BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437629.2.1
(1264 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK061366.1| Oryza sativa (japonica cultivar-group) cDNA... 856 0.0
ref|NM_190765.1| Oryza sativa (japonica cultivar-group), p... 856 0.0
gb|CB685153.1|CB685153 OSJNEf15F10.f OSJNEf Oryza sativa (j... 848 0.0
gb|CB679715.1|CB679715 OSJNEf03J03.f OSJNEf Oryza sativa (j... 803 0.0
dbj|AK121441.1| Oryza sativa (japonica cultivar-group) cDNA... 720 0.0
dbj|AK059283.1| Oryza sativa (japonica cultivar-group) cDNA... 573 e-161
dbj|AK121867.1| Oryza sativa (japonica cultivar-group) cDNA... 573 e-161
ref|XM_475304.1| Oryza sativa (japonica cultivar-group), p... 573 e-161
gb|CF323560.1|CF323560 HDN--04-C19.g1 OsHDAC1-overexpressin... 456 e-125
gb|CB653924.1|CB653924 OSJNEc05G06.r OSJNEc Oryza sativa (j... 448 e-123
gb|CA999153.1|CA999153 S234N_C11 Rice cold stress germinati... 428 e-117
gb|CB653923.1|CB653923 OSJNEc05G06.f OSJNEc Oryza sativa (j... 379 e-102
gb|CF324134.1|CF324134 HDN--05-L13.g1 OsHDAC1-overexpressin... 367 1e-098
gb|CF309704.1|CF309704 ABF--03-P22.b1 ABF3-overexpressing t... 339 2e-090
gb|C97538.1|C97538 C97538 Rice callus Oryza sativa (japonic... 327 8e-087
gb|CF312469.1|CF312469 ABF--08-D23.g1 ABF3-overexpressing t... 313 1e-082
gb|C72626.1|C72626 C72626 Rice panicle at flowering stage O... 293 1e-076
gb|C99208.1|C99208 C99208 Rice panicle at ripening stage Or... 248 6e-063
gb|AACV01002753.1| Oryza sativa (japonica cultivar-group) c... 216 2e-053
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 216 2e-053
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 216 2e-053
dbj|AP003286.3| Oryza sativa (japonica cultivar-group) geno... 216 2e-053
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 216 2e-053
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 216 2e-053
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 216 2e-053
gb|AU077950.1|AU077950 AU077950 Rice callus Oryza sativa (j... 206 2e-050
gb|CF306693.1|CF306693 HDA1--04-J13.g1 OsHDAC1-overexpressi... 188 5e-045
gb|AU183277.1|AU183277 AU183277 Rice cDNA from immature lea... 178 5e-042
gb|C26744.1|C26744 C26744 Rice callus cDNA Oryza sativa (ja... 155 7e-035
gb|AACV01012264.1| Oryza sativa (japonica cultivar-group) c... 147 2e-032
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 147 2e-032
gb|AC105318.4| Oryza sativa (japonica cultivar-group) chrom... 147 2e-032
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 147 2e-032
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 147 2e-032
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 147 2e-032
gb|AU094034.1|AU094034 AU094034 Rice panicle at flowering s... 135 7e-029
gb|CF309705.1|CF309705 ABF--03-P22.g1 ABF3-overexpressing t... 129 4e-027
gb|C19452.1|C19452 C19452 Rice panicle at ripening stage Or... 127 2e-026
gb|CF326437.1|CF326437 JMT1--06-A24.g1 AtJMT-overexpressing... 101 9e-019
gb|C97539.1|C97539 C97539 Rice callus Oryza sativa (japonic... 98 1e-017
dbj|AK071119.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
gb|AACV01003836.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
dbj|AP005428.2| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 52 8e-004
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
gb|AU030027.1|AU030027 AU030027 Rice cDNA from immature lea... 48 0.012
gb|AU030028.1|AU030028 AU030028 Rice cDNA from immature lea... 48 0.012
dbj|AK059220.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.046
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.046
gb|AACV01012610.1| Oryza sativa (japonica cultivar-group) c... 46 0.046
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 46 0.046
gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNB... 44 0.18
gb|AACV01021773.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 44 0.18
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
>dbj|AK061366.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D06, full
insert sequence
Length = 1271
Score = 856 bits (432), Expect = 0.0
Identities = 618/680 (90%)
Strand = Plus / Minus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 894 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 835
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaatta 686
|| ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 834 tgtggcatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 775
Query: 687 ggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatagatgatttgtt 746
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 774 ggtcttattatctcctcagagttcaccagaaatatgtcaccaatgtaaagatgatttgtt 715
Query: 747 ggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggaccacagttgat 806
|||||||| || || ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 714 ggcacataaacgctgcacagttcttcgtcgcctttgtcagtctgaagaacaacagttgat 655
Query: 807 gttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttg 866
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 654 gttataaatccaaatgcatattcaccaatacgtggatgacgaattatcgcaacttcttta 595
Query: 867 aaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgatgctgaatat 926
||||| || || ||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 594 aaagctgttgtgttttgatctggtgaaatggcagtgctgacttgctttgatgcagagtat 535
Query: 927 atatgtcttacaaatggcattttctttataaaccactcgcccacccagaagatggttgaa 986
|| || | |||||||||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 534 atgtgccgaacaaatggcattttctttataaaccattctccaacccaaaagatggttgaa 475
Query: 987 ccaacccatgaagaaacaaatattccaaccagaaatatgaataccagagaagtcaaaaaa 1046
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 474 cccacccatgaggaaacaaatattccaaccagaaaaatgaataccagagaagtcagaaaa 415
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
|||||||||||||||||||| |||| |||||||||||| || |||||||| |||||||||
Sbjct: 414 ccaagaccaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaaca 355
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
||||||||||||||||||||||||||||||||||| ||||||||||| || || || |||
Sbjct: 354 aattgaataaaccaccatgtgatgaagaacgtgacagcaacaggaaacagaacgacgcat 295
Query: 1167 ccagtcataaactttcttgagacccaactttgaagaacagcacagcatgccttgcgtgtg 1226
||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 294 ccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgccttgcgggtg 235
Query: 1227 gaggtggtgggcgagctggg 1246
||||||||||||||||||||
Sbjct: 234 gaggtggtgggcgagctggg 215
>ref|NM_190765.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 780
Score = 856 bits (432), Expect = 0.0
Identities = 618/680 (90%)
Strand = Plus / Minus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 770 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 711
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaatta 686
|| ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 710 tgtggcatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 651
Query: 687 ggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatagatgatttgtt 746
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 650 ggtcttattatctcctcagagttcaccagaaatatgtcaccaatgtaaagatgatttgtt 591
Query: 747 ggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggaccacagttgat 806
|||||||| || || ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 590 ggcacataaacgctgcacagttcttcgtcgcctttgtcagtctgaagaacaacagttgat 531
Query: 807 gttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttg 866
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 530 gttataaatccaaatgcatattcaccaatacgtggatgacgaattatcgcaacttcttta 471
Query: 867 aaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgatgctgaatat 926
||||| || || ||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 470 aaagctgttgtgttttgatctggtgaaatggcagtgctgacttgctttgatgcagagtat 411
Query: 927 atatgtcttacaaatggcattttctttataaaccactcgcccacccagaagatggttgaa 986
|| || | |||||||||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 410 atgtgccgaacaaatggcattttctttataaaccattctccaacccaaaagatggttgaa 351
Query: 987 ccaacccatgaagaaacaaatattccaaccagaaatatgaataccagagaagtcaaaaaa 1046
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 350 cccacccatgaggaaacaaatattccaaccagaaaaatgaataccagagaagtcagaaaa 291
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
|||||||||||||||||||| |||| |||||||||||| || |||||||| |||||||||
Sbjct: 290 ccaagaccaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaaca 231
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
||||||||||||||||||||||||||||||||||| ||||||||||| || || || |||
Sbjct: 230 aattgaataaaccaccatgtgatgaagaacgtgacagcaacaggaaacagaacgacgcat 171
Query: 1167 ccagtcataaactttcttgagacccaactttgaagaacagcacagcatgccttgcgtgtg 1226
||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 170 ccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgccttgcgggtg 111
Query: 1227 gaggtggtgggcgagctggg 1246
||||||||||||||||||||
Sbjct: 110 gaggtggtgggcgagctggg 91
>gb|CB685153.1|CB685153 OSJNEf15F10.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15F10 5', mRNA sequence
Length = 758
Score = 848 bits (428), Expect = 0.0
Identities = 617/680 (90%)
Strand = Plus / Minus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| || |||| || || || || ||||||
Sbjct: 729 attctatttagacggatattctggctcttcctgggggtgggttcaagggacgcgatcacc 670
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaatta 686
|| ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 669 tgtggcatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 610
Query: 687 ggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatagatgatttgtt 746
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 609 ggtcttattatctcctcagagttcaccagaaatatgtcaccaatgtaaagatgatttgtt 550
Query: 747 ggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggaccacagttgat 806
|||||||| || || ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 549 ggcacataaacgctgcacagttcttcgtcgcctttgtcagtctgaagaacaacagttgat 490
Query: 807 gttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttg 866
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 489 gttataaatccaaatgcatattcaccaatacgtggatgacgaattatcgcaacttcttta 430
Query: 867 aaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgatgctgaatat 926
||||| || || ||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 429 aaagctgttgtgttttgatctggtgaaatggcagtgctgacttgctttgatgcagagtat 370
Query: 927 atatgtcttacaaatggcattttctttataaaccactcgcccacccagaagatggttgaa 986
|| || | |||||||||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 369 atgtgccgaacaaatggcattttctttataaaccattctccaacccaaaagatggttgaa 310
Query: 987 ccaacccatgaagaaacaaatattccaaccagaaatatgaataccagagaagtcaaaaaa 1046
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 309 cccacccatgaggaaacaaatattccaaccagaaaaatgaataccagagaagtcagaaaa 250
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
|||||||||||||||||||| |||| |||||||||||| || |||||||| |||||||||
Sbjct: 249 ccaagaccaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaaca 190
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
||||||||||||||||||||||||||||||||||| ||||||||||| || || || |||
Sbjct: 189 aattgaataaaccaccatgtgatgaagaacgtgacagcaacaggaaacagaacgacgcat 130
Query: 1167 ccagtcataaactttcttgagacccaactttgaagaacagcacagcatgccttgcgtgtg 1226
||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 129 ccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgccttgcgggtg 70
Query: 1227 gaggtggtgggcgagctggg 1246
||||||||||||||||||||
Sbjct: 69 gaggtggtgggcgagctggg 50
>gb|CB679715.1|CB679715 OSJNEf03J03.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03J03 5', mRNA sequence
Length = 807
Score = 803 bits (405), Expect = 0.0
Identities = 620/685 (90%), Gaps = 5/685 (0%)
Strand = Plus / Minus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 735 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 676
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaatta 686
|| ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 675 tgtggcatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 616
Query: 687 ggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatagatgatttgtt 746
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 615 ggtcttattatctcctcagagttcaccagaaatatgtcaccaatgtaaagatgatttgtt 556
Query: 747 ggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggaccacagttgat 806
|||||||| || || ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 555 ggcacataaacgctgcacagttcttcgtcgcctttgtcagtctgaagaacaacagttgat 496
Query: 807 gttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttg 866
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 495 gttataaatccaaatgcatattcaccaatacgtggatgacgaattatcgcaacttcttta 436
Query: 867 aaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgatgctgaatat 926
||||| || || ||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 435 aaagctgttgtgttttgatctggtgaaatggcagtgctgacttgctttgatgcagagtat 376
Query: 927 atatgtcttacaaatggcattttctttataaaccactcgcccacccagaagatggttgaa 986
|| || | |||||||||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 375 atgtgccgaacaaatggcattttctttataaaccattctccaacccaaaagatggttgaa 316
Query: 987 ccaacccatgaagaaacaaatattccaaccagaaatatgaataccagagaagtcaaaaaa 1046
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 315 cccacccatgaggaaacaaatattccaaccagaaaaatgaataccagagaagtcagaaaa 256
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
|||||||||||||||||||| |||| |||||||||||| || |||||||| |||||||||
Sbjct: 255 ccaagaccaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaaca 196
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
||||||||||||||||||||||||||||||||||| ||||||||||| || || || |||
Sbjct: 195 aattgaataaaccaccatgtgatgaagaacgtgacagcaacaggaaacagaacgacgcat 136
Query: 1167 ccagtcataaactttcttgagacccaactttgaagaacagca-ca-gcatg-ccttgcgt 1223
||||||||||| |||||||| ||||||||||||||||||||| || ||||| ||||||||
Sbjct: 135 ccagtcataaattttcttgacacccaactttgaagaacagcagcatgcatgcccttgcgt 76
Query: 1224 -gtggagg-tggtgggcgagctggg 1246
||||||| ||||||||||||||||
Sbjct: 75 ggtggaggntggtgggcgagctggg 51
>dbj|AK121441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140N15, full
insert sequence
Length = 2362
Score = 720 bits (363), Expect = 0.0
Identities = 531/587 (90%)
Strand = Plus / Minus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 1978 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 1919
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaatta 686
|| ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 1918 tgtggcatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 1859
Query: 687 ggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatagatgatttgtt 746
|||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1858 ggtcttattatctccccagagttcaccagaaatatgtcaccaatgtaaagatgatttgtt 1799
Query: 747 ggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggaccacagttgat 806
|||||||| || || ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 1798 ggcacataaacgctgcacagttcttcgtcgcctttgtcagtctgaagaacaacagttgat 1739
Query: 807 gttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttg 866
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 1738 gttataaatccaaatgcatattcaccaatacgtggatgacgaattatcgcaacttcttta 1679
Query: 867 aaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgatgctgaatat 926
||||| || || ||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 1678 aaagctgttgtgttttgatctggtgaaatggcagtgctgacttgctttgatgcagagtat 1619
Query: 927 atatgtcttacaaatggcattttctttataaaccactcgcccacccagaagatggttgaa 986
|| || | |||||||||||||||||||||||||| || || ||| | ||||||||||||
Sbjct: 1618 atgtgccgaacaaatggcattttctttataaaccattctccaaccaaaaagatggttgaa 1559
Query: 987 ccaacccatgaagaaacaaatattccaaccagaaatatgaataccagagaagtcaaaaaa 1046
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 1558 cccacccatgaggaaacaaatattccaaccagaaaaatgaataccagagaagtcagaaaa 1499
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
|||||||||||||||||||| |||| |||||||||||| || |||||||| |||||||||
Sbjct: 1498 ccaagaccaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaaca 1439
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1438 aattgaataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 1392
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 1291 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 1237
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 233 ccttgcgggtggaggtggtgggcgagctggg 203
>dbj|AK059283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D06, full
insert sequence
Length = 1253
Score = 573 bits (289), Expect = e-161
Identities = 532/613 (86%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaat 676
|||||||||||| ||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 911 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttctatcccttctcgaat 852
Query: 677 ggataaattaggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatag 736
||| ||||| || ||||| ||||||||||| | |||| || ||||||||||| |||||
Sbjct: 851 ggacaaattcggccttataatctcctcagacctaaccaagaagatgtcaccgatatatag 792
Query: 737 atgatttgttggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggac 796
|||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 791 atgattggttggcacatatacactgcacagttcttcatcacctttgtcagtctgaaggat 732
Query: 797 cacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgc 856
|| || |||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct: 731 catcgtcgatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgc 672
Query: 857 aacttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttga 916
||||||||| || || || ||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 671 aacttctttaaatgccgttgtattttgatctggtgaaacagcagtgctaacttgcttcga 612
Query: 917 tgctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaa 976
||| |||||||| || |||||||| ||||||||||| |||||||| || || | ||| ||
Sbjct: 611 tgcagaatatatgtgccttacaaaaggcattttcttaataaaccattctccaatccaaaa 552
Query: 977 gatggttgaaccaacccatgaagaaacaaatattccaaccagaaatatgaataccagaga 1036
|| |||||||| |||||||||||||||||||||||||| || |||||||||| || ||
Sbjct: 551 gacagttgaacccacccatgaagaaacaaatattccaactaggaatatgaatagcaagga 492
Query: 1037 agtcaaaaaaccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaa 1096
||||||||| ||||| |||||||| || | ||||| |||||||| || |||||||||||
Sbjct: 491 agtcaaaaacccaaggccaaatatatcaaatccaagctttgcatacagtggactgaaaaa 432
Query: 1097 accatcaacaaattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaag 1156
||||||||||| | || ||||||||| ||||||||||| || || |||||||| |||||
Sbjct: 431 tccatcaacaaacttaacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaag 372
Query: 1157 gactacacatccagtcataaactttcttgagacccaactttgaagaacagcacagcatgc 1216
||||| ||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||
Sbjct: 371 aactacgcatcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgc 312
Query: 1217 cttgcgtgtggag 1229
|||||| ||||||
Sbjct: 311 cttgcgggtggag 299
>dbj|AK121867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103I02, full
insert sequence
Length = 1424
Score = 573 bits (289), Expect = e-161
Identities = 532/613 (86%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaat 676
|||||||||||| ||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 1091 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttctatcccttctcgaat 1032
Query: 677 ggataaattaggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatag 736
||| ||||| || ||||| ||||||||||| | |||| || ||||||||||| |||||
Sbjct: 1031 ggacaaattcggccttataatctcctcagacctaaccaagaagatgtcaccgatatatag 972
Query: 737 atgatttgttggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggac 796
|||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 971 atgattggttggcacatatacactgcacagttcttcatcacctttgtcagtctgaaggat 912
Query: 797 cacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgc 856
|| || |||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct: 911 catcgtcgatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgc 852
Query: 857 aacttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttga 916
||||||||| || || || ||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 851 aacttctttaaatgccgttgtattttgatctggtgaaacagcagtgctaacttgcttcga 792
Query: 917 tgctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaa 976
||| |||||||| || |||||||| ||||||||||| |||||||| || || | ||| ||
Sbjct: 791 tgcagaatatatgtgccttacaaaaggcattttcttaataaaccattctccaatccaaaa 732
Query: 977 gatggttgaaccaacccatgaagaaacaaatattccaaccagaaatatgaataccagaga 1036
|| |||||||| |||||||||||||||||||||||||| || |||||||||| || ||
Sbjct: 731 gacagttgaacccacccatgaagaaacaaatattccaactaggaatatgaatagcaagga 672
Query: 1037 agtcaaaaaaccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaa 1096
||||||||| ||||| |||||||| || | ||||| |||||||| || |||||||||||
Sbjct: 671 agtcaaaaacccaaggccaaatatatcaaatccaagctttgcatacagtggactgaaaaa 612
Query: 1097 accatcaacaaattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaag 1156
||||||||||| | || ||||||||| ||||||||||| || || |||||||| |||||
Sbjct: 611 tccatcaacaaacttaacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaag 552
Query: 1157 gactacacatccagtcataaactttcttgagacccaactttgaagaacagcacagcatgc 1216
||||| ||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||
Sbjct: 551 aactacgcatcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgc 492
Query: 1217 cttgcgtgtggag 1229
|||||| ||||||
Sbjct: 491 cttgcgggtggag 479
>ref|XM_475304.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 573 bits (289), Expect = e-161
Identities = 532/613 (86%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaat 676
|||||||||||| ||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 720 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttctatcccttctcgaat 661
Query: 677 ggataaattaggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatag 736
||| ||||| || ||||| ||||||||||| | |||| || ||||||||||| |||||
Sbjct: 660 ggacaaattcggccttataatctcctcagacctaaccaagaagatgtcaccgatatatag 601
Query: 737 atgatttgttggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggac 796
|||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 600 atgattggttggcacatatacactgcacagttcttcatcacctttgtcagtctgaaggat 541
Query: 797 cacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgc 856
|| || |||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct: 540 catcgtcgatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgc 481
Query: 857 aacttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttga 916
||||||||| || || || ||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 480 aacttctttaaatgccgttgtattttgatctggtgaaacagcagtgctaacttgcttcga 421
Query: 917 tgctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaa 976
||| |||||||| || |||||||| ||||||||||| |||||||| || || | ||| ||
Sbjct: 420 tgcagaatatatgtgccttacaaaaggcattttcttaataaaccattctccaatccaaaa 361
Query: 977 gatggttgaaccaacccatgaagaaacaaatattccaaccagaaatatgaataccagaga 1036
|| |||||||| |||||||||||||||||||||||||| || |||||||||| || ||
Sbjct: 360 gacagttgaacccacccatgaagaaacaaatattccaactaggaatatgaatagcaagga 301
Query: 1037 agtcaaaaaaccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaa 1096
||||||||| ||||| |||||||| || | ||||| |||||||| || |||||||||||
Sbjct: 300 agtcaaaaacccaaggccaaatatatcaaatccaagctttgcatacagtggactgaaaaa 241
Query: 1097 accatcaacaaattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaag 1156
||||||||||| | || ||||||||| ||||||||||| || || |||||||| |||||
Sbjct: 240 tccatcaacaaacttaacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaag 181
Query: 1157 gactacacatccagtcataaactttcttgagacccaactttgaagaacagcacagcatgc 1216
||||| ||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||
Sbjct: 180 aactacgcatcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgc 121
Query: 1217 cttgcgtgtggag 1229
|||||| ||||||
Sbjct: 120 cttgcgggtggag 108
>gb|CF323560.1|CF323560 HDN--04-C19.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-C19, mRNA sequence
Length = 512
Score = 456 bits (230), Expect = e-125
Identities = 423/486 (87%), Gaps = 1/486 (0%)
Strand = Plus / Minus
Query: 720 atgtcaccgatgtatagatgatttgttg-gcacatacacactacacagttcttcatcgcc 778
||||||||||| ||||||||||| |||| ||||||| ||||| |||||||||||||| ||
Sbjct: 494 atgtcaccgatatatagatgattggttgngcacatatacactgcacagttcttcatcacc 435
Query: 779 tttgtcagtctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcg 838
||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct: 434 tttgtcagtctgaaggatcatcgtcgatgttatgaatccaaatgcatattcaccaatacg 375
Query: 839 tggatgacgaattattgcaacttctttgaaagcagtcgtattttgatctggtgaaattgc 898
||||||| |||||||||||||||||| || || || ||||||||||||||||||| ||
Sbjct: 374 gggatgactaattattgcaacttctttaaatgccgttgtattttgatctggtgaaacagc 315
Query: 899 agtgctgacttgctttgatgctgaatatatatgtcttacaaatggcattttctttataaa 958
|||||| |||||||| ||||| |||||||| || |||||||| ||||||||||| |||||
Sbjct: 314 agtgctaacttgcttcgatgcagaatatatgtgccttacaaaaggcattttcttaataaa 255
Query: 959 ccactcgcccacccagaagatggttgaaccaacccatgaagaaacaaatattccaaccag 1018
||| || || | ||| |||| |||||||| |||||||||||||||||||||||||| ||
Sbjct: 254 ccattctccaatccaaaagacagttgaacccacccatgaagaaacaaatattccaactag 195
Query: 1019 aaatatgaataccagagaagtcaaaaaaccaagaccaaatatgtcgattccaatttttgc 1078
|||||||||| || ||||||||||| ||||| |||||||| || | ||||| |||||
Sbjct: 194 gaatatgaatagcaaggaagtcaaaaacccaaggccaaatatatcaaatccaagctttgc 135
Query: 1079 atataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgt 1138
||| || ||||||||||| ||||||||||| | || ||||||||| ||||||||||| ||
Sbjct: 134 atacagtggactgaaaaatccatcaacaaacttaacaaaccaccaggtgatgaagaatgt 75
Query: 1139 gactgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttg 1198
|| |||||||| ||||| ||||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 74 aacagcaacagggaaaagaactacgcatcctgtcataaattttcttgacacccagctttg 15
Query: 1199 aagaac 1204
||||||
Sbjct: 14 aagaac 9
>gb|CB653924.1|CB653924 OSJNEc05G06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05G06 3', mRNA sequence
Length = 788
Score = 448 bits (226), Expect = e-123
Identities = 415/478 (86%)
Strand = Plus / Plus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaat 676
|||||||||||| ||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 311 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttctatcccttctcgaat 370
Query: 677 ggataaattaggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatag 736
||| ||||| || ||||| ||||||||||| | |||| || ||||||||||| |||||
Sbjct: 371 ggacaaattcggccttataatctcctcagacctaaccaagaagatgtcaccgatatatag 430
Query: 737 atgatttgttggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggac 796
|||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 431 atgattggttggcacatatacactgcacagttcttcatcacctttgtcagtctgaaggat 490
Query: 797 cacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgc 856
|| || |||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct: 491 catcgtcgatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgc 550
Query: 857 aacttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttga 916
||||||||| || || || ||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 551 aacttctttaaatgccgttgtattttgatctggtgaaacagcagtgctaacttgcttcga 610
Query: 917 tgctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaa 976
||| |||||||| || |||||||| ||||||||||| |||||||| || || | ||| ||
Sbjct: 611 tgcagaatatatgtgccttacaaaaggcattttcttaataaaccattctccaatccaaaa 670
Query: 977 gatggttgaaccaacccatgaagaaacaaatattccaaccagaaatatgaataccagaga 1036
|| |||||||| |||||||||||||||||||||||||| || |||||||||| || ||
Sbjct: 671 gacagttgaacccacccatgaagaaacaaatattccaactaggaatatgaatagcaagga 730
Query: 1037 agtcaaaaaaccaagaccaaatatgtcgattccaatttttgcatataggggactgaaa 1094
||||||||| ||||| |||||||| || | ||||| |||||||| || |||||||||
Sbjct: 731 agtcaaaaacccaaggccaaatatatcaaatccaagctttgcatacagtggactgaaa 788
>gb|CA999153.1|CA999153 S234N_C11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 676
Score = 428 bits (216), Expect = e-117
Identities = 387/444 (87%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaat 676
||||||||| || ||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 458 tgcaatcacatgcggcatggtcattcctccagaaacaatgatttctatcccttctcgaat 399
Query: 677 ggataaattaggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatag 736
||| ||||| || ||||| ||||||||||| | |||| || ||||||||||| |||||
Sbjct: 398 ggacaaattcggccttataatctcctcagacctaaccaagaagatgtcaccgatatatag 339
Query: 737 atgatttgttggcacatacacactacacagttcttcatcgcctttgtcagtctgaaggac 796
|||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 338 atgattggttggcacatatacactgcacagttcttcatcacctttgtcagtctgaaggat 279
Query: 797 cacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgc 856
|| || |||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct: 278 catcgtcgatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgc 219
Query: 857 aacttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttga 916
||||||||| || || || ||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 218 aacttctttaaatgccgttgtattttgatctggtgaaacagcagtgctaacttgcttcga 159
Query: 917 tgctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaa 976
||| |||||||| || |||||||| ||||||||||| |||||||| || || | ||| ||
Sbjct: 158 tgcagaatatatgtgccttacaaaaggcattttcttaataaaccattctccaatccaaaa 99
Query: 977 gatggttgaaccaacccatgaagaaacaaatattccaaccagaaatatgaataccagaga 1036
|| |||||||| |||||||||||||||||||||||||| || |||||||||| || ||
Sbjct: 98 gacagttgaacccacccatgaagaaacaaatattccaactaggaatatgaatagcaagga 39
Query: 1037 agtcaaaaaaccaagaccaaatat 1060
||||||||| ||||| ||||||||
Sbjct: 38 agtcaaaaacccaaggccaaatat 15
>gb|CB653923.1|CB653923 OSJNEc05G06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05G06 5', mRNA sequence
Length = 646
Score = 379 bits (191), Expect = e-102
Identities = 359/415 (86%)
Strand = Plus / Minus
Query: 815 tccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttgaaagcagt 874
||||||||||||||||||||| || ||||||| |||||||||||||||||| || || ||
Sbjct: 646 tccaaatgcatattcaccaatacggggatgactaattattgcaacttctttaaatgccgt 587
Query: 875 cgtattttgatctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtct 934
||||||||||||||||||| |||||||| |||||||| ||||| |||||||| || ||
Sbjct: 586 tgtattttgatctggtgaaacagcagtgctaacttgcttcgatgcagaatatatgtgcct 527
Query: 935 tacaaatggcattttctttataaaccactcgcccacccagaagatggttgaaccaaccca 994
|||||| ||||||||||| |||||||| || || | ||| |||| |||||||| |||||
Sbjct: 526 tacaaaaggcattttcttaataaaccattctccaatccaaaagacagttgaacccaccca 467
Query: 995 tgaagaaacaaatattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
||||||||||||||||||||| || |||||||||| || ||||||||||| ||||| ||
Sbjct: 466 tgaagaaacaaatattccaactaggaatatgaatagcaaggaagtcaaaaacccaaggcc 407
Query: 1055 aaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattgaat 1114
|||||| || | ||||| |||||||| || ||||||||||| ||||||||||| | ||
Sbjct: 406 aaatatatcaaatccaagctttgcatacagtggactgaaaaatccatcaacaaacttaac 347
Query: 1115 aaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacatccagtcat 1174
||||||||| ||||||||||| || || |||||||| ||||| ||||| ||||| |||||
Sbjct: 346 aaaccaccaggtgatgaagaatgtaacagcaacagggaaaagaactacgcatcctgtcat 287
Query: 1175 aaactttcttgagacccaactttgaagaacagcacagcatgccttgcgtgtggag 1229
||| |||||||| ||||| ||||||||||||||| | ||||||||||| ||||||
Sbjct: 286 aaattttcttgacacccagctttgaagaacagcaaaacatgccttgcgggtggag 232
>gb|CF324134.1|CF324134 HDN--05-L13.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-L13, mRNA sequence
Length = 465
Score = 367 bits (185), Expect = 1e-098
Identities = 236/253 (93%)
Strand = Plus / Minus
Query: 994 atgaagaaacaaatattccaaccagaaatatgaataccagagaagtcaaaaaaccaagac 1053
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 465 atgaggaaacaaatattccaaccagaaaaatgaataccagagaagtcagaaaaccaagac 406
Query: 1054 caaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattgaa 1113
||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||||
Sbjct: 405 caaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattgaa 346
Query: 1114 taaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacatccagtca 1173
|||||||||||||||||||||||||||| ||||||||||| || || || ||||||||||
Sbjct: 345 taaaccaccatgtgatgaagaacgtgacagcaacaggaaacagaacgacgcatccagtca 286
Query: 1174 taaactttcttgagacccaactttgaagaacagcacagcatgccttgcgtgtggaggtgg 1233
|||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 285 taaattttcttgacacccaactttgaagaacagcgcagcatgccttgcgggtggaggtgg 226
Query: 1234 tgggcgagctggg 1246
|||||||||||||
Sbjct: 225 tgggcgagctggg 213
>gb|CF309704.1|CF309704 ABF--03-P22.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group) cDNA
clone ABF--03-P22, mRNA sequence
Length = 647
Score = 339 bits (171), Expect = 2e-090
Identities = 231/251 (92%)
Strand = Plus / Minus
Query: 903 ctgacttgctttgatgctgaatatatatgtcttacaaatggcattttctttataaaccac 962
||||||||||||||||| || ||||| || | ||||||||||||||||||||||||||
Sbjct: 647 ctgacttgctttgatgcagagtatatgtgccgaacaaatggcattttctttataaaccat 588
Query: 963 tcgcccacccagaagatggttgaaccaacccatgaagaaacaaatattccaaccagaaat 1022
|| || ||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 587 tctccaacccaaaagatggttgaacccacccatgaggaaacaaatattccaaccagaaaa 528
Query: 1023 atgaataccagagaagtcaaaaaaccaagaccaaatatgtcgattccaatttttgcatat 1082
||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||
Sbjct: 527 atgaataccagagaagtcagaaaaccaagaccaaatatgtcgatcccaagttttgcatat 468
Query: 1083 aggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtgact 1142
|| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agtgggctgaaaaagccatcaacaaattgaataaaccaccatgtgatgaagaacgtgaca 408
Query: 1143 gcaacaggaaa 1153
|||||||||||
Sbjct: 407 gcaacaggaaa 397
Score = 133 bits (67), Expect = 3e-028
Identities = 79/83 (95%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgccttgcgt 1223
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 295 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgccttgcgg 236
Query: 1224 gtggaggtggtgggcgagctggg 1246
|||||||||||||||||||||||
Sbjct: 235 gtggaggtggtgggcgagctggg 213
>gb|C97538.1|C97538 C97538 Rice callus Oryza sativa (japonica cultivar-group) cDNA clone
C60342_7A, mRNA sequence
Length = 709
Score = 327 bits (165), Expect = 8e-087
Identities = 397/471 (84%), Gaps = 4/471 (0%)
Strand = Plus / Minus
Query: 762 cacagttcttcatcgcctttgtcagtctgaaggaccacagttgatgttatgaatccaaat 821
||||||||| ||| ||||||||||||| ||||| || | |||||| |||||||||||
Sbjct: 709 cacagttctnaatcacctttgtcagtctnaaggatcatcatcgatgttntgaatccaaat 650
Query: 822 gcatattcaccaattcgtggatgacgaattattgcaacttctttgaaagcagtcgtattt 881
|||||||||| ||| || ||||||| |||||||||||||||||| || | || ||||||
Sbjct: 649 gcatattcac-aatacggggatgactaattattgcaacttctttaaatnccgttgtattt 591
Query: 882 tgatctggtgaaatt-gcagtgctgacttgctttgatgctgaatatatatgtcttacaaa 940
||||||||||||| |||||||| |||||||| ||||| |||||||| || ||||||||
Sbjct: 590 tgatctggtgaaaacagcagtgctaacttgcttcgatgcagaatatatgtgccttacaaa 531
Query: 941 tggcattttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaaga 1000
||||||||||| |||||||| || || | || |||| ||||| || |||||||||||
Sbjct: 530 aggcattttcttaataaaccattctccaatcccaaagacagttgancccacccatgaaga 471
Query: 1001 aa-caaatattccaacc-agaaatatgaataccagagaagtcaaaaaaccaagaccaaat 1058
|| |||||||||||| | || |||||||||| || ||||||||||| ||||| ||||||
Sbjct: 470 aaacaaatattccaaactaggaatatgaatagcaaggaagtcaaaaacccaaggccaaat 411
Query: 1059 atgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattgaataaac 1118
|| || | || || |||||||| || ||||||||||| ||||||||||| | || ||||
Sbjct: 410 atatcaaatcnaagctttgcatacagtggactgaaaaatccatcaacaaacttaacaaac 351
Query: 1119 caccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacatccagtcataaac 1178
||||| ||||||||||| || || |||||||| ||||| ||||| ||||| ||||||||
Sbjct: 350 caccaggtgatgaagaatgtaacagcaacagggaaaagaactacgcatcctgtcataaat 291
Query: 1179 tttcttgagacccaactttgaagaacagcacagcatgccttgcgtgtggag 1229
|||||||| ||||| ||||||||||||||| | ||||||||||| ||||||
Sbjct: 290 tttcttgacacccagctttgaagaacagcaaaacatgccttgcgggtggag 240
>gb|CF312469.1|CF312469 ABF--08-D23.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group) cDNA
clone ABF--08-D23, mRNA sequence
Length = 356
Score = 313 bits (158), Expect = 1e-082
Identities = 227/250 (90%)
Strand = Plus / Minus
Query: 904 tgacttgctttgatgctgaatatatatgtcttacaaatggcattttctttataaaccact 963
|||||||||||||||| || ||||| || | |||||||||||||||||||||||||| |
Sbjct: 356 tgacttgctttgatgcagagtatatgtgccgaacaaatggcattttctttataaaccatt 297
Query: 964 cgcccacccagaagatggttgaaccaacccatgaagaaacaaatattccaaccagaaata 1023
| || ||||| ||||||||| |||| |||||||| ||| ||||||||||||||||||| |
Sbjct: 296 ctccaacccaaaagatggttaaacccacccatgaggaaccaaatattccaaccagaaaaa 237
Query: 1024 tgaataccagagaagtcaaaaaaccaagaccaaatatgtcgattccaatttttgcatata 1083
|||||||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||
Sbjct: 236 tgaataccagagaagtcagaaaaccaagaccgaatatgtcgatcccaagttttgcatata 177
Query: 1084 ggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtgactg 1143
| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 176 gtgggctgaaaaagccatcaacaaattgaataaaccaccatgtgatgaagaacgtgacag 117
Query: 1144 caacaggaaa 1153
||||||||||
Sbjct: 116 caacaggaaa 107
>gb|C72626.1|C72626 C72626 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1952_1A, mRNA sequence
Length = 428
Score = 293 bits (148), Expect = 1e-076
Identities = 217/239 (90%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 1009 ttccaaccagaaatatgaataccagagaagtcaaaaaacc-aagaccaaatatgtcgatt 1067
|||||||||| || || || |||||||||||| ||||| ||||||||||||||||||
Sbjct: 428 ttccaaccaggaaaattgatnccagagaagtcaggaaacccaagaccaaatatgtcgatc 369
Query: 1068 ccaatttttgcatataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtg 1127
|||| |||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 368 ccaagttttgcatatagtgggctgaaaaagccatcaacaaattgaataaaccaccatgtg 309
Query: 1128 atgaagaacgtgactgcaacaggaaaaaggactacacatccagtcataaactttcttgag 1187
|||||||||||||| ||||||||||| || || || |||||||||||||| ||||||||
Sbjct: 308 atgaagaacgtgacagcaacaggaaacagaacgacgcatccagtcataaattttcttgac 249
Query: 1188 acccaactttgaagaacagcacagcatgccttgcgtgtggaggtggtgggcgagctggg 1246
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 248 acccaactttgaagaacagcgcagcatgccttgcgggtggaggtggtgggcgagctggg 190
>gb|C99208.1|C99208 C99208 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10436_8Z, mRNA sequence
Length = 645
Score = 248 bits (125), Expect = 6e-063
Identities = 260/300 (86%), Gaps = 4/300 (1%)
Strand = Plus / Minus
Query: 618 gcaatcacctgaggcatggtcattcctcctgacacaatt-atttcaattccttctcgaat 676
||||||||||| ||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 332 gcaatcacctgcggcatggtcattcctccagaaacaatggatttctatcccttctcgaat 273
Query: 677 ggataaattaggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatag 736
||| ||||| || ||||| ||||||||||| | |||| || ||||||||||| |||||
Sbjct: 272 ggacaaattcggccttataatctcctcagacctaaccaagaagatgtcaccgatatatag 213
Query: 737 atgatttgttggcacatacacacta-cacagttcttcatcgcctttgtcagtctgaagga 795
|||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 212 atgattggttggcacatatacactggcacagttcttcatcacctttgtcagtctgaagga 153
Query: 796 ccacagttgatgttatgaatccaaatgcatattcaccaattcgtggat-gacgaattatt 854
|| || |||||||||||||||||||||||||||||||| || |||| ||| |||||||
Sbjct: 152 tcatcgtcgatgttatgaatccaaatgcatattcaccaatacggggatggactaattatt 93
Query: 855 gcaacttctttgaaagcagtcgtatttt-gatctggtgaaattgcagtgctgacttgctt 913
||||||||||| || || || ||||||| |||||||||||| |||||||| || |||||
Sbjct: 92 gcaacttctttaaatgccgttgtattttggatctggtgaaacagcagtgctaacntgctt 33
>gb|AACV01002753.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002753, whole
genome shotgun sequence
Length = 18525
Score = 216 bits (109), Expect = 2e-053
Identities = 154/169 (91%)
Strand = Plus / Plus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
|||||||||| ||||||||||||||||||||||| || ||||| || | ||||||||||
Sbjct: 14129 ctggtgaaatggcagtgctgacttgctttgatgcagagtatatgtgccgaacaaatggca 14188
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
|||||||||||||||| || || ||||| |||||||||||||| |||||||| |||||||
Sbjct: 14189 ttttctttataaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaa 14248
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 14249 atattccaaccagaaaaatgaataccagagaagtcagaaaaccaagacc 14297
Score = 190 bits (96), Expect = 1e-045
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatg 722
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 13651 attccttctcgaatggataaatttggtcttattatctcctcagagttcaccagaaatatg 13710
Query: 723 tcaccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttg 782
||||| ||||| |||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 13711 tcaccaatgtaaagatgatttgttggcacataaacgctgcacagttcttcgtcgcctttg 13770
Query: 783 tcagtctg 790
||||||||
Sbjct: 13771 tcagtctg 13778
Score = 155 bits (78), Expect = 7e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 14626 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 14685
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 14686 aataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 14727
Score = 129 bits (65), Expect = 4e-027
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
|||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 13933 ctgaagaacaacagttgatgttataaatccaaatgcatattcaccaatacgtggatgacg 13992
Query: 848 aattattgcaacttctttgaaagcagtcgtattttgatctg 888
|||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 13993 aattatcgcaacttctttaaaagctgttgtgttttgatctg 14033
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 14828 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 14882
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 13363 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 13422
Query: 627 tgaggcatggtcattcctcctgacacaattatttc 661
|| ||||| ||||||||||| || |||||||||||
Sbjct: 13423 tgtggcatagtcattcctccagaaacaattatttc 13457
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 15885 ccttgcgggtggaggtggtgggcgagctggg 15915
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 216 bits (109), Expect = 2e-053
Identities = 154/169 (91%)
Strand = Plus / Plus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
|||||||||| ||||||||||||||||||||||| || ||||| || | ||||||||||
Sbjct: 37660043 ctggtgaaatggcagtgctgacttgctttgatgcagagtatatgtgccgaacaaatggca 37660102
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
|||||||||||||||| || || ||||| |||||||||||||| |||||||| |||||||
Sbjct: 37660103 ttttctttataaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaa 37660162
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 37660163 atattccaaccagaaaaatgaataccagagaagtcagaaaaccaagacc 37660211
Score = 190 bits (96), Expect = 1e-045
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatg 722
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 37659565 attccttctcgaatggataaatttggtcttattatctcctcagagttcaccagaaatatg 37659624
Query: 723 tcaccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttg 782
||||| ||||| |||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 37659625 tcaccaatgtaaagatgatttgttggcacataaacgctgcacagttcttcgtcgcctttg 37659684
Query: 783 tcagtctg 790
||||||||
Sbjct: 37659685 tcagtctg 37659692
Score = 155 bits (78), Expect = 7e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 37660540 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 37660599
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 37660600 aataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 37660641
Score = 129 bits (65), Expect = 4e-027
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
|||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 37659847 ctgaagaacaacagttgatgttataaatccaaatgcatattcaccaatacgtggatgacg 37659906
Query: 848 aattattgcaacttctttgaaagcagtcgtattttgatctg 888
|||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 37659907 aattatcgcaacttctttaaaagctgttgtgttttgatctg 37659947
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 37660742 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 37660796
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 37659277 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 37659336
Query: 627 tgaggcatggtcattcctcctgacacaattatttc 661
|| ||||| ||||||||||| || |||||||||||
Sbjct: 37659337 tgtggcatagtcattcctccagaaacaattatttc 37659371
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 37661800 ccttgcgggtggaggtggtgggcgagctggg 37661830
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 216 bits (109), Expect = 2e-053
Identities = 154/169 (91%)
Strand = Plus / Plus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
|||||||||| ||||||||||||||||||||||| || ||||| || | ||||||||||
Sbjct: 12107426 ctggtgaaatggcagtgctgacttgctttgatgcagagtatatgtgccgaacaaatggca 12107485
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
|||||||||||||||| || || ||||| |||||||||||||| |||||||| |||||||
Sbjct: 12107486 ttttctttataaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaa 12107545
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 12107546 atattccaaccagaaaaatgaataccagagaagtcagaaaaccaagacc 12107594
Score = 190 bits (96), Expect = 1e-045
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatg 722
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 12106948 attccttctcgaatggataaatttggtcttattatctcctcagagttcaccagaaatatg 12107007
Query: 723 tcaccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttg 782
||||| ||||| |||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 12107008 tcaccaatgtaaagatgatttgttggcacataaacgctgcacagttcttcgtcgcctttg 12107067
Query: 783 tcagtctg 790
||||||||
Sbjct: 12107068 tcagtctg 12107075
Score = 155 bits (78), Expect = 7e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 12107923 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 12107982
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12107983 aataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 12108024
Score = 129 bits (65), Expect = 4e-027
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
|||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 12107230 ctgaagaacaacagttgatgttataaatccaaatgcatattcaccaatacgtggatgacg 12107289
Query: 848 aattattgcaacttctttgaaagcagtcgtattttgatctg 888
|||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 12107290 aattatcgcaacttctttaaaagctgttgtgttttgatctg 12107330
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 12108125 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 12108179
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 12106660 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 12106719
Query: 627 tgaggcatggtcattcctcctgacacaattatttc 661
|| ||||| ||||||||||| || |||||||||||
Sbjct: 12106720 tgtggcatagtcattcctccagaaacaattatttc 12106754
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 12109183 ccttgcgggtggaggtggtgggcgagctggg 12109213
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0677H08
Length = 178830
Score = 216 bits (109), Expect = 2e-053
Identities = 154/169 (91%)
Strand = Plus / Plus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
|||||||||| ||||||||||||||||||||||| || ||||| || | ||||||||||
Sbjct: 39847 ctggtgaaatggcagtgctgacttgctttgatgcagagtatatgtgccgaacaaatggca 39906
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
|||||||||||||||| || || ||||| |||||||||||||| |||||||| |||||||
Sbjct: 39907 ttttctttataaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaa 39966
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 39967 atattccaaccagaaaaatgaataccagagaagtcagaaaaccaagacc 40015
Score = 190 bits (96), Expect = 1e-045
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatg 722
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 39369 attccttctcgaatggataaatttggtcttattatctcctcagagttcaccagaaatatg 39428
Query: 723 tcaccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttg 782
||||| ||||| |||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 39429 tcaccaatgtaaagatgatttgttggcacataaacgctgcacagttcttcgtcgcctttg 39488
Query: 783 tcagtctg 790
||||||||
Sbjct: 39489 tcagtctg 39496
Score = 155 bits (78), Expect = 7e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 40344 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 40403
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 40404 aataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 40445
Score = 129 bits (65), Expect = 4e-027
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
|||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 39651 ctgaagaacaacagttgatgttataaatccaaatgcatattcaccaatacgtggatgacg 39710
Query: 848 aattattgcaacttctttgaaagcagtcgtattttgatctg 888
|||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 39711 aattatcgcaacttctttaaaagctgttgtgttttgatctg 39751
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 40546 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 40600
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 39081 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 39140
Query: 627 tgaggcatggtcattcctcctgacacaattatttc 661
|| ||||| ||||||||||| || |||||||||||
Sbjct: 39141 tgtggcatagtcattcctccagaaacaattatttc 39175
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 41604 ccttgcgggtggaggtggtgggcgagctggg 41634
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 216 bits (109), Expect = 2e-053
Identities = 154/169 (91%)
Strand = Plus / Plus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
|||||||||| ||||||||||||||||||||||| || ||||| || | ||||||||||
Sbjct: 11834876 ctggtgaaatggcagtgctgacttgctttgatgcagagtatatgtgccgaacaaatggca 11834935
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
|||||||||||||||| || || ||||| |||||||||||||| |||||||| |||||||
Sbjct: 11834936 ttttctttataaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaa 11834995
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 11834996 atattccaaccagaaaaatgaataccagagaagtcagaaaaccaagacc 11835044
Score = 190 bits (96), Expect = 1e-045
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatg 722
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 11834398 attccttctcgaatggataaatttggtcttattatctcctcagagttcaccagaaatatg 11834457
Query: 723 tcaccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttg 782
||||| ||||| |||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 11834458 tcaccaatgtaaagatgatttgttggcacataaacgctgcacagttcttcgtcgcctttg 11834517
Query: 783 tcagtctg 790
||||||||
Sbjct: 11834518 tcagtctg 11834525
Score = 155 bits (78), Expect = 7e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 11835373 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 11835432
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 11835433 aataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 11835474
Score = 129 bits (65), Expect = 4e-027
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
|||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 11834680 ctgaagaacaacagttgatgttataaatccaaatgcatattcaccaatacgtggatgacg 11834739
Query: 848 aattattgcaacttctttgaaagcagtcgtattttgatctg 888
|||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 11834740 aattatcgcaacttctttaaaagctgttgtgttttgatctg 11834780
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 11835575 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 11835629
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 11834110 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 11834169
Query: 627 tgaggcatggtcattcctcctgacacaattatttc 661
|| ||||| ||||||||||| || |||||||||||
Sbjct: 11834170 tgtggcatagtcattcctccagaaacaattatttc 11834204
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 11836632 ccttgcgggtggaggtggtgggcgagctggg 11836662
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 216 bits (109), Expect = 2e-053
Identities = 154/169 (91%)
Strand = Plus / Plus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
|||||||||| ||||||||||||||||||||||| || ||||| || | ||||||||||
Sbjct: 37036597 ctggtgaaatggcagtgctgacttgctttgatgcagagtatatgtgccgaacaaatggca 37036656
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
|||||||||||||||| || || ||||| |||||||||||||| |||||||| |||||||
Sbjct: 37036657 ttttctttataaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaa 37036716
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 37036717 atattccaaccagaaaaatgaataccagagaagtcagaaaaccaagacc 37036765
Score = 190 bits (96), Expect = 1e-045
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatg 722
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 37036119 attccttctcgaatggataaatttggtcttattatctcctcagagttcaccagaaatatg 37036178
Query: 723 tcaccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttg 782
||||| ||||| |||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 37036179 tcaccaatgtaaagatgatttgttggcacataaacgctgcacagttcttcgtcgcctttg 37036238
Query: 783 tcagtctg 790
||||||||
Sbjct: 37036239 tcagtctg 37036246
Score = 155 bits (78), Expect = 7e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 37037094 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 37037153
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 37037154 aataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 37037195
Score = 129 bits (65), Expect = 4e-027
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
|||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 37036401 ctgaagaacaacagttgatgttataaatccaaatgcatattcaccaatacgtggatgacg 37036460
Query: 848 aattattgcaacttctttgaaagcagtcgtattttgatctg 888
|||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 37036461 aattatcgcaacttctttaaaagctgttgtgttttgatctg 37036501
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 37037296 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 37037350
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 37035831 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 37035890
Query: 627 tgaggcatggtcattcctcctgacacaattatttc 661
|| ||||| ||||||||||| || |||||||||||
Sbjct: 37035891 tgtggcatagtcattcctccagaaacaattatttc 37035925
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 37038353 ccttgcgggtggaggtggtgggcgagctggg 37038383
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 216 bits (109), Expect = 2e-053
Identities = 154/169 (91%)
Strand = Plus / Plus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
|||||||||| ||||||||||||||||||||||| || ||||| || | ||||||||||
Sbjct: 37579373 ctggtgaaatggcagtgctgacttgctttgatgcagagtatatgtgccgaacaaatggca 37579432
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
|||||||||||||||| || || ||||| |||||||||||||| |||||||| |||||||
Sbjct: 37579433 ttttctttataaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaa 37579492
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 37579493 atattccaaccagaaaaatgaataccagagaagtcagaaaaccaagacc 37579541
Score = 190 bits (96), Expect = 1e-045
Identities = 120/128 (93%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatg 722
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 37578895 attccttctcgaatggataaatttggtcttattatctcctcagagttcaccagaaatatg 37578954
Query: 723 tcaccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttg 782
||||| ||||| |||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 37578955 tcaccaatgtaaagatgatttgttggcacataaacgctgcacagttcttcgtcgcctttg 37579014
Query: 783 tcagtctg 790
||||||||
Sbjct: 37579015 tcagtctg 37579022
Score = 155 bits (78), Expect = 7e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 37579870 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 37579929
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaa 1153
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 37579930 aataaaccaccatgtgatgaagaacgtgacagcaacaggaaa 37579971
Score = 129 bits (65), Expect = 4e-027
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
|||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 37579177 ctgaagaacaacagttgatgttataaatccaaatgcatattcaccaatacgtggatgacg 37579236
Query: 848 aattattgcaacttctttgaaagcagtcgtattttgatctg 888
|||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 37579237 aattatcgcaacttctttaaaagctgttgtgttttgatctg 37579277
Score = 85.7 bits (43), Expect = 5e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 37580072 catccagtcataaattttcttgacacccaactttgaagaacagcgcagcatgcct 37580126
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 37578607 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 37578666
Query: 627 tgaggcatggtcattcctcctgacacaattatttc 661
|| ||||| ||||||||||| || |||||||||||
Sbjct: 37578667 tgtggcatagtcattcctccagaaacaattatttc 37578701
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1216 ccttgcgtgtggaggtggtgggcgagctggg 1246
||||||| |||||||||||||||||||||||
Sbjct: 37581130 ccttgcgggtggaggtggtgggcgagctggg 37581160
>gb|AU077950.1|AU077950 AU077950 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12951_8Z, mRNA sequence
Length = 718
Score = 206 bits (104), Expect = 2e-050
Identities = 164/184 (89%)
Strand = Plus / Minus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 279 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 220
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaatta 686
|| ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 219 tgtggcatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 160
Query: 687 ggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatagatgatttgtt 746
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 159 ggtcttattatctcctcagagttcaccagaaatatgtcaccaatgtaaagatgatttgtt 100
Query: 747 ggca 750
||||
Sbjct: 99 ggca 96
Score = 79.8 bits (40), Expect = 3e-012
Identities = 82/95 (86%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 947 tttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaaa 1006
||||||||||||||| || || ||||| ||||||| |||| | ||||||| | ||||||
Sbjct: 95 tttctttataaacca-tctccaacccaaaagatgggtgaanccacccatgggggaacaaa 37
Query: 1007 tattccaaccagaaatatgaataccagagaagtca 1041
||||||||||||||| ||| ||||||| |||||||
Sbjct: 36 tattccaaccagaaaaatggataccagggaagtca 2
>gb|CF306693.1|CF306693 HDA1--04-J13.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--04-J13, mRNA sequence
Length = 561
Score = 188 bits (95), Expect = 5e-045
Identities = 144/159 (90%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 897 gcagtgctgacttgctttgatgctgaatatatatgtcttacaaa-tggcattttctttat 955
||||||||||||||||||||||| || ||||| || | ||||| |||||||||||||||
Sbjct: 558 gcagtgctgacttgctttgatgcagagtatatgtgccgaacaaaatggcattttctttat 499
Query: 956 aaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaaatattccaac 1015
|||||| || || ||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct: 498 aaaccattctccaacccaaaagatggttgaacccacccatgaggaaacaaatattccaac 439
Query: 1016 cagaaatatgaataccagagaagtcaaaaaaccaagacc 1054
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 438 cagaaaaatgaataccagagaagtcagaaaaccaagacc 400
Score = 85.7 bits (43), Expect = 5e-014
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||
Sbjct: 71 accaaatatgtcgatcccaagttttgcatatagtgggctgaaaaagccatcaacaaattg 12
Query: 1112 aat 1114
|||
Sbjct: 11 aat 9
>gb|AU183277.1|AU183277 AU183277 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60874, mRNA sequence
Length = 454
Score = 178 bits (90), Expect = 5e-042
Identities = 180/210 (85%)
Strand = Plus / Minus
Query: 1020 aatatgaataccagagaagtcaaaaaaccaagaccaaatatgtcgattccaatttttgca 1079
|||||||||| || ||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 447 aatatgaatagcaaggaagtcaaaaacccaaggccaaatatatcaaatccaagctttgca 388
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
|| || ||||||||||| ||||||||||| | || ||||||||| ||||||||||| ||
Sbjct: 387 tacagtggactgaaaaatccatcaacaaacttaacaaaccaccaggtgatgaagaatgta 328
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
|| |||||||| ||||| ||||| ||||| |||||||| |||||||| ||||| ||||||
Sbjct: 327 acagcaacagggaaaagaactacgcatcctgtcataaattttcttgacacccagctttga 268
Query: 1200 agaacagcacagcatgccttgcgtgtggag 1229
||||||||| | ||||||||||| ||||||
Sbjct: 267 agaacagcaaaacatgccttgcgggtggag 238
>gb|C26744.1|C26744 C26744 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C12951_1A, mRNA sequence
Length = 391
Score = 155 bits (78), Expect = 7e-035
Identities = 136/152 (89%), Gaps = 3/152 (1%)
Strand = Plus / Minus
Query: 1098 ccatcaacaaattgaataaaccaccatgtgatgaa-gaacgtgactgcaacaggaaaaag 1156
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 340 ccatcaacaaattgaataaaccaccatgtgatgaaggaacgtgacagcaacaggaaacag 281
Query: 1157 gactacacatcc-agtcataaactttcttgagacccaactttgaagaacagcac-agcat 1214
|| || ||||| ||||||||| |||||||| |||||||||||||||||||| | |||||
Sbjct: 280 aacgacgcatccaagtcataaattttcttgacacccaactttgaagaacagcgcaagcat 221
Query: 1215 gccttgcgtgtggaggtggtgggcgagctggg 1246
|||||| |||||||| |||||||| |||||
Sbjct: 220 tgcttgcgggtggaggtngtgggcganctggg 189
>gb|AACV01012264.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012264, whole
genome shotgun sequence
Length = 25704
Score = 147 bits (74), Expect = 2e-032
Identities = 143/166 (86%)
Strand = Plus / Minus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
||||||||| |||||||| |||||||| ||||| |||||||| || |||||||| ||||
Sbjct: 5689 ctggtgaaacagcagtgctaacttgcttcgatgcagaatatatgtgccttacaaaaggca 5630
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
||||||| |||||||| || || | ||| |||| |||||||| ||||||||||||||||
Sbjct: 5629 ttttcttaataaaccattctccaatccaaaagacagttgaacccacccatgaagaaacaa 5570
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaag 1051
|||||||||| || |||||||||| || ||||||||||| |||||
Sbjct: 5569 atattccaactaggaatatgaatagcaaggaagtcaaaaacccaag 5524
Score = 129 bits (65), Expect = 4e-027
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 666 ccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatgtca 725
|||||||||||||| ||||| || ||||| ||||||||||| | |||| || ||||||
Sbjct: 6839 ccttctcgaatggacaaattcggccttataatctcctcagacctaaccaagaagatgtca 6780
Query: 726 ccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttgtca 785
||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 6779 ccgatatatagatgattggttggcacatatacactgcacagttcttcatcacctttgtca 6720
Query: 786 gtctg 790
|||||
Sbjct: 6719 gtctg 6715
Score = 113 bits (57), Expect = 2e-022
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 804 gatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttct 863
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 6062 gatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgcaacttct 6003
Query: 864 ttgaaagcagtcgtattttgatctg 888
|| || || || |||||||||||||
Sbjct: 6002 ttaaatgccgttgtattttgatctg 5978
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||| || | ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct: 5039 accaaatatatcaaatccaagctttgcatacagtggactgaaaaatccatcaacaaactt 4980
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactac 1162
|| ||||||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 4979 aacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaagaactac 4929
Score = 61.9 bits (31), Expect = 8e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||||
Sbjct: 4833 catcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgcct 4779
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttc 661
|||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 7016 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttc 6972
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 147 bits (74), Expect = 2e-032
Identities = 143/166 (86%)
Strand = Plus / Minus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
||||||||| |||||||| |||||||| ||||| |||||||| || |||||||| ||||
Sbjct: 2573668 ctggtgaaacagcagtgctaacttgcttcgatgcagaatatatgtgccttacaaaaggca 2573609
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
||||||| |||||||| || || | ||| |||| |||||||| ||||||||||||||||
Sbjct: 2573608 ttttcttaataaaccattctccaatccaaaagacagttgaacccacccatgaagaaacaa 2573549
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaag 1051
|||||||||| || |||||||||| || ||||||||||| |||||
Sbjct: 2573548 atattccaactaggaatatgaatagcaaggaagtcaaaaacccaag 2573503
Score = 129 bits (65), Expect = 4e-027
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 666 ccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatgtca 725
|||||||||||||| ||||| || ||||| ||||||||||| | |||| || ||||||
Sbjct: 2574818 ccttctcgaatggacaaattcggccttataatctcctcagacctaaccaagaagatgtca 2574759
Query: 726 ccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttgtca 785
||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 2574758 ccgatatatagatgattggttggcacatatacactgcacagttcttcatcacctttgtca 2574699
Query: 786 gtctg 790
|||||
Sbjct: 2574698 gtctg 2574694
Score = 113 bits (57), Expect = 2e-022
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 804 gatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttct 863
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 2574041 gatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgcaacttct 2573982
Query: 864 ttgaaagcagtcgtattttgatctg 888
|| || || || |||||||||||||
Sbjct: 2573981 ttaaatgccgttgtattttgatctg 2573957
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||| || | ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct: 2573018 accaaatatatcaaatccaagctttgcatacagtggactgaaaaatccatcaacaaactt 2572959
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactac 1162
|| ||||||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 2572958 aacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaagaactac 2572908
Score = 61.9 bits (31), Expect = 8e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||||
Sbjct: 2572812 catcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgcct 2572758
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttc 661
|||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 2574995 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttc 2574951
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05,
complete sequence
Length = 109126
Score = 147 bits (74), Expect = 2e-032
Identities = 143/166 (86%)
Strand = Plus / Minus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
||||||||| |||||||| |||||||| ||||| |||||||| || |||||||| ||||
Sbjct: 54909 ctggtgaaacagcagtgctaacttgcttcgatgcagaatatatgtgccttacaaaaggca 54850
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
||||||| |||||||| || || | ||| |||| |||||||| ||||||||||||||||
Sbjct: 54849 ttttcttaataaaccattctccaatccaaaagacagttgaacccacccatgaagaaacaa 54790
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaag 1051
|||||||||| || |||||||||| || ||||||||||| |||||
Sbjct: 54789 atattccaactaggaatatgaatagcaaggaagtcaaaaacccaag 54744
Score = 129 bits (65), Expect = 4e-027
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 666 ccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatgtca 725
|||||||||||||| ||||| || ||||| ||||||||||| | |||| || ||||||
Sbjct: 56059 ccttctcgaatggacaaattcggccttataatctcctcagacctaaccaagaagatgtca 56000
Query: 726 ccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttgtca 785
||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 55999 ccgatatatagatgattggttggcacatatacactgcacagttcttcatcacctttgtca 55940
Query: 786 gtctg 790
|||||
Sbjct: 55939 gtctg 55935
Score = 113 bits (57), Expect = 2e-022
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 804 gatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttct 863
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 55282 gatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgcaacttct 55223
Query: 864 ttgaaagcagtcgtattttgatctg 888
|| || || || |||||||||||||
Sbjct: 55222 ttaaatgccgttgtattttgatctg 55198
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||| || | ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct: 54259 accaaatatatcaaatccaagctttgcatacagtggactgaaaaatccatcaacaaactt 54200
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactac 1162
|| ||||||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 54199 aacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaagaactac 54149
Score = 61.9 bits (31), Expect = 8e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||||
Sbjct: 54053 catcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgcct 53999
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttc 661
|||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 56236 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttc 56192
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 147 bits (74), Expect = 2e-032
Identities = 143/166 (86%)
Strand = Plus / Minus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
||||||||| |||||||| |||||||| ||||| |||||||| || |||||||| ||||
Sbjct: 3605583 ctggtgaaacagcagtgctaacttgcttcgatgcagaatatatgtgccttacaaaaggca 3605524
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
||||||| |||||||| || || | ||| |||| |||||||| ||||||||||||||||
Sbjct: 3605523 ttttcttaataaaccattctccaatccaaaagacagttgaacccacccatgaagaaacaa 3605464
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaag 1051
|||||||||| || |||||||||| || ||||||||||| |||||
Sbjct: 3605463 atattccaactaggaatatgaatagcaaggaagtcaaaaacccaag 3605418
Score = 129 bits (65), Expect = 4e-027
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 666 ccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatgtca 725
|||||||||||||| ||||| || ||||| ||||||||||| | |||| || ||||||
Sbjct: 3606733 ccttctcgaatggacaaattcggccttataatctcctcagacctaaccaagaagatgtca 3606674
Query: 726 ccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttgtca 785
||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 3606673 ccgatatatagatgattggttggcacatatacactgcacagttcttcatcacctttgtca 3606614
Query: 786 gtctg 790
|||||
Sbjct: 3606613 gtctg 3606609
Score = 113 bits (57), Expect = 2e-022
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 804 gatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttct 863
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 3605956 gatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgcaacttct 3605897
Query: 864 ttgaaagcagtcgtattttgatctg 888
|| || || || |||||||||||||
Sbjct: 3605896 ttaaatgccgttgtattttgatctg 3605872
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||| || | ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct: 3604933 accaaatatatcaaatccaagctttgcatacagtggactgaaaaatccatcaacaaactt 3604874
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactac 1162
|| ||||||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 3604873 aacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaagaactac 3604823
Score = 61.9 bits (31), Expect = 8e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||||
Sbjct: 3604727 catcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgcct 3604673
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttc 661
|||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 3606910 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttc 3606866
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1101 tcaacaaattgaataaaccaccatgtgatgaagaa 1135
|||||||| ||||| ||||||||||||||| ||||
Sbjct: 8460350 tcaacaaaatgaatgaaccaccatgtgatgtagaa 8460384
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 803 tgatgttatgaatccaaatgcatattcaccaattcgtggatg 844
|||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 8459601 tgatgtaatgaaaccaaatgcatattctccaatacgaggatg 8459642
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 147 bits (74), Expect = 2e-032
Identities = 143/166 (86%)
Strand = Plus / Minus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
||||||||| |||||||| |||||||| ||||| |||||||| || |||||||| ||||
Sbjct: 20905896 ctggtgaaacagcagtgctaacttgcttcgatgcagaatatatgtgccttacaaaaggca 20905837
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
||||||| |||||||| || || | ||| |||| |||||||| ||||||||||||||||
Sbjct: 20905836 ttttcttaataaaccattctccaatccaaaagacagttgaacccacccatgaagaaacaa 20905777
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaag 1051
|||||||||| || |||||||||| || ||||||||||| |||||
Sbjct: 20905776 atattccaactaggaatatgaatagcaaggaagtcaaaaacccaag 20905731
Score = 129 bits (65), Expect = 4e-027
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 666 ccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatgtca 725
|||||||||||||| ||||| || ||||| ||||||||||| | |||| || ||||||
Sbjct: 20907046 ccttctcgaatggacaaattcggccttataatctcctcagacctaaccaagaagatgtca 20906987
Query: 726 ccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttgtca 785
||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 20906986 ccgatatatagatgattggttggcacatatacactgcacagttcttcatcacctttgtca 20906927
Query: 786 gtctg 790
|||||
Sbjct: 20906926 gtctg 20906922
Score = 113 bits (57), Expect = 2e-022
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 804 gatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttct 863
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 20906269 gatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgcaacttct 20906210
Query: 864 ttgaaagcagtcgtattttgatctg 888
|| || || || |||||||||||||
Sbjct: 20906209 ttaaatgccgttgtattttgatctg 20906185
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||| || | ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct: 20905246 accaaatatatcaaatccaagctttgcatacagtggactgaaaaatccatcaacaaactt 20905187
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactac 1162
|| ||||||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 20905186 aacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaagaactac 20905136
Score = 61.9 bits (31), Expect = 8e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||||
Sbjct: 20905040 catcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgcct 20904986
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttc 661
|||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 20907223 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttc 20907179
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1101 tcaacaaattgaataaaccaccatgtgatgaagaa 1135
|||||||| ||||| ||||||||||||||| ||||
Sbjct: 25760663 tcaacaaaatgaatgaaccaccatgtgatgtagaa 25760697
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 803 tgatgttatgaatccaaatgcatattcaccaattcgtggatg 844
|||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 25759914 tgatgtaatgaaaccaaatgcatattctccaatacgaggatg 25759955
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 147 bits (74), Expect = 2e-032
Identities = 143/166 (86%)
Strand = Plus / Minus
Query: 886 ctggtgaaattgcagtgctgacttgctttgatgctgaatatatatgtcttacaaatggca 945
||||||||| |||||||| |||||||| ||||| |||||||| || |||||||| ||||
Sbjct: 21268303 ctggtgaaacagcagtgctaacttgcttcgatgcagaatatatgtgccttacaaaaggca 21268244
Query: 946 ttttctttataaaccactcgcccacccagaagatggttgaaccaacccatgaagaaacaa 1005
||||||| |||||||| || || | ||| |||| |||||||| ||||||||||||||||
Sbjct: 21268243 ttttcttaataaaccattctccaatccaaaagacagttgaacccacccatgaagaaacaa 21268184
Query: 1006 atattccaaccagaaatatgaataccagagaagtcaaaaaaccaag 1051
|||||||||| || |||||||||| || ||||||||||| |||||
Sbjct: 21268183 atattccaactaggaatatgaatagcaaggaagtcaaaaacccaag 21268138
Score = 129 bits (65), Expect = 4e-027
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 666 ccttctcgaatggataaattaggtcttatgatctcctcagagttcaccagaaatatgtca 725
|||||||||||||| ||||| || ||||| ||||||||||| | |||| || ||||||
Sbjct: 21269453 ccttctcgaatggacaaattcggccttataatctcctcagacctaaccaagaagatgtca 21269394
Query: 726 ccgatgtatagatgatttgttggcacatacacactacacagttcttcatcgcctttgtca 785
||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 21269393 ccgatatatagatgattggttggcacatatacactgcacagttcttcatcacctttgtca 21269334
Query: 786 gtctg 790
|||||
Sbjct: 21269333 gtctg 21269329
Score = 113 bits (57), Expect = 2e-022
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 804 gatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttct 863
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 21268676 gatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgcaacttct 21268617
Query: 864 ttgaaagcagtcgtattttgatctg 888
|| || || || |||||||||||||
Sbjct: 21268616 ttaaatgccgttgtattttgatctg 21268592
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 1052 accaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaacaaattg 1111
||||||||| || | ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct: 21267653 accaaatatatcaaatccaagctttgcatacagtggactgaaaaatccatcaacaaactt 21267594
Query: 1112 aataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactac 1162
|| ||||||||| ||||||||||| || || |||||||| ||||| |||||
Sbjct: 21267593 aacaaaccaccaggtgatgaagaatgtaacagcaacagggaaaagaactac 21267543
Score = 61.9 bits (31), Expect = 8e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 1164 catccagtcataaactttcttgagacccaactttgaagaacagcacagcatgcct 1218
||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||||
Sbjct: 21267447 catcctgtcataaattttcttgacacccagctttgaagaacagcaaaacatgcct 21267393
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttc 661
|||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 21269630 tgcaatcacctgcggcatggtcattcctccagaaacaatgatttc 21269586
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1101 tcaacaaattgaataaaccaccatgtgatgaagaa 1135
|||||||| ||||| ||||||||||||||| ||||
Sbjct: 26074310 tcaacaaaatgaatgaaccaccatgtgatgtagaa 26074344
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 803 tgatgttatgaatccaaatgcatattcaccaattcgtggatg 844
|||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 26073561 tgatgtaatgaaaccaaatgcatattctccaatacgaggatg 26073602
>gb|AU094034.1|AU094034 AU094034 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1952, mRNA sequence
Length = 609
Score = 135 bits (68), Expect = 7e-029
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 154 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 95
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaa-tt 685
|| || || ||||||||||| || ||||||||||| ||||||||||||||||||||| ||
Sbjct: 94 tgtggnatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 35
Query: 686 aggtcttatgatctcctcagagttcaccagaaat 719
|| ||||| ||||||||||||||||||||||||
Sbjct: 34 gggncttattatctcctcagagttcaccagaaat 1
>gb|CF309705.1|CF309705 ABF--03-P22.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-P22, mRNA sequence
Length = 551
Score = 129 bits (65), Expect = 4e-027
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 567 attctatttagacgaatgttctggcttttccgtggcatgggctccagtgatgcaatcacc 626
|||||||||||||| || |||||||| |||| ||| |||| || || || || ||||||
Sbjct: 415 attctatttagacggatattctggctcttccttggggtgggttcaagggacgcgatcacc 474
Query: 627 tgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggataaatta 686
|| ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 475 tgtggcatagtcattcctccagaaacaattatttcgattccttctcgaatggataaattt 534
Query: 687 ggtcttatgatctcctc 703
|||||||| ||||||||
Sbjct: 535 ggtcttattatctcctc 551
>gb|C19452.1|C19452 C19452 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10436_1A, mRNA sequence
Length = 382
Score = 127 bits (64), Expect = 2e-026
Identities = 125/144 (86%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 1086 ggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtgactgca 1145
||||||||||| ||||||||||| | || ||||||||| ||||||||||| || || |||
Sbjct: 379 ggactgaaaaatccatcaacaaacttaacaaaccaccaggtgatgaagaatgtaacagca 320
Query: 1146 acaggaaaaaggactacacatccagtcataaactttcttgagacccaactttgaagaaca 1205
||||| ||||| ||||| ||||| |||||||| |||||||| ||||| ||||||||||||
Sbjct: 319 acagggaaaagaactacgcatcctgtcataaattttcttgacacccagctttgaagaaca 260
Query: 1206 gcacagcatgccttgcgtgtggag 1229
||| | |||| |||||| ||||||
Sbjct: 259 gcaaaacatg-cttgcgggtggag 237
>gb|CF326437.1|CF326437 JMT1--06-A24.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--06-A24, mRNA sequence
Length = 696
Score = 101 bits (51), Expect = 9e-019
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 804 gatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttct 863
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 87 gatgttatgaatccaaatgcatattcaccaatacggggatgactaattattgcaacttct 28
Query: 864 ttgaaagcagtcgtatttt 882
|| || || || |||||||
Sbjct: 27 ttaaatgccgttgtatttt 9
>gb|C97539.1|C97539 C97539 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60342_8Z, mRNA sequence
Length = 500
Score = 97.6 bits (49), Expect = 1e-017
Identities = 127/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 617 tgcaatcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaat 676
|||||||||||| ||||||||||| ||||| || ||||| ||||| | |||||||||||
Sbjct: 150 tgcaatcacctgcggcatggtcat-cctccagaaacaatgatttctancccttctcgaat 92
Query: 677 ggataaattaggtcttatgatctcctcagagttcaccagaaatatgtcaccgatgtatag 736
||| ||||| || ||||| ||||||||||| | |||| || ||| ||||||| |||||
Sbjct: 91 ggacaaattcggccttataatctcctcagacctaaccaagaagatgncaccgatatatag 32
Query: 737 atgatttgttggcacatacacactacacagt 767
|||| | ||||||||||| ||||| ||||||
Sbjct: 31 atga-tggttggcacatatacactgcacagt 2
>dbj|AK071119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M07, full
insert sequence
Length = 1309
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 936 acaaatggcattttctttataaaccactcgccca 969
|||||||||||| |||||||||||||||| ||||
Sbjct: 550 acaaatggcattctctttataaaccactctccca 517
Score = 52.0 bits (26), Expect = 8e-004
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 1091 gaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtgactgcaacagg 1150
|||||| ||||| ||||| ||| |||||||||||||| |||| || ||||||| ||
Sbjct: 395 gaaaaacccatccacaaagcgaaagaaccaccatgtgatatagaatgtaactgcaagtgg 336
Query: 1151 aaaaaggactacacatccagtcataaactt 1180
||| |||| ||||||||| ||||| |||||
Sbjct: 335 aaagaggattacacatccggtcatgaactt 306
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 676 atgaatccaaatgcatattcgccaattc 649
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 781 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 727
>gb|AACV01003836.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003836, whole
genome shotgun sequence
Length = 32497
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 936 acaaatggcattttctttataaaccactcgccca 969
|||||||||||| |||||||||||||||| ||||
Sbjct: 24421 acaaatggcattctctttataaaccactctccca 24388
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 24622 atgaatccaaatgcatattcgccaattc 24595
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 26237 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 26183
>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0693E08
Length = 157969
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 936 acaaatggcattttctttataaaccactcgccca 969
|||||||||||| |||||||||||||||| ||||
Sbjct: 83609 acaaatggcattctctttataaaccactctccca 83642
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 83408 atgaatccaaatgcatattcgccaattc 83435
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 81793 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 81847
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 936 acaaatggcattttctttataaaccactcgccca 969
|||||||||||| |||||||||||||||| ||||
Sbjct: 3649773 acaaatggcattctctttataaaccactctccca 3649806
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 3649572 atgaatccaaatgcatattcgccaattc 3649599
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 3647957 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 3648011
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 936 acaaatggcattttctttataaaccactcgccca 969
|||||||||||| |||||||||||||||| ||||
Sbjct: 9679439 acaaatggcattctctttataaaccactctccca 9679472
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 9679238 atgaatccaaatgcatattcgccaattc 9679265
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 9677623 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 9677677
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 936 acaaatggcattttctttataaaccactcgccca 969
|||||||||||| |||||||||||||||| ||||
Sbjct: 9679439 acaaatggcattctctttataaaccactctccca 9679472
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 9679238 atgaatccaaatgcatattcgccaattc 9679265
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 9677623 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 9677677
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 936 acaaatggcattttctttataaaccactcgccca 969
|||||||||||| |||||||||||||||| ||||
Sbjct: 9619391 acaaatggcattctctttataaaccactctccca 9619424
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 9619190 atgaatccaaatgcatattcgccaattc 9619217
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 9617575 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 9617629
>gb|AU030027.1|AU030027 AU030027 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50520_1A, mRNA sequence
Length = 366
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 94 atgaatccaaatgcatattcgccaattc 67
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 199 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 145
>gb|AU030028.1|AU030028 AU030028 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50520_2Z, mRNA sequence
Length = 707
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 810 atgaatccaaatgcatattcaccaattc 837
|||||||||||||||||||| |||||||
Sbjct: 154 atgaatccaaatgcatattcgccaattc 127
Score = 46.1 bits (23), Expect = 0.046
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 705 gagttcaccagaaatatgtcaccgatgtatagatgatttgttggcacatacacac 759
||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||||
Sbjct: 259 gagttgaccagaaatatgtccccaatgtagagatggttggttggtacatatacac 205
>dbj|AK059220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D01, full
insert sequence
Length = 1170
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1101 tcaacaaattgaataaaccaccatgtgatgaagaa 1135
|||||||| ||||| ||||||||||||||| ||||
Sbjct: 405 tcaacaaaatgaatgaaccaccatgtgatgtagaa 371
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 803 tgatgttatgaatccaaatgcatattcaccaattcgtggatg 844
|||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 703 tgatgtaatgaaaccaaatgcatattctccaatacgaggatg 662
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,181,353
Number of Sequences: 438736
Number of extensions: 2181353
Number of successful extensions: 23134
Number of sequences better than 0.5: 60
Number of HSP's better than 0.5 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22278
Number of HSP's gapped (non-prelim): 836
length of query: 1264
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1243
effective length of database: 2,791,206,460
effective search space: 3469469629780
effective search space used: 3469469629780
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)