BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430769.2.1
(617 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB650869.1|CB650869 OSJNEb15J05.f OSJNEb Oryza sativa (j... 190 6e-046
gb|CB651300.1|CB651300 OSJNEb16D09.f OSJNEb Oryza sativa (j... 190 6e-046
gb|CB651301.1|CB651301 OSJNEb16D09.r OSJNEb Oryza sativa (j... 190 6e-046
gb|CB680447.1|CB680447 OSJNEf05C19.r OSJNEf Oryza sativa (j... 190 6e-046
gb|CV721863.1|CV721863 YBH--05-J11.b1 Rice before heading y... 190 6e-046
dbj|AK071482.1| Oryza sativa (japonica cultivar-group) cDNA... 190 6e-046
dbj|AK104326.1| Oryza sativa (japonica cultivar-group) cDNA... 190 6e-046
dbj|AK104801.1| Oryza sativa (japonica cultivar-group) cDNA... 190 6e-046
gb|AY644637.1| Oryza sativa (japonica cultivar-group) caffe... 190 6e-046
dbj|AP000364.1| Oryza sativa (japonica cultivar-group) geno... 190 6e-046
gb|AACV01018795.1| Oryza sativa (japonica cultivar-group) c... 190 6e-046
ref|XM_483167.1| Oryza sativa (japonica cultivar-group), mRNA 190 6e-046
ref|XM_507281.2| PREDICTED Oryza sativa (japonica cultivar-... 190 6e-046
ref|XM_507591.1| PREDICTED Oryza sativa (japonica cultivar-... 190 6e-046
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 190 6e-046
dbj|AB110168.1| Oryza sativa (japonica cultivar-group) mRNA... 190 6e-046
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 190 6e-046
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 190 6e-046
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 190 6e-046
gb|AU164542.1|AU164542 AU164542 Rice root Oryza sativa (jap... 184 4e-044
gb|AU197917.1|AU197917 AU197917 Rice green shoot Oryza sati... 184 4e-044
gb|AU197920.1|AU197920 AU197920 Rice green shoot Oryza sati... 184 4e-044
gb|AU101479.1|AU101479 AU101479 Rice immature leaf includin... 182 1e-043
gb|AU184482.1|AU184482 AU184482 Rice root Oryza sativa (jap... 180 6e-043
gb|CV721179.1|CV721179 YBH--03-D01.b1 Rice before heading y... 180 6e-043
gb|AU162815.1|AU162815 AU162815 Rice green shoot Oryza sati... 174 4e-041
gb|AU162915.1|AU162915 AU162915 Rice green shoot Oryza sati... 174 4e-041
gb|AU030740.1|AU030740 AU030740 Rice cDNA from immature lea... 167 9e-039
gb|AU095774.1|AU095774 AU095774 Rice green shoot Oryza sati... 163 1e-037
gb|AU096666.1|AU096666 AU096666 Rice green shoot Oryza sati... 163 1e-037
gb|AU096741.1|AU096741 AU096741 Rice green shoot Oryza sati... 159 2e-036
gb|CX728127.1|CX728127 OSJNEe01K02.r OSJNEe Oryza sativa (j... 157 9e-036
gb|CA755835.1|CA755835 BR030029000_PLATE_D01_4_012.ab1 OA O... 151 5e-034
gb|AU095746.1|AU095746 AU095746 Rice green shoot Oryza sati... 147 8e-033
gb|AU095745.1|AU095745 AU095745 Rice green shoot Oryza sati... 145 3e-032
gb|CF589246.1|CF589246 EST00H03 Subtracted cDNA library of ... 145 3e-032
gb|CB650397.1|CB650397 OSJNEb14N03.f OSJNEb Oryza sativa (j... 143 1e-031
gb|AU057626.1|AU057626 AU057626 Oryza sativa mature leaf Ni... 135 3e-029
gb|AU197908.1|AU197908 AU197908 Rice green shoot Oryza sati... 135 3e-029
gb|AU057944.1|AU057944 AU057944 Oryza sativa mature leaf Ni... 129 2e-027
gb|BP184507.1|BP184507 BP184507 pNS rice panicle cDNA, germ... 119 2e-024
gb|BP184560.1|BP184560 BP184560 pNS rice panicle cDNA, flow... 111 5e-022
gb|AU164541.1|AU164541 AU164541 Rice root Oryza sativa (jap... 109 2e-021
gb|AU197965.1|AU197965 AU197965 Rice green shoot Oryza sati... 105 3e-020
gb|D48033.1|D48033 RICS13955A Rice green shoot Oryza sativa... 98 7e-018
gb|CB669265.1|CB669265 OSJNEe01K02.f OSJNEe Oryza sativa (j... 96 3e-017
gb|AU198011.1|AU198011 AU198011 Rice green shoot Oryza sati... 92 4e-016
gb|AU096701.1|AU096701 AU096701 Rice green shoot Oryza sati... 86 3e-014
gb|CB682841.1|CB682841 OSJNEf10I23.f OSJNEf Oryza sativa (j... 86 3e-014
gb|CX728657.1|CX728657 OSJNEf10I23.r OSJNEf Oryza sativa (j... 86 3e-014
gb|AU030405.1|AU030405 AU030405 Rice cDNA from immature lea... 84 1e-013
gb|C99197.1|C99197 C99197 Rice panicle at ripening stage Or... 82 4e-013
gb|AU222863.1|AU222863 AU222863 Rice shoot Oryza sativa (ja... 82 4e-013
gb|AU096278.1|AU096278 AU096278 Rice green shoot Oryza sati... 80 2e-012
gb|BP184421.1|BP184421 BP184421 pNS rice panicle cDNA, germ... 80 2e-012
gb|AU032753.1|AU032753 AU032753 Rice green shoot Oryza sati... 74 1e-010
gb|AU058070.1|AU058070 AU058070 Rice panicle (longer than 1... 68 6e-009
gb|AU101378.1|AU101378 AU101378 Rice panicle (longer than 1... 68 6e-009
gb|AU163080.1|AU163080 AU163080 Rice green shoot Oryza sati... 68 6e-009
gb|AU182288.1|AU182288 AU182288 Rice panicle at flowering s... 68 6e-009
gb|AU198028.1|AU198028 AU198028 Rice green shoot Oryza sati... 68 6e-009
gb|CB653599.1|CB653599 OSJNEc04M15.r OSJNEc Oryza sativa (j... 68 6e-009
gb|CF293402.1|CF293402 30DGS--02-J06.g1 Rice leaf plasmid c... 68 6e-009
gb|AU058067.2|AU058067 AU058067 Rice panicle (longer than 1... 68 6e-009
dbj|AK065744.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
gb|AY644636.1| Oryza sativa (japonica cultivar-group) caffe... 68 6e-009
gb|AACV01013091.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
dbj|AB023482.2| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
dbj|AP002536.2| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 68 6e-009
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
gb|AU197418.1|AU197418 AU197418 Rice cDNA from young root O... 66 2e-008
dbj|AK108479.1| Oryza sativa (japonica cultivar-group) cDNA... 64 9e-008
gb|AACV01020268.1| Oryza sativa (japonica cultivar-group) c... 64 9e-008
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 64 9e-008
dbj|AP005392.3| Oryza sativa (japonica cultivar-group) geno... 64 9e-008
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 64 9e-008
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 64 9e-008
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 64 9e-008
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 64 9e-008
gb|CF308395.1|CF308395 ABF--02-D07.g1 ABF3-overexpressing t... 56 2e-005
gb|CO435814.1|CO435814 OsMR880 5MT resistant rice mutant cD... 56 2e-005
dbj|AK061757.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AK065515.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
ref|XM_483169.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
ref|XM_483170.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
ref|XM_507282.1| PREDICTED Oryza sativa (japonica cultivar-... 56 2e-005
dbj|AK106735.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.022
gb|AY644638.1| Oryza sativa (japonica cultivar-group) caffe... 46 0.022
gb|AU182287.1|AU182287 AU182287 Rice panicle at flowering s... 44 0.088
gb|CB653598.1|CB653598 OSJNEc04M15.f OSJNEc Oryza sativa (j... 44 0.088
gb|AACV01030826.1| Oryza sativa (japonica cultivar-group) C... 44 0.088
gb|AACV01030495.1| Oryza sativa (japonica cultivar-group) C... 42 0.35
>gb|CB650869.1|CB650869 OSJNEb15J05.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15J05 5', mRNA sequence
Length = 866
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 819 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 760
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 759 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 700
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 699 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 640
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 639 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 580
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 579 ggcttgtccgcgtccacgaacgcgaagtcgaa 548
>gb|CB651300.1|CB651300 OSJNEb16D09.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16D09 5', mRNA sequence
Length = 641
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 470 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 411
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 410 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 351
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 350 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 291
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 290 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 231
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 230 ggcttgtccgcgtccacgaacgcgaagtcgaa 199
>gb|CB651301.1|CB651301 OSJNEb16D09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16D09 3', mRNA sequence
Length = 774
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 172 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 231
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 232 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 291
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 292 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 351
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 352 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 411
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 412 ggcttgtccgcgtccacgaacgcgaagtcgaa 443
>gb|CB680447.1|CB680447 OSJNEf05C19.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf05C19 3', mRNA sequence
Length = 756
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 261 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 320
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 321 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 380
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 381 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 440
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 441 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 500
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 501 ggcttgtccgcgtccacgaacgcgaagtcgaa 532
>gb|CV721863.1|CV721863 YBH--05-J11.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--05-J11, mRNA sequence
Length = 455
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 342 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 283
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 282 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 223
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 222 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 163
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 162 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 103
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 102 ggcttgtccgcgtccacgaacgcgaagtcgaa 71
>dbj|AK071482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093N24, full
insert sequence
Length = 1098
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 834 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 775
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 774 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 715
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 714 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 655
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 654 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 595
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 594 ggcttgtccgcgtccacgaacgcgaagtcgaa 563
>dbj|AK104326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F10, full
insert sequence
Length = 996
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 825 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 766
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 765 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 706
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 705 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 646
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 645 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 586
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 585 ggcttgtccgcgtccacgaacgcgaagtcgaa 554
>dbj|AK104801.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C03, full
insert sequence
Length = 1096
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 832 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 773
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 772 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 713
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 712 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 653
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 652 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 593
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 592 ggcttgtccgcgtccacgaacgcgaagtcgaa 561
>gb|AY644637.1| Oryza sativa (japonica cultivar-group) caffeoyl-CoA
O-methyltransferase (COA20) gene, complete cds
Length = 1158
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 1054 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 995
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 994 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 935
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 934 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 875
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 874 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 815
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 814 ggcttgtccgcgtccacgaacgcgaagtcgaa 783
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0026F07
Length = 137354
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 87895 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 87954
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 87955 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 88014
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 88015 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 88074
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 88075 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 88134
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 88135 ggcttgtccgcgtccacgaacgcgaagtcgaa 88166
Score = 56.0 bits (28), Expect = 2e-005
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 444 cgcgcaccaggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcga 503
|||||||||| || ||||| ||||||||||| | ||||||| |||||||||||| |
Sbjct: 94725 cgcgcaccagccgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtcca 94784
Query: 504 cgaaggcgaagtcgaa 519
|||| |||||||||||
Sbjct: 94785 cgaacgcgaagtcgaa 94800
Score = 46.1 bits (23), Expect = 0.022
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 253 gcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
||||||||| | |||||||||||||||| || |||| |||| |||||||||||
Sbjct: 98933 gcggcggcacagcgtgacgccgtcggcgacggggagcaggcatgcctcgacgcgg 98987
Score = 42.1 bits (21), Expect = 0.35
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 408 cccacagcgtgttgtcgtacacgac 432
|||||||||||||||||||| ||||
Sbjct: 99091 cccacagcgtgttgtcgtacgcgac 99115
>gb|AACV01018795.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018795, whole
genome shotgun sequence
Length = 16642
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 2244 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 2303
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 2304 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 2363
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 2364 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 2423
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 2424 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 2483
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 2484 ggcttgtccgcgtccacgaacgcgaagtcgaa 2515
Score = 56.0 bits (28), Expect = 2e-005
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 444 cgcgcaccaggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcga 503
|||||||||| || ||||| ||||||||||| | ||||||| |||||||||||| |
Sbjct: 9078 cgcgcaccagccgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtcca 9137
Query: 504 cgaaggcgaagtcgaa 519
|||| |||||||||||
Sbjct: 9138 cgaacgcgaagtcgaa 9153
Score = 46.1 bits (23), Expect = 0.022
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 253 gcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
||||||||| | |||||||||||||||| || |||| |||| |||||||||||
Sbjct: 13286 gcggcggcacagcgtgacgccgtcggcgacggggagcaggcatgcctcgacgcgg 13340
Score = 42.1 bits (21), Expect = 0.35
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 408 cccacagcgtgttgtcgtacacgac 432
|||||||||||||||||||| ||||
Sbjct: 13445 cccacagcgtgttgtcgtacgcgac 13469
>ref|XM_483167.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 996
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 825 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 766
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 765 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 706
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 705 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 646
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 645 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 586
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 585 ggcttgtccgcgtccacgaacgcgaagtcgaa 554
>ref|XM_507281.2| PREDICTED Oryza sativa (japonica cultivar-group), P0026F07.24 mRNA
Length = 1098
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 834 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 775
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 774 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 715
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 714 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 655
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 654 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 595
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 594 ggcttgtccgcgtccacgaacgcgaagtcgaa 563
>ref|XM_507591.1| PREDICTED Oryza sativa (japonica cultivar-group), P0026F07.24 mRNA
Length = 1096
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 832 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 773
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 772 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 713
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 712 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 653
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 652 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 593
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 592 ggcttgtccgcgtccacgaacgcgaagtcgaa 561
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 24341548 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 24341607
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 24341608 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 24341667
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 24341668 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 24341727
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 24341728 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 24341787
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 24341788 ggcttgtccgcgtccacgaacgcgaagtcgaa 24341819
Score = 56.0 bits (28), Expect = 2e-005
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 444 cgcgcaccaggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcga 503
|||||||||| || ||||| ||||||||||| | ||||||| |||||||||||| |
Sbjct: 24348378 cgcgcaccagccgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtcca 24348437
Query: 504 cgaaggcgaagtcgaa 519
|||| |||||||||||
Sbjct: 24348438 cgaacgcgaagtcgaa 24348453
Score = 46.1 bits (23), Expect = 0.022
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 253 gcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
||||||||| | |||||||||||||||| || |||| |||| |||||||||||
Sbjct: 24352586 gcggcggcacagcgtgacgccgtcggcgacggggagcaggcatgcctcgacgcgg 24352640
Score = 42.1 bits (21), Expect = 0.35
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 408 cccacagcgtgttgtcgtacacgac 432
|||||||||||||||||||| ||||
Sbjct: 24352744 cccacagcgtgttgtcgtacgcgac 24352768
>dbj|AB110168.1| Oryza sativa (japonica cultivar-group) mRNA for caffeoyl-CoA
3-O-methyltransferase, complete cds, clone: 12FPR057
Length = 976
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 802 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 743
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 742 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 683
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 682 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 623
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 622 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 563
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 562 ggcttgtccgcgtccacgaacgcgaagtcgaa 531
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 15825878 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 15825937
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 15825938 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 15825997
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 15825998 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 15826057
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 15826058 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 15826117
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 15826118 ggcttgtccgcgtccacgaacgcgaagtcgaa 15826149
Score = 56.0 bits (28), Expect = 2e-005
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 444 cgcgcaccaggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcga 503
|||||||||| || ||||| ||||||||||| | ||||||| |||||||||||| |
Sbjct: 15832712 cgcgcaccagccgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtcca 15832771
Query: 504 cgaaggcgaagtcgaa 519
|||| |||||||||||
Sbjct: 15832772 cgaacgcgaagtcgaa 15832787
Score = 46.1 bits (23), Expect = 0.022
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 253 gcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
||||||||| | |||||||||||||||| || |||| |||| |||||||||||
Sbjct: 15836920 gcggcggcacagcgtgacgccgtcggcgacggggagcaggcatgcctcgacgcgg 15836974
Score = 42.1 bits (21), Expect = 0.35
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 408 cccacagcgtgttgtcgtacacgac 432
|||||||||||||||||||| ||||
Sbjct: 15837079 cccacagcgtgttgtcgtacgcgac 15837103
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 23427884 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 23427943
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 23427944 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 23428003
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 23428004 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 23428063
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 23428064 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 23428123
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 23428124 ggcttgtccgcgtccacgaacgcgaagtcgaa 23428155
Score = 56.0 bits (28), Expect = 2e-005
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 444 cgcgcaccaggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcga 503
|||||||||| || ||||| ||||||||||| | ||||||| |||||||||||| |
Sbjct: 23434718 cgcgcaccagccgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtcca 23434777
Query: 504 cgaaggcgaagtcgaa 519
|||| |||||||||||
Sbjct: 23434778 cgaacgcgaagtcgaa 23434793
Score = 46.1 bits (23), Expect = 0.022
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 253 gcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
||||||||| | |||||||||||||||| || |||| |||| |||||||||||
Sbjct: 23438926 gcggcggcacagcgtgacgccgtcggcgacggggagcaggcatgcctcgacgcgg 23438980
Score = 42.1 bits (21), Expect = 0.35
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 408 cccacagcgtgttgtcgtacacgac 432
|||||||||||||||||||| ||||
Sbjct: 23439085 cccacagcgtgttgtcgtacgcgac 23439109
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 190 bits (96), Expect = 6e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 24579635 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 24579694
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 24579695 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 24579754
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 24579755 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 24579814
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 24579815 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 24579874
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 24579875 ggcttgtccgcgtccacgaacgcgaagtcgaa 24579906
Score = 56.0 bits (28), Expect = 2e-005
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 444 cgcgcaccaggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcga 503
|||||||||| || ||||| ||||||||||| | ||||||| |||||||||||| |
Sbjct: 24586465 cgcgcaccagccgcagcagccgctcgtggtactcgccgtagttccccttgtcggcgtcca 24586524
Query: 504 cgaaggcgaagtcgaa 519
|||| |||||||||||
Sbjct: 24586525 cgaacgcgaagtcgaa 24586540
Score = 46.1 bits (23), Expect = 0.022
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 253 gcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
||||||||| | |||||||||||||||| || |||| |||| |||||||||||
Sbjct: 24590673 gcggcggcacagcgtgacgccgtcggcgacggggagcaggcatgcctcgacgcgg 24590727
Score = 42.1 bits (21), Expect = 0.35
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 408 cccacagcgtgttgtcgtacacgac 432
|||||||||||||||||||| ||||
Sbjct: 24590831 cccacagcgtgttgtcgtacgcgac 24590855
>gb|AU164542.1|AU164542 AU164542 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0434, mRNA sequence
Length = 671
Score = 184 bits (93), Expect = 4e-044
Identities = 227/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 461 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 402
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||| ||||| ||||| |||
Sbjct: 401 gggtcggcggcgagcctggagttgaggtccctgatggcgacgganaacctccggtccagg 342
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 341 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 282
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 281 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 222
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 221 ggcttgtccgcgtccacgaacgcgaagtcgaa 190
>gb|AU197917.1|AU197917 AU197917 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13162, mRNA sequence
Length = 456
Score = 184 bits (93), Expect = 4e-044
Identities = 225/269 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 269 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 210
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 209 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 150
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 149 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 90
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 89 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 30
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtc 516
|||||||| ||||| ||||| ||||||||
Sbjct: 29 ggcttgtccgcgtccacgaacgcgaagtc 1
>gb|AU197920.1|AU197920 AU197920 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13186, mRNA sequence
Length = 456
Score = 184 bits (93), Expect = 4e-044
Identities = 225/269 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 269 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 210
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 209 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 150
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 149 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 90
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 89 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 30
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtc 516
|||||||| ||||| ||||| ||||||||
Sbjct: 29 ggcttgtccgcgtccacgaacgcgaagtc 1
>gb|AU101479.1|AU101479 AU101479 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50819, mRNA sequence
Length = 614
Score = 182 bits (92), Expect = 1e-043
Identities = 227/272 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 428 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 369
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| | ||| |||
Sbjct: 368 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccagtccagg 309
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 308 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 249
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 248 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 189
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 188 ggcttgtccgcgtccacgaacgcgaagtcgaa 157
>gb|AU184482.1|AU184482 AU184482 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2427, mRNA sequence
Length = 450
Score = 180 bits (91), Expect = 6e-043
Identities = 225/270 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 270 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 211
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||| ||||| ||||| |||
Sbjct: 210 gggtcggcggcgagcctggagttgaggtccctgatggcgacgganaacctccggtccagg 151
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 150 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 91
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 90 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 31
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcg 517
|||||||| ||||| ||||| |||||||||
Sbjct: 30 ggcttgtccgcgtccacgaacgcgaagtcg 1
>gb|CV721179.1|CV721179 YBH--03-D01.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-D01, mRNA sequence
Length = 375
Score = 180 bits (91), Expect = 6e-043
Identities = 225/270 (83%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 303 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 244
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| || || |||
Sbjct: 243 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccgntccagg 184
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 183 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 124
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 123 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttg 64
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcg 517
|||||||| ||||| ||||| |||||||||
Sbjct: 63 ggcttgtccgcgtccacgaacgcgaagtcg 34
>gb|AU162815.1|AU162815 AU162815 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10737, mRNA sequence
Length = 686
Score = 174 bits (88), Expect = 4e-041
Identities = 227/272 (83%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 498 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 439
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 438 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 379
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 378 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 319
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 318 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 260
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 259 ggcttgtccgcgtccacgaacgcgaagtcgaa 228
>gb|AU162915.1|AU162915 AU162915 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13127, mRNA sequence
Length = 611
Score = 174 bits (88), Expect = 4e-041
Identities = 227/272 (83%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 424 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 365
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 364 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 305
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 304 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 245
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 244 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 186
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 185 ggcttgtccgcgtccacgaacgcgaagtcgaa 154
>gb|AU030740.1|AU030740 AU030740 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60171_2Z, mRNA sequence
Length = 639
Score = 167 bits (84), Expect = 9e-039
Identities = 227/272 (83%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 382 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 323
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 322 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 263
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 262 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 203
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 202 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 144
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 143 ggcttgtc-gcgtccacgaacgcgaagtcgaa 113
>gb|AU095774.1|AU095774 AU095774 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10878, mRNA sequence
Length = 611
Score = 163 bits (82), Expect = 1e-037
Identities = 225/272 (82%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 328 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 269
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| ||||||||||| ||| |||||| ||||| |||
Sbjct: 268 gggtcggcggcgagcctggagttgaggnccctgatggcgacggngaacctccggtccagg 209
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 208 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 149
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 148 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 90
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 89 ggcttgtccgcgtccacgaacgcgaagtcgaa 58
>gb|AU096666.1|AU096666 AU096666 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14661, mRNA sequence
Length = 708
Score = 163 bits (82), Expect = 1e-037
Identities = 221/266 (83%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 439 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 380
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 379 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 320
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 319 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 260
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 259 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 201
Query: 488 ggcttgtcggcgtcgacgaaggcgaa 513
|||||||| ||||| ||||| |||||
Sbjct: 200 ggcttgtccgcgtccacgaacgcgaa 175
>gb|AU096741.1|AU096741 AU096741 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14884, mRNA sequence
Length = 598
Score = 159 bits (80), Expect = 2e-036
Identities = 226/272 (83%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 452 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 393
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 392 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 333
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || | |||||| || ||||||||||||||||||||||||
Sbjct: 332 tccgacagcggcgtgtccggcggca-cgccaccgtgccggcccacagcgtgttgtcgtac 274
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 273 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 215
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 214 ggcttgtccgcgtccacgaacgcgaagtcgaa 183
>gb|CX728127.1|CX728127 OSJNEe01K02.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01K02 3', mRNA sequence
Length = 432
Score = 157 bits (79), Expect = 9e-036
Identities = 199/239 (83%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 191 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 250
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 251 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 310
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 311 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 370
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtt 486
|||| | || |||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 371 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagtt 429
>gb|CA755835.1|CA755835 BR030029000_PLATE_D01_4_012.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030029000_PLATE_D01_4_012.ab1 similar to ESTs
AU030740(E60171),AU030739(E60171) correspond to a region
of the predicted gene.Similar to Populus tremuloides
caffeoyl-CoA 3-O-methyltransferase. (U27116) [Oryza
sativa (japonica cultivar-group)], mRNA sequence
Length = 877
Score = 151 bits (76), Expect = 5e-034
Identities = 205/248 (82%)
Strand = Plus / Minus
Query: 272 ccgtcggcgatggcgagctggcagacctcgacgcggggatcctgagaaagccggacgttg 331
|||||||||||||| ||||||||||| |||| ||| || || | |||| | ||||
Sbjct: 877 ccgtcggcgatggcaagctggcagacgtcgatgcgcgggtcggcggcgagcctggagttg 818
Query: 332 agttccctgatggcggcggagaacctgcggtcgaggtcgctgagcggcgcgtcgggggga 391
|| |||||||||||| |||||||||| ||||| ||||| ||||||| ||| || ||
Sbjct: 817 aggtccctgatggcgacggagaacctccggtccaggtccgacagcggcgtgtccggcggc 758
Query: 392 agcgccacagtaccggcccacagcgtgttgtcgtacacgacggtacccccgacgcgcacc 451
|||||||| || |||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 757 agcgccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcgcacc 698
Query: 452 aggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcgacgaaggcg 511
|| | ||||| |||||||||||| ||||||||| |||||||| ||||| ||||| |||
Sbjct: 697 agctgcagcagctgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaacgcg 638
Query: 512 aagtcgaa 519
||||||||
Sbjct: 637 aagtcgaa 630
>gb|AU095746.1|AU095746 AU095746 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10679, mRNA sequence
Length = 554
Score = 147 bits (74), Expect = 8e-033
Identities = 224/272 (82%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 362 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 303
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| ||||||||| ||||| |||
Sbjct: 302 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaaccnccggtccagg 243
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
| ||||||| ||| || || || ||||| || ||||||||||||||||||||||||
Sbjct: 242 nccgacagcggcgtgtccggcggcag-gccaccgtgccggcccacagcgtgttgtcgtac 184
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtta 487
|||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 183 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-ttg 125
Query: 488 ggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 124 ggcttgtccgcgtccacgaacgcgaagtcgaa 93
>gb|AU095745.1|AU095745 AU095745 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10673, mRNA sequence
Length = 541
Score = 145 bits (73), Expect = 3e-032
Identities = 224/273 (82%), Gaps = 2/273 (0%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 349 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 290
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| ||||||||||| ||||||||| ||||| |||
Sbjct: 289 gggtcggcggcgagcctggagttgaggnccctgatggcgacggagaaccnccggtccagg 230
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagt-accggcccacagcgtgttgtcgta 426
| ||||||| ||| || || |||||||| || |||||||||||||||||||||||
Sbjct: 229 nccgacagcggcgtgtccggcggcagcgccaccgtgnccggcccacagcgtgttgtcgta 170
Query: 427 cacgacggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagtt 486
||||| | || |||||||||||||| | ||||| |||||||||||| |||||| ||
Sbjct: 169 cacgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgta-tt 111
Query: 487 aggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| |||||||||||
Sbjct: 110 gggcttgtccgcgtccacgaacgcgaagtcgaa 78
>gb|CF589246.1|CF589246 EST00H03 Subtracted cDNA library of JA/BTH-treated rice leaf Oryza
sativa (japonica cultivar-group) cDNA clone JBI113, mRNA
sequence
Length = 799
Score = 145 bits (73), Expect = 3e-032
Identities = 157/185 (84%)
Strand = Plus / Minus
Query: 335 tccctgatggcggcggagaacctgcggtcgaggtcgctgagcggcgcgtcggggggaagc 394
|||||||||||| |||||||||| ||||| ||||| ||||||| ||| || || |||
Sbjct: 740 tccctgatggcgacggagaacctccggtccaggtccgacagcggcgtgtccggcggcagc 681
Query: 395 gccacagtaccggcccacagcgtgttgtcgtacacgacggtacccccgacgcgcaccagg 454
||||| || |||||||||||||||||||||||||||| | || ||||||||||||||
Sbjct: 680 gccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcgcaccagc 621
Query: 455 cggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcgacgaaggcgaag 514
| ||||| |||||||||||| ||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 620 tgcagcagctgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaacgcgaag 561
Query: 515 tcgaa 519
|||||
Sbjct: 560 tcgaa 556
Score = 46.1 bits (23), Expect = 0.022
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 276 cggcgatggcgagctggcagacctcga 302
|||||||||||||||||||||| ||||
Sbjct: 799 cggcgatggcgagctggcagacgtcga 773
>gb|CB650397.1|CB650397 OSJNEb14N03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14N03 5', mRNA sequence
Length = 756
Score = 143 bits (72), Expect = 1e-031
Identities = 162/192 (84%)
Strand = Plus / Minus
Query: 328 gttgagttccctgatggcggcggagaacctgcggtcgaggtcgctgagcggcgcgtcggg 387
|||||| ||| |||||||| |||||||||| ||||| ||||| ||||||| ||| ||
Sbjct: 739 gttgaggtccttgatggcgacggagaacctccggtccaggtccgacagcggcgtgtccgg 680
Query: 388 gggaagcgccacagtaccggcccacagcgtgttgtcgtacacgacggtacccccgacgcg 447
|| |||||||| || |||||||||||||||||||||||||||| | || ||||||||
Sbjct: 679 cggcagcgccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcg 620
Query: 448 caccaggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcgacgaa 507
|||||| | ||||| |||||||||||| ||||||||| |||||||| ||||| |||||
Sbjct: 619 caccagctgcagcagctgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaa 560
Query: 508 ggcgaagtcgaa 519
|||||||||||
Sbjct: 559 cgcgaagtcgaa 548
>gb|AU057626.1|AU057626 AU057626 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21628_2Z, mRNA sequence
Length = 464
Score = 135 bits (68), Expect = 3e-029
Identities = 155/184 (84%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 185 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 126
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 125 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 66
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 65 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 6
Query: 428 acga 431
||||
Sbjct: 5 acga 2
>gb|AU197908.1|AU197908 AU197908 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12656, mRNA sequence
Length = 456
Score = 135 bits (68), Expect = 3e-029
Identities = 155/184 (84%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 202 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 143
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 142 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 83
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 82 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcccacagcgtgttgtcgtac 23
Query: 428 acga 431
||||
Sbjct: 22 acga 19
>gb|AU057944.1|AU057944 AU057944 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21928_2Z, mRNA sequence
Length = 635
Score = 129 bits (65), Expect = 2e-027
Identities = 224/273 (82%), Gaps = 3/273 (1%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 354 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgc 295
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 294 gggtcggcggcgagcctggagttgaggtccctgatggcgacggagaacctccggtccagg 235
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || | |||||| || |||||||||||||| |||||||||
Sbjct: 234 tccgacagcggcgtgtccggcggcaacgccaccgtgccggcccacagcgt-ttgtcgtac 176
Query: 428 acgacggtacccccgacgcgcaccaggcggagcagttgctcgt-ggtaccggacgtagtt 486
|||| | || |||||||||||||| | ||||| ||||||| ||||| |||||| ||
Sbjct: 175 acgatgtgcccgccgacgcgcaccagctgcagcagctgctcgtgggtacttgacgta-tt 117
Query: 487 aggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||| ||||| ||||| ||||| |||||
Sbjct: 116 gggcttgtccgcgtccacgaacgcgaaatcgaa 84
>gb|BP184507.1|BP184507 BP184507 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 13FPG013,
mRNA sequence
Length = 686
Score = 119 bits (60), Expect = 2e-024
Identities = 111/128 (86%)
Strand = Plus / Minus
Query: 392 agcgccacagtaccggcccacagcgtgttgtcgtacacgacggtacccccgacgcgcacc 451
|||||||| || |||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 670 agcgccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcgcacc 611
Query: 452 aggcggagcagttgctcgtggtaccggacgtagttaggcttgtcggcgtcgacgaaggcg 511
|| | ||||| |||||||||||| ||||||||| |||||||| ||||| ||||| |||
Sbjct: 610 agttgcagcagctgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaacgcg 551
Query: 512 aagtcgaa 519
||||||||
Sbjct: 550 aagtcgaa 543
>gb|BP184560.1|BP184560 BP184560 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG001, mRNA
sequence
Length = 664
Score = 111 bits (56), Expect = 5e-022
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 404 ccggcccacagcgtgttgtcgtacacgacggtacccccgacgcgcaccaggcggagcagt 463
|||||||||||||||||||||||||||| | || |||||||||||||| | |||||
Sbjct: 664 ccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcgcaccagctgcagcagc 605
Query: 464 tgctcgtggtaccggacgtagttaggcttgtcggcgtcgacgaaggcgaagtcgaa 519
|||||||||||| ||||||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 604 tgctcgtggtacttgacgtagttgggcttgtccgcgtccacgaacgcgaagtcgaa 549
>gb|AU164541.1|AU164541 AU164541 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0434, mRNA sequence
Length = 520
Score = 109 bits (55), Expect = 2e-021
Identities = 126/147 (85%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 374 agcggcgcgtcggggggaagcgccacagtaccgg-cccacagcgtgttgtcgtacacgac 432
||||||| ||| || || |||||||| || |||| ||||||||||||||||||||||||
Sbjct: 495 agcggcgtgtccggcggcagcgccaccgtgccgggcccacagcgtgttgtcgtacacgat 436
Query: 433 ggtacccccgacgcgcaccaggcggagcagttgctcgtggtaccggacgtagttaggctt 492
| | || |||||||||||||| | ||||| |||||||||||| ||||||||| |||||
Sbjct: 435 g-tgccgccgacgcgcaccagctgcagcagctgctcgtggtacttgacgtagttgggctt 377
Query: 493 gtcggcgtcgacgaaggcgaagtcgaa 519
||| ||||| ||||| |||||||||||
Sbjct: 376 gtccgcgtccacgaacgcgaagtcgaa 350
>gb|AU197965.1|AU197965 AU197965 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13955, mRNA sequence
Length = 442
Score = 105 bits (53), Expect = 3e-020
Identities = 124/148 (83%)
Strand = Plus / Minus
Query: 328 gttgagttccctgatggcggcggagaacctgcggtcgaggtcgctgagcggcgcgtcggg 387
|||||| |||||||||||| |||| ||||| ||||| ||||| ||||||| ||| ||
Sbjct: 177 gttgaggtccctgatggcgacgganaacctccggtccaggtccgacagcggcgtgtccgg 118
Query: 388 gggaagcgccacagtaccggcccacagcgtgttgtcgtacacgacggtacccccgacgcg 447
|| |||||||| || |||||||||||||||||||||||||||| | || ||||||||
Sbjct: 117 cggcagcgccaccgtgccggcccacagcgtgttgtcgtacacgatgtgcccgccgacgcg 58
Query: 448 caccaggcggagcagttgctcgtggtac 475
|||||| | ||||| ||||||||||||
Sbjct: 57 caccagctgcagcagctgctcgtggtac 30
Score = 85.7 bits (43), Expect = 3e-014
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcga 302
|||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 257 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcga 203
>gb|D48033.1|D48033 RICS13955A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 316
Score = 97.6 bits (49), Expect = 7e-018
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 411 acagcgtgttgtcgtacacgacggtacccccgacgcgcaccaggcggagcagttgctcgt 470
||||||||||||||||||||| | || |||||||||||||| | ||||| |||||||
Sbjct: 316 acagcgtgttgtcgtacacgatgtgcccgccgacgcgcaccagctgcagcagctgctcgt 257
Query: 471 ggtaccggacgtagttaggcttgtcggcgtcgacgaaggcgaagtcgaa 519
||||| ||||||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 256 ggtacttgacgtagttgggcttgtccgcgtccacgaacgcgaagtcgaa 208
>gb|CB669265.1|CB669265 OSJNEe01K02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01K02 5', mRNA sequence
Length = 383
Score = 95.6 bits (48), Expect = 3e-017
Identities = 150/184 (81%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcgg 307
|||| ||||||||||||||||| ||||||||||||||||||||||||| | |||| |||
Sbjct: 212 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagtcgtcgatgcgc 153
Query: 308 ggatcctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgagg 367
|| || | |||| | |||||| |||||||||| | |||||||||| ||||| |||
Sbjct: 152 gggtcggcggcgagcctggagttgaggtccctgatggagacggagaacctccggtccagg 93
Query: 368 tcgctgagcggcgcgtcggggggaagcgccacagtaccggcccacagcgtgttgtcgtac 427
|| ||||||| ||| || || |||||||| || ||||| ||||||||||||||||
Sbjct: 92 tccgacagcggcgtgtccggcggcagcgccaccgtgccggcgggcagcgtgttgtcgtac 33
Query: 428 acga 431
||||
Sbjct: 32 acga 29
>gb|AU198011.1|AU198011 AU198011 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14978, mRNA sequence
Length = 362
Score = 91.7 bits (46), Expect = 4e-016
Identities = 133/162 (82%)
Strand = Plus / Minus
Query: 253 gcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcgacgcggggatc 312
||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| || ||
Sbjct: 162 gcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcgatgcgcgggtc 103
Query: 313 ctgagaaagccggacgttgagttccctgatggcggcggagaacctgcggtcgaggtcgct 372
| ||||| | |||||| ||||||||||| |||| ||||| ||||| |||||
Sbjct: 102 ggcggcaagcctggagttgaggtccctgatggcaacggaaaacctccggtccaggtccga 43
Query: 373 gagcggcgcgtcggggggaagcgccacagtaccggcccacag 414
||||||| ||| || || |||||||| || |||||||||||
Sbjct: 42 cagcggcgtgtccggcggcagcgccaccgtgccggcccacag 1
>gb|AU096701.1|AU096701 AU096701 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14770, mRNA sequence
Length = 353
Score = 85.7 bits (43), Expect = 3e-014
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcga 302
|||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 84 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcga 30
>gb|CB682841.1|CB682841 OSJNEf10I23.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10I23 5', mRNA sequence
Length = 305
Score = 85.7 bits (43), Expect = 3e-014
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcga 302
|||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 74 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcga 20
>gb|CX728657.1|CX728657 OSJNEf10I23.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10I23 3', mRNA sequence
Length = 286
Score = 85.7 bits (43), Expect = 3e-014
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 248 acgacgcggcggcagatggtgacgccgtcggcgatggcgagctggcagacctcga 302
|||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 213 acgaggcggcggcagatggtgatgccgtcggcgatggcgagctggcagacgtcga 267
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 962,823
Number of Sequences: 438736
Number of extensions: 962823
Number of successful extensions: 27192
Number of sequences better than 0.5: 95
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26377
Number of HSP's gapped (non-prelim): 725
length of query: 617
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 596
effective length of database: 2,791,206,460
effective search space: 1663559050160
effective search space used: 1663559050160
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)