BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437739.2.1
(574 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB636497.1|CB636497 OSJNEa02B04.r OSJNEa Oryza sativa (j... 291 2e-076
gb|CB644894.1|CB644894 OSJNEb06E21.r OSJNEb Oryza sativa (j... 291 2e-076
gb|CB649996.1|CB649996 OSJNEb14D15.f OSJNEb Oryza sativa (j... 291 2e-076
gb|CB650134.1|CB650134 OSJNEb14G17.r OSJNEb Oryza sativa (j... 291 2e-076
gb|CB651878.1|CB651878 OSJNEc01A18.r OSJNEc Oryza sativa (j... 291 2e-076
gb|CB652522.1|CB652522 OSJNEc02J08.r OSJNEc Oryza sativa (j... 291 2e-076
gb|CB657691.1|CB657691 OSJNEc13D14.r OSJNEc Oryza sativa (j... 291 2e-076
gb|CB665164.1|CB665164 OSJNEd11F15.r OSJNEd Oryza sativa (j... 291 2e-076
gb|CB665210.1|CB665210 OSJNEd11H02.r OSJNEd Oryza sativa (j... 291 2e-076
gb|CB671228.1|CB671228 OSJNEe04L08.r OSJNEe Oryza sativa (j... 291 2e-076
gb|CB675691.1|CB675691 OSJNEe11J06.r OSJNEe Oryza sativa (j... 291 2e-076
gb|CB684640.1|CB684640 OSJNEf14F24.f OSJNEf Oryza sativa (j... 291 2e-076
gb|CB684641.1|CB684641 OSJNEf14F24.r OSJNEf Oryza sativa (j... 291 2e-076
dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA... 291 2e-076
gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 ... 291 2e-076
gb|AACV01007925.1| Oryza sativa (japonica cultivar-group) c... 291 2e-076
ref|XM_469757.1| Oryza sativa (japonica cultivar-group), mRNA 291 2e-076
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 291 2e-076
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 291 2e-076
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 291 2e-076
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 291 2e-076
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 291 2e-076
gb|CB636039.1|CB636039 OSJNEa01B10.r OSJNEa Oryza sativa (j... 276 1e-071
gb|CB636788.1|CB636788 OSJNEa02K17.r OSJNEa Oryza sativa (j... 276 1e-071
gb|CB668956.1|CB668956 OSJNEe01B12.r OSJNEe Oryza sativa (j... 276 1e-071
gb|CB685005.1|CB685005 OSJNEf15A23.r OSJNEf Oryza sativa (j... 252 2e-064
gb|CB678339.1|CB678339 OSJNEe16C22.r OSJNEe Oryza sativa (j... 244 4e-062
gb|AU166147.1|AU166147 AU166147 Rice panicle shorter than 3... 192 1e-046
gb|AU058072.1|AU058072 AU058072 Rice panicle (longer than 1... 176 9e-042
gb|AU162527.1|AU162527 AU162527 Rice root Oryza sativa (jap... 174 3e-041
gb|AU182703.1|AU182703 AU182703 Rice panicle (longer than 1... 168 2e-039
gb|C99496.1|C99496 C99496 Rice panicle (longer than 10cm) O... 161 5e-037
gb|CB636955.1|CB636955 OSJNEa02P18.r OSJNEa Oryza sativa (j... 161 5e-037
gb|CB642480.1|CB642480 OSJNEb02K22.r OSJNEb Oryza sativa (j... 161 5e-037
gb|CB646200.1|CB646200 OSJNEb08H23.r OSJNEb Oryza sativa (j... 161 5e-037
gb|CB648770.1|CB648770 OSJNEb12F08.r OSJNEb Oryza sativa (j... 161 5e-037
gb|CB652579.1|CB652579 OSJNEc02L19.r OSJNEc Oryza sativa (j... 161 5e-037
gb|CB656656.1|CB656656 OSJNEc11E04.r OSJNEc Oryza sativa (j... 161 5e-037
gb|CB659452.1|CB659452 OSJNEc16H10.r OSJNEc Oryza sativa (j... 161 5e-037
gb|CB659753.1|CB659753 OSJNEc16P21.r OSJNEc Oryza sativa (j... 161 5e-037
gb|CB663055.1|CB663055 OSJNEd07J16.r OSJNEd Oryza sativa (j... 161 5e-037
gb|CB663228.1|CB663228 OSJNEd07P02.r OSJNEd Oryza sativa (j... 161 5e-037
gb|CB669961.1|CB669961 OSJNEe02M18.r OSJNEe Oryza sativa (j... 161 5e-037
gb|CB670786.1|CB670786 OSJNEe04A20.r OSJNEe Oryza sativa (j... 161 5e-037
gb|CB671680.1|CB671680 OSJNEe05F22.r OSJNEe Oryza sativa (j... 161 5e-037
gb|CB673526.1|CB673526 OSJNEe08B14.r OSJNEe Oryza sativa (j... 161 5e-037
gb|CB673565.1|CB673565 OSJNEe08C11.r OSJNEe Oryza sativa (j... 161 5e-037
gb|CB674123.1|CB674123 OSJNEe09A11.r OSJNEe Oryza sativa (j... 161 5e-037
gb|CB677342.1|CB677342 OSJNEe14C20.r OSJNEe Oryza sativa (j... 161 5e-037
gb|CB684053.1|CB684053 OSJNEf13D07.r OSJNEf Oryza sativa (j... 161 5e-037
gb|CB684195.1|CB684195 OSJNEf13H13.r OSJNEf Oryza sativa (j... 161 5e-037
gb|CB684279.1|CB684279 OSJNEf13K02.f OSJNEf Oryza sativa (j... 161 5e-037
gb|CB684280.1|CB684280 OSJNEf13K02.r OSJNEf Oryza sativa (j... 161 5e-037
gb|CF325398.1|CF325398 JMT1--03-C04.g1 AtJMT-overexpressing... 161 5e-037
dbj|AK062147.1| Oryza sativa (japonica cultivar-group) cDNA... 161 5e-037
dbj|AK065044.1| Oryza sativa (japonica cultivar-group) cDNA... 161 5e-037
dbj|AK119203.1| Oryza sativa (japonica cultivar-group) cDNA... 161 5e-037
dbj|AK122100.1| Oryza sativa (japonica cultivar-group) cDNA... 161 5e-037
gb|AACV01007922.1| Oryza sativa (japonica cultivar-group) c... 161 5e-037
ref|XM_469751.1| Oryza sativa (japonica cultivar-group), mRNA 161 5e-037
gb|CB666061.1|CB666061 OSJNEd12M15.r OSJNEd Oryza sativa (j... 153 1e-034
gb|CB679071.1|CB679071 OSJNEf02C02.r OSJNEf Oryza sativa (j... 153 1e-034
gb|AU071210.1|AU071210 AU071210 Rice cDNA from young root O... 149 2e-033
gb|AU071188.1|AU071188 AU071188 Rice cDNA from young root O... 147 8e-033
gb|CB648774.1|CB648774 OSJNEb12F10.r OSJNEb Oryza sativa (j... 145 3e-032
dbj|AP004077.1| Oryza sativa (japonica cultivar-group) chro... 141 5e-031
gb|AACV01003273.1| Oryza sativa (japonica cultivar-group) c... 141 5e-031
ref|XM_464008.1| Oryza sativa (japonica cultivar-group), mRNA 141 5e-031
dbj|AP004150.2| Oryza sativa (japonica cultivar-group) geno... 141 5e-031
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 141 5e-031
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 141 5e-031
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 141 5e-031
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 141 5e-031
gb|CB650029.1|CB650029 OSJNEb14E11.r OSJNEb Oryza sativa (j... 133 1e-028
gb|CB666744.1|CB666744 OSJNEd13M06.r OSJNEd Oryza sativa (j... 133 1e-028
gb|AU071047.1|AU071047 AU071047 Rice cDNA from young root O... 127 7e-027
gb|CB662684.1|CB662684 OSJNEd06O20.f OSJNEd Oryza sativa (j... 117 7e-024
gb|CB662685.1|CB662685 OSJNEd06O20.r OSJNEd Oryza sativa (j... 115 3e-023
dbj|AK072485.1| Oryza sativa (japonica cultivar-group) cDNA... 113 1e-022
gb|AACV01007921.1| Oryza sativa (japonica cultivar-group) c... 113 1e-022
ref|XM_469750.1| Oryza sativa (japonica cultivar-group), mRNA 113 1e-022
gb|AU031166.1|AU031166 AU031166 Rice cDNA from immature lea... 109 2e-021
gb|CB658489.1|CB658489 OSJNEc14I20.r OSJNEc Oryza sativa (j... 101 4e-019
gb|C98630.1|C98630 C98630 Rice panicle at flowering stage O... 100 2e-018
gb|CB650697.1|CB650697 OSJNEb15E18.r OSJNEb Oryza sativa (j... 94 1e-016
gb|CB638010.1|CB638010 OSJNEa05L22.r OSJNEa Oryza sativa (j... 92 4e-016
gb|CF276347.1|CF276347 14ETL--01-H11.g1 Rice etiolated leaf... 92 4e-016
gb|CB664948.1|CB664948 OSJNEd10P11.r OSJNEd Oryza sativa (j... 64 9e-008
gb|AU097046.1|AU097046 AU097046 Rice shoot Oryza sativa (ja... 60 1e-006
gb|AU163219.1|AU163219 AU163219 Rice shoot Oryza sativa (ja... 60 1e-006
gb|AU197618.1|AU197618 AU197618 Rice root Oryza sativa (jap... 60 1e-006
gb|AU222974.1|AU222974 AU222974 Rice shoot Oryza sativa (ja... 60 1e-006
gb|AU223127.1|AU223127 AU223127 Rice shoot Oryza sativa (ja... 60 1e-006
gb|AU223207.1|AU223207 AU223207 Rice shoot Oryza sativa (ja... 60 1e-006
gb|CB657134.1|CB657134 OSJNEc12D20.f OSJNEc Oryza sativa (j... 60 1e-006
gb|CF308942.1|CF308942 ABF--02-P04.b1 ABF3-overexpressing t... 60 1e-006
gb|AU108345.2|AU108345 AU108345 Rice shoot Oryza sativa (ja... 60 1e-006
gb|CF306152.1|CF306152 HDA1--02-N12.g1 OsHDAC1-overexpressi... 56 2e-005
dbj|AK066300.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
gb|AACV01002428.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
ref|NM_191428.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 56 2e-005
dbj|AP003106.1| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
dbj|AP003295.4| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
gb|CB638970.1|CB638970 OSJNEa08A11.r OSJNEa Oryza sativa (j... 48 0.005
>gb|CB636497.1|CB636497 OSJNEa02B04.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02B04 3', mRNA sequence
Length = 560
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 506 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 447
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 446 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 387
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 386 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 327
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 326 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 267
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 266 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 207
Query: 305 tcaccac 311
|||||||
Sbjct: 206 tcaccac 200
>gb|CB644894.1|CB644894 OSJNEb06E21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06E21 3', mRNA sequence
Length = 802
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 497 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 438
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 437 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 378
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 377 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 318
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 317 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 258
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 257 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 198
Query: 305 tcaccac 311
|||||||
Sbjct: 197 tcaccac 191
>gb|CB649996.1|CB649996 OSJNEb14D15.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14D15 5', mRNA sequence
Length = 811
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 329 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 270
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 269 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 210
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 209 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 150
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 149 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 90
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 89 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 30
Query: 305 tcaccac 311
|||||||
Sbjct: 29 tcaccac 23
>gb|CB650134.1|CB650134 OSJNEb14G17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14G17 3', mRNA sequence
Length = 736
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 497 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 438
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 437 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 378
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 377 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 318
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 317 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 258
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 257 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 198
Query: 305 tcaccac 311
|||||||
Sbjct: 197 tcaccac 191
>gb|CB651878.1|CB651878 OSJNEc01A18.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc01A18 3', mRNA sequence
Length = 823
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 418 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 359
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 358 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 299
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 298 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 239
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 238 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 179
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 178 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 119
Query: 305 tcaccac 311
|||||||
Sbjct: 118 tcaccac 112
>gb|CB652522.1|CB652522 OSJNEc02J08.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02J08 3', mRNA sequence
Length = 819
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 426 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 367
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 366 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 307
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 306 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 247
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 246 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 187
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 186 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 127
Query: 305 tcaccac 311
|||||||
Sbjct: 126 tcaccac 120
>gb|CB657691.1|CB657691 OSJNEc13D14.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13D14 3', mRNA sequence
Length = 821
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 413 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 354
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 353 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 294
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 293 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 234
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 233 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 174
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 173 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 114
Query: 305 tcaccac 311
|||||||
Sbjct: 113 tcaccac 107
>gb|CB665164.1|CB665164 OSJNEd11F15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11F15 3', mRNA sequence
Length = 790
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 485 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 426
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 425 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 366
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 365 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 306
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 305 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 246
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 245 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 186
Query: 305 tcaccac 311
|||||||
Sbjct: 185 tcaccac 179
>gb|CB665210.1|CB665210 OSJNEd11H02.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11H02 3', mRNA sequence
Length = 807
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 552 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 493
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 492 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 433
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 432 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 373
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 372 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 313
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 312 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 253
Query: 305 tcaccac 311
|||||||
Sbjct: 252 tcaccac 246
>gb|CB671228.1|CB671228 OSJNEe04L08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04L08 3', mRNA sequence
Length = 771
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 482 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 423
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 422 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 363
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 362 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 303
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 302 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 243
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 242 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 183
Query: 305 tcaccac 311
|||||||
Sbjct: 182 tcaccac 176
>gb|CB675691.1|CB675691 OSJNEe11J06.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11J06 3', mRNA sequence
Length = 775
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 376 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 317
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 316 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 257
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 256 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 197
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 196 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 137
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 136 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 77
Query: 305 tcaccac 311
|||||||
Sbjct: 76 tcaccac 70
>gb|CB684640.1|CB684640 OSJNEf14F24.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14F24 5', mRNA sequence
Length = 774
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 288 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 347
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 348 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 407
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 408 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 467
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 468 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 527
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 528 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 587
Query: 305 tcaccac 311
|||||||
Sbjct: 588 tcaccac 594
>gb|CB684641.1|CB684641 OSJNEf14F24.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14F24 3', mRNA sequence
Length = 814
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 540 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 481
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 480 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 421
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 420 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 361
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 360 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 301
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 300 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 241
Query: 305 tcaccac 311
|||||||
Sbjct: 240 tcaccac 234
>dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H22, full
insert sequence
Length = 2424
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 1922 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 1981
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 1982 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 2041
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 2042 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 2101
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 2102 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 2161
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 2162 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 2221
Query: 305 tcaccac 311
|||||||
Sbjct: 2222 tcaccac 2228
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
sequence
Length = 139872
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 126564 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 126623
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 126624 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 126683
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 126684 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 126743
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 126744 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 126803
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 126804 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 126863
Query: 305 tcaccac 311
|||||||
Sbjct: 126864 tcaccac 126870
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Plus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 95985 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 96044
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 96045 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 96104
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 96105 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 96164
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 96165 ccacgcagg 96173
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 163 ggccagggcatcaccgacgtgctcttcggggactacggcttcacggggacgctgccgcgg 222
||||| ||| || |||||||||| |||||||| |||||||||| || | |||||| ||
Sbjct: 76896 ggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgt 76955
Query: 223 acgtggttcaagtcggtggaccagctgccgatgaactacggcgacgagcactacgacccg 282
|| |||||||| ||||||||||||||||||||||| | ||||||| |||| ||| |||||
Sbjct: 76956 acttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccg 77015
Query: 283 ctgttcccgctcgggttcgggctcaccac 311
|||||||| | |||||||| || |||||
Sbjct: 77016 ctgttcccatttgggttcggactaaccac 77044
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 95862 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 95911
>gb|AACV01007925.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007925, whole
genome shotgun sequence
Length = 13753
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 10541 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 10482
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 10481 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 10422
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 10421 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 10362
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 10361 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 10302
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 10301 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 10242
Query: 305 tcaccac 311
|||||||
Sbjct: 10241 tcaccac 10235
>ref|XM_469757.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2192
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 1709 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 1768
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 1769 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 1828
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 1829 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 1888
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 1889 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 1948
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 1949 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 2008
Query: 305 tcaccac 311
|||||||
Sbjct: 2009 tcaccac 2015
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 3901494 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 3901553
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 3901554 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 3901613
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 3901614 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 3901673
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 3901674 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 3901733
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 3901734 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 3901793
Query: 305 tcaccac 311
|||||||
Sbjct: 3901794 tcaccac 3901800
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Plus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 3870915 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 3870974
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 3870975 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 3871034
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 3871035 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 3871094
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 3871095 ccacgcagg 3871103
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 163 ggccagggcatcaccgacgtgctcttcggggactacggcttcacggggacgctgccgcgg 222
||||| ||| || |||||||||| |||||||| |||||||||| || | |||||| ||
Sbjct: 3851826 ggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgt 3851885
Query: 223 acgtggttcaagtcggtggaccagctgccgatgaactacggcgacgagcactacgacccg 282
|| |||||||| ||||||||||||||||||||||| | ||||||| |||| ||| |||||
Sbjct: 3851886 acttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccg 3851945
Query: 283 ctgttcccgctcgggttcgggctcaccac 311
|||||||| | |||||||| || |||||
Sbjct: 3851946 ctgttcccatttgggttcggactaaccac 3851974
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3870792 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 3870841
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 4253042 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 4253101
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 4253102 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 4253161
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 4253162 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 4253221
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 4253222 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 4253281
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 4253282 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 4253341
Query: 305 tcaccac 311
|||||||
Sbjct: 4253342 tcaccac 4253348
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Plus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 4231226 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 4231285
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 4231286 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 4231345
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 4231346 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 4231405
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 4231406 ccacgcagg 4231414
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 163 ggccagggcatcaccgacgtgctcttcggggactacggcttcacggggacgctgccgcgg 222
||||| ||| || |||||||||| |||||||| |||||||||| || | |||||| ||
Sbjct: 4210149 ggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgt 4210208
Query: 223 acgtggttcaagtcggtggaccagctgccgatgaactacggcgacgagcactacgacccg 282
|| |||||||| ||||||||||||||||||||||| | ||||||| |||| ||| |||||
Sbjct: 4210209 acttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccg 4210268
Query: 283 ctgttcccgctcgggttcgggctcaccac 311
|||||||| | |||||||| || |||||
Sbjct: 4210269 ctgttcccatttgggttcggactaaccac 4210297
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4231103 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 4231152
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 31519205 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 31519264
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 31519265 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 31519324
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 31519325 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 31519384
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 31519385 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 31519444
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 31519445 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 31519504
Query: 305 tcaccac 311
|||||||
Sbjct: 31519505 tcaccac 31519511
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Plus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 31497389 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 31497448
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 31497449 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 31497508
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 31497509 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 31497568
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 31497569 ccacgcagg 31497577
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 163 ggccagggcatcaccgacgtgctcttcggggactacggcttcacggggacgctgccgcgg 222
||||| ||| || |||||||||| |||||||| |||||||||| || | |||||| ||
Sbjct: 31476312 ggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgt 31476371
Query: 223 acgtggttcaagtcggtggaccagctgccgatgaactacggcgacgagcactacgacccg 282
|| |||||||| ||||||||||||||||||||||| | ||||||| |||| ||| |||||
Sbjct: 31476372 acttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccg 31476431
Query: 283 ctgttcccgctcgggttcgggctcaccac 311
|||||||| | |||||||| || |||||
Sbjct: 31476432 ctgttcccatttgggttcggactaaccac 31476460
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 31497266 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 31497315
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 30686413 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 30686472
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 30686473 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 30686532
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 30686533 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 30686592
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 30686593 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 30686652
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 30686653 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 30686712
Query: 305 tcaccac 311
|||||||
Sbjct: 30686713 tcaccac 30686719
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Plus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 30655834 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 30655893
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 30655894 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 30655953
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 30655954 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 30656013
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 30656014 ccacgcagg 30656022
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 163 ggccagggcatcaccgacgtgctcttcggggactacggcttcacggggacgctgccgcgg 222
||||| ||| || |||||||||| |||||||| |||||||||| || | |||||| ||
Sbjct: 30636745 ggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgt 30636804
Query: 223 acgtggttcaagtcggtggaccagctgccgatgaactacggcgacgagcactacgacccg 282
|| |||||||| ||||||||||||||||||||||| | ||||||| |||| ||| |||||
Sbjct: 30636805 acttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccg 30636864
Query: 283 ctgttcccgctcgggttcgggctcaccac 311
|||||||| | |||||||| || |||||
Sbjct: 30636865 ctgttcccatttgggttcggactaaccac 30636893
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 30655711 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 30655760
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 291 bits (147), Expect = 2e-076
Identities = 267/307 (86%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 30594991 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 30595050
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 30595051 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 30595110
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 30595111 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 30595170
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 30595171 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 30595230
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 30595231 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 30595290
Query: 305 tcaccac 311
|||||||
Sbjct: 30595291 tcaccac 30595297
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Plus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 30564412 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 30564471
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 30564472 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 30564531
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 30564532 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 30564591
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 30564592 ccacgcagg 30564600
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 163 ggccagggcatcaccgacgtgctcttcggggactacggcttcacggggacgctgccgcgg 222
||||| ||| || |||||||||| |||||||| |||||||||| || | |||||| ||
Sbjct: 30545323 ggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgt 30545382
Query: 223 acgtggttcaagtcggtggaccagctgccgatgaactacggcgacgagcactacgacccg 282
|| |||||||| ||||||||||||||||||||||| | ||||||| |||| ||| |||||
Sbjct: 30545383 acttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccg 30545442
Query: 283 ctgttcccgctcgggttcgggctcaccac 311
|||||||| | |||||||| || |||||
Sbjct: 30545443 ctgttcccatttgggttcggactaaccac 30545471
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 30564289 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 30564338
>gb|CB636039.1|CB636039 OSJNEa01B10.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01B10 3', mRNA sequence
Length = 524
Score = 276 bits (139), Expect = 1e-071
Identities = 265/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 498 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 439
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||| ||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 438 agtgcgccacggtgttcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 379
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 378 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 319
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 318 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 259
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 258 agctgccgatgaaatacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 199
Query: 305 tcaccac 311
|||||||
Sbjct: 198 tcaccac 192
>gb|CB636788.1|CB636788 OSJNEa02K17.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02K17 3', mRNA sequence
Length = 539
Score = 276 bits (139), Expect = 1e-071
Identities = 265/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
||||| |||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 506 tgaacttgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 447
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||| ||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 446 agtgcgccacggtgttcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 387
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 386 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 327
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 326 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 267
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 266 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 207
Query: 305 tcaccac 311
|||||||
Sbjct: 206 tcaccac 200
>gb|CB668956.1|CB668956 OSJNEe01B12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01B12 3', mRNA sequence
Length = 766
Score = 276 bits (139), Expect = 1e-071
Identities = 265/307 (86%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 552 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 493
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||| ||||||||||||| || |||||| | |||||||| | ||| |
Sbjct: 492 agtgcgccacggtgttcatcagcggccggccggtggtggtgcagccgtttttgggcgcca 433
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 432 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 373
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 372 tgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggacc 313
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 312 agctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcc 253
Query: 305 tcaccac 311
|||||||
Sbjct: 252 tcaccac 246
>gb|CB685005.1|CB685005 OSJNEf15A23.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15A23 3', mRNA sequence
Length = 630
Score = 252 bits (127), Expect = 2e-064
Identities = 262/307 (85%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 371 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 312
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 311 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 252
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| | || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 251 tggacgcgctcgtcaccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 192
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||| | || | ||||||||||||||||||||||||||||| ||
Sbjct: 191 tgttcggcgactacgggttctccggcaagctgccgcggacgtggttcaagtcggtgggcc 132
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||| |
Sbjct: 131 agctgccgatgaactacggggacgcgcattacgacccgctgttcccgctcggattcggcc 72
Query: 305 tcaccac 311
|||||||
Sbjct: 71 tcaccac 65
>gb|CB678339.1|CB678339 OSJNEe16C22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe16C22 3', mRNA sequence
Length = 828
Score = 244 bits (123), Expect = 4e-062
Identities = 261/307 (85%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgcggcgccgtgc 64
|||||||||| |||||||| |||||||||||||| | |||||| |||||||||| ||
Sbjct: 459 tgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgc 400
Query: 65 cctgcgcgaccgtgctcatcagcggccgccccgtggtgatacagccgttccttggcactg 124
||||| || ||||||||||||||||| || |||||| | ||||||||| | ||| |
Sbjct: 399 agtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgcca 340
Query: 125 tgcacgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgc 184
|| |||||||||| || || ||||||||||| | ||| || |||||| ||||||||||||
Sbjct: 339 tggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgc 280
Query: 185 tcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggacc 244
| ||||| |||||||| ||| | || | | ||||||||||||||||||||||||||||||
Sbjct: 279 tgttcggcgactacgggttctccggcaagatgccgcggacgtggttcaagtcggtggacc 220
Query: 245 agctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggc 304
||||||||||||||||||| |||| |||||||| |||| |||||||| |||| ||||| |
Sbjct: 219 agctgccgatgaactacggggacgcgcactacgccccgatgttcccgatcggattcggcc 160
Query: 305 tcaccac 311
|||||||
Sbjct: 159 tcaccac 153
>gb|AU166147.1|AU166147 AU166147 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31970, mRNA sequence
Length = 389
Score = 192 bits (97), Expect = 1e-046
Identities = 133/146 (91%)
Strand = Plus / Plus
Query: 166 cagggcatcaccgacgtgctcttcggggactacggcttcacggggacgctgccgcggacg 225
|||||| ||||||||||||| ||||| || ||||| ||||| || | ||||| |||||||
Sbjct: 16 cagggcgtcaccgacgtgctgttcggcgantacgggttcaccggcaagctgcngcggacg 75
Query: 226 tggttcaagtcggtggaccagctgccgatgaactacggcgacgagcactacgacccgctg 285
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 76 tggttcaagtcggtggaccagctgccgatgaactacggcgacgcgcactacgacccgntg 135
Query: 286 ttcccgctcgggttcgggctcaccac 311
||||||||||| ||||| ||||||||
Sbjct: 136 ttcccgctcggattcggcctcaccac 161
>gb|AU058072.1|AU058072 AU058072 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E21085_1A, mRNA sequence
Length = 330
Score = 176 bits (89), Expect = 9e-042
Identities = 115/124 (92%)
Strand = Plus / Plus
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| || | |||||||||||||| ||||||||||||||||||||
Sbjct: 1 tcggcgactacgggttcaccggcaagctgccgcggacgtngttcaagtcggtggaccagc 60
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||
Sbjct: 61 tgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcctca 120
Query: 308 ccac 311
||||
Sbjct: 121 ccac 124
>gb|AU162527.1|AU162527 AU162527 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3810, mRNA sequence
Length = 344
Score = 174 bits (88), Expect = 3e-041
Identities = 121/133 (90%)
Strand = Plus / Plus
Query: 179 acgtgctcttcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcgg 238
||||||| ||||| || ||||| ||||| || | ||||||||||||||||||||||||||
Sbjct: 1 acgtgctgttcggcgantacgggttcaccggcaagctgccgcggacgtggttcaagtcgg 60
Query: 239 tggaccagctgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggt 298
|||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |
Sbjct: 61 tggaccagctgccgatganctacgncgacgcgcactacgacccgctgttcccgctcggat 120
Query: 299 tcgggctcaccac 311
|||| ||||||||
Sbjct: 121 tcggcctcaccac 133
>gb|AU182703.1|AU182703 AU182703 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E21027, mRNA sequence
Length = 311
Score = 168 bits (85), Expect = 2e-039
Identities = 116/125 (92%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| || | |||||||||||||||||||||||||||||||||||
Sbjct: 1 tcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggaccagc 60
Query: 248 tgccgatgaactac-ggcgacgagcactacgacccgctgttcccgctcgggttcgggctc 306
|||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||
Sbjct: 61 tgccgatgaactacnggcgacgcgcactacgacccgctgttcccgctcggattcggcctc 120
Query: 307 accac 311
|||||
Sbjct: 121 accac 125
>gb|C99496.1|C99496 C99496 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20244_6A, mRNA sequence
Length = 456
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Plus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 23 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 82
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 83 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 142
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 143 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 202
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 203 ccacgcagg 211
>gb|CB636955.1|CB636955 OSJNEa02P18.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02P18 3', mRNA sequence
Length = 544
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 454 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 395
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 394 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 335
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 334 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 275
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 274 ccacgcagg 266
>gb|CB642480.1|CB642480 OSJNEb02K22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb02K22 3', mRNA sequence
Length = 799
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 494 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 435
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 434 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 375
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 374 tgccgatgaacgtcggcgacgcgcactacgacccgcttttccccttcggctacggcctca 315
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 314 ccacgcagg 306
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 617 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 568
>gb|CB646200.1|CB646200 OSJNEb08H23.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08H23 3', mRNA sequence
Length = 760
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 444 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 385
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 384 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 325
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 324 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggttacggcctca 265
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 264 ccacgcagg 256
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 567 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 518
>gb|CB648770.1|CB648770 OSJNEb12F08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12F08 3', mRNA sequence
Length = 808
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 495 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 436
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 435 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 376
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 375 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 316
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 315 ccacgcagg 307
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 618 tgaacctgacgatcccggagcccggcccgacggtgatccagacggtgtgc 569
>gb|CB652579.1|CB652579 OSJNEc02L19.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02L19 3', mRNA sequence
Length = 817
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 446 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 387
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 386 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 327
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 326 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 267
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 266 ccacgcagg 258
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 569 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 520
>gb|CB656656.1|CB656656 OSJNEc11E04.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11E04 3', mRNA sequence
Length = 700
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 438 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 379
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 378 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 319
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 318 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 259
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 258 ccacgcagg 250
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 512
>gb|CB659452.1|CB659452 OSJNEc16H10.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16H10 3', mRNA sequence
Length = 796
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 450 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 391
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 390 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 331
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 330 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 271
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 270 ccacgcagg 262
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 573 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 524
>gb|CB659753.1|CB659753 OSJNEc16P21.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16P21 3', mRNA sequence
Length = 767
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 458 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 399
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 398 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 339
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 338 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 279
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 278 ccacgcagg 270
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 581 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 532
>gb|CB663055.1|CB663055 OSJNEd07J16.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07J16 3', mRNA sequence
Length = 807
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 440 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 381
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 380 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 321
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 320 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 261
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 260 ccacgcagg 252
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 563 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 514
>gb|CB663228.1|CB663228 OSJNEd07P02.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07P02 3', mRNA sequence
Length = 812
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 442 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 383
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 382 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 323
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 322 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 263
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 262 ccacgcagg 254
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 516
>gb|CB669961.1|CB669961 OSJNEe02M18.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02M18 3', mRNA sequence
Length = 854
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 489 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 430
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 429 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 370
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 369 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 310
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 309 ccacgcagg 301
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 612 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 563
>gb|CB670786.1|CB670786 OSJNEe04A20.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04A20 3', mRNA sequence
Length = 820
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 449 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 390
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 389 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 330
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 329 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 270
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 269 ccacgcagg 261
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 572 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 523
>gb|CB671680.1|CB671680 OSJNEe05F22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05F22 3', mRNA sequence
Length = 834
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 493 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 434
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 433 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 374
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 373 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 314
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 313 ccacgcagg 305
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 616 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 567
>gb|CB673526.1|CB673526 OSJNEe08B14.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08B14 3', mRNA sequence
Length = 749
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 359 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 300
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 299 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 240
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 239 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggttacggcctca 180
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 179 ccacgcagg 171
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 482 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 433
>gb|CB673565.1|CB673565 OSJNEe08C11.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08C11 3', mRNA sequence
Length = 793
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 438 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 379
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 378 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 319
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 318 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 259
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 258 ccacgcagg 250
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 512
>gb|CB674123.1|CB674123 OSJNEe09A11.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09A11 3', mRNA sequence
Length = 790
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 444 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 385
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 384 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 325
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 324 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 265
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 264 ccacgcagg 256
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 567 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 518
>gb|CB677342.1|CB677342 OSJNEe14C20.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe14C20 3', mRNA sequence
Length = 853
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 482 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 423
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 422 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 363
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 362 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 303
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 302 ccacgcagg 294
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 605 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 556
>gb|CB684053.1|CB684053 OSJNEf13D07.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf13D07 3', mRNA sequence
Length = 764
Score = 161 bits (81), Expect = 5e-037
Identities = 162/189 (85%)
Strand = Plus / Minus
Query: 128 acgcgctcgtggcggcctggctgccgggaagcgaaggccagggcatcaccgacgtgctct 187
||||| |||||||||| ||||||||||| | || || |||||| | |||||||||| |
Sbjct: 451 acgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgt 392
Query: 188 tcggggactacggcttcacggggacgctgccgcggacgtggttcaagtcggtggaccagc 247
|||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||
Sbjct: 391 tcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagc 332
Query: 248 tgccgatgaactacggcgacgagcactacgacccgctgttcccgctcgggttcgggctca 307
||||||||||| |||||||| ||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 331 tgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctca 272
Query: 308 ccacacagg 316
|||| ||||
Sbjct: 271 ccacgcagg 263
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 5 tgaacctgacgatcccggagcccgggccgagcaccatccagacggtgtgc 54
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 574 tgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgc 525
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 712,974
Number of Sequences: 438736
Number of extensions: 712974
Number of successful extensions: 16394
Number of sequences better than 0.5: 109
Number of HSP's better than 0.5 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15802
Number of HSP's gapped (non-prelim): 525
length of query: 574
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 553
effective length of database: 2,791,206,460
effective search space: 1543537172380
effective search space used: 1543537172380
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)