BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404863.2.1
(672 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB647910.1|CB647910 OSJNEb11A19.r OSJNEb Oryza sativa (j... 266 1e-068
gb|CB648443.1|CB648443 OSJNEb11N06.r OSJNEb Oryza sativa (j... 266 1e-068
gb|CB649982.1|CB649982 OSJNEb14D07.r OSJNEb Oryza sativa (j... 266 1e-068
gb|CB653961.1|CB653961 OSJNEc05H12.r OSJNEc Oryza sativa (j... 266 1e-068
gb|CB656682.1|CB656682 OSJNEc11F02.r OSJNEc Oryza sativa (j... 266 1e-068
gb|CB669767.1|CB669767 OSJNEe02I01.f OSJNEe Oryza sativa (j... 266 1e-068
gb|CB674915.1|CB674915 OSJNEe10E05.r OSJNEe Oryza sativa (j... 266 1e-068
dbj|AK061976.1| Oryza sativa (japonica cultivar-group) cDNA... 266 1e-068
dbj|AK064779.1| Oryza sativa (japonica cultivar-group) cDNA... 266 1e-068
gb|AACV01017697.1| Oryza sativa (japonica cultivar-group) c... 266 1e-068
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 266 1e-068
ref|NM_190595.1| Oryza sativa (japonica cultivar-group), p... 266 1e-068
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 266 1e-068
dbj|AP004127.1| Oryza sativa (japonica cultivar-group) geno... 266 1e-068
dbj|AP003251.3| Oryza sativa (japonica cultivar-group) geno... 266 1e-068
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 266 1e-068
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 266 1e-068
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 266 1e-068
gb|CX056264.1|CX056264 B010802E01 Rice cold stress germinat... 262 2e-067
gb|CF318273.1|CF318273 HD--08-F10.g1 OsHDAC1-overexpressing... 258 3e-066
dbj|AK122126.1| Oryza sativa (japonica cultivar-group) cDNA... 258 3e-066
gb|CB648170.1|CB648170 OSJNEb11H03.r OSJNEb Oryza sativa (j... 250 8e-064
gb|CB648219.1|CB648219 OSJNEb11I04.r OSJNEb Oryza sativa (j... 250 8e-064
gb|CB660953.1|CB660953 OSJNEd03D08.r OSJNEd Oryza sativa (j... 250 8e-064
gb|CB662524.1|CB662524 OSJNEd06K08.f OSJNEd Oryza sativa (j... 250 8e-064
gb|CB662525.1|CB662525 OSJNEd06K08.r OSJNEd Oryza sativa (j... 250 8e-064
gb|CB665497.1|CB665497 OSJNEd11P11.r OSJNEd Oryza sativa (j... 250 8e-064
gb|CB672103.1|CB672103 OSJNEe05P12.r OSJNEe Oryza sativa (j... 250 8e-064
gb|CB672105.1|CB672105 OSJNEe05P13.r OSJNEe Oryza sativa (j... 250 8e-064
gb|CB674119.1|CB674119 OSJNEe09A09.r OSJNEe Oryza sativa (j... 250 8e-064
gb|CB674427.1|CB674427 OSJNEe09H13.r OSJNEe Oryza sativa (j... 250 8e-064
gb|CB675124.1|CB675124 OSJNEe10K07.r OSJNEe Oryza sativa (j... 250 8e-064
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 250 8e-064
gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) c... 250 8e-064
ref|XM_480870.1| Oryza sativa (japonica cultivar-group), mRNA 250 8e-064
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 250 8e-064
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 250 8e-064
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 250 8e-064
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 250 8e-064
gb|AU029642.1|AU029642 AU029642 Rice panicle shorter than 3... 236 1e-059
gb|AU198025.1|AU198025 AU198025 Rice green shoot Oryza sati... 188 3e-045
gb|CA999640.1|CA999640 S234K_B06 Rice cold stress germinati... 178 3e-042
gb|CF318272.1|CF318272 HD--08-F10.b1 OsHDAC1-overexpressing... 147 9e-033
gb|CF297706.1|CF297706 30DGS--08-L20.g1 Rice leaf plasmid c... 137 9e-030
dbj|AK121972.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-011
gb|AC139168.1| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
gb|AC135209.2| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
gb|AACV01006289.1| Oryza sativa (japonica cultivar-group) c... 76 3e-011
ref|NM_187480.1| Oryza sativa (japonica cultivar-group), p... 76 3e-011
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 76 3e-011
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 76 3e-011
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
>gb|CB647910.1|CB647910 OSJNEb11A19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11A19 3', mRNA sequence
Length = 745
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 561 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 502
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 501 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 442
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 441 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 382
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 381 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 322
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 321 cctgagattgtcatgtga 304
>gb|CB648443.1|CB648443 OSJNEb11N06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11N06 3', mRNA sequence
Length = 815
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 601 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 542
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 541 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 482
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 481 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 422
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 421 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 362
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 361 cctgagattgtcatgtga 344
>gb|CB649982.1|CB649982 OSJNEb14D07.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14D07 3', mRNA sequence
Length = 720
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 543 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 484
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 483 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 424
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 423 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 364
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 363 gtttataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 304
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 303 cctgagattgtcatgtga 286
>gb|CB653961.1|CB653961 OSJNEc05H12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05H12 3', mRNA sequence
Length = 818
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 472 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 413
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 412 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 353
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 352 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 293
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 292 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 233
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 232 cctgagattgtcatgtga 215
>gb|CB656682.1|CB656682 OSJNEc11F02.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F02 3', mRNA sequence
Length = 823
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 494 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 435
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 434 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 375
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 374 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 315
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 314 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 255
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 254 cctgagattgtcatgtga 237
>gb|CB669767.1|CB669767 OSJNEe02I01.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02I01 5', mRNA sequence
Length = 825
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 648 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 589
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 588 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 529
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 528 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 469
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 468 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 409
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 408 cctgagattgtcatgtga 391
>gb|CB674915.1|CB674915 OSJNEe10E05.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10E05 3', mRNA sequence
Length = 750
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 410 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 351
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 350 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 291
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 290 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 231
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 230 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 171
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 170 cctgagattgtcatgtga 153
>dbj|AK061976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A03, full
insert sequence
Length = 1655
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 1024 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 1083
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 1084 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 1143
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 1144 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 1203
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 1204 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 1263
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 1264 cctgagattgtcatgtga 1281
>dbj|AK064779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B04, full
insert sequence
Length = 1479
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 1025 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 1084
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 1085 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 1144
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 1145 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 1204
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 1205 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 1264
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 1265 cctgagattgtcatgtga 1282
>gb|AACV01017697.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017697, whole
genome shotgun sequence
Length = 39221
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 19725 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 19666
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 19665 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 19606
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 19605 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 19546
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 19545 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 19486
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 19485 cctgagattgtcatgtga 19468
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 36471329 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 36471388
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 36471389 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 36471448
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 36471449 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 36471508
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 36471509 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 36471568
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 36471569 cctgagattgtcatgtga 36471586
>ref|NM_190595.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1086
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 829 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 888
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 889 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 948
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 949 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 1008
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 1009 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 1068
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 1069 cctgagattgtcatgtga 1086
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 10918712 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 10918771
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 10918772 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 10918831
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 10918832 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 10918891
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 10918892 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 10918951
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 10918952 cctgagattgtcatgtga 10918969
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0005H10
Length = 142885
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 42498 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 42557
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 42558 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 42617
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 42618 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 42677
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 42678 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 42737
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 42738 cctgagattgtcatgtga 42755
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0446B05
Length = 149145
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 140536 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 140595
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 140596 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 140655
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 140656 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 140715
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 140716 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 140775
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 140776 cctgagattgtcatgtga 140793
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067
genomic scaffold, whole genome shotgun sequence
Length = 19501165
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 181267 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 181208
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 181207 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 181148
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 181147 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 181088
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 181087 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 181028
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 181027 cctgagattgtcatgtga 181010
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 7783273 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 7783214
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 7783213 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 7783154
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 7783153 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 7783094
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 7783093 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 7783034
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 7783033 cctgagattgtcatgtga 7783016
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 266 bits (134), Expect = 1e-068
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 36390659 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 36390718
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 36390719 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 36390778
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 36390779 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 36390838
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 36390839 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 36390898
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 36390899 cctgagattgtcatgtga 36390916
>gb|CX056264.1|CX056264 B010802E01 Rice cold stress germination cDNA-AFLP Oryza sativa
(japonica cultivar-group) cDNA clone B010802E01 5'
similar to Putative GDP-mannose pyrophosphorylase [O.
sativa], mRNA sequence
Length = 419
Score = 262 bits (132), Expect = 2e-067
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 256 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 197
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 196 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 137
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 136 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 77
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 76 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 17
Query: 244 cctgagatcgtcatgt 259
|||||||| |||||||
Sbjct: 16 cctgagattgtcatgt 1
>gb|CF318273.1|CF318273 HD--08-F10.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-F10, mRNA sequence
Length = 683
Score = 258 bits (130), Expect = 3e-066
Identities = 226/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 658 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 599
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 598 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 539
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 538 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 479
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| |||||||||||| |||| || |||||||||||||||||||| |||||
Sbjct: 478 gtttataccaacggcggtgttgttttcccgcacaaagagatcaagtcaagcatcctgaag 419
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 418 cctgagattgtcatgtga 401
>dbj|AK122126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132D02, full
insert sequence
Length = 1708
Score = 258 bits (130), Expect = 3e-066
Identities = 226/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| ||||||||| |||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 1139 cctggatgcgtcgtggagaatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 1198
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 1199 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 1258
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| |||
Sbjct: 1259 caatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgag 1318
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 1319 gtctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaag 1378
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 1379 cctgagattgtcatgtga 1396
>gb|CB648170.1|CB648170 OSJNEb11H03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11H03 3', mRNA sequence
Length = 773
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 457 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 398
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 397 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 338
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 337 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 278
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 277 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 218
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 217 cctgagattgtcatgtga 200
>gb|CB648219.1|CB648219 OSJNEb11I04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11I04 3', mRNA sequence
Length = 801
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 463 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 404
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 403 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 344
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 343 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 284
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 283 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 224
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 223 cctgagattgtcatgtga 206
>gb|CB660953.1|CB660953 OSJNEd03D08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd03D08 3', mRNA sequence
Length = 715
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 354 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 295
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 294 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 235
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 234 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 175
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 174 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 115
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 114 cctgagattgtcatgtga 97
>gb|CB662524.1|CB662524 OSJNEd06K08.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06K08 5', mRNA sequence
Length = 859
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 424 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 365
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 364 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 305
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 304 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 245
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 244 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 185
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 184 cctgagattgtcatgtga 167
>gb|CB662525.1|CB662525 OSJNEd06K08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06K08 3', mRNA sequence
Length = 825
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 424 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 365
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 364 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 305
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 304 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 245
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 244 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 185
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 184 cctgagattgtcatgtga 167
>gb|CB665497.1|CB665497 OSJNEd11P11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11P11 3', mRNA sequence
Length = 815
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 412 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 353
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 352 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 293
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 292 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 233
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 232 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 173
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 172 cctgagattgtcatgtga 155
>gb|CB672103.1|CB672103 OSJNEe05P12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05P12 3', mRNA sequence
Length = 818
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 463 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 404
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 403 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 344
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 343 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 284
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 283 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 224
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 223 cctgagattgtcatgtga 206
>gb|CB672105.1|CB672105 OSJNEe05P13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05P13 3', mRNA sequence
Length = 827
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 462 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 403
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 402 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 343
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 342 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 283
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 282 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 223
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 222 cctgagattgtcatgtga 205
>gb|CB674119.1|CB674119 OSJNEe09A09.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09A09 3', mRNA sequence
Length = 804
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 467 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 408
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 407 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 348
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 347 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 288
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 287 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 228
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 227 cctgagattgtcatgtga 210
>gb|CB674427.1|CB674427 OSJNEe09H13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09H13 3', mRNA sequence
Length = 916
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 482 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 423
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 422 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 363
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 362 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 303
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 302 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 243
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 242 cctgagattgtcatgtga 225
>gb|CB675124.1|CB675124 OSJNEe10K07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10K07 3', mRNA sequence
Length = 823
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 420 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 361
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 360 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 301
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 300 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 241
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 240 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 181
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 180 cctgagattgtcatgtga 163
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0682A06
Length = 142023
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 76431 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 76372
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 76371 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 76312
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 76311 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 76252
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 76251 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 76192
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 76191 cctgagattgtcatgtga 76174
>gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002670, whole
genome shotgun sequence
Length = 40539
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 20040 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 19981
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 19980 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 19921
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 19920 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 19861
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 19860 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 19801
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 19800 cctgagattgtcatgtga 19783
>ref|XM_480870.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1086
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 829 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 888
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 889 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 948
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 949 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 1008
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 1009 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 1068
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 1069 cctgagattgtcatgtga 1086
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 8103848 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 8103789
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 8103788 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 8103729
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 8103728 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 8103669
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 8103668 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 8103609
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 8103608 cctgagattgtcatgtga 8103591
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 10671155 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 10671214
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 10671215 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 10671274
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 10671275 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 10671334
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 10671335 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 10671394
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 10671395 cctgagattgtcatgtga 10671412
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 35872876 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 35872935
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 35872936 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 35872995
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 35872996 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 35873055
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 35873056 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 35873115
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 35873116 cctgagattgtcatgtga 35873133
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 250 bits (126), Expect = 8e-064
Identities = 225/258 (87%)
Strand = Plus / Minus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 8336322 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 8336263
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 8336262 cgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 8336203
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| |||
Sbjct: 8336202 caatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatgag 8336143
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 8336142 gtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaaa 8336083
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 8336082 cctgagattgtcatgtga 8336065
>gb|AU029642.1|AU029642 AU029642 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31176_6Z, mRNA sequence
Length = 665
Score = 236 bits (119), Expect = 1e-059
Identities = 225/259 (86%), Gaps = 1/259 (0%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggt-gt 62
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| ||
Sbjct: 313 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggccgt 372
Query: 63 gcgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgg 122
|||||| ||||||||||| ||||| || ||||||||||| || |||||||||||||||||
Sbjct: 373 gcgtattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgg 432
Query: 123 acaatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacga 182
|||||||||||||||||| |||||||| ||||| || ||||| || |||| ||||| ||
Sbjct: 433 acaatgggcacggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatga 492
Query: 183 ggtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaa 242
||| || | ||| ||||||||| ||||||| || ||||||||||| |||||||| ||||
Sbjct: 493 ggtctataccaacggcggtgttattctcccgcacaaagagatcaaatcaagcatcctgaa 552
Query: 243 gcctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 553 acctgagattgtcatgtga 571
>gb|AU198025.1|AU198025 AU198025 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15059, mRNA sequence
Length = 411
Score = 188 bits (95), Expect = 3e-045
Identities = 215/258 (83%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||| | || |||||||| |||
Sbjct: 54 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcncggtgatgcgtggcgtg 113
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
||||| || |||||||| ||||| || ||||||||||| || |||| |||||||||||||
Sbjct: 114 cgtattaaaaagcatgcttgcatatcaaacagcattattggatggcnctcaactgttgga 173
Query: 124 caatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgag 183
|||||||| |||||||| |||||||| ||||| || ||||| || |||| ||||| ||
Sbjct: 174 caatgggcccggatagaaaatatgactatcctaggagaggacgtacatgtaggtgatnag 233
Query: 184 gtatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaag 243
|| || | ||| ||||||||| || | || | ||| ||||||| |||||||| | ||
Sbjct: 234 gtntataccaacggcggtgttattntnccgcncaaanagatcaaatcaagcatcctnaaa 293
Query: 244 cctgagatcgtcatgtga 261
|||||||| |||||||||
Sbjct: 294 cctgagattgtcatgtga 311
>gb|CA999640.1|CA999640 S234K_B06 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 154
Score = 178 bits (90), Expect = 3e-042
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggcgtgaggctttcccgctgcactgtcatgcgtggtgtg 63
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||
Sbjct: 1 cctggatgcgtcgtggaggatggtgtgaggctttcccgttgcacggtgatgcgtggcgtg 60
Query: 64 cgtatcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttgga 123
| || ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 61 cacattaagaagcatgcttgcatatcaaacagcattattggatggcactcaactgttgga 120
Query: 124 caatgggcacggatagagaatatgaccatcctgg 157
||||||||||||||||| |||||||| |||||||
Sbjct: 121 caatgggcacggatagaaaatatgactatcctgg 154
>gb|CF318272.1|CF318272 HD--08-F10.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-F10, mRNA sequence
Length = 485
Score = 147 bits (74), Expect = 9e-033
Identities = 140/158 (88%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 4 cctggatgtgtcgtggaggatggc-gtgaggctttcccgctgcactgtcatgcgtggt-g 61
|||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |
Sbjct: 327 cctggatgcgtcgtggaggatggttgtgaggctttcccgttgcacggtgatgcgtgggcg 386
Query: 62 tgcgtatcaagaagcatgcctgcatctcgaacagcattatcggg-tggcactcaactgtt 120
||| || ||||||||||| ||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 387 tgcacattaagaagcatgcttgcatatcaaacagcattattgggatggcactcaactgtt 446
Query: 121 ggacaatgggcacggatagagaatatgaccatcctggg 158
|||||||||||||||||||| |||||||| ||||||||
Sbjct: 447 ggacaatgggcacggatagaaaatatgactatcctggg 484
>gb|CF297706.1|CF297706 30DGS--08-L20.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--08-L20, mRNA sequence
Length = 340
Score = 137 bits (69), Expect = 9e-030
Identities = 120/137 (87%)
Strand = Plus / Minus
Query: 125 aatgggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgagg 184
|||||||||||||||| |||||||| |||||||| ||||| || |||| ||||| ||||
Sbjct: 340 aatgggcacggatagaaaatatgactatcctgggagaggacgtacatgtaggtgatgagg 281
Query: 185 tatacagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaagc 244
| || | ||| ||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 280 tctataccaacggcggtgttgttctcccgcacaaagagatcaagtcaagcatcctgaagc 221
Query: 245 ctgagatcgtcatgtga 261
||||||| |||||||||
Sbjct: 220 ctgagattgtcatgtga 204
>dbj|AK121972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108I03, full
insert sequence
Length = 1476
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Plus
Query: 68 tcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttggacaat 127
|||||||||| || |||||||| | |||||| |||||||||||||| || || || |
Sbjct: 1081 tcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgt 1140
Query: 128 gggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgaggtat 187
|||| || | ||||| ||||||||||| |||||||| || || | | |||||||| |
Sbjct: 1141 gggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtct 1200
Query: 188 acagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaagcctg 247
||||||| ||||| || || ||||| || || ||||||||||| ||||| | ||||| |
Sbjct: 1201 acagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccg 1260
Query: 248 agatcgtcatgtga 261
|||| |||||||||
Sbjct: 1261 agattgtcatgtga 1274
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
complete sequence
Length = 126027
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 68 tcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttggacaat 127
|||||||||| || |||||||| | |||||| |||||||||||||| || || || |
Sbjct: 72858 tcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgt 72799
Query: 128 gggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgaggtat 187
|||| || | ||||| ||||||||||| |||||||| || || | | |||||||| |
Sbjct: 72798 gggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtct 72739
Query: 188 acagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaagcctg 247
||||||| ||||| || || ||||| || || ||||||||||| ||||| | ||||| |
Sbjct: 72738 acagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccg 72679
Query: 248 agatcgtcatgtga 261
|||| |||||||||
Sbjct: 72678 agattgtcatgtga 72665
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0071M09, complete sequence
Length = 143595
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 68 tcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttggacaat 127
|||||||||| || |||||||| | |||||| |||||||||||||| || || || |
Sbjct: 6831 tcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgt 6772
Query: 128 gggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgaggtat 187
|||| || | ||||| ||||||||||| |||||||| || || | | |||||||| |
Sbjct: 6771 gggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtct 6712
Query: 188 acagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaagcctg 247
||||||| ||||| || || ||||| || || ||||||||||| ||||| | ||||| |
Sbjct: 6711 acagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccg 6652
Query: 248 agatcgtcatgtga 261
|||| |||||||||
Sbjct: 6651 agattgtcatgtga 6638
>gb|AACV01006289.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006289, whole
genome shotgun sequence
Length = 25280
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Plus
Query: 68 tcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttggacaat 127
|||||||||| || |||||||| | |||||| |||||||||||||| || || || |
Sbjct: 19224 tcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgt 19283
Query: 128 gggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgaggtat 187
|||| || | ||||| ||||||||||| |||||||| || || | | |||||||| |
Sbjct: 19284 gggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtct 19343
Query: 188 acagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaagcctg 247
||||||| ||||| || || ||||| || || ||||||||||| ||||| | ||||| |
Sbjct: 19344 acagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccg 19403
Query: 248 agatcgtcatgtga 261
|||| |||||||||
Sbjct: 19404 agattgtcatgtga 19417
>ref|NM_187480.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1086
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Plus
Query: 68 tcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttggacaat 127
|||||||||| || |||||||| | |||||| |||||||||||||| || || || |
Sbjct: 893 tcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgt 952
Query: 128 gggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgaggtat 187
|||| || | ||||| ||||||||||| |||||||| || || | | |||||||| |
Sbjct: 953 gggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtct 1012
Query: 188 acagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaagcctg 247
||||||| ||||| || || ||||| || || ||||||||||| ||||| | ||||| |
Sbjct: 1013 acagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccg 1072
Query: 248 agatcgtcatgtga 261
|||| |||||||||
Sbjct: 1073 agattgtcatgtga 1086
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 68 tcaagaagcatgcctgcatctcgaacagcattatcgggtggcactcaactgttggacaat 127
|||||||||| || |||||||| | |||||| |||||||||||||| || || || |
Sbjct: 225621 tcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgt 225562
Query: 128 gggcacggatagagaatatgaccatcctgggcgaggatgttcatgggggtgacgaggtat 187
|||| || | ||||| ||||||||||| |||||||| || || | | |||||||| |
Sbjct: 225561 gggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtct 225502
Query: 188 acagcaatggcggtgttgttctcccacagaaagagatcaagtcaagcattttgaagcctg 247
||||||| ||||| || || ||||| || || ||||||||||| ||||| | ||||| |
Sbjct: 225501 acagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccg 225442
Query: 248 agatcgtcatgtga 261
|||| |||||||||
Sbjct: 225441 agattgtcatgtga 225428
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,045,597
Number of Sequences: 438736
Number of extensions: 1045597
Number of successful extensions: 10146
Number of sequences better than 0.5: 54
Number of HSP's better than 0.5 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9809
Number of HSP's gapped (non-prelim): 323
length of query: 672
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 651
effective length of database: 2,791,206,460
effective search space: 1817075405460
effective search space used: 1817075405460
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)