BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419155.2.3
(1354 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|X60374.1|OSRCDC21 O.sativa Rcdc2-1 gene for p34-cdc2 pr... 965 0.0
ref|NM_187661.1| Oryza sativa (japonica cultivar-group), p... 900 0.0
gb|CB658306.1|CB658306 OSJNEc14E05.f OSJNEc Oryza sativa (j... 712 0.0
gb|CB654579.1|CB654579 OSJNEc07D14.f OSJNEc Oryza sativa (j... 702 0.0
dbj|AK120855.1| Oryza sativa (japonica cultivar-group) cDNA... 648 0.0
gb|CB684395.1|CB684395 OSJNEf13N18.f OSJNEf Oryza sativa (j... 624 e-176
gb|CB658307.1|CB658307 OSJNEc14E05.r OSJNEc Oryza sativa (j... 591 e-166
gb|CB654580.1|CB654580 OSJNEc07D14.r OSJNEc Oryza sativa (j... 577 e-162
gb|CB684396.1|CB684396 OSJNEf13N18.r OSJNEf Oryza sativa (j... 563 e-158
gb|D24699.1|D24699 RICR2396A Rice root Oryza sativa (japoni... 454 e-125
gb|AU097391.1|AU097391 AU097391 Rice shoot Oryza sativa (ja... 426 e-116
dbj|AK065932.1| Oryza sativa (japonica cultivar-group) cDNA... 414 e-113
dbj|AK073961.1| Oryza sativa (japonica cultivar-group) cDNA... 406 e-110
gb|CV725111.1|CV725111 14Salt--02-A09.b1 Salt treated rice ... 357 1e-095
gb|CF306845.1|CF306845 HDA1--05-A04.g1 OsHDAC1-overexpressi... 333 1e-088
gb|CB663305.1|CB663305 OSJNEd08B15.r OSJNEd Oryza sativa (j... 321 6e-085
gb|CF327808.1|CF327808 NACL--02-H04.b1 Rice callus plasmid ... 317 9e-084
gb|CF306843.1|CF306843 HDA1--05-A02.g1 OsHDAC1-overexpressi... 283 1e-073
gb|AACV01005772.1| Oryza sativa (japonica cultivar-group) c... 272 5e-070
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 272 5e-070
gb|AC134236.4| Oryza sativa (japonica cultivar-group) chrom... 272 5e-070
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 272 5e-070
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 272 5e-070
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 272 5e-070
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 272 5e-070
gb|AC113930.2| Oryza sativa (japonica cultivar-group) chrom... 268 7e-069
gb|AACV01005750.1| Oryza sativa (japonica cultivar-group) c... 268 7e-069
dbj|AK064363.1| Oryza sativa (japonica cultivar-group) cDNA... 232 4e-058
dbj|AK101344.1| Oryza sativa (japonica cultivar-group) cDNA... 232 4e-058
ref|XM_463932.1| Oryza sativa (japonica cultivar-group), mRNA 232 4e-058
ref|XM_463933.1| Oryza sativa (japonica cultivar-group), mRNA 232 4e-058
emb|X60375.1|OSRCDC22 O.sativa Rcdc2-2 gene for p34-cdc2 pr... 232 4e-058
gb|CF327809.1|CF327809 NACL--02-H04.g1 Rice callus plasmid ... 216 2e-053
dbj|AK062097.1| Oryza sativa (japonica cultivar-group) cDNA... 214 9e-053
gb|CF306524.1|CF306524 HDA1--04-B17.g1 OsHDAC1-overexpressi... 212 4e-052
gb|CF316758.1|CF316758 HD--06-D01.b1 OsHDAC1-overexpressing... 206 2e-050
gb|D40757.1|D40757 RICS2901A Rice shoot Oryza sativa (japon... 202 4e-049
gb|D24771.1|D24771 RICR2531A Rice root Oryza sativa (japoni... 196 2e-047
gb|AU162532.1|AU162532 AU162532 Rice root Oryza sativa (jap... 188 5e-045
gb|C22593.1|C22593 C22593 Rice root Oryza sativa (japonica ... 186 2e-044
gb|C22594.1|C22594 C22594 Rice root Oryza sativa (japonica ... 186 2e-044
gb|CF328672.1|CF328672 NACL--03-K24.g1 Rice callus plasmid ... 186 2e-044
gb|D24174.1|D24174 RICR1468A Rice root Oryza sativa (japoni... 172 3e-040
dbj|AK063438.1| Oryza sativa (japonica cultivar-group) cDNA... 172 3e-040
dbj|AP004885.3| Oryza sativa (japonica cultivar-group) geno... 172 3e-040
gb|AACV01003234.1| Oryza sativa (japonica cultivar-group) c... 172 3e-040
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 172 3e-040
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 172 3e-040
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 172 3e-040
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 172 3e-040
gb|AU031081.1|AU031081 AU031081 Rice cDNA from immature lea... 165 8e-038
gb|C22585.1|C22585 C22585 Rice root Oryza sativa (japonica ... 147 2e-032
gb|AC118980.2| Oryza sativa (japonica cultivar-group) chrom... 145 7e-032
gb|CB642097.1|CB642097 OSJNEb02B15.f OSJNEb Oryza sativa (j... 143 3e-031
gb|AQ865376.1|AQ865376 nbeb0025A12r CUGI Rice BAC Library (... 121 1e-024
gb|AZ132037.1|AZ132037 OSJNBb0057D18f CUGI Rice BAC Library... 121 1e-024
gb|D41784.2|D41784 RICS4593A Rice shoot Oryza sativa (japon... 121 1e-024
gb|AQ864251.1|AQ864251 nbeb0022D24r CUGI Rice BAC Library (... 105 6e-020
gb|AU032263.1|AU032263 AU032263 Rice root Oryza sativa (jap... 88 1e-014
gb|CB659407.1|CB659407 OSJNEc16F23.f OSJNEc Oryza sativa (j... 76 6e-011
gb|CF316759.1|CF316759 HD--06-D01.g1 OsHDAC1-overexpressing... 76 6e-011
dbj|AP004563.1| Oryza sativa (japonica cultivar-group) chro... 76 6e-011
dbj|AP004765.3| Oryza sativa (japonica cultivar-group) geno... 76 6e-011
gb|AACV01018841.1| Oryza sativa (japonica cultivar-group) c... 76 6e-011
ref|XM_483316.1| Oryza sativa (japonica cultivar-group), mRNA 76 6e-011
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 76 6e-011
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 76 6e-011
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 76 6e-011
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 76 6e-011
gb|CF328671.1|CF328671 NACL--03-K24.b1 Rice callus plasmid ... 74 2e-010
gb|C22365.1|C22365 C22365 Rice callus cDNA Oryza sativa (ja... 70 3e-009
gb|CF326823.1|CF326823 NACL--01-B01.b1 Rice callus plasmid ... 68 1e-008
dbj|AK059682.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-008
dbj|AP003316.4| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|AACV01002846.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
ref|NM_190272.1| Oryza sativa (japonica cultivar-group), p... 68 1e-008
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 68 1e-008
dbj|AP003349.4| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|AY873472.1|AY873472 06ET3_288_B_013_067_004B10 Oryza sat... 54 2e-004
gb|AU075463.1|AU075463 AU075463 Rice cDNA from immature lea... 52 8e-004
dbj|AP004239.1| Oryza sativa (japonica cultivar-group) chro... 50 0.003
dbj|AP004844.1| Oryza sativa (japonica cultivar-group) chro... 50 0.003
dbj|AK111691.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK111942.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AACV01013052.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
dbj|AP006533.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 50 0.003
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
emb|AJ535841.1|OSA535841 Oryza sativa (japonica cultivar-gr... 50 0.003
dbj|AB183398.1| Oryza sativa (japonica cultivar-group) MAPK... 50 0.003
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AG021914.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.050
gb|C22678.1|C22678 C22678 Rice etiolated shoot Oryza sativa... 46 0.050
gb|CF304118.1|CF304118 ABF1--04-B20.g1 ABF3-overexpressing ... 46 0.050
gb|CF305162.1|CF305162 ABF1--06-P07.g1 ABF3-overexpressing ... 46 0.050
dbj|AP004339.3| Oryza sativa (japonica cultivar-group) geno... 44 0.20
gb|AACV01016852.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
ref|XM_479239.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.20
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.20
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.20
>emb|X60374.1|OSRCDC21 O.sativa Rcdc2-1 gene for p34-cdc2 protein kinase
Length = 1115
Score = 965 bits (487), Expect = 0.0
Identities = 787/887 (88%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 134 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 193
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 194 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 253
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||||||||| |||||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 254 gatgagggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcac 313
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
|||||||||||||| ||||| |||||| ||||||| |||||||||||||| ||||||||
Sbjct: 314 ggcaacatcgtcaggttacacgatgttatccacagtgagaagcgcatatatcttgtcttt 373
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 374 gagtatctggatctggacctaaagaagttcatggactcttgtccagagtttgcgaaaaac 433
Query: 542 cccactttgatcaagtcatacctctaccagatactccgtggtgttgcgtactgccattct 601
|||||||| || |||||||| ||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 434 cccactttaattaagtcatatctctatcagatactccgcggcgttgcttactgtcattct 493
Query: 602 catagagttcttcaccgagatttgaaacctcagaacttattgatagatcggcgcactaat 661
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 494 catagagttcttcatcgagatttgaaacctcagaatttattgatagatcggcgtactaat 553
Query: 662 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacattt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 554 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgcacgttt 613
Query: 722 actcatgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcag 781
||||| ||||| || || || ||||| ||||||||||| || || |||||| | ||||||
Sbjct: 614 actcacgaggttgtaaccttgtggtatagagctccagagatccttcttggatcaaggcag 673
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaa 841
||||| |||||||||||| ||||||| || || ||||||||||| ||||||||||||||
Sbjct: 674 tattctacaccagttgatatgtggtcagttggttgtatctttgcagaaatggtgaaccag 733
Query: 842 aagccactattccctggcgattctgagatcgacgaactttttaagatattcaggatacta 901
|| ||||| |||||||| ||||||||||| || ||| | ||||||||||||||| |||||
Sbjct: 734 aaaccactgttccctggtgattctgagattgatgaattatttaagatattcagggtacta 793
Query: 902 ggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagct 961
|| || || ||||| || |||||||||||||| || | || ||||||| |||| | |||
Sbjct: 794 ggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagtctgct 853
Query: 962 ttccccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctggg 1021
||||||| ||||||||| ||||| || ||||| | ||||| | |||||||||||||||
Sbjct: 854 ttccccaagtggcaagcacaggatcttgcaactattgtccctactcttgaccctgctggt 913
Query: 1022 ttggaccttctctctaaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaa 1081
|||||||||||||||||||||||||| |||||||||| |||||| |||||||| || ||
Sbjct: 914 ttggaccttctctctaaaatgcttcggtacgagccaaacaaaaggatcacagctagacag 973
Query: 1082 gcacttgagcatgagtacttcaaggaccttgaagtggtacagtgacc 1128
|| ||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 974 gctcttgagcatgaatacttcaaggaccttgagatggtacaatgacc 1020
>ref|NM_187661.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 882
Score = 900 bits (454), Expect = 0.0
Identities = 768/872 (88%), Gaps = 3/872 (0%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||| ||| ||||||| || ||||||||||||||||| |||||||||
Sbjct: 1 atggagcagtacgaggagg---agaagattggagagggcacgtacggggtagtgtacaag 57
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 58 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 117
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 118 gatgagggtgtcccctccaccgccatccgcgagatctcgctcctcaaggagatgcatcac 177
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
||||||||||||| ||||| |||||| ||||||| |||||||||||| ||||||||
Sbjct: 178 cgcaacatcgtcaggttacacgatgttatccacagtgagaagcgcataggtcttgtcttt 237
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 238 gagtatctggatctggacctgaagaagttcatggactcttgtccagagtttgcaaaaaac 297
Query: 542 cccactttgatcaagtcatacctctaccagatactccgtggtgttgcgtactgccattct 601
|||||||| || |||||||| ||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 298 cccactttaattaagtcatatctctatcagatactccgcggcgttgcttactgtcattct 357
Query: 602 catagagttcttcaccgagatttgaaacctcagaacttattgatagatcggcgcactaat 661
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 358 catagagttcttcatcgagatttgaaacctcagaatttattgatagatcggcgtactaat 417
Query: 662 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacattt 721
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 418 acactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgcacattt 477
Query: 722 actcatgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcag 781
||||||||||| || || || ||||| ||||||||||| || || |||||| | ||||||
Sbjct: 478 actcatgaggttgtaaccttgtggtatagagctccagagatccttcttggatcaaggcag 537
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaa 841
||||| |||||||||||| ||||||| || || ||||||||||| ||||||||||||||
Sbjct: 538 tattctacaccagttgatatgtggtcagttggttgtatctttgcagaaatggtgaaccag 597
Query: 842 aagccactattccctggcgattctgagatcgacgaactttttaagatattcaggatacta 901
|| ||||| |||||||| ||||||||||| || ||| | ||||||||||||||| |||||
Sbjct: 598 aaaccactgttccctggtgattctgagattgatgaattatttaagatattcagggtacta 657
Query: 902 ggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagct 961
|| || || ||||| || |||||||||||||| || | || ||||||| |||| | |||
Sbjct: 658 ggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagtctgct 717
Query: 962 ttccccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctggg 1021
||||||| |||||| || |||| || ||||| | ||||| | |||||||||||||||
Sbjct: 718 ttccccaagtggcaggcacaggctcttgcaactattgtccctactcttgaccctgctggt 777
Query: 1022 ttggaccttctctctaaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaa 1081
|||||||||||||||||||||||||| |||||||||| |||||| |||||||| || ||
Sbjct: 778 ttggaccttctctctaaaatgcttcggtacgagccaaacaaaaggatcacagctagacag 837
Query: 1082 gcacttgagcatgagtacttcaaggaccttga 1113
|| |||||||||||||||||||||||||||||
Sbjct: 838 gctcttgagcatgagtacttcaaggaccttga 869
>gb|CB658306.1|CB658306 OSJNEc14E05.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14E05 5', mRNA sequence
Length = 838
Score = 712 bits (359), Expect = 0.0
Identities = 562/629 (89%), Gaps = 3/629 (0%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||| ||| ||||||| || ||||||||||||||||| |||||||||
Sbjct: 204 atggagcagtacgaggagg---agaagattggagagggcacgtacggggtagtgtacaag 260
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 261 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 320
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 321 gatgagggtgtcccctccaccgccatccgcgagatctcgctcctcaaggagatgcatcac 380
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
||||||||||||| ||||| |||||| ||||||| |||||||||||| ||||||||
Sbjct: 381 cgcaacatcgtcaggttacacgatgttatccacagtgagaagcgcataggtcttgtcttt 440
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 441 gagtatctggatctggacctgaagaagttcatggactcttgtccagagtttgcaaaaaac 500
Query: 542 cccactttgatcaagtcatacctctaccagatactccgtggtgttgcgtactgccattct 601
|||||||| || |||||||| ||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 501 cccactttaattaagtcatatctctatcagatactccgcggcgttgcttactgtcattct 560
Query: 602 catagagttcttcaccgagatttgaaacctcagaacttattgatagatcggcgcactaat 661
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 561 catagagttcttcatcgagatttgaaacctcagaatttattgatagatcggcgtactaat 620
Query: 662 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacattt 721
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 acactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgcacattt 680
Query: 722 actcatgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcag 781
||||||||||| || || || ||||| ||||||||||| || || |||||| | ||||||
Sbjct: 681 actcatgaggttgtaaccttgtggtatagagctccagagatccttcttggatcaaggcag 740
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaa 841
||||| |||||||||||| ||||||| || || ||||||||||| ||||||||||||||
Sbjct: 741 tattctacaccagttgatatgtggtcagttggttgtatctttgcagaaatggtgaaccag 800
Query: 842 aagccactattccctggcgattctgagat 870
|| ||||| |||||||| |||||||||||
Sbjct: 801 aaaccactgttccctggtgattctgagat 829
>gb|CB654579.1|CB654579 OSJNEc07D14.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07D14 5', mRNA sequence
Length = 783
Score = 702 bits (354), Expect = 0.0
Identities = 513/566 (90%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 208 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 267
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 268 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 327
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||||||||| |||||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 328 gatgagggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcac 387
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
|||||||||||||| ||||| |||||| ||||||| |||||||||||||| ||||||||
Sbjct: 388 ggcaacatcgtcaggttacacgatgttatccacagtgagaagcgcatatatcttgtcttt 447
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 448 gagtatctggatctggacctaaagaagttcatggactcttgtccagagtttgcgaaaaac 507
Query: 542 cccactttgatcaagtcatacctctaccagatactccgtggtgttgcgtactgccattct 601
|||||||| || |||||||| ||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 508 cccactttaattaagtcatatctctatcagatactccgcggcgttgcttactgtcattct 567
Query: 602 catagagttcttcaccgagatttgaaacctcagaacttattgatagatcggcgcactaat 661
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 568 catagagttcttcatcgagatttgaaacctcagaatttattgatagatcggcgtactaat 627
Query: 662 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacattt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 628 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgcacgttt 687
Query: 722 actcatgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcag 781
||||| ||||| || || || ||||| ||||||||||| || || |||||| | ||||||
Sbjct: 688 actcacgaggttgtaaccttgtggtatagagctccagagatccttcttggatcaaggcag 747
Query: 782 tattccacaccagttgatgtgtggtc 807
||||| |||||||||||| |||||||
Sbjct: 748 tattctacaccagttgatatgtggtc 773
>dbj|AK120855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024C14, full
insert sequence
Length = 723
Score = 648 bits (327), Expect = 0.0
Identities = 450/491 (91%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 230 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 289
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 290 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 349
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||||||||| |||||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 350 gatgagggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcac 409
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
|||||||||||||| ||||| |||||| ||||||| |||||||||||||| ||||||||
Sbjct: 410 ggcaacatcgtcaggttacacgatgttatccacagtgagaagcgcatatatcttgtcttt 469
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 470 gagtatctggatctggacctaaagaagttcatggactcttgtccagagtttgcgaaaaac 529
Query: 542 cccactttgatcaagtcatacctctaccagatactccgtggtgttgcgtactgccattct 601
|||||||| || |||||||| ||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 530 cccactttaattaagtcatatctctatcagatactccgcggcgttgcttactgtcattct 589
Query: 602 catagagttcttcaccgagatttgaaacctcagaacttattgatagatcggcgcactaat 661
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 590 catagagttcttcatcgagatttgaaacctcagaatttattgatagatcggcgtactaat 649
Query: 662 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacattt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 650 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgcacgttt 709
Query: 722 actcatgaggt 732
||||| |||||
Sbjct: 710 actcacgaggt 720
>gb|CB684395.1|CB684395 OSJNEf13N18.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf13N18 5', mRNA sequence
Length = 786
Score = 624 bits (315), Expect = e-176
Identities = 516/583 (88%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||| |
Sbjct: 204 atggagcattacgagaaggaggagaagattggggagggcacgtacggggtggtgtacggg 263
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||| |||||||||||||||| |||||||| || || ||||||
Sbjct: 264 gcgcgggacaagggcaccaacaagacgatcgcgctcaataagatccggcttgaccaggag 323
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| || |||||||| ||| |||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 324 gatgatggcgtcccctccgccgcaatccgcgagatctcgctcctcaaggagatgcatcac 383
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
||||||||||||| ||||| |||||| ||||||| |||||||||||||| ||||||||
Sbjct: 384 agcaacatcgtcaggttacacgatgttatccacagtgagaagcgcatatatcttgtcttt 443
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 444 gagtatctggatctggacctaaagaagttcatggactcttgtccagagtttgcgaaaaac 503
Query: 542 cccactttgatcaagtcatacctctaccagatactccgtggtgttgcgtactgccattct 601
|||||||| || |||||||| ||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 504 cccactttaattaagtcatatctctatcagatactccgcggcgttgcttactgtcattct 563
Query: 602 catagagttcttcaccgagatttgaaacctcagaacttattgatagatcggcgcactaat 661
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 564 catagagttcttcatcgagatttgaaacctcagaatttattgatagatcggcgtactaat 623
Query: 662 gcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacattt 721
||||||||||||||| |||||||||||||||| |||||||||||||||||||| || |||
Sbjct: 624 gcactgaagcttgcacactttggtttagccagcgcatttggaattcctgtccgcacgttt 683
Query: 722 actcatgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcag 781
||||| ||||| || || || ||||| ||||||||||| || || |||||| | ||||||
Sbjct: 684 actcacgaggttgtaaccttgtggtatagagctccagagatccttcttggatcaaggcag 743
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
||||| |||||| ||||| ||||||| || || ||||||||||
Sbjct: 744 tattctacaccaattgatatgtggtcagttggttgtatctttg 786
>gb|CB658307.1|CB658307 OSJNEc14E05.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14E05 3', mRNA sequence
Length = 783
Score = 591 bits (298), Expect = e-166
Identities = 526/602 (87%)
Strand = Plus / Minus
Query: 527 gagtttgctaagaatcccactttgatcaagtcatacctctaccagatactccgtggtgtt 586
|||||||| || || |||||||| || |||||||| ||||| ||||||||||| || |||
Sbjct: 779 gagtttgcaaaaaaccccactttaattaagtcatatctctatcagatactccgcggcgtt 720
Query: 587 gcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattgata 646
|| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 719 gcttactgtcattctcatagagttcttcatcgagatttgaaacctcagaatttattgata 660
Query: 647 gatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaatt 706
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gatcggcgtactaatacactgaagcttgcagactttggtttagccagggcatttggaatt 600
Query: 707 cctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattctg 766
|||||||| ||||||||||||||||| || || || ||||| ||||||||||| || ||
Sbjct: 599 cctgtccgcacatttactcatgaggttgtaaccttgtggtatagagctccagagatcctt 540
Query: 767 cttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttgcg 826
|||||| | ||||||||||| |||||||||||| ||||||| || || |||||||||||
Sbjct: 539 cttggatcaaggcagtattctacaccagttgatatgtggtcagttggttgtatctttgca 480
Query: 827 gaaatggtgaaccaaaagccactattccctggcgattctgagatcgacgaactttttaag 886
|||||||||||||| || ||||| |||||||| ||||||||||| || ||| | ||||||
Sbjct: 479 gaaatggtgaaccagaaaccactgttccctggtgattctgagattgatgaattatttaag 420
Query: 887 atattcaggatactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcct 946
||||||||| ||||||| || || ||||| || |||||||||||||| || | || |||
Sbjct: 419 atattcagggtactaggaactccaaatgaacaaagttggccaggagttagctcattacct 360
Query: 947 gacttcaagacagctttccccaggtggcaagctcaggacctggcaacagtagtcccaaat 1006
|||| |||| | |||||||||| |||||| || |||| || ||||| | ||||| | |
Sbjct: 359 gactacaagtctgctttccccaagtggcaggcacaggctcttgcaactattgtccctact 300
Query: 1007 cttgaccctgctgggttggaccttctctctaaaatgcttcgatacgagccaagcaaaaga 1066
|||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 299 cttgaccctgctggtttggaccttctctctaaaatgcttcggtacgagccaaacaaaagg 240
Query: 1067 atcacagcgaggcaagcacttgagcatgagtacttcaaggaccttgaagtggtacagtga 1126
|||||||| || || || ||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 239 atcacagctagacaggctcttgagcatgagtacttcaaggaccttgagatggtacaatga 180
Query: 1127 cc 1128
||
Sbjct: 179 cc 178
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 91 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 47
>gb|CB654580.1|CB654580 OSJNEc07D14.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07D14 3', mRNA sequence
Length = 807
Score = 577 bits (291), Expect = e-162
Identities = 504/575 (87%)
Strand = Plus / Minus
Query: 554 aagtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttctt 613
|||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||||||
Sbjct: 800 aagtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttctt 741
Query: 614 caccgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagctt 673
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 740 catcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagctt 681
Query: 674 gcagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 680 gcagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggtt 621
Query: 734 gtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattccacacca 793
|| || || ||||| ||||||||||| || || |||||| | ||||||||||| ||||||
Sbjct: 620 gtaaccttgtggtatagagctccagagatccttcttggatcaaggcagtattctacacca 561
Query: 794 gttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattc 853
|||||| ||||||| || || ||||||||||| |||||||||||||| || ||||| |||
Sbjct: 560 gttgatatgtggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttc 501
Query: 854 cctggcgattctgagatcgacgaactttttaagatattcaggatactaggtacaccgaat 913
||||| ||||||||||| || ||| | ||||||||||||||| ||||||| || || |||
Sbjct: 500 cctggtgattctgagattgatgaattatttaagatattcagggtactaggaactccaaat 441
Query: 914 gagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccaggtgg 973
|| || |||||||||||||| || | || ||||||| |||| | |||||||||| ||||
Sbjct: 440 gaacaaagttggccaggagttagctcattacctgactacaagtctgctttccccaagtgg 381
Query: 974 caagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggaccttctc 1033
||||| ||||| || ||||| | ||||| | ||||||||||||||| ||||||||||||
Sbjct: 380 caagcacaggatcttgcaactattgtccctactcttgaccctgctggtttggaccttctc 321
Query: 1034 tctaaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcat 1093
|||||||||||||| |||||||||| |||||| |||||||| || || || |||||||||
Sbjct: 320 tctaaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcat 261
Query: 1094 gagtacttcaaggaccttgaagtggtacagtgacc 1128
|| ||||||||||||||||| ||||||| |||||
Sbjct: 260 gaatacttcaaggaccttgagatggtacaatgacc 226
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 139 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 81
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 80 cgctaaatagatcaccgtcttggtctct 53
>gb|CB684396.1|CB684396 OSJNEf13N18.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf13N18 3', mRNA sequence
Length = 826
Score = 563 bits (284), Expect = e-158
Identities = 491/560 (87%)
Strand = Plus / Minus
Query: 569 cagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaa 628
||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 826 cagatactccgcggcgttgcttactgtcattctcatagagttcttcatcgagatttgaaa 767
Query: 629 cctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactttggttta 688
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 766 cctcagaatttattgatagatcggcgtactaatgcactgaagcttgcagactttggttta 707
Query: 689 gccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtac 748
|||||||||||||||||||||||||| || |||||||| ||||| || || || |||||
Sbjct: 706 gccagggcatttggaattcctgtccgcacgtttactcacgaggttgtaaccttgtggtat 647
Query: 749 agagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtct 808
||||||||||| || || |||||| | ||||||||||| |||||||||||| |||||||
Sbjct: 646 agagctccagagatccttcttggatcaaggcagtattctacaccagttgatatgtggtca 587
Query: 809 gtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgag 868
|| || ||||||||||| |||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 586 gttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgattctgag 527
Query: 869 atcgacgaactttttaagatattcaggatactaggtacaccgaatgagcagagttggcca 928
|| || ||| | ||||||||||||||| ||||||| || || ||||| || |||||||||
Sbjct: 526 attgatgaattatttaagatattcagggtactaggaactccaaatgaacaaagttggcca 467
Query: 929 ggagtcagttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctg 988
||||| || | || ||||||| |||| | |||||||||| ||||||||| ||||| ||
Sbjct: 466 ggagttagctcattacctgactacaagtctgctttccccaagtggcaagcacaggatctt 407
Query: 989 gcaacagtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgcttcga 1048
||||| | ||||| | ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 406 gcaactattgtccctactcttgaccctgctggtttggaccttctctctaaaatgcttcgg 347
Query: 1049 tacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgagtacttcaaggac 1108
|||||||||| |||||| |||||||| || || || ||||||||||| ||||||||||||
Sbjct: 346 tacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaatacttcaaggac 287
Query: 1109 cttgaagtggtacagtgacc 1128
||||| ||||||| |||||
Sbjct: 286 cttgagatggtacaatgacc 267
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 180 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 122
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 121 cgctaaatagatcaccgtcttggtctct 94
>gb|D24699.1|D24699 RICR2396A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2396_1A, mRNA sequence
Length = 396
Score = 454 bits (229), Expect = e-125
Identities = 356/396 (89%), Gaps = 2/396 (0%)
Strand = Plus / Plus
Query: 254 gagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaag 313
||||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 1 gagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcgggacaag 60
Query: 314 gccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtc 373
| ||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 61 gtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggcgtc 120
Query: 374 ccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtc 433
| |||||||| |||||||||||||| ||||||||||||||| | |||||||||||||||
Sbjct: 121 cnctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaacatcgtc 180
Query: 434 agattacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggat 493
|| ||||| |||||| ||||||| |||||||||||||| |||||||| ||||| ||||||
Sbjct: 181 aggttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggat 240
Query: 494 ctggacctcaagaagttcatggactcctgcccggag-tttgctaagaatcccactttgat 552
|||||||| ||||||||||||||||| || || ||| ||||| || || |||||||| ||
Sbjct: 241 ctggacctaaagaagttcatggactcttgtccagagttttgcgaaaaaccccactttaat 300
Query: 553 caagtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttct 612
|||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||
Sbjct: 301 taagtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttct 360
Query: 613 tcaccgaga-tttgaaacctcagaacttattgatag 647
||| ||||| ||||||||||||||| ||||||||||
Sbjct: 361 tcatcgagattttgaaacctcagaatttattgatag 396
>gb|AU097391.1|AU097391 AU097391 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S4593, mRNA sequence
Length = 708
Score = 426 bits (215), Expect = e-116
Identities = 412/475 (86%), Gaps = 2/475 (0%)
Strand = Plus / Plus
Query: 656 actaatgcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgt 715
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 actaatgcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgc 61
Query: 716 acatttactcatgaggtagtgacattatggtacagagctcc-agaaattctgcttggagc 774
|| |||||||| ||||| || || || ||||| |||||||| ||| || || |||||| |
Sbjct: 62 acgtttactcacgaggttgtaaccttgtggtatagagctcccagagatccttcttggatc 121
Query: 775 gaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggt 834
||||||||||| |||||||||||| ||||||| || || ||||||||||| ||||||||
Sbjct: 122 aaggcagtattctacaccagttgatatgtggtcagttggttgtatctttgcagaaatggt 181
Query: 835 gaacca-aaagccactattccctggcgattctgagatcgacgaactttttaagatattca 893
|||||| ||| ||||| |||||||| ||||||||||| || ||| | |||||||||||||
Sbjct: 182 gaaccagaaaaccactgttccctggtgattctgagattgatgaattatttaagatattca 241
Query: 894 ggatactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttca 953
|| ||||||| || || ||||| || |||||||||||||| || | || ||||||| ||
Sbjct: 242 gggtactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactaca 301
Query: 954 agacagctttccccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgacc 1013
|| | |||||||||| ||||||||| ||||| || ||||| | ||||| | ||||||||
Sbjct: 302 agtctgctttccccaagtggcaagcacaggatcttgcaactattgtccctactcttgacc 361
Query: 1014 ctgctgggttggaccttctctctaaaatgcttcgatacgagccaagcaaaagaatcacag 1073
||||||| |||||||||||||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 362 ctgctggtttggaccttctctctaaaatgcttcggtacgagccaaacaaaaggatcacag 421
Query: 1074 cgaggcaagcacttgagcatgagtacttcaaggaccttgaagtggtacagtgacc 1128
| || || || ||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 422 ctagacaggctcttgagcatgaatacttcaaggaccttgagatggtacaatgacc 476
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 563 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 621
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 622 cgctaaatagatcaccgtcttggtctct 649
>dbj|AK065932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045E13, full
insert sequence
Length = 1566
Score = 414 bits (209), Expect = e-113
Identities = 392/453 (86%)
Strand = Plus / Plus
Query: 676 agactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagt 735
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 937 agactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggttgt 996
Query: 736 gacattatggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagt 795
|| || ||||| ||||||||||| || || |||||| | ||||||||||| ||||||||
Sbjct: 997 aaccttgtggtatagagctccagagatccttcttggatcaaggcagtattctacaccagt 1056
Query: 796 tgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccc 855
|||| ||||||| || || ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 1057 tgatatgtggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccc 1116
Query: 856 tggcgattctgagatcgacgaactttttaagatattcaggatactaggtacaccgaatga 915
||| ||||||||||| || ||| | ||||||||||||||| ||||||| || || |||||
Sbjct: 1117 tggtgattctgagattgatgaattatttaagatattcagggtactaggaactccaaatga 1176
Query: 916 gcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccaggtggca 975
|| |||||||||||||| || | || ||||||| |||| | |||||||||| ||||||
Sbjct: 1177 acaaagttggccaggagttagctcattacctgactacaagtctgctttccccaagtggca 1236
Query: 976 agctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggaccttctctc 1035
|| |||| || ||||| | ||||| | ||||||||||||||| ||||||||||||||
Sbjct: 1237 ggcacaggctcttgcaactattgtccctactcttgaccctgctggtttggaccttctctc 1296
Query: 1036 taaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatga 1095
|||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 1297 taaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatga 1356
Query: 1096 gtacttcaaggaccttgaagtggtacagtgacc 1128
|||||||||||||||||| ||||||| |||||
Sbjct: 1357 gtacttcaaggaccttgagatggtacaatgacc 1389
Score = 337 bits (170), Expect = 9e-090
Identities = 274/308 (88%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||| ||| ||||||| || ||||||||||||||||| |||||||||
Sbjct: 627 atggagcagtacgaggagg---agaagattggagagggcacgtacggggtagtgtacaag 683
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 684 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 743
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 744 gatgagggtgtcccctccaccgccatccgcgagatctcgctcctcaaggagatgcatcac 803
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
||||||||||||| ||||| |||||| ||||||| |||||||||||| ||||||||
Sbjct: 804 cgcaacatcgtcaggttacacgatgttatccacagtgagaagcgcataggtcttgtcttt 863
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 864 gagtatctggatctggacctgaagaagttcatggactcttgtccagagtttgcaaaaaac 923
Query: 542 cccacttt 549
||||||||
Sbjct: 924 cccacttt 931
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 1476 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 1520
>dbj|AK073961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074A14, full
insert sequence
Length = 1212
Score = 406 bits (205), Expect = e-110
Identities = 391/453 (86%)
Strand = Plus / Plus
Query: 676 agactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagt 735
||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||
Sbjct: 543 agactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggttgt 602
Query: 736 gacattatggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagt 795
|| || ||||| ||||||||||| || || |||||| | ||||||||||| ||||||||
Sbjct: 603 aaccttgtggtatagagctccagagatccttcttggatcaaggcagtattctacaccagt 662
Query: 796 tgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccc 855
|||| ||||||| || || ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 663 tgatatgtggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccc 722
Query: 856 tggcgattctgagatcgacgaactttttaagatattcaggatactaggtacaccgaatga 915
||| ||||||||||| || ||| | ||||||||||||||| ||||||| || || |||||
Sbjct: 723 tggtgattctgagattgatgaattatttaagatattcagggtactaggaactccaaatga 782
Query: 916 gcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccaggtggca 975
|| |||||||||||||| || | || ||||||| |||| | |||||||||| ||||||
Sbjct: 783 acaaagttggccaggagttagctcattacctgactacaagtctgctttccccaagtggca 842
Query: 976 agctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggaccttctctc 1035
||| ||||| || ||||| | ||||| | ||||||||||||||| ||||||||||||||
Sbjct: 843 agcacaggatcttgcaactattgtccctactcttgaccctgctggtttggaccttctctc 902
Query: 1036 taaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatga 1095
|||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 903 taaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatga 962
Query: 1096 gtacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 963 atacttcaaggaccttgagatggtacaatgacc 995
Score = 396 bits (200), Expect = e-107
Identities = 281/308 (91%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 230 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 289
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 290 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 349
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||||||||| |||||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 350 gatgagggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcac 409
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
|||||||||||||| ||||| |||||| ||||||| |||||||||||||| ||||||||
Sbjct: 410 ggcaacatcgtcaggttacacgatgttatccacagtgagaagcgcatatatcttgtcttt 469
Query: 482 gagtacctggatctggacctcaagaagttcatggactcctgcccggagtttgctaagaat 541
||||| |||||||||||||| ||||||||||||||||| || || |||||||| || ||
Sbjct: 470 gagtatctggatctggacctaaagaagttcatggactcttgtccagagtttgcgaaaaac 529
Query: 542 cccacttt 549
||||||||
Sbjct: 530 cccacttt 537
Score = 79.8 bits (40), Expect = 4e-012
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 1082 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 1140
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| ||| ||||||||||
Sbjct: 1141 cgctaaatagatcaccatcttggtctct 1168
>gb|CV725111.1|CV725111 14Salt--02-A09.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-A09, mRNA sequence
Length = 489
Score = 357 bits (180), Expect = 1e-095
Identities = 240/260 (92%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 230 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 289
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 290 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 349
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||||||||| |||||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 350 gatgagggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcac 409
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
|||||||||||||| ||||| |||||| ||||||| |||||||||||||| ||||||||
Sbjct: 410 ggcaacatcgtcaggttacacgatgttatccacagtgagaagcgcatatatcttgtcttt 469
Query: 482 gagtacctggatctggacct 501
||||| ||||||||||||||
Sbjct: 470 gagtatctggatctggacct 489
>gb|CF306845.1|CF306845 HDA1--05-A04.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--05-A04, mRNA sequence
Length = 632
Score = 333 bits (168), Expect = 1e-088
Identities = 258/288 (89%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 7 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 66
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 67 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 126
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcagattaca 441
|||||||||||||||||| ||||||||||||||| | ||| ||||||||||||| |||||
Sbjct: 127 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcaggttaca 186
Query: 442 tgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctggacct 501
|||||| ||||||| |||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 187 cgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctggacct 246
Query: 502 caagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 247 gaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 294
Score = 278 bits (140), Expect = 8e-072
Identities = 260/300 (86%)
Strand = Plus / Plus
Query: 676 agactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagt 735
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 300 agactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggttgt 359
Query: 736 gacattatggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagt 795
|| || ||||| ||||||||||| || || |||||| | ||||||||||| ||||||||
Sbjct: 360 aaccttgtggtatagagctccagagatccttcttggatcaaggcagtattctacaccagt 419
Query: 796 tgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccc 855
|||| ||||||| || || ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 420 tgatatgtggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccc 479
Query: 856 tggcgattctgagatcgacgaactttttaagatattcaggatactaggtacaccgaatga 915
||| ||||||||||| || ||| | ||||||||||||||| ||||||| || || |||||
Sbjct: 480 tggtgattctgagattgatgaattatttaagatattcagggtactaggaactccaaatga 539
Query: 916 gcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccaggtggca 975
|| |||||||||||||| || | || ||||||| |||| | |||||||||| ||||||
Sbjct: 540 acaaagttggccaggagttagctcattacctgactacaagtctgctttccccaagtggca 599
>gb|CB663305.1|CB663305 OSJNEd08B15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08B15 3', mRNA sequence
Length = 881
Score = 321 bits (162), Expect = 6e-085
Identities = 330/386 (85%)
Strand = Plus / Minus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 539 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 480
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 479 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 420
Query: 863 tctgagatcgacgaactttttaagatattcaggatactaggtacaccgaatgagcagagt 922
|||||||| || ||| | ||||||||||||||| ||||||| || || ||||| || |||
Sbjct: 419 tctgagattgatgaattatttaagatattcagggtactaggaactccaaatgaacaaagt 360
Query: 923 tggccaggagtcagttgtttgcctgacttcaagacagctttccccaggtggcaagctcag 982
||||||||||| || | || ||||||| |||| | |||||||||| |||||| || |||
Sbjct: 359 tggccaggagttagctcattacctgactacaagtctgctttccccaagtggcaggcacag 300
Query: 983 gacctggcaacagtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatg 1042
| || ||||| | ||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 299 gctcttgcaactattgtccctactcttgaccctgctggtttggaccttctctctaaaatg 240
Query: 1043 cttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgagtacttc 1102
||||| |||||||||| |||||| |||||||| || || || ||||||||||||||||||
Sbjct: 239 cttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgagtacttc 180
Query: 1103 aaggaccttgaagtggtacagtgacc 1128
||||||||||| ||||||| |||||
Sbjct: 179 aaggaccttgagatggtacaatgacc 154
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Minus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 734 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 675
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 674 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 622
Score = 101 bits (51), Expect = 1e-018
Identities = 54/55 (98%)
Strand = Plus / Minus
Query: 676 agactttggtttagccagggcatttggaattcctgtccgtacatttactcatgag 730
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 616 agactttggtttagccagggcatttggaattcctgtccgcacatttactcatgag 562
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 67 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 23
>gb|CF327808.1|CF327808 NACL--02-H04.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--02-H04, mRNA sequence
Length = 486
Score = 317 bits (160), Expect = 9e-084
Identities = 249/278 (89%), Gaps = 3/278 (1%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||| ||| ||||||| || ||||||||||||||||| |||||||||
Sbjct: 206 atggagcagtacgaggagg---agaagattggagagggcacgtacggggtagtgtacaag 262
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 263 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 322
Query: 362 gacgagggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccac 421
|| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 323 gatgagggtgtcccctccaccgccatccgcgagatctcgctcctcaaggagatgcatcac 382
Query: 422 ggcaacatcgtcagattacatgatgttgtccacagcgagaagcgcatataccttgtcttc 481
||||||||| ||| ||||| |||||| ||||||| |||||||||||| ||||||||
Sbjct: 383 cgcaacatcggcaggttacacgatgttatccacagtgagaagcgcataggtcttgtcttt 442
Query: 482 gagtacctggatctggacctcaagaagttcatggactc 519
||||| |||||||||||||| |||||||||||||||||
Sbjct: 443 gagtatctggatctggacctgaagaagttcatggactc 480
>gb|CF306843.1|CF306843 HDA1--05-A02.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--05-A02, mRNA sequence
Length = 245
Score = 283 bits (143), Expect = 1e-073
Identities = 215/239 (89%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 7 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 66
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 67 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 126
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcagattaca 441
||||||||||||||||||| |||||||||||||| | ||| ||||||||||||| |||||
Sbjct: 127 cgccatccgcgagatctctttcctcaaggagatgcatcaccgcaacatcgtcaggttaca 186
Query: 442 tgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctggacc 500
|||||| ||||||| ||||| |||||| |||||||| ||||| |||||||||||||
Sbjct: 187 cgatgttatccacagtgagaaccgcataggtcttgtctttgagtatctggatctggacc 245
>gb|AACV01005772.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005772, whole
genome shotgun sequence
Length = 50701
Score = 272 bits (137), Expect = 5e-070
Identities = 176/189 (93%)
Strand = Plus / Minus
Query: 247 gcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgct 306
|||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 50225 gcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcg 50166
Query: 307 ggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacga 366
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 50165 ggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatga 50106
Query: 367 gggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaa 426
||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 50105 gggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaa 50046
Query: 427 catcgtcag 435
|||||||||
Sbjct: 50045 catcgtcag 50037
Score = 260 bits (131), Expect = 2e-066
Identities = 167/179 (93%)
Strand = Plus / Minus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 48245 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 48186
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 48185 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagcttg 48126
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 48125 cagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggta 48067
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Minus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 47919 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 47860
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 47859 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 47800
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 47799 tctgagattgatgaattatttaagatattcagg 47767
Score = 121 bits (61), Expect = 1e-024
Identities = 100/113 (88%)
Strand = Plus / Minus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 49760 ttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggatctg 49701
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 49700 gacctaaagaagttcatggactcttgtccagagtttgcgaaaaaccccacttt 49648
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 47345 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaa 47286
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 47285 tacttcaaggaccttgagatggtacaatgacc 47254
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 47167 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 47109
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 47108 cgctaaatagatcaccgtcttggtctct 47081
Score = 54.0 bits (27), Expect = 2e-004
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 47669 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 47610
Query: 957 cagctttccccaggtggcaagctcagg 983
| |||||||||| ||||||||| ||||
Sbjct: 47609 ctgctttccccaagtggcaagcacagg 47583
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 47467 tcttgaccctgctggtttggaccttctctct 47437
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 272 bits (137), Expect = 5e-070
Identities = 176/189 (93%)
Strand = Plus / Plus
Query: 247 gcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgct 306
|||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 977691 gcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcg 977750
Query: 307 ggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacga 366
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 977751 ggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatga 977810
Query: 367 gggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaa 426
||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 977811 gggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaa 977870
Query: 427 catcgtcag 435
|||||||||
Sbjct: 977871 catcgtcag 977879
Score = 268 bits (135), Expect = 7e-069
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 491931 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 491990
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 491991 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatacactgaagcttg 492050
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 492051 cagactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggta 492109
Score = 260 bits (131), Expect = 2e-066
Identities = 167/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 979671 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 979730
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 979731 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagcttg 979790
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 979791 cagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggta 979849
Score = 234 bits (118), Expect = 1e-058
Identities = 160/174 (91%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 490129 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 490188
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 490189 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 490248
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
|||||||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 490249 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcag 490302
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 979997 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 980056
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 980057 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 980116
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 980117 tctgagattgatgaattatttaagatattcagg 980149
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 492258 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 492317
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 492318 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 492377
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 492378 tctgagattgatgaattatttaagatattcagg 492410
Score = 121 bits (61), Expect = 1e-024
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 978156 ttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggatctg 978215
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 978216 gacctaaagaagttcatggactcttgtccagagtttgcgaaaaaccccacttt 978268
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 490552 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 490611
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 490612 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 490664
Score = 103 bits (52), Expect = 2e-019
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || ||||||||||||
Sbjct: 492837 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgag 492896
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 492897 tacttcaaggaccttgagatggtacaatgacc 492928
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 980571 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaa 980630
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 980631 tacttcaaggaccttgagatggtacaatgacc 980662
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 980749 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 980807
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 980808 cgctaaatagatcaccgtcttggtctct 980835
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 980449 tcttgaccctgctggtttggaccttctctct 980479
Score = 54.0 bits (27), Expect = 2e-004
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 980247 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 980306
Query: 957 cagctttccccaggtggcaagctcagg 983
| |||||||||| ||||||||| ||||
Sbjct: 980307 ctgctttccccaagtggcaagcacagg 980333
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 492710 tcttgaccctgctggtttggaccttctctct 492740
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 493015 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 493059
Score = 46.1 bits (23), Expect = 0.050
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 492508 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 492567
Query: 957 cagctttccccaggtggca 975
| |||||||||| ||||||
Sbjct: 492568 ctgctttccccaagtggca 492586
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13,
complete sequence
Length = 148011
Score = 272 bits (137), Expect = 5e-070
Identities = 176/189 (93%)
Strand = Plus / Plus
Query: 247 gcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgct 306
|||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 132890 gcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcg 132949
Query: 307 ggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacga 366
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 132950 ggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatga 133009
Query: 367 gggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaa 426
||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 133010 gggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaa 133069
Query: 427 catcgtcag 435
|||||||||
Sbjct: 133070 catcgtcag 133078
Score = 260 bits (131), Expect = 2e-066
Identities = 167/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 134870 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 134929
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 134930 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagcttg 134989
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 134990 cagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggta 135048
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 135196 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 135255
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 135256 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 135315
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 135316 tctgagattgatgaattatttaagatattcagg 135348
Score = 121 bits (61), Expect = 1e-024
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 133355 ttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggatctg 133414
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 133415 gacctaaagaagttcatggactcttgtccagagtttgcgaaaaaccccacttt 133467
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 135770 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaa 135829
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 135830 tacttcaaggaccttgagatggtacaatgacc 135861
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 135948 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 136006
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 136007 cgctaaatagatcaccgtcttggtctct 136034
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 135648 tcttgaccctgctggtttggaccttctctct 135678
Score = 54.0 bits (27), Expect = 2e-004
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 135446 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 135505
Query: 957 cagctttccccaggtggcaagctcagg 983
| |||||||||| ||||||||| ||||
Sbjct: 135506 ctgctttccccaagtggcaagcacagg 135532
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 272 bits (137), Expect = 5e-070
Identities = 176/189 (93%)
Strand = Plus / Plus
Query: 247 gcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgct 306
|||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 975661 gcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcg 975720
Query: 307 ggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacga 366
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 975721 ggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatga 975780
Query: 367 gggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaa 426
||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 975781 gggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaa 975840
Query: 427 catcgtcag 435
|||||||||
Sbjct: 975841 catcgtcag 975849
Score = 268 bits (135), Expect = 7e-069
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 509547 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 509606
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 509607 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatacactgaagcttg 509666
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 509667 cagactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggta 509725
Score = 260 bits (131), Expect = 2e-066
Identities = 167/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 977641 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 977700
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 977701 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagcttg 977760
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 977761 cagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggta 977819
Score = 234 bits (118), Expect = 1e-058
Identities = 160/174 (91%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 507745 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 507804
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 507805 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 507864
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
|||||||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 507865 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcag 507918
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 977967 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 978026
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 978027 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 978086
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 978087 tctgagattgatgaattatttaagatattcagg 978119
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 509874 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 509933
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 509934 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 509993
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 509994 tctgagattgatgaattatttaagatattcagg 510026
Score = 121 bits (61), Expect = 1e-024
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 976126 ttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggatctg 976185
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 976186 gacctaaagaagttcatggactcttgtccagagtttgcgaaaaaccccacttt 976238
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 508168 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 508227
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 508228 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 508280
Score = 103 bits (52), Expect = 2e-019
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || ||||||||||||
Sbjct: 510453 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgag 510512
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 510513 tacttcaaggaccttgagatggtacaatgacc 510544
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 978541 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaa 978600
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 978601 tacttcaaggaccttgagatggtacaatgacc 978632
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 978719 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 978777
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 978778 cgctaaatagatcaccgtcttggtctct 978805
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 978419 tcttgaccctgctggtttggaccttctctct 978449
Score = 54.0 bits (27), Expect = 2e-004
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 978217 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 978276
Query: 957 cagctttccccaggtggcaagctcagg 983
| |||||||||| ||||||||| ||||
Sbjct: 978277 ctgctttccccaagtggcaagcacagg 978303
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 510326 tcttgaccctgctggtttggaccttctctct 510356
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 510631 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 510675
Score = 46.1 bits (23), Expect = 0.050
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 510124 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 510183
Query: 957 cagctttccccaggtggca 975
| |||||||||| ||||||
Sbjct: 510184 ctgctttccccaagtggca 510202
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 272 bits (137), Expect = 5e-070
Identities = 176/189 (93%)
Strand = Plus / Plus
Query: 247 gcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgct 306
|||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 1168023 gcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcg 1168082
Query: 307 ggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacga 366
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 1168083 ggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatga 1168142
Query: 367 gggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaa 426
||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 1168143 gggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaa 1168202
Query: 427 catcgtcag 435
|||||||||
Sbjct: 1168203 catcgtcag 1168211
Score = 268 bits (135), Expect = 7e-069
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 701909 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 701968
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 701969 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatacactgaagcttg 702028
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 702029 cagactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggta 702087
Score = 260 bits (131), Expect = 2e-066
Identities = 167/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 1170003 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 1170062
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 1170063 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagcttg 1170122
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1170123 cagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggta 1170181
Score = 234 bits (118), Expect = 1e-058
Identities = 160/174 (91%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 700107 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 700166
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 700167 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 700226
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
|||||||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 700227 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcag 700280
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 1170329 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 1170388
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 1170389 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 1170448
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 1170449 tctgagattgatgaattatttaagatattcagg 1170481
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 702236 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 702295
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 702296 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 702355
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 702356 tctgagattgatgaattatttaagatattcagg 702388
Score = 121 bits (61), Expect = 1e-024
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 1168488 ttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggatctg 1168547
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 1168548 gacctaaagaagttcatggactcttgtccagagtttgcgaaaaaccccacttt 1168600
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 700530 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 700589
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 700590 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 700642
Score = 103 bits (52), Expect = 2e-019
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || ||||||||||||
Sbjct: 702815 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgag 702874
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 702875 tacttcaaggaccttgagatggtacaatgacc 702906
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 1170903 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaa 1170962
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 1170963 tacttcaaggaccttgagatggtacaatgacc 1170994
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 1171081 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 1171139
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 1171140 cgctaaatagatcaccgtcttggtctct 1171167
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 1170781 tcttgaccctgctggtttggaccttctctct 1170811
Score = 54.0 bits (27), Expect = 2e-004
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 1170579 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 1170638
Query: 957 cagctttccccaggtggcaagctcagg 983
| |||||||||| ||||||||| ||||
Sbjct: 1170639 ctgctttccccaagtggcaagcacagg 1170665
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 702688 tcttgaccctgctggtttggaccttctctct 702718
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 702993 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 703037
Score = 46.1 bits (23), Expect = 0.050
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 702486 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 702545
Query: 957 cagctttccccaggtggca 975
| |||||||||| ||||||
Sbjct: 702546 ctgctttccccaagtggca 702564
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
complete sequence
Length = 36192742
Score = 272 bits (137), Expect = 5e-070
Identities = 176/189 (93%)
Strand = Plus / Plus
Query: 247 gcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgct 306
|||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 977691 gcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcg 977750
Query: 307 ggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacga 366
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 977751 ggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatga 977810
Query: 367 gggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaa 426
||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 977811 gggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaa 977870
Query: 427 catcgtcag 435
|||||||||
Sbjct: 977871 catcgtcag 977879
Score = 268 bits (135), Expect = 7e-069
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 491931 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 491990
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 491991 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatacactgaagcttg 492050
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 492051 cagactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggta 492109
Score = 260 bits (131), Expect = 2e-066
Identities = 167/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 979671 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 979730
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 979731 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagcttg 979790
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 979791 cagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggta 979849
Score = 234 bits (118), Expect = 1e-058
Identities = 160/174 (91%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 490129 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 490188
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 490189 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 490248
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
|||||||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 490249 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcag 490302
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 979997 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 980056
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 980057 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 980116
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 980117 tctgagattgatgaattatttaagatattcagg 980149
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 492258 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 492317
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 492318 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 492377
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 492378 tctgagattgatgaattatttaagatattcagg 492410
Score = 121 bits (61), Expect = 1e-024
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 978156 ttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggatctg 978215
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 978216 gacctaaagaagttcatggactcttgtccagagtttgcgaaaaaccccacttt 978268
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 490552 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 490611
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 490612 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 490664
Score = 103 bits (52), Expect = 2e-019
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || ||||||||||||
Sbjct: 492837 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgag 492896
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 492897 tacttcaaggaccttgagatggtacaatgacc 492928
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 980571 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaa 980630
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 980631 tacttcaaggaccttgagatggtacaatgacc 980662
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 980749 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 980807
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 980808 cgctaaatagatcaccgtcttggtctct 980835
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 980449 tcttgaccctgctggtttggaccttctctct 980479
Score = 54.0 bits (27), Expect = 2e-004
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 980247 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 980306
Query: 957 cagctttccccaggtggcaagctcagg 983
| |||||||||| ||||||||| ||||
Sbjct: 980307 ctgctttccccaagtggcaagcacagg 980333
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 492710 tcttgaccctgctggtttggaccttctctct 492740
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 493015 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 493059
Score = 46.1 bits (23), Expect = 0.050
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 492508 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 492567
Query: 957 cagctttccccaggtggca 975
| |||||||||| ||||||
Sbjct: 492568 ctgctttccccaagtggca 492586
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 272 bits (137), Expect = 5e-070
Identities = 176/189 (93%)
Strand = Plus / Plus
Query: 247 gcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaaggcgct 306
|||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 977693 gcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagggcgcg 977752
Query: 307 ggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacga 366
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 977753 ggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggaggatga 977812
Query: 367 gggcgtcccgtccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaa 426
||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 977813 gggcgtcccctccaccgcaatccgcgagatctcgctcctcaaggagatgcatcacggcaa 977872
Query: 427 catcgtcag 435
|||||||||
Sbjct: 977873 catcgtcag 977881
Score = 268 bits (135), Expect = 7e-069
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 491933 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 491992
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 491993 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatacactgaagcttg 492052
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 492053 cagactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggta 492111
Score = 260 bits (131), Expect = 2e-066
Identities = 167/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 979673 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 979732
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 979733 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatgcactgaagcttg 979792
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 979793 cagactttggtttagccagggcatttggaattcctgtccgcacgtttactcacgaggta 979851
Score = 234 bits (118), Expect = 1e-058
Identities = 160/174 (91%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 490131 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 490190
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 490191 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 490250
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
|||||||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 490251 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcag 490304
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 979999 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 980058
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 980059 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 980118
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 980119 tctgagattgatgaattatttaagatattcagg 980151
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 492260 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 492319
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 492320 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 492379
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 492380 tctgagattgatgaattatttaagatattcagg 492412
Score = 121 bits (61), Expect = 1e-024
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 978158 ttacacgatgttatccacagtgagaagcgcatatatcttgtctttgagtatctggatctg 978217
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 978218 gacctaaagaagttcatggactcttgtccagagtttgcgaaaaaccccacttt 978270
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 490554 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 490613
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 490614 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 490666
Score = 103 bits (52), Expect = 2e-019
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || ||||||||||||
Sbjct: 492839 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgag 492898
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 492899 tacttcaaggaccttgagatggtacaatgacc 492930
Score = 95.6 bits (48), Expect = 6e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || |||||||||||
Sbjct: 980573 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgaa 980632
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 980633 tacttcaaggaccttgagatggtacaatgacc 980664
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 980751 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 980809
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 980810 cgctaaatagatcaccgtcttggtctct 980837
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 980451 tcttgaccctgctggtttggaccttctctct 980481
Score = 54.0 bits (27), Expect = 2e-004
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 980249 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 980308
Query: 957 cagctttccccaggtggcaagctcagg 983
| |||||||||| ||||||||| ||||
Sbjct: 980309 ctgctttccccaagtggcaagcacagg 980335
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 492712 tcttgaccctgctggtttggaccttctctct 492742
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 493017 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 493061
Score = 46.1 bits (23), Expect = 0.050
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 492510 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 492569
Query: 957 cagctttccccaggtggca 975
| |||||||||| ||||||
Sbjct: 492570 ctgctttccccaagtggca 492588
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03,
complete sequence
Length = 116214
Score = 268 bits (135), Expect = 7e-069
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 90393 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 90452
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 90453 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatacactgaagcttg 90512
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 90513 cagactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggta 90571
Score = 234 bits (118), Expect = 1e-058
Identities = 160/174 (91%)
Strand = Plus / Plus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 88591 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 88650
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 88651 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 88710
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
|||||||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 88711 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcag 88764
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 90720 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 90779
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 90780 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 90839
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 90840 tctgagattgatgaattatttaagatattcagg 90872
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 89014 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 89073
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 89074 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 89126
Score = 103 bits (52), Expect = 2e-019
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || ||||||||||||
Sbjct: 91299 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgag 91358
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 91359 tacttcaaggaccttgagatggtacaatgacc 91390
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 91172 tcttgaccctgctggtttggaccttctctct 91202
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 91477 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 91521
Score = 46.1 bits (23), Expect = 0.050
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 90970 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 91029
Query: 957 cagctttccccaggtggca 975
| |||||||||| ||||||
Sbjct: 91030 ctgctttccccaagtggca 91048
>gb|AACV01005750.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005750, whole
genome shotgun sequence
Length = 30262
Score = 268 bits (135), Expect = 7e-069
Identities = 168/179 (93%)
Strand = Plus / Minus
Query: 555 agtcatacctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttc 614
||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 8823 agtcatatctctatcagatactccgcggcgttgcttactgtcattctcatagagttcttc 8764
Query: 615 accgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttg 674
| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 8763 atcgagatttgaaacctcagaatttattgatagatcggcgtactaatacactgaagcttg 8704
Query: 675 cagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8703 cagactttggtttagccagggcatttggaattcctgtccgcacatttactcatgaggta 8645
Score = 234 bits (118), Expect = 1e-058
Identities = 160/174 (91%)
Strand = Plus / Minus
Query: 262 ggagaagatcggggagggcacgtacggggtggtgtacaaggcgctggacaaggccaccaa 321
||||||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 10625 ggagaagattggagagggcacgtacggggtagtgtacaaggcgcgggacaaggtcaccaa 10566
Query: 322 cgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccgtccac 381
||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 10565 cgagacgatcgcgctcaagaagatccggcttgagcaggaggatgagggtgtcccctccac 10506
Query: 382 cgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
|||||||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 10505 cgccatccgcgagatctcgctcctcaaggagatgcatcaccgcaacatcgtcag 10452
Score = 145 bits (73), Expect = 7e-032
Identities = 133/153 (86%)
Strand = Plus / Minus
Query: 743 tggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtg 802
||||| ||||||||||| || || |||||| | ||||||||||| |||||||||||| ||
Sbjct: 8496 tggtatagagctccagagatccttcttggatcaaggcagtattctacaccagttgatatg 8437
Query: 803 tggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcgat 862
||||| || || ||||||||||| |||||||||||||| || ||||| |||||||| |||
Sbjct: 8436 tggtcagttggttgtatctttgcagaaatggtgaaccagaaaccactgttccctggtgat 8377
Query: 863 tctgagatcgacgaactttttaagatattcagg 895
|||||||| || ||| | |||||||||||||||
Sbjct: 8376 tctgagattgatgaattatttaagatattcagg 8344
Score = 105 bits (53), Expect = 6e-020
Identities = 98/113 (86%)
Strand = Plus / Minus
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
||||| |||||| ||||||| |||||||||||| |||||||| ||||| |||||||||
Sbjct: 10202 ttacacgatgttatccacagtgagaagcgcataggtcttgtctttgagtatctggatctg 10143
Query: 497 gacctcaagaagttcatggactcctgcccggagtttgctaagaatcccacttt 549
||||| ||||||||||||||||| || || |||||||| || || ||||||||
Sbjct: 10142 gacctgaagaagttcatggactcttgtccagagtttgcaaaaaaccccacttt 10090
Score = 103 bits (52), Expect = 2e-019
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 1037 aaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgag 1096
||||||||||| |||||||||| |||||| |||||||| || || || ||||||||||||
Sbjct: 7917 aaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgag 7858
Query: 1097 tacttcaaggaccttgaagtggtacagtgacc 1128
||||||||||||||||| ||||||| |||||
Sbjct: 7857 tacttcaaggaccttgagatggtacaatgacc 7826
Score = 54.0 bits (27), Expect = 2e-004
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1006 tcttgaccctgctgggttggaccttctctct 1036
||||||||||||||| |||||||||||||||
Sbjct: 8044 tcttgaccctgctggtttggaccttctctct 8014
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 7739 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 7695
Score = 46.1 bits (23), Expect = 0.050
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
||||||| || || ||||| || |||||||||||||| || | || ||||||| ||||
Sbjct: 8246 tactaggaactccaaatgaacaaagttggccaggagttagctcattacctgactacaagt 8187
Query: 957 cagctttccccaggtggca 975
| |||||||||| ||||||
Sbjct: 8186 ctgctttccccaagtggca 8168
>dbj|AK064363.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B12, full
insert sequence
Length = 1371
Score = 232 bits (117), Expect = 4e-058
Identities = 279/333 (83%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 571 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 630
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 631 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 690
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacatt 741
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 691 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggtggtgacatt 750
Query: 742 atggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgt 801
||||| ||||| || |||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct: 751 gtggtatagagcacctgaaattcttcttggtgcaaggcattattccacccctgttgacat 810
Query: 802 gtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcga 861
|||||| || || || || ||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct: 811 gtggtcagttggttgcatttttgctgaaatggtgaatcagaagccactatttcctggaga 870
Query: 862 ttctgagatcgacgaactttttaagatattcag 894
||||||||| || ||||| |||||||| |||||
Sbjct: 871 ttctgagattgatgaactctttaagattttcag 903
Score = 206 bits (104), Expect = 2e-050
Identities = 185/212 (87%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 329 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 388
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcaga 436
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 389 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcagg 448
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
| || || || || |||| ||||| |||||||||| |||||||||||||| || ||
Sbjct: 449 ctgcaggacgtcgtgcacaaggagaaatgcatatacctcgtcttcgagtacctcgacctt 508
Query: 497 gacctcaagaagttcatggactcctgcccgga 528
|||||||||||| ||||||||| | ||||||
Sbjct: 509 gacctcaagaagcacatggactcatccccgga 540
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 256 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 314
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 1097 gagcacgagtacttcaaggacctggaagtgg 1127
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1028 cttctctctaaaatgcttcgatacgagccaagcaaaagaatca 1070
||||||||||||||||| || | || ||||||||||||||||
Sbjct: 1037 cttctctctaaaatgctccgtttagatccaagcaaaagaatca 1079
>dbj|AK101344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034K16, full
insert sequence
Length = 1195
Score = 232 bits (117), Expect = 4e-058
Identities = 279/333 (83%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 425 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 484
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 485 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 544
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacatt 741
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 545 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggtggtgacatt 604
Query: 742 atggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgt 801
||||| ||||| || |||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct: 605 gtggtatagagcacctgaaattcttcttggtgcaaggcattattccacccctgttgacat 664
Query: 802 gtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcga 861
|||||| || || || || ||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct: 665 gtggtcagttggttgcatttttgctgaaatggtgaatcagaagccactatttcctggaga 724
Query: 862 ttctgagatcgacgaactttttaagatattcag 894
||||||||| || ||||| |||||||| |||||
Sbjct: 725 ttctgagattgatgaactctttaagattttcag 757
Score = 206 bits (104), Expect = 2e-050
Identities = 185/212 (87%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 183 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 242
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcaga 436
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 243 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcagg 302
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
| || || || || |||| ||||| |||||||||| |||||||||||||| || ||
Sbjct: 303 ctgcaggacgtcgtgcacaaggagaaatgcatatacctcgtcttcgagtacctcgacctt 362
Query: 497 gacctcaagaagttcatggactcctgcccgga 528
|||||||||||| ||||||||| | ||||||
Sbjct: 363 gacctcaagaagcacatggactcatccccgga 394
Score = 113 bits (57), Expect = 3e-022
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 108 atggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaag 167
Query: 302 g 302
|
Sbjct: 168 g 168
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 951 gagcacgagtacttcaaggacctggaagtgg 981
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1028 cttctctctaaaatgcttcgatacgagccaagcaaaagaatca 1070
||||||||||||||||| || | || ||||||||||||||||
Sbjct: 891 cttctctctaaaatgctccgtttagatccaagcaaaagaatca 933
>ref|XM_463932.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 879
Score = 232 bits (117), Expect = 4e-058
Identities = 279/333 (83%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 318 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 377
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 378 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 437
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacatt 741
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 438 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggtggtgacatt 497
Query: 742 atggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgt 801
||||| ||||| || |||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct: 498 gtggtatagagcacctgaaattcttcttggtgcaaggcattattccacccctgttgacat 557
Query: 802 gtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcga 861
|||||| || || || || ||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct: 558 gtggtcagttggttgcatttttgctgaaatggtgaatcagaagccactatttcctggaga 617
Query: 862 ttctgagatcgacgaactttttaagatattcag 894
||||||||| || ||||| |||||||| |||||
Sbjct: 618 ttctgagattgatgaactctttaagattttcag 650
Score = 206 bits (104), Expect = 2e-050
Identities = 185/212 (87%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 76 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 135
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcaga 436
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 136 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcagg 195
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
| || || || || |||| ||||| |||||||||| |||||||||||||| || ||
Sbjct: 196 ctgcaggacgtcgtgcacaaggagaaatgcatatacctcgtcttcgagtacctcgacctt 255
Query: 497 gacctcaagaagttcatggactcctgcccgga 528
|||||||||||| ||||||||| | ||||||
Sbjct: 256 gacctcaagaagcacatggactcatccccgga 287
Score = 113 bits (57), Expect = 3e-022
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 atggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaag 60
Query: 302 g 302
|
Sbjct: 61 g 61
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 844 gagcacgagtacttcaaggacctggaagtgg 874
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1028 cttctctctaaaatgcttcgatacgagccaagcaaaagaatca 1070
||||||||||||||||| || | || ||||||||||||||||
Sbjct: 784 cttctctctaaaatgctccgtttagatccaagcaaaagaatca 826
>ref|XM_463933.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1351
Score = 232 bits (117), Expect = 4e-058
Identities = 279/333 (83%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 571 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 630
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 631 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 690
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacatt 741
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 691 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggtggtgacatt 750
Query: 742 atggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgt 801
||||| ||||| || |||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct: 751 gtggtatagagcacctgaaattcttcttggtgcaaggcattattccacccctgttgacat 810
Query: 802 gtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcga 861
|||||| || || || || ||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct: 811 gtggtcagttggttgcatttttgctgaaatggtgaatcagaagccactatttcctggaga 870
Query: 862 ttctgagatcgacgaactttttaagatattcag 894
||||||||| || ||||| |||||||| |||||
Sbjct: 871 ttctgagattgatgaactctttaagattttcag 903
Score = 206 bits (104), Expect = 2e-050
Identities = 185/212 (87%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 329 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 388
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcaga 436
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 389 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcagg 448
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
| || || || || |||| ||||| |||||||||| |||||||||||||| || ||
Sbjct: 449 ctgcaggacgtcgtgcacaaggagaaatgcatatacctcgtcttcgagtacctcgacctt 508
Query: 497 gacctcaagaagttcatggactcctgcccgga 528
|||||||||||| ||||||||| | ||||||
Sbjct: 509 gacctcaagaagcacatggactcatccccgga 540
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 256 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 314
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 1097 gagcacgagtacttcaaggacctggaagtgg 1127
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1028 cttctctctaaaatgcttcgatacgagccaagcaaaagaatca 1070
||||||||||||||||| || | || ||||||||||||||||
Sbjct: 1037 cttctctctaaaatgctccgtttagatccaagcaaaagaatca 1079
>emb|X60375.1|OSRCDC22 O.sativa Rcdc2-2 gene for p34-cdc2 protein kinase
Length = 1126
Score = 232 bits (117), Expect = 4e-058
Identities = 279/333 (83%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 352 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 411
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 412 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 471
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacatt 741
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 472 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggtggtgacatt 531
Query: 742 atggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgt 801
||||| ||||| || |||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct: 532 gtggtatagagcacctgaaattcttcttggtgcaaggcattattccacccctgttgacat 591
Query: 802 gtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccctggcga 861
|||||| || || || || ||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct: 592 gtggtcagttggttgcatttttgctgaaatggtgaatcagaagccactatttcctggaga 651
Query: 862 ttctgagatcgacgaactttttaagatattcag 894
||||||||| || ||||| |||||||| |||||
Sbjct: 652 ttctgagattgatgaactctttaagattttcag 684
Score = 206 bits (104), Expect = 2e-050
Identities = 185/212 (87%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 110 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 169
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcaga 436
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 170 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcagg 229
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
| || || || || |||| ||||| |||||||||| |||||||||||||| || ||
Sbjct: 230 ctgcaggacgtcgtgcacaaggagaaatgcatatacctcgtcttcgagtacctcgacctt 289
Query: 497 gacctcaagaagttcatggactcctgcccgga 528
|||||||||||| ||||||||| | ||||||
Sbjct: 290 gacctcaagaagcacatggactcatccccgga 321
Score = 113 bits (57), Expect = 3e-022
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 35 atggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaag 94
Query: 302 g 302
|
Sbjct: 95 g 95
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 878 gagcacgagtacttcaaggacctggaagtgg 908
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1028 cttctctctaaaatgcttcgatacgagccaagcaaaagaatca 1070
||||||||||||||||| || | || ||||||||||||||||
Sbjct: 818 cttctctctaaaatgctccgtttagatccaagcaaaagaatca 860
>gb|CF327809.1|CF327809 NACL--02-H04.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--02-H04, mRNA
sequence
Length = 487
Score = 216 bits (109), Expect = 2e-053
Identities = 229/269 (85%)
Strand = Plus / Minus
Query: 860 gattctgagatcgacgaactttttaagatattcaggatactaggtacaccgaatgagcag 919
||||||||||| || ||| | ||||||||||||||| ||||||| || || ||||| ||
Sbjct: 484 gattctgagattgatgaattatttaagatattcagggtactaggaactccaaatgaacaa 425
Query: 920 agttggccaggagtcagttgtttgcctgacttcaagacagctttccccaggtggcaagct 979
|||||||||||||| || | || ||||||| |||| | |||||||||| |||||| ||
Sbjct: 424 agttggccaggagttagctcattacctgactacaagtctgctttccccaagtggcaggca 365
Query: 980 caggacctggcaacagtagtcccaaatcttgaccctgctgggttggaccttctctctaaa 1039
|||| || ||||| | ||||| | ||||||||||||||| ||||||||||||||||||
Sbjct: 364 caggctcttgcaactattgtccctactcttgaccctgctggtttggaccttctctctaaa 305
Query: 1040 atgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgagcatgagtac 1099
|||||||| |||||||||| |||||| |||||||| || || || |||||||||||||||
Sbjct: 304 atgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgagcatgagtac 245
Query: 1100 ttcaaggaccttgaagtggtacagtgacc 1128
|||||||||||||| ||||||| |||||
Sbjct: 244 ttcaaggaccttgagatggtacaatgacc 216
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 1221 gcatttttgtcattcagctgg--atatttcgaatctggtgtgttt 1263
||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 129 gcatttttgtcattcagctggatatatttcaaatcttgtgtgttt 85
>dbj|AK062097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A01, full
insert sequence
Length = 456
Score = 214 bits (108), Expect = 9e-053
Identities = 213/248 (85%)
Strand = Plus / Plus
Query: 881 tttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtcagttgt 940
||||||||||||||| ||||||| || || ||||| || |||||||||||||| || |
Sbjct: 7 tttaagatattcagggtactaggaactccaaatgaacaaagttggccaggagttagctca 66
Query: 941 ttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaacagtagtc 1000
|| ||||||| |||| | |||||||||| ||||||||| ||||| || ||||| | |||
Sbjct: 67 ttacctgactacaagtctgctttccccaagtggcaagcacaggatcttgcaactattgtc 126
Query: 1001 ccaaatcttgaccctgctgggttggaccttctctctaaaatgcttcgatacgagccaagc 1060
|| | ||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
Sbjct: 127 cctactcttgaccctgctggtttggaccttctctctaaaatgcttcggtacgagccaaac 186
Query: 1061 aaaagaatcacagcgaggcaagcacttgagcatgagtacttcaaggaccttgaagtggta 1120
||||| |||||||| || || || ||||||||||| ||||||||||||||||| |||||
Sbjct: 187 aaaaggatcacagctagacaggctcttgagcatgaatacttcaaggaccttgagatggta 246
Query: 1121 cagtgacc 1128
|| |||||
Sbjct: 247 caatgacc 254
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 341 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 399
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 400 cgctaaatagatcaccgtcttggtctct 427
>gb|CF306524.1|CF306524 HDA1--04-B17.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--04-B17, mRNA sequence
Length = 560
Score = 212 bits (107), Expect = 4e-052
Identities = 242/287 (84%)
Strand = Plus / Plus
Query: 608 gttcttcaccgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactg 667
||||| |||||||||||||| || |||||| | ||||||||||||| || || || ||
Sbjct: 13 gttctccaccgagatttgaagccccagaacctgctgatagatcggcgtaccaactcattg 72
Query: 668 aagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttactcat 727
||||| || |||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 73 aagctcgcggactttgggttggccagggcatttggcattcctgtccggacatttactcac 132
Query: 728 gaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattcc 787
||||| |||||||| ||||| ||||| || |||||||| ||||| || ||||| ||||||
Sbjct: 133 gaggtggtgacattgtggtatagagcacctgaaattcttcttggtgcaaggcattattcc 192
Query: 788 acaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagcca 847
|| || ||||| ||||||| || || || || ||||| ||||||||||| || ||||||
Sbjct: 193 acccctgttgacatgtggtcagttggttgcatttttgctgaaatggtgaatcagaagcca 252
Query: 848 ctattccctggcgattctgagatcgacgaactttttaagatattcag 894
||||| ||||| ||||||||||| || ||||| |||||||| |||||
Sbjct: 253 ctatttcctggagattctgagattgatgaactctttaagattttcag 299
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1028 cttctctctaaaatgcttcgatacgagccaagcaaaagaatca 1070
||||||||||||||||| || | || ||||||||||||||||
Sbjct: 433 cttctctctaaaatgctccgtttagatccaagcaaaagaatca 475
>gb|CF316758.1|CF316758 HD--06-D01.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--06-D01, mRNA sequence
Length = 670
Score = 206 bits (104), Expect = 2e-050
Identities = 185/212 (87%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 188 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 247
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcaga 436
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 248 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcagg 307
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
| || || || || |||| ||||| |||||||||| |||||||||||||| || ||
Sbjct: 308 ctgcaggacgtcgtgcacaaggagaaatgcatatacctcgtcttcgagtacctcgacctt 367
Query: 497 gacctcaagaagttcatggactcctgcccgga 528
|||||||||||| ||||||||| | ||||||
Sbjct: 368 gacctcaagaagcacatggactcatccccgga 399
Score = 155 bits (78), Expect = 8e-035
Identities = 199/238 (83%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 430 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 489
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 490 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 549
Query: 682 tggt-ttagccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacat 740
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 550 tggggttggccagggcatttggcattcctgtccggacatttactcacgaggtggtgacat 609
Query: 741 tatggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagttga 798
| ||||| ||||| || |||||||| ||||| || ||||| |||||||| || |||||
Sbjct: 610 tgtggtatagagcacctgaaattcttcttggtgcaaggcattattccacccctgttga 667
Score = 113 bits (57), Expect = 3e-022
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 113 atggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaag 172
Query: 302 g 302
|
Sbjct: 173 g 173
>gb|D40757.1|D40757 RICS2901A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 401
Score = 202 bits (102), Expect = 4e-049
Identities = 177/202 (87%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 122 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 181
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcaga 436
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 182 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcagg 241
Query: 437 ttacatgatgttgtccacagcgagaagcgcatataccttgtcttcgagtacctggatctg 496
| || || || || |||| ||||| |||||||||| |||||||||||||| || ||
Sbjct: 242 ctgcaggacgtcgtgcacaaggagaaatgcatatacctcgtcttcgagtacctcgacctt 301
Query: 497 gacctcaagaagttcatggact 518
|||||||||||| ||||||||
Sbjct: 302 gacctcaagaagcacatggact 323
Score = 113 bits (57), Expect = 3e-022
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 47 atggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaag 106
Query: 302 g 302
|
Sbjct: 107 g 107
>gb|D24771.1|D24771 RICR2531A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2531_1A, mRNA sequence
Length = 340
Score = 196 bits (99), Expect = 2e-047
Identities = 125/134 (93%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 207 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 266
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 267 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttnagcaggag 326
Query: 362 gacgagggcgtccc 375
|| |||||||||||
Sbjct: 327 gatgagggcgtccc 340
>gb|AU162532.1|AU162532 AU162532 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3824, mRNA sequence
Length = 351
Score = 188 bits (95), Expect = 5e-045
Identities = 124/134 (92%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 207 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 266
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 267 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccggcttgagcaggag 326
Query: 362 gacgagggcgtccc 375
|| | ||||||||
Sbjct: 327 gatnaaggcgtccc 340
>gb|C22593.1|C22593 C22593 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R2396_3Z, mRNA sequence
Length = 459
Score = 186 bits (94), Expect = 2e-044
Identities = 187/218 (85%)
Strand = Plus / Plus
Query: 911 aatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccagg 970
||||| || |||||||||||||| || | || ||||||| |||| | |||||||||| |
Sbjct: 7 aatgaacaaagttggccaggagttagctcattacctgactacaagtctgctttccccaag 66
Query: 971 tggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggacctt 1030
|||||||| ||||| || ||||| | ||||| | ||||||||||||||| |||||||||
Sbjct: 67 tggcaagcacaggatcttgcaactattgtccctactcttgaccctgctggtttggacctt 126
Query: 1031 ctctctaaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgag 1090
||||||||||||||||| |||||||||| |||||| |||||||| || || || ||||||
Sbjct: 127 ctctctaaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgag 186
Query: 1091 catgagtacttcaaggaccttgaagtggtacagtgacc 1128
||||| ||||||||||||||||| ||||||| |||||
Sbjct: 187 catgaatacttcaaggaccttgagatggtacaatgacc 224
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 311 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 369
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 370 cgctaaatagatcaccgtcttggtctct 397
>gb|C22594.1|C22594 C22594 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R2531_3Z, mRNA sequence
Length = 462
Score = 186 bits (94), Expect = 2e-044
Identities = 187/218 (85%)
Strand = Plus / Plus
Query: 911 aatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccagg 970
||||| || |||||||||||||| || | || ||||||| |||| | |||||||||| |
Sbjct: 9 aatgaacaaagttggccaggagttagctcattacctgactacaagtctgctttccccaag 68
Query: 971 tggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggacctt 1030
|||||||| ||||| || ||||| | ||||| | ||||||||||||||| |||||||||
Sbjct: 69 tggcaagcacaggatcttgcaactattgtccctactcttgaccctgctggtttggacctt 128
Query: 1031 ctctctaaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgag 1090
||||||||||||||||| |||||||||| |||||| |||||||| || || || ||||||
Sbjct: 129 ctctctaaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgag 188
Query: 1091 catgagtacttcaaggaccttgaagtggtacagtgacc 1128
||||| ||||||||||||||||| ||||||| |||||
Sbjct: 189 catgaatacttcaaggaccttgagatggtacaatgacc 226
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 313 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 371
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 372 cgctaaatagatcaccgtcttggtctct 399
>gb|CF328672.1|CF328672 NACL--03-K24.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--03-K24, mRNA
sequence
Length = 443
Score = 186 bits (94), Expect = 2e-044
Identities = 187/218 (85%)
Strand = Plus / Plus
Query: 911 aatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccagg 970
||||| || |||||||||||||| || | || ||||||| |||| | |||||||||| |
Sbjct: 9 aatgaacaaagttggccaggagttagctcattacctgactacaagtctgctttccccaag 68
Query: 971 tggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggacctt 1030
|||||||| ||||| || ||||| | ||||| | ||||||||||||||| |||||||||
Sbjct: 69 tggcaagcacaggatcttgcaactattgtccctactcttgaccctgctggtttggacctt 128
Query: 1031 ctctctaaaatgcttcgatacgagccaagcaaaagaatcacagcgaggcaagcacttgag 1090
||||||||||||||||| |||||||||| |||||| |||||||| || || || ||||||
Sbjct: 129 ctctctaaaatgcttcggtacgagccaaacaaaaggatcacagctagacaggctcttgag 188
Query: 1091 catgagtacttcaaggaccttgaagtggtacagtgacc 1128
||||| ||||||||||||||||| ||||||| |||||
Sbjct: 189 catgaatacttcaaggaccttgagatggtacaatgacc 226
Score = 87.7 bits (44), Expect = 1e-014
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1221 gcatttttgtcattcagctggatatttcgaatctggtgtgttttgagatgtattaaagaa 1280
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||
Sbjct: 313 gcatttttgtcattcagctggatatttcaaatcttgtgtg-tttgatatgtattcaggaa 371
Query: 1281 cgtcaaatagattaccgccttggtctct 1308
|| |||||||| |||| ||||||||||
Sbjct: 372 cgctaaatagatcaccgtcttggtctct 399
>gb|D24174.1|D24174 RICR1468A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1468_2A, mRNA sequence
Length = 317
Score = 172 bits (87), Expect = 3e-040
Identities = 102/107 (95%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 207 atggagcagtacgagaaggaggagaagattggggagggcacgtacggggtggtgtacagg 266
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccg 348
|||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 267 gcgcgggacaaggtcaccaacgagacgatcgcgctcaagaagatccg 313
>dbj|AK063438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E09, full
insert sequence
Length = 1595
Score = 172 bits (87), Expect = 3e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 315 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 374
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 375 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcag 433
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 852 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 911
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 912 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 971
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||| || |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 972 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggta 1023
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 242 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 300
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 465 gcatataccttgtcttcgagtacctggatctggacctcaagaagttcatggactcctgcc 524
|||||||||| |||||||||||||| || || |||||||||||| ||||||||| | ||
Sbjct: 593 gcatatacctcgtcttcgagtacctcgaccttgacctcaagaagcacatggactcatccc 652
Query: 525 cgga 528
||||
Sbjct: 653 cgga 656
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0575F10
Length = 150462
Score = 172 bits (87), Expect = 3e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 39054 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 39113
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 39114 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcag 39172
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 39591 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 39650
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 39651 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 39710
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||| || |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 39711 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggta 39762
Score = 117 bits (59), Expect = 2e-023
Identities = 140/167 (83%)
Strand = Plus / Plus
Query: 729 aggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattcca 788
|||| |||||||| ||||| ||||| || |||||||| ||||| || ||||| |||||||
Sbjct: 40677 aggtggtgacattgtggtatagagcacctgaaattcttcttggtgcaaggcattattcca 40736
Query: 789 caccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccac 848
| || ||||| ||||||| || || || || ||||| ||||||||||| || |||||||
Sbjct: 40737 cccctgttgacatgtggtcagttggttgcatttttgctgaaatggtgaatcagaagccac 40796
Query: 849 tattccctggcgattctgagatcgacgaactttttaagatattcagg 895
|||| ||||| ||||||||||| || ||||| |||||||| ||||||
Sbjct: 40797 tatttcctggagattctgagattgatgaactctttaagattttcagg 40843
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 38981 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 39039
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 465 gcatataccttgtcttcgagtacctggatctggacctcaagaagttcatggactcctgcc 524
|||||||||| |||||||||||||| || || |||||||||||| ||||||||| | ||
Sbjct: 39332 gcatatacctcgtcttcgagtacctcgaccttgacctcaagaagcacatggactcatccc 39391
Query: 525 cgga 528
||||
Sbjct: 39392 cgga 39395
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 41940 gagcacgagtacttcaaggacctggaagtgg 41970
>gb|AACV01003234.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003234, whole
genome shotgun sequence
Length = 7342
Score = 172 bits (87), Expect = 3e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 968 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 1027
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 1028 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcag 1086
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 1505 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 1564
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 1565 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 1624
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||| || |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1625 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggta 1676
Score = 109 bits (55), Expect = 4e-021
Identities = 139/167 (83%)
Strand = Plus / Plus
Query: 729 aggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattcca 788
|||| |||| ||| ||||| ||||| || |||||||| ||||| || ||||| |||||||
Sbjct: 2591 aggtggtgaaattgtggtatagagcacctgaaattcttcttggtgcaaggcattattcca 2650
Query: 789 caccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccac 848
| || ||||| ||||||| || || || || ||||| ||||||||||| || |||||||
Sbjct: 2651 cccctgttgacatgtggtcagttggttgcatttttgctgaaatggtgaatcagaagccac 2710
Query: 849 tattccctggcgattctgagatcgacgaactttttaagatattcagg 895
|||| ||||| ||||||||||| || ||||| |||||||| ||||||
Sbjct: 2711 tatttcctggagattctgagattgatgaactctttaagattttcagg 2757
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 895 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 953
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 465 gcatataccttgtcttcgagtacctggatctggacctcaagaagttcatggactcctgcc 524
|||||||||| |||||||||||||| || || |||||||||||| ||||||||| | ||
Sbjct: 1246 gcatatacctcgtcttcgagtacctcgaccttgacctcaagaagcacatggactcatccc 1305
Query: 525 cgga 528
||||
Sbjct: 1306 cgga 1309
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 3854 gagcacgagtacttcaaggacctggaagtgg 3884
>ref|NT_107175.1| Oryza sativa (japonica cultivar-group)
Length = 2882457
Score = 172 bits (87), Expect = 3e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1207963 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 1208022
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 1208023 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcag 1208081
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 1208500 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 1208559
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 1208560 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 1208619
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||| || |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1208620 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggta 1208671
Score = 117 bits (59), Expect = 2e-023
Identities = 140/167 (83%)
Strand = Plus / Plus
Query: 729 aggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattcca 788
|||| |||||||| ||||| ||||| || |||||||| ||||| || ||||| |||||||
Sbjct: 1209586 aggtggtgacattgtggtatagagcacctgaaattcttcttggtgcaaggcattattcca 1209645
Query: 789 caccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccac 848
| || ||||| ||||||| || || || || ||||| ||||||||||| || |||||||
Sbjct: 1209646 cccctgttgacatgtggtcagttggttgcatttttgctgaaatggtgaatcagaagccac 1209705
Query: 849 tattccctggcgattctgagatcgacgaactttttaagatattcagg 895
|||| ||||| ||||||||||| || ||||| |||||||| ||||||
Sbjct: 1209706 tatttcctggagattctgagattgatgaactctttaagattttcagg 1209752
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1207890 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 1207948
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 465 gcatataccttgtcttcgagtacctggatctggacctcaagaagttcatggactcctgcc 524
|||||||||| |||||||||||||| || || |||||||||||| ||||||||| | ||
Sbjct: 1208241 gcatatacctcgtcttcgagtacctcgaccttgacctcaagaagcacatggactcatccc 1208300
Query: 525 cgga 528
||||
Sbjct: 1208301 cgga 1208304
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 1210849 gagcacgagtacttcaaggacctggaagtgg 1210879
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 172 bits (87), Expect = 3e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1227345 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 1227404
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 1227405 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcag 1227463
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 1227882 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 1227941
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 1227942 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 1228001
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||| || |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1228002 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggta 1228053
Score = 109 bits (55), Expect = 4e-021
Identities = 139/167 (83%)
Strand = Plus / Plus
Query: 729 aggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattcca 788
|||| |||| ||| ||||| ||||| || |||||||| ||||| || ||||| |||||||
Sbjct: 1228968 aggtggtgaaattgtggtatagagcacctgaaattcttcttggtgcaaggcattattcca 1229027
Query: 789 caccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccac 848
| || ||||| ||||||| || || || || ||||| ||||||||||| || |||||||
Sbjct: 1229028 cccctgttgacatgtggtcagttggttgcatttttgctgaaatggtgaatcagaagccac 1229087
Query: 849 tattccctggcgattctgagatcgacgaactttttaagatattcagg 895
|||| ||||| ||||||||||| || ||||| |||||||| ||||||
Sbjct: 1229088 tatttcctggagattctgagattgatgaactctttaagattttcagg 1229134
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1227272 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 1227330
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 465 gcatataccttgtcttcgagtacctggatctggacctcaagaagttcatggactcctgcc 524
|||||||||| |||||||||||||| || || |||||||||||| ||||||||| | ||
Sbjct: 1227623 gcatatacctcgtcttcgagtacctcgaccttgacctcaagaagcacatggactcatccc 1227682
Query: 525 cgga 528
||||
Sbjct: 1227683 cgga 1227686
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 1230231 gagcacgagtacttcaaggacctggaagtgg 1230261
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 172 bits (87), Expect = 3e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1227345 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 1227404
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 1227405 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcag 1227463
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 1227882 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 1227941
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 1227942 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 1228001
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||| || |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1228002 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggta 1228053
Score = 109 bits (55), Expect = 4e-021
Identities = 139/167 (83%)
Strand = Plus / Plus
Query: 729 aggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattcca 788
|||| |||| ||| ||||| ||||| || |||||||| ||||| || ||||| |||||||
Sbjct: 1228968 aggtggtgaaattgtggtatagagcacctgaaattcttcttggtgcaaggcattattcca 1229027
Query: 789 caccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccac 848
| || ||||| ||||||| || || || || ||||| ||||||||||| || |||||||
Sbjct: 1229028 cccctgttgacatgtggtcagttggttgcatttttgctgaaatggtgaatcagaagccac 1229087
Query: 849 tattccctggcgattctgagatcgacgaactttttaagatattcagg 895
|||| ||||| ||||||||||| || ||||| |||||||| ||||||
Sbjct: 1229088 tatttcctggagattctgagattgatgaactctttaagattttcagg 1229134
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1227272 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 1227330
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 465 gcatataccttgtcttcgagtacctggatctggacctcaagaagttcatggactcctgcc 524
|||||||||| |||||||||||||| || || |||||||||||| ||||||||| | ||
Sbjct: 1227623 gcatatacctcgtcttcgagtacctcgaccttgacctcaagaagcacatggactcatccc 1227682
Query: 525 cgga 528
||||
Sbjct: 1227683 cgga 1227686
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 1230231 gagcacgagtacttcaaggacctggaagtgg 1230261
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 172 bits (87), Expect = 3e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 317 accaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgtcccg 376
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1207963 accaacgagacgatcgcgctcaagaagatccgcctggagcaggaggacgagggcgtcccc 1208022
Query: 377 tccaccgccatccgcgagatctctctcctcaaggagatgaaccacggcaacatcgtcag 435
||||||||||||||||||||||| || |||||||||||| | || |||||||||||||
Sbjct: 1208023 tccaccgccatccgcgagatctcgctgctcaaggagatgcagcatcgcaacatcgtcag 1208081
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 562 cctctaccagatactccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||||||| ||||| || ||||||||||||| || || | ||||| ||||||||
Sbjct: 1208500 cctctaccagattctccggggcattgcgtactgccactcgcaccgtgttctccaccgaga 1208559
Query: 622 tttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgcagactt 681
|||||| || |||||| | ||||||||||||| || || || ||||||| || |||||
Sbjct: 1208560 tttgaagccccagaacctgctgatagatcggcgtaccaactcattgaagctcgcggactt 1208619
Query: 682 tggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||| || |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1208620 tgggttggccagggcatttggcattcctgtccggacatttactcacgaggta 1208671
Score = 117 bits (59), Expect = 2e-023
Identities = 140/167 (83%)
Strand = Plus / Plus
Query: 729 aggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattcca 788
|||| |||||||| ||||| ||||| || |||||||| ||||| || ||||| |||||||
Sbjct: 1209586 aggtggtgacattgtggtatagagcacctgaaattcttcttggtgcaaggcattattcca 1209645
Query: 789 caccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccac 848
| || ||||| ||||||| || || || || ||||| ||||||||||| || |||||||
Sbjct: 1209646 cccctgttgacatgtggtcagttggttgcatttttgctgaaatggtgaatcagaagccac 1209705
Query: 849 tattccctggcgattctgagatcgacgaactttttaagatattcagg 895
|||| ||||| ||||||||||| || ||||| |||||||| ||||||
Sbjct: 1209706 tatttcctggagattctgagattgatgaactctttaagattttcagg 1209752
Score = 109 bits (55), Expect = 4e-021
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 244 ggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaagg 302
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1207890 ggagcagtacgagaaggtggagaagatcggggaggggacgtacggggtggtgtacaagg 1207948
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 465 gcatataccttgtcttcgagtacctggatctggacctcaagaagttcatggactcctgcc 524
|||||||||| |||||||||||||| || || |||||||||||| ||||||||| | ||
Sbjct: 1208241 gcatatacctcgtcttcgagtacctcgaccttgacctcaagaagcacatggactcatccc 1208300
Query: 525 cgga 528
||||
Sbjct: 1208301 cgga 1208304
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1088 gagcatgagtacttcaaggaccttgaagtgg 1118
||||| ||||||||||||||||| |||||||
Sbjct: 1210849 gagcacgagtacttcaaggacctggaagtgg 1210879
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,908,794
Number of Sequences: 438736
Number of extensions: 1908794
Number of successful extensions: 13072
Number of sequences better than 0.5: 107
Number of HSP's better than 0.5 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12122
Number of HSP's gapped (non-prelim): 918
length of query: 1354
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1333
effective length of database: 2,791,206,460
effective search space: 3720678211180
effective search space used: 3720678211180
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)