa 489
||||| || |||||||| |||||||| |||||||||||||| |||||||| ||||| ||
Sbjct: 725 agccttgcaggcaagcccgccggcatcttcttcagcactggtacccagggcggtggtcag 666
Query: 490 gagactacaccgctgacggcgattacccagctgacgcaccacggcatggtgtttgtgccc 549
|||||||||||| |||| || || || ||| |||| ||||||||||||||||| || ||
Sbjct: 665 gagactacaccgttgacagcaataactcagttgactcaccacggcatggtgttcgtcccg 606
Query: 550 gtgggctacaccttcggcgccaagctgttcggcatggaccaggtccagggtggcagcccc 609
|| || ||||||||||| |||||| |||| ||||| | || ||||| ||||||||
Sbjct: 605 gtcgggtacaccttcggtgccaagatgtttaacatgggagaagttcaggggggcagcccg 546
Query: 610 tacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgaggtggagctggag 669
|||||||||||||| || ||||||||||| ||||||||||||| || |||||||||||
Sbjct: 545 tacggcgccggcacctttgccgccgacggctcgaggtggccgacggaaatggagctggag 486
Query: 670 cacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctcaagggctctgct 729
|||||||||||||||||||| |||||||| |||||||| |||||||||||||| || |||
Sbjct: 485 cacgccttccaccaggggaagtacttcgcaggcatcgcgaagaagctcaaggggtccgct 426
Query: 730 tga 732
|||
Sbjct: 425 tga 423
>gb|CF292539.1|CF292539 30DGS--01-G10.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--01-G10, mRNA sequence
Length = 434
Score = 299 bits (151), Expect = 1e-078
Identities = 307/359 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 76 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 135
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 136 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 195
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 196 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 255
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 256 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 315
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 316 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 375
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccca 476
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| |||||
Sbjct: 376 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtaccca 434
>gb|CF336845.1|CF336845 JMT--07-A21.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--07-A21, mRNA sequence
Length = 452
Score = 293 bits (148), Expect = 9e-077
Identities = 301/352 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 101 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 160
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 161 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 220
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 221 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 280
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 281 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 340
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 341 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 400
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactg 469
||||| ||||||||||| || |||||||| |||||||| |||||||||||||
Sbjct: 401 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactg 452
>gb|CF319433.1|CF319433 HD--09-O23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-O23, mRNA sequence
Length = 423
Score = 266 bits (134), Expect = 2e-068
Identities = 302/358 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 66 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 125
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
|||| |||||||||| ||||| | |||| ||||||||||||||||||| ||||||||
Sbjct: 126 tctgaacagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcat 185
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| ||||||| ||
Sbjct: 186 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgccttctaagccagat 245
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 246 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 305
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 306 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 365
Query: 418 tggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||
Sbjct: 366 tggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtaccc 423
>gb|CF320215.1|CF320215 HD--11-A02.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-A02, mRNA sequence
Length = 419
Score = 264 bits (133), Expect = 8e-068
Identities = 280/329 (85%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 90 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 149
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 150 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 209
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 210 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 269
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 270 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 329
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 330 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 389
Query: 418 tggagggagcagagcctcgctggcaagcc 446
||||| ||||||||||| || ||||||||
Sbjct: 390 tggagtgagcagagccttgcaggcaagcc 418
>gb|CB685463.1|CB685463 OSJNEf15N20.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15N20 3', mRNA sequence
Length = 600
Score = 256 bits (129), Expect = 2e-065
Identities = 267/313 (85%)
Strand = Plus / Minus
Query: 420 gagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaacccaggg 479
||||||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 600 gagggagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtacccaggg 541
Query: 480 tggtggccaagagactacaccgctgacggcgattacccagctgacgcaccacggcatggt 539
||||| || |||||| ||||| || | || || || ||| |||| ||||||||||||||
Sbjct: 540 cggtggtcaggagactccaccgttgtcagcaatgactcagttgactcaccacggcatggt 481
Query: 540 gtttgtgcccgtgggctacaccttcggcgccaagctgttcggcatggaccaggtccaggg 599
||| || || || || ||||||||||| |||||| |||| ||||| | || |||||
Sbjct: 480 gttcgtcccggtcgggtacaccttcggtgccaagatgtttaacatgggagaagttcaggg 421
Query: 600 tggcagcccctacggcgccggcacgttcgccgccgacgggtcgaggtggccgagcgaggt 659
|||||||| |||||||||||||| || ||||||||||| ||||||||||||| || |
Sbjct: 420 gggcagcccgtacggcgccggcacctttgccgccgacggctcgaggtggccgacggaaat 361
Query: 660 ggagctggagcacgccttccaccaggggaaatacttcgcgggcatcgccaagaagctcaa 719
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 360 ggagctggagcacgccttccaccaggggaagtacttcgcaggcatcgcgaagaagctcaa 301
Query: 720 gggctctgcttga 732
||| || ||||||
Sbjct: 300 ggggtccgcttga 288
>gb|CF320352.1|CF320352 HD--11-D12.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-D12, mRNA sequence
Length = 386
Score = 234 bits (118), Expect = 7e-059
Identities = 262/310 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
|||| |||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 77 ccaacggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 136
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| ||||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 137 gctgaagagatcaagaagggtgcttcatctattgaaggtgttgaggctaaaatatggcag 196
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 197 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 256
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 257 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 316
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggctc 417
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| ||
Sbjct: 317 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcctg 376
Query: 418 tggagggagc 427
||||| ||||
Sbjct: 377 tggagtgagc 386
>gb|CF320834.1|CF320834 HD--11-N21.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-N21, mRNA sequence
Length = 368
Score = 224 bits (113), Expect = 7e-056
Identities = 248/293 (84%)
Strand = Plus / Plus
Query: 118 ccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaacta 177
||||||||||| ||| |||| || |||||||| || |||||||| ||||||| ||||||
Sbjct: 76 ccaatggcggtgaaggtctatgtcgtgtactactctatgtatggacatgttgctaaacta 135
Query: 178 gctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatggcag 237
||||| |||||||||| ||||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 136 gctgaagagatcaagattggtgcttcatctattgaaggtgttgaggctaaaatatggcag 195
Query: 238 gtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccgac 297
|| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 196 gttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccagat 255
Query: 298 gtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttccg 357
|||||| |||||||| || |||||| | |||||||| || ||||| |||||||| ||
Sbjct: 256 gtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttccct 315
Query: 358 acaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccgg 410
|||||||| || |||||||| || |||||||| || ||||| ||||| |||||
Sbjct: 316 acaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccgg 368
>gb|AU183981.1|AU183981 AU183981 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0312, mRNA sequence
Length = 442
Score = 218 bits (110), Expect = 4e-054
Identities = 274/329 (83%)
Strand = Plus / Plus
Query: 115 tctccaatggcggttaagatctacgttgtgtactattccatgtatgggcatgttggcaaa 174
|||||||||||||| ||| ||||||| ||||| || || |||||||| ||||| | ||||
Sbjct: 83 tctccaatggcggtcaaggtctacgtcgtgtattactctatgtatggtcatgtcgccaaa 142
Query: 175 ctagctgacgagatcaagaaaggtgccttatctgttgaaggtgttgaggctaagatatgg 234
|||||||| ||||||||||||||||| | |||||| ||||| || || | ||| ||||||
Sbjct: 143 ctagctgaggagatcaagaaaggtgcttcatctgtcgaaggcgtggaagttaaaatatgg 202
Query: 235 caggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagccc 294
||||||||||||| ||||| || || ||||| || |||||||||||||| || | | |
Sbjct: 203 caggtccctgaaaccctctcagaggaggtgctgggcaagatgggcgcgccgccgaggagc 262
Query: 295 gacgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggttt 354
|||| ||| || ||| | |||||||| || || ||||| ||||| |||| || |||||
Sbjct: 263 gacgcgccggtgatcgcgccgcaggagctcgcggaggccgacggcgtcctgttcgggttc 322
Query: 355 ccgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtggg 414
||||| |||||||| |||||||| || |||||||||||||||||||| |||||||| ||
Sbjct: 323 ccgacgaggttcggcatgatggcggcgcagatgaaggcgttcttcgacgccaccggcggn 382
Query: 415 ctctggagggagcagagcctcgctggcaa 443
|| ||| | |||||||||||||| |||||
Sbjct: 383 ctgtggcgcgagcagagcctcgccggcaa 411
>gb|AU183982.1|AU183982 AU183982 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0312, mRNA sequence
Length = 451
Score = 214 bits (108), Expect = 7e-053
Identities = 184/208 (88%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 517 cagctgacgcaccacggcatggtgtttgtgcccgt-gggctacaccttcggcgccaagct 575
|||||| ||||||||||||||||||| || || || ||||||||| |||||||||||| |
Sbjct: 4 cagctggcgcaccacggcatggtgttcgtcccggtcgggctacacgttcggcgccaagat 63
Query: 576 gttcggcatggaccaggtccagggtggcagcccctacggcgccggcacgttcgccgccga 635
||||| ||||| ||| || || |||||||| |||||||||||||||||||||| |||
Sbjct: 64 gttcgacatggcggcggtgcacggcggcagcccgtacggcgccggcacgttcgccggcga 123
Query: 636 cgggtcgaggtggccgagcgaggtggagctggagcacgccttccaccaggggaaatactt 695
|||||||||||||||| |||| ||||||||||||||||||||||||||| || |||||
Sbjct: 124 cgggtcgaggtggccgtcggaggcggagctggagcacgccttccaccagggcaagtactt 183
Query: 696 cgcgggcatcgccaagaagctcaagggc 723
||| ||||||||||||||||||||||||
Sbjct: 184 cgctggcatcgccaagaagctcaagggc 211
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1070A12
Length = 148449
Score = 210 bits (106), Expect = 1e-051
Identities = 226/266 (84%)
Strand = Plus / Plus
Query: 236 aggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccg 295
|||| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| |
Sbjct: 53923 aggttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccag 53982
Query: 296 acgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttc 355
| |||||| |||||||| || |||||| | |||||||| || ||||| |||||||| |
Sbjct: 53983 atgtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttcc 54042
Query: 356 cgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggc 415
| |||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| |
Sbjct: 54043 ctacaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcc 54102
Query: 416 tctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
| ||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||
Sbjct: 54103 tgtggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtaccc 54162
Query: 476 agggtggtggccaagagactacaccg 501
|||| ||||| || ||||||||||||
Sbjct: 54163 agggcggtggtcaggagactacaccg 54188
Score = 182 bits (92), Expect = 2e-043
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 521 tgacgcaccacggcatggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcg 580
|||| ||||||||||||||||| || || || || ||||||||||| |||||| ||||
Sbjct: 54316 tgactcaccacggcatggtgttcgtcccggtcgggtacaccttcggtgccaagatgttta 54375
Query: 581 gcatggaccaggtccagggtggcagcccctacggcgccggcacgttcgccgccgacgggt 640
||||| | || ||||| |||||||| |||||||||||||| || ||||||||||| |
Sbjct: 54376 acatgggagaagttcaggggggcagcccgtacggcgccggcacctttgccgccgacggct 54435
Query: 641 cgaggtggccgagcgaggtggagctggagcacgccttccaccaggggaaatacttcgcgg 700
|||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 54436 cgaggtggccgacggaaatggagctggagcacgccttccaccaggggaagtacttcgcag 54495
Query: 701 gcatcgccaagaagctcaagggctctgcttga 732
||||||| |||||||||||||| || ||||||
Sbjct: 54496 gcatcgcgaagaagctcaaggggtccgcttga 54527
Score = 103 bits (52), Expect = 2e-019
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 144 gtactattccatgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgcctt 203
|||||| || |||||||| ||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 53058 gtactactctatgtatggacatgttgctaaactagctgaagagatcaagaagggtgcttc 53117
Query: 204 atctgttgaaggtgttgaggctaagatatggcaggt 239
|||| ||||||||||||||||||| |||||||||||
Sbjct: 53118 atctattgaaggtgttgaggctaaaatatggcaggt 53153
>gb|AACV01002465.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002465, whole
genome shotgun sequence
Length = 57069
Score = 210 bits (106), Expect = 1e-051
Identities = 226/266 (84%)
Strand = Plus / Plus
Query: 236 aggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccg 295
|||| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| |
Sbjct: 30382 aggttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccag 30441
Query: 296 acgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttc 355
| |||||| |||||||| || |||||| | |||||||| || ||||| |||||||| |
Sbjct: 30442 atgtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttcc 30501
Query: 356 cgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggc 415
| |||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| |
Sbjct: 30502 ctacaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcc 30561
Query: 416 tctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
| ||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||
Sbjct: 30562 tgtggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtaccc 30621
Query: 476 agggtggtggccaagagactacaccg 501
|||| ||||| || ||||||||||||
Sbjct: 30622 agggcggtggtcaggagactacaccg 30647
Score = 182 bits (92), Expect = 2e-043
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 521 tgacgcaccacggcatggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcg 580
|||| ||||||||||||||||| || || || || ||||||||||| |||||| ||||
Sbjct: 30775 tgactcaccacggcatggtgttcgtcccggtcgggtacaccttcggtgccaagatgttta 30834
Query: 581 gcatggaccaggtccagggtggcagcccctacggcgccggcacgttcgccgccgacgggt 640
||||| | || ||||| |||||||| |||||||||||||| || ||||||||||| |
Sbjct: 30835 acatgggagaagttcaggggggcagcccgtacggcgccggcacctttgccgccgacggct 30894
Query: 641 cgaggtggccgagcgaggtggagctggagcacgccttccaccaggggaaatacttcgcgg 700
|||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 30895 cgaggtggccgacggaaatggagctggagcacgccttccaccaggggaagtacttcgcag 30954
Query: 701 gcatcgccaagaagctcaagggctctgcttga 732
||||||| |||||||||||||| || ||||||
Sbjct: 30955 gcatcgcgaagaagctcaaggggtccgcttga 30986
Score = 103 bits (52), Expect = 2e-019
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 144 gtactattccatgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgcctt 203
|||||| || |||||||| ||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 29517 gtactactctatgtatggacatgttgctaaactagctgaagagatcaagaagggtgcttc 29576
Query: 204 atctgttgaaggtgttgaggctaagatatggcaggt 239
|||| ||||||||||||||||||| |||||||||||
Sbjct: 29577 atctattgaaggtgttgaggctaaaatatggcaggt 29612
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 210 bits (106), Expect = 1e-051
Identities = 226/266 (84%)
Strand = Plus / Plus
Query: 236 aggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccg 295
|||| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| |
Sbjct: 33341346 aggttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccag 33341405
Query: 296 acgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttc 355
| |||||| |||||||| || |||||| | |||||||| || ||||| |||||||| |
Sbjct: 33341406 atgtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttcc 33341465
Query: 356 cgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggc 415
| |||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| |
Sbjct: 33341466 ctacaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcc 33341525
Query: 416 tctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
| ||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||
Sbjct: 33341526 tgtggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtaccc 33341585
Query: 476 agggtggtggccaagagactacaccg 501
|||| ||||| || ||||||||||||
Sbjct: 33341586 agggcggtggtcaggagactacaccg 33341611
Score = 182 bits (92), Expect = 2e-043
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 521 tgacgcaccacggcatggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcg 580
|||| ||||||||||||||||| || || || || ||||||||||| |||||| ||||
Sbjct: 33341739 tgactcaccacggcatggtgttcgtcccggtcgggtacaccttcggtgccaagatgttta 33341798
Query: 581 gcatggaccaggtccagggtggcagcccctacggcgccggcacgttcgccgccgacgggt 640
||||| | || ||||| |||||||| |||||||||||||| || ||||||||||| |
Sbjct: 33341799 acatgggagaagttcaggggggcagcccgtacggcgccggcacctttgccgccgacggct 33341858
Query: 641 cgaggtggccgagcgaggtggagctggagcacgccttccaccaggggaaatacttcgcgg 700
|||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 33341859 cgaggtggccgacggaaatggagctggagcacgccttccaccaggggaagtacttcgcag 33341918
Query: 701 gcatcgccaagaagctcaagggctctgcttga 732
||||||| |||||||||||||| || ||||||
Sbjct: 33341919 gcatcgcgaagaagctcaaggggtccgcttga 33341950
Score = 103 bits (52), Expect = 2e-019
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 144 gtactattccatgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgcctt 203
|||||| || |||||||| ||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 33340481 gtactactctatgtatggacatgttgctaaactagctgaagagatcaagaagggtgcttc 33340540
Query: 204 atctgttgaaggtgttgaggctaagatatggcaggt 239
|||| ||||||||||||||||||| |||||||||||
Sbjct: 33340541 atctattgaaggtgttgaggctaaaatatggcaggt 33340576
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 210 bits (106), Expect = 1e-051
Identities = 226/266 (84%)
Strand = Plus / Plus
Query: 236 aggtccctgaaattctctctgaagaagtgcttggaaagatgggcgcgccccctaagcccg 295
|||| ||||||| |||| ||| ||||| |||||||||||||||||||| |||||||| |
Sbjct: 7788729 aggttcctgaaactctccatgaggaagtacttggaaagatgggcgcgcctcctaagccag 7788788
Query: 296 acgtgccagtcatcacaccgcaggaacttgcagaggctgacggtatcctctttgggtttc 355
| |||||| |||||||| || |||||| | |||||||| || ||||| |||||||| |
Sbjct: 7788789 atgtgccaacgatcacaccacaagaacttactgaggctgatggaatcctgtttgggttcc 7788848
Query: 356 cgacaaggttcggaatgatggcagctcagatgaaggcgttcttcgatgccaccggtgggc 415
| |||||||| || |||||||| || |||||||| || ||||| ||||| |||||||| |
Sbjct: 7788849 ctacaaggtttggcatgatggctgcgcagatgaaagcattctttgatgcaaccggtggcc 7788908
Query: 416 tctggagggagcagagcctcgctggcaagcctgccggcatgttcttcagcactggaaccc 475
| ||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||
Sbjct: 7788909 tgtggagtgagcagagccttgcaggcaagcccgccggcatcttcttcagcactggtaccc 7788968
Query: 476 agggtggtggccaagagactacaccg 501
|||| ||||| || ||||||||||||
Sbjct: 7788969 agggcggtggtcaggagactacaccg 7788994
Score = 182 bits (92), Expect = 2e-043
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 521 tgacgcaccacggcatggtgtttgtgcccgtgggctacaccttcggcgccaagctgttcg 580
|||| ||||||||||||||||| || || || || ||||||||||| |||||| ||||
Sbjct: 7789122 tgactcaccacggcatggtgttcgtcccggtcgggtacaccttcggtgccaagatgttta 7789181
Query: 581 gcatggaccaggtccagggtggcagcccctacggcgccggcacgttcgccgccgacgggt 640
||||| | || ||||| |||||||| |||||||||||||| || ||||||||||| |
Sbjct: 7789182 acatgggagaagttcaggggggcagcccgtacggcgccggcacctttgccgccgacggct 7789241
Query: 641 cgaggtggccgagcgaggtggagctggagcacgccttccaccaggggaaatacttcgcgg 700
|||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 7789242 cgaggtggccgacggaaatggagctggagcacgccttccaccaggggaagtacttcgcag 7789301
Query: 701 gcatcgccaagaagctcaagggctctgcttga 732
||||||| |||||||||||||| || ||||||
Sbjct: 7789302 gcatcgcgaagaagctcaaggggtccgcttga 7789333
Score = 103 bits (52), Expect = 2e-019
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 144 gtactattccatgtatgggcatgttggcaaactagctgacgagatcaagaaaggtgcctt 203
|||||| || |||||||| ||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 7787864 gtactactctatgtatggacatgttgctaaactagctgaagagatcaagaagggtgcttc 7787923
Query: 204 atctgttgaaggtgttgaggctaagatatggcaggt 239
|||| ||||||||||||||||||| |||||||||||
Sbjct: 7787924 atctattgaaggtgttgaggctaaaatatggcaggt 7787959
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,190,778
Number of Sequences: 438736
Number of extensions: 1190778
Number of successful extensions: 8035
Number of sequences better than 0.5: 111
Number of HSP's better than 0.5 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7417
Number of HSP's gapped (non-prelim): 569
length of query: 964
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 943
effective length of database: 2,791,206,460
effective search space: 2632107691780
effective search space used: 2632107691780
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)