BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.3
(1028 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA... 373 e-100
ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Oz... 369 2e-099
dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA... 365 3e-098
dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA... 341 5e-091
dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA... 341 5e-091
dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA... 341 5e-091
dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA... 341 5e-091
gb|CB646880.1|CB646880 OSJNEb09J04.r OSJNEb Oryza sativa (j... 325 3e-086
dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA... 325 3e-086
dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA... 325 3e-086
gb|CB646770.1|CB646770 OSJNEb09G16.r OSJNEb Oryza sativa (j... 317 7e-084
gb|CA755466.1|CA755466 BR030021000_PLATE_B11_82_092.ab1 OA ... 256 2e-065
gb|CB663613.1|CB663613 OSJNEd08M21.r OSJNEd Oryza sativa (j... 240 1e-060
gb|CO435743.1|CO435743 OsMR809 5MT resistant rice mutant cD... 220 1e-054
gb|AU181264.1|AU181264 AU181264 Rice callus (2001) Oryza sa... 210 1e-051
gb|C98487.1|C98487 C98487 Rice panicle at flowering stage O... 182 3e-043
gb|CF323377.1|CF323377 HDN--03-L03.g1 OsHDAC1-overexpressin... 165 6e-038
gb|AACV01000677.1| Oryza sativa (japonica cultivar-group) c... 157 1e-035
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 157 1e-035
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 157 1e-035
dbj|AP000836.1| Oryza sativa (japonica cultivar-group) geno... 157 1e-035
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 157 1e-035
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 157 1e-035
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 157 1e-035
gb|D23328.1|D23328 RICC2623A Rice callus Oryza sativa (japo... 143 2e-031
gb|CV733900.1|CV733900 FLO--09-A09.b1 Rice flower lambda ph... 141 9e-031
gb|AU225181.1|AU225181 AU225181 Oryza sativa Koshihikari pi... 125 5e-026
gb|D23445.1|D23445 RICC2825A Rice callus Oryza sativa (japo... 74 2e-010
gb|AU065539.1|AU065539 AU065539 Rice callus Oryza sativa (j... 74 2e-010
gb|AACV01008615.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
ref|NT_080056.2| Oryza sativa (japonica cultivar-group) 72 7e-010
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromoso... 72 7e-010
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
gb|CF325923.1|CF325923 JMT1--04-J16.g1 AtJMT-overexpressing... 70 3e-009
emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromoso... 56 4e-005
gb|AACV01000673.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
dbj|AP000837.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AQ689172.1|AQ689172 nbxb0079E19r CUGI Rice BAC Library O... 52 6e-004
gb|CF307494.1|CF307494 HDA1--06-N22.g1 OsHDAC1-overexpressi... 50 0.002
gb|AQ913186.1|AQ913186 nbeb0040D15f CUGI Rice BAC Library (... 48 0.010
gb|AQ954566.1|AQ954566 nbeb0071M13r CUGI Rice BAC Library (... 48 0.010
gb|CB674255.1|CB674255 OSJNEe09D12.r OSJNEe Oryza sativa (j... 46 0.038
dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.038
gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwill... 46 0.038
ref|XM_477327.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.038
gb|AQ256196.1|AQ256196 nbxb0015D14r CUGI Rice BAC Library O... 44 0.15
>dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E08, full
insert sequence
Length = 3047
Score = 373 bits (188), Expect = e-100
Identities = 640/790 (81%), Gaps = 3/790 (0%)
Strand = Plus / Plus
Query: 1 gatctcctggacattctgatgtaccgtctgttgctgctgttgttagttctcgtgaatggc 60
|||| |||||||| |||||| |||| || ||||||| || |||||||||||||||||||
Sbjct: 2086 gatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgtgaatggc 2145
Query: 61 ctcttatctcgaaatacagagcatctgtccgcacccaatcaccaaaaatggaaatgattg 120
||||| | || |||||||| || || ||||| | || ||||| || | ||||||||||
Sbjct: 2146 ctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaaatgattg 2205
Query: 121 actcattgtttaagccacgggaagct---gaagatgatggtctgatccgggagtgtctga 177
| | | |||||||||| | |||| ||||||||||| || || ||||||| |
Sbjct: 2206 atggactatttaagccacaaggagctcaggaagatgatggcctcattcgggagttattag 2265
Query: 178 ttgacttctacaccagttctgggaagagaaagcctgaccaagttatcatattcagggacg 237
|||||||||| |||||| |||| || | |||||||| ||||| || || |||||||| |
Sbjct: 2266 ttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttcagggatg 2325
Query: 238 gtgttagcgaaagtcagtttaatcaggtgctgaacattgagttgcaacaaatcatcgagg 297
| || || || || ||||||| |||||||||||||||||| || | ||||| || ||||
Sbjct: 2326 gggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaataattgagg 2385
Query: 298 cttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccagaaga 357
| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| |||||||
Sbjct: 2386 catgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacagaaga 2445
Query: 358 atcatcacactaaatttttcattcctggaaagccagataatgtcccaccaggaactgtgg 417
||||||| || |||||||| | |||||| | | |||| || || || || ||||| |
Sbjct: 2446 atcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggtactgttg 2505
Query: 418 tggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcatgctggaa 477
|||||||| |||||| ||||||| |||| || ||||||||||||||||| |||||||
Sbjct: 2506 tggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaa 2565
Query: 478 tgatcgggactacgaggccaactcactaccacatcctgcatgatgagataggcttcagtc 537
|||| || ||||| ||||| || || || || ||||| |||||||||||||||||| |
Sbjct: 2566 tgattggaactacaaggcctacacattatcatatccttcatgatgagataggcttctctg 2625
Query: 538 ctgatgatctgcaggagctggtgcattcgctctcttatgtgtaccaaaggagcacaacag 597
|||| ||||| |||||| |||| || || || || ||||| ||||| |||||||| ||||
Sbjct: 2626 ctgacgatcttcaggagttggtccactccctttcctatgtctaccagaggagcactacag 2685
Query: 598 ccatatcagtcgttgctcccatctgctacgcacatctggcagctgctcaggttggccagt 657
|||||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 2686 ccatatcagtcgttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagt 2745
Query: 658 tcataaagttcgatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgg 717
|||| |||||||| ||||||||||||||||| || || ||||| || ||||| |||||||
Sbjct: 2746 tcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgg 2805
Query: 718 gcagcgttccggtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttct 777
|||||| |||||| | |||||||| ||||||||| | ||||| |||||||| |||||||
Sbjct: 2806 gcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttct 2865
Query: 778 tttgctgagc 787
| ||||||||
Sbjct: 2866 tctgctgagc 2875
>ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa8518 predicted mRNA
Length = 2715
Score = 369 bits (186), Expect = 2e-099
Identities = 638/788 (80%), Gaps = 3/788 (0%)
Strand = Plus / Plus
Query: 1 gatctcctggacattctgatgtaccgtctgttgctgctgttgttagttctcgtgaatggc 60
|||| |||||||| |||||| |||| || ||||||| || |||||||||||||||||||
Sbjct: 1928 gatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgtgaatggc 1987
Query: 61 ctcttatctcgaaatacagagcatctgtccgcacccaatcaccaaaaatggaaatgattg 120
||||| | || |||||||| || || ||||| | || ||||| || | ||||||||||
Sbjct: 1988 ctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaaatgattg 2047
Query: 121 actcattgtttaagccacgggaagct---gaagatgatggtctgatccgggagtgtctga 177
| | | |||||||||| | |||| ||||||||||| || || ||||||| |
Sbjct: 2048 atggactatttaagccacaaggagctcaggaagatgatggcctcattcgggagttattag 2107
Query: 178 ttgacttctacaccagttctgggaagagaaagcctgaccaagttatcatattcagggacg 237
|||||||||| |||||| |||| || | |||||||| ||||| || || |||||||| |
Sbjct: 2108 ttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttcagggatg 2167
Query: 238 gtgttagcgaaagtcagtttaatcaggtgctgaacattgagttgcaacaaatcatcgagg 297
| || || || || ||||||| |||||||||||||||||| || | ||||| || ||||
Sbjct: 2168 gggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaataattgagg 2227
Query: 298 cttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccagaaga 357
| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| |||||||
Sbjct: 2228 catgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacagaaga 2287
Query: 358 atcatcacactaaatttttcattcctggaaagccagataatgtcccaccaggaactgtgg 417
||||||| || |||||||| | |||||| | | |||| || || || || ||||| |
Sbjct: 2288 atcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggtactgttg 2347
Query: 418 tggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcatgctggaa 477
|||||||| |||||| ||||||| |||| || ||||||||||||||||| |||||||
Sbjct: 2348 tggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaa 2407
Query: 478 tgatcgggactacgaggccaactcactaccacatcctgcatgatgagataggcttcagtc 537
|||| || ||||| ||||| || || || || ||||| |||||||||||||||||| |
Sbjct: 2408 tgattggaactacaaggcctacacattatcatatccttcatgatgagataggcttctctg 2467
Query: 538 ctgatgatctgcaggagctggtgcattcgctctcttatgtgtaccaaaggagcacaacag 597
|||| ||||| |||||| |||| || || || || ||||| ||||| |||||||| ||||
Sbjct: 2468 ctgacgatcttcaggagttggtccactccctttcctatgtctaccagaggagcactacag 2527
Query: 598 ccatatcagtcgttgctcccatctgctacgcacatctggcagctgctcaggttggccagt 657
|||||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 2528 ccatatcagtcgttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagt 2587
Query: 658 tcataaagttcgatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgg 717
|||| |||||||| ||||||||||||||||| || || ||||| || ||||| |||||||
Sbjct: 2588 tcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgg 2647
Query: 718 gcagcgttccggtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttct 777
|||||| |||||| | |||||||| ||||||||| | ||||| |||||||| |||||||
Sbjct: 2648 gcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttct 2707
Query: 778 tttgctga 785
| ||||||
Sbjct: 2708 tctgctga 2715
>dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111L20, full
insert sequence
Length = 3027
Score = 365 bits (184), Expect = 3e-098
Identities = 639/790 (80%), Gaps = 3/790 (0%)
Strand = Plus / Plus
Query: 1 gatctcctggacattctgatgtaccgtctgttgctgctgttgttagttctcgtgaatggc 60
|||| |||||||| |||||| |||| || ||||||| || |||||||||||||||||||
Sbjct: 2076 gatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgtgaatggc 2135
Query: 61 ctcttatctcgaaatacagagcatctgtccgcacccaatcaccaaaaatggaaatgattg 120
||||| | || |||||||| || || ||||| | || ||||| || | ||||||||||
Sbjct: 2136 ctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaaatgattg 2195
Query: 121 actcattgtttaagccacgggaagct---gaagatgatggtctgatccgggagtgtctga 177
| | | |||||||||| | |||| ||||||||||| || || ||||||| |
Sbjct: 2196 atggactatttaagccacaaggagctcaggaagatgatggcctcattcgggagttattag 2255
Query: 178 ttgacttctacaccagttctgggaagagaaagcctgaccaagttatcatattcagggacg 237
|||||||||| |||||| |||| || | |||||||| ||||| || || |||||||| |
Sbjct: 2256 ttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttcagggatg 2315
Query: 238 gtgttagcgaaagtcagtttaatcaggtgctgaacattgagttgcaacaaatcatcgagg 297
| || || || || ||||||| |||||||||||||||||| || | ||||| || ||||
Sbjct: 2316 gggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaataattgagg 2375
Query: 298 cttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccagaaga 357
| |||| |||||||| || || ||| ||| ||||| || ||||| |||| |||||||
Sbjct: 2376 caggcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacagaaga 2435
Query: 358 atcatcacactaaatttttcattcctggaaagccagataatgtcccaccaggaactgtgg 417
||||||| || |||||||| | |||||| | | |||| || || || || ||||| |
Sbjct: 2436 atcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggtactgttg 2495
Query: 418 tggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcatgctggaa 477
|||||||| |||||| ||||||| |||| || ||||||||||||||||| |||||||
Sbjct: 2496 tggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaa 2555
Query: 478 tgatcgggactacgaggccaactcactaccacatcctgcatgatgagataggcttcagtc 537
|||| || ||||| ||||| || || || || ||||| |||||||||||||||||| |
Sbjct: 2556 tgattggaactacaaggcctacacattatcatatccttcatgatgagataggcttctctg 2615
Query: 538 ctgatgatctgcaggagctggtgcattcgctctcttatgtgtaccaaaggagcacaacag 597
|||| ||||| |||||| |||| || || || || ||||| ||||| |||||||| ||||
Sbjct: 2616 ctgacgatcttcaggagttggtccactccctttcctatgtctaccagaggagcactacag 2675
Query: 598 ccatatcagtcgttgctcccatctgctacgcacatctggcagctgctcaggttggccagt 657
|||||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 2676 ccatatcagtcgttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagt 2735
Query: 658 tcataaagttcgatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgg 717
|||| |||||||| ||||||||||||||||| || || ||||| || ||||| |||||||
Sbjct: 2736 tcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgg 2795
Query: 718 gcagcgttccggtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttct 777
|||||| |||||| | |||||||| ||||||||| | ||||| |||||||| |||||||
Sbjct: 2796 gcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttct 2855
Query: 778 tttgctgagc 787
| ||||||||
Sbjct: 2856 tctgctgagc 2865
>dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F07, full
insert sequence
Length = 1196
Score = 341 bits (172), Expect = 5e-091
Identities = 612/756 (80%), Gaps = 2/756 (0%)
Strand = Plus / Plus
Query: 31 ttgctgctgttgttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtcc 90
||||||| || ||||| ||||| |||||||||| ||||| |||||||||||||| || |
Sbjct: 142 ttgctgcggtggttagctctcgccaatggcctctcatctctaaatacagagcatcggtgc 201
Query: 91 gcacccaatcaccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaag 150
||| || ||||| || | |||||||| || |||||||||||||| | | ||||||
Sbjct: 202 acactcagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaag 261
Query: 151 atgatggtctgatccgggagtgtctgattgacttctacaccagttctgggaagagaaagc 210
||||||| || || ||||| | ||||||||||||||||| |||||||| || | || |
Sbjct: 262 atgatggcctcattcgggaatcgctgattgacttctacactagttctggaaaacggaaac 321
Query: 211 ctgaccaagttatcatattcagggacggtgttagcgaaagtcagtttaatcaggtgctga 270
| || || |||||| | |||||||| || ||||| ||||| ||||||| |||||| | |
Sbjct: 322 cggatcatgttatcgttttcagggatggagttagtgaaagccagtttactcaggtcatta 381
Query: 271 acattgagttgcaacaaatcatcgaggcttgcaaatttcttgatgagaaatggaatccca 330
|||||||| | | || ||||| ||||| ||||||||||| |||||||| ||| || |
Sbjct: 382 acattgagcttgatcagatcattgaggcatgcaaatttctcgatgagaagtggtcaccaa 441
Query: 331 agttcacgttgattattgcccagaagaatcatcacactaaattttt-cattcctggaaag 389
||||||| ||||| |||| |||||||||||||| || |||||||| || || ||||
Sbjct: 442 agttcacagtgattgttgctcagaagaatcatcataccaaattttttcagtc-tggatct 500
Query: 390 ccagataatgtcccaccaggaactgtggtggacaacaaagtctgccatccaaagaacttc 449
||||||||||| || ||||| ||||| |||||||| |||| |||||||||| ||| |
Sbjct: 501 ccagataatgttccgccaggtactgttgtggacaaacaagtgtgccatccaaggaattat 560
Query: 450 gatttctacatgtgtgcgcatgctggaatgatcgggactacgaggccaactcactaccac 509
|| |||||||||||||| |||||||||||||| || || ||||||||||| || || ||
Sbjct: 561 gacttctacatgtgtgctcatgctggaatgattggaacgacgaggccaacacattatcat 620
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| || |||
Sbjct: 621 gttctgcacgatgagataggtttctcccctgatgatctgcaggagctagtgcactcactc 680
Query: 570 tcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgca 629
||||||||||| || || |||||||||||||||||||| |||||||| || ||||| ||
Sbjct: 681 tcttatgtgtatcagagaagcacaacagccatatcagttgttgctccgatttgctatgcc 740
Query: 630 catctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggagacgtcc 689
||||| || ||||||||||| ||| ||| | |||||||| || |||||||| ||||
Sbjct: 741 catcttgctgctgctcaggtgggcacattcctcaagttcgaagatatgtcggacgcgtcg 800
Query: 690 tccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgcgcctg 749
||||| || || || ||||| || | || || || ||||| | |||||||| |||||
Sbjct: 801 tccagccaaggaggtcatacgtctgtcggaagtgtaccggtgcctgagctgcctcgcctc 860
Query: 750 catgagaaagtgaggagctcgatgttcttttgctga 785
|||||||||||||||||||| ||||| || ||||||
Sbjct: 861 catgagaaagtgaggagctccatgtttttctgctga 896
>dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H02, full
insert sequence
Length = 1196
Score = 341 bits (172), Expect = 5e-091
Identities = 612/756 (80%), Gaps = 2/756 (0%)
Strand = Plus / Plus
Query: 31 ttgctgctgttgttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtcc 90
||||||| || ||||| ||||| |||||||||| ||||| |||||||||||||| || |
Sbjct: 142 ttgctgcggtggttagctctcgccaatggcctctcatctctaaatacagagcatcggtgc 201
Query: 91 gcacccaatcaccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaag 150
||| || ||||| || | |||||||| || |||||||||||||| | | ||||||
Sbjct: 202 acactcagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaag 261
Query: 151 atgatggtctgatccgggagtgtctgattgacttctacaccagttctgggaagagaaagc 210
||||||| || || ||||| | ||||||||||||||||| |||||||| || | || |
Sbjct: 262 atgatggcctcattcgggaatcgctgattgacttctacactagttctggaaaacggaaac 321
Query: 211 ctgaccaagttatcatattcagggacggtgttagcgaaagtcagtttaatcaggtgctga 270
| || || |||||| | |||||||| || ||||| ||||| ||||||| |||||| | |
Sbjct: 322 cggatcatgttatcgttttcagggatggagttagtgaaagccagtttactcaggtcatta 381
Query: 271 acattgagttgcaacaaatcatcgaggcttgcaaatttcttgatgagaaatggaatccca 330
|||||||| | | || ||||| ||||| ||||||||||| |||||||| ||| || |
Sbjct: 382 acattgagcttgatcagatcattgaggcatgcaaatttctcgatgagaagtggtcaccaa 441
Query: 331 agttcacgttgattattgcccagaagaatcatcacactaaattttt-cattcctggaaag 389
||||||| ||||| |||| |||||||||||||| || |||||||| || || ||||
Sbjct: 442 agttcacagtgattgttgctcagaagaatcatcataccaaattttttcagtc-tggatct 500
Query: 390 ccagataatgtcccaccaggaactgtggtggacaacaaagtctgccatccaaagaacttc 449
||||||||||| || ||||| ||||| |||||||| |||| |||||||||| ||| |
Sbjct: 501 ccagataatgttccgccaggtactgttgtggacaaacaagtgtgccatccaaggaattat 560
Query: 450 gatttctacatgtgtgcgcatgctggaatgatcgggactacgaggccaactcactaccac 509
|| |||||||||||||| |||||||||||||| || || ||||||||||| || || ||
Sbjct: 561 gacttctacatgtgtgctcatgctggaatgattggaacgacgaggccaacacattatcat 620
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| || |||
Sbjct: 621 gttctgcacgatgagataggtttctcccctgatgatctgcaggagctagtgcactcactc 680
Query: 570 tcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgca 629
||||||||||| || || |||||||||||||||||||| |||||||| || ||||| ||
Sbjct: 681 tcttatgtgtatcagagaagcacaacagccatatcagttgttgctccgatttgctatgcc 740
Query: 630 catctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggagacgtcc 689
||||| || ||||||||||| ||| ||| | |||||||| || |||||||| ||||
Sbjct: 741 catcttgctgctgctcaggtgggcacattcctcaagttcgaagatatgtcggacgcgtcg 800
Query: 690 tccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgcgcctg 749
||||| || || || ||||| || | || || || ||||| | |||||||| |||||
Sbjct: 801 tccagccaaggaggtcatacgtctgtcggaagtgtaccggtgcctgagctgcctcgcctc 860
Query: 750 catgagaaagtgaggagctcgatgttcttttgctga 785
|||||||||||||||||||| ||||| || ||||||
Sbjct: 861 catgagaaagtgaggagctccatgtttttctgctga 896
>dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C06, full
insert sequence
Length = 1885
Score = 341 bits (172), Expect = 5e-091
Identities = 612/756 (80%), Gaps = 2/756 (0%)
Strand = Plus / Plus
Query: 31 ttgctgctgttgttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtcc 90
||||||| || ||||| ||||| |||||||||| ||||| |||||||||||||| || |
Sbjct: 831 ttgctgcggtggttagctctcgccaatggcctctcatctctaaatacagagcatcggtgc 890
Query: 91 gcacccaatcaccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaag 150
||| || ||||| || | |||||||| || |||||||||||||| | | ||||||
Sbjct: 891 acactcagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaag 950
Query: 151 atgatggtctgatccgggagtgtctgattgacttctacaccagttctgggaagagaaagc 210
||||||| || || ||||| | ||||||||||||||||| |||||||| || | || |
Sbjct: 951 atgatggcctcattcgggaatcgctgattgacttctacactagttctggaaaacggaaac 1010
Query: 211 ctgaccaagttatcatattcagggacggtgttagcgaaagtcagtttaatcaggtgctga 270
| || || |||||| | |||||||| || ||||| ||||| ||||||| |||||| | |
Sbjct: 1011 cggatcatgttatcgttttcagggatggagttagtgaaagccagtttactcaggtcatta 1070
Query: 271 acattgagttgcaacaaatcatcgaggcttgcaaatttcttgatgagaaatggaatccca 330
|||||||| | | || ||||| ||||| ||||||||||| |||||||| ||| || |
Sbjct: 1071 acattgagcttgatcagatcattgaggcatgcaaatttctcgatgagaagtggtcgccaa 1130
Query: 331 agttcacgttgattattgcccagaagaatcatcacactaaattttt-cattcctggaaag 389
||||||| ||||| |||| |||||||||||||| || |||||||| || || ||||
Sbjct: 1131 agttcacagtgattgttgctcagaagaatcatcataccaaattttttcagtc-tggatct 1189
Query: 390 ccagataatgtcccaccaggaactgtggtggacaacaaagtctgccatccaaagaacttc 449
||||||||||| || ||||| ||||| |||||||| |||| |||||||||| ||| |
Sbjct: 1190 ccagataatgttccgccaggtactgttgtggacaaacaagtgtgccatccaaggaattat 1249
Query: 450 gatttctacatgtgtgcgcatgctggaatgatcgggactacgaggccaactcactaccac 509
|| |||||||||||||| |||||||||||||| || || ||||||||||| || || ||
Sbjct: 1250 gacttctacatgtgtgctcatgctggaatgattggaacgacgaggccaacacattatcat 1309
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| || |||
Sbjct: 1310 gttctgcacgatgagataggtttctcccctgatgatctgcaggagctagtgcactcactc 1369
Query: 570 tcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgca 629
||||||||||| || || |||||||||||||||||||| |||||||| || ||||| ||
Sbjct: 1370 tcttatgtgtatcagagaagcacaacagccatatcagttgttgctccgatttgctatgcc 1429
Query: 630 catctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggagacgtcc 689
||||| || ||||||||||| ||| ||| | |||||||| || |||||||| ||||
Sbjct: 1430 catcttgctgctgctcaggtgggcacattcctcaagttcgaagatatgtcggacgcgtcg 1489
Query: 690 tccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgcgcctg 749
||||| || || || ||||| || | || || || ||||| | |||||||| |||||
Sbjct: 1490 tccagccaaggaggtcatacgtctgtcggaagtgtaccggtgcctgagctgcctcgcctc 1549
Query: 750 catgagaaagtgaggagctcgatgttcttttgctga 785
|||||||||||||||||||| ||||| || ||||||
Sbjct: 1550 catgagaaagtgaggagctccatgtttttctgctga 1585
>dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H08, full
insert sequence
Length = 3385
Score = 341 bits (172), Expect = 5e-091
Identities = 612/756 (80%), Gaps = 2/756 (0%)
Strand = Plus / Plus
Query: 31 ttgctgctgttgttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtcc 90
||||||| || ||||| ||||| |||||||||| ||||| |||||||||||||| || |
Sbjct: 2283 ttgctgcggtggttagctctcgccaatggcctctcatctctaaatacagagcatcggtgc 2342
Query: 91 gcacccaatcaccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaag 150
||| || ||||| || | |||||||| || |||||||||||||| | | ||||||
Sbjct: 2343 acactcagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaag 2402
Query: 151 atgatggtctgatccgggagtgtctgattgacttctacaccagttctgggaagagaaagc 210
||||||| || || ||||| | ||||||||||||||||| |||||||| || | || |
Sbjct: 2403 atgatggcctcattcgggaatcgctgattgacttctacactagttctggaaaacggaaac 2462
Query: 211 ctgaccaagttatcatattcagggacggtgttagcgaaagtcagtttaatcaggtgctga 270
| || || |||||| | |||||||| || ||||| ||||| ||||||| |||||| | |
Sbjct: 2463 cggatcatgttatcgttttcagggatggagttagtgaaagccagtttactcaggtcatta 2522
Query: 271 acattgagttgcaacaaatcatcgaggcttgcaaatttcttgatgagaaatggaatccca 330
|||||||| | | || ||||| ||||| ||||||||||| |||||||| ||| || |
Sbjct: 2523 acattgagcttgatcagatcattgaggcatgcaaatttctcgatgagaagtggtcaccaa 2582
Query: 331 agttcacgttgattattgcccagaagaatcatcacactaaattttt-cattcctggaaag 389
||||||| ||||| |||| |||||||||||||| || |||||||| || || ||||
Sbjct: 2583 agttcacagtgattgttgctcagaagaatcatcataccaaattttttcagtc-tggatct 2641
Query: 390 ccagataatgtcccaccaggaactgtggtggacaacaaagtctgccatccaaagaacttc 449
||||||||||| || ||||| ||||| |||||||| |||| |||||||||| ||| |
Sbjct: 2642 ccagataatgttccgccaggtactgttgtggacaaacaagtgtgccatccaaggaattat 2701
Query: 450 gatttctacatgtgtgcgcatgctggaatgatcgggactacgaggccaactcactaccac 509
|| |||||||||||||| |||||||||||||| || || ||||||||||| || || ||
Sbjct: 2702 gacttctacatgtgtgctcatgctggaatgattggaacgacgaggccaacacattatcat 2761
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| || |||
Sbjct: 2762 gttctgcacgatgagataggtttctcccctgatgatctgcaggagctagtgcactcactc 2821
Query: 570 tcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgca 629
||||||||||| || || |||||||||||||||||||| |||||||| || ||||| ||
Sbjct: 2822 tcttatgtgtatcagagaagcacaacagccatatcagttgttgctccgatttgctatgcc 2881
Query: 630 catctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggagacgtcc 689
||||| || ||||||||||| ||| ||| | |||||||| || |||||||| ||||
Sbjct: 2882 catcttgctgctgctcaggtgggcacattcctcaagttcgaagatatgtcggacgcgtcg 2941
Query: 690 tccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgcgcctg 749
||||| || || || ||||| || | || || || ||||| | |||||||| |||||
Sbjct: 2942 tccagccaaggaggtcatacgtctgtcggaagtgtaccggtgcctgagctgcctcgcctc 3001
Query: 750 catgagaaagtgaggagctcgatgttcttttgctga 785
|||||||||||||||||||| ||||| || ||||||
Sbjct: 3002 catgagaaagtgaggagctccatgtttttctgctga 3037
>gb|CB646880.1|CB646880 OSJNEb09J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09J04 3', mRNA sequence
Length = 776
Score = 325 bits (164), Expect = 3e-086
Identities = 443/536 (82%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgagttgcaacaaatcatcgaggcttgcaaatttctt 311
||||||| |||||||||||||||||| || | ||||| || ||||| ||||| ||||||
Sbjct: 738 cagtttacccaggtgctgaacattgagctggatcaaataattgaggcatgcaagtttctt 679
Query: 312 gatgagaaatggaatcccaagttcacgttgattattgcccagaagaatcatcacactaaa 371
|| || || ||| ||| ||||| || ||||| |||| |||||||||||||| || |||
Sbjct: 678 gacgaaaactggtctccaaagtttacactgattgttgcacagaagaatcatcataccaaa 619
Query: 372 tttttcattcctggaaagccagataatgtcccaccaggaactgtggtggacaacaaagtc 431
||||| | |||||| | | |||| || || || || ||||| ||||||||| ||||
Sbjct: 618 ttttttgtgcctggatctcaaaataacgttcctcctggtactgttgtggacaacgcagtc 559
Query: 432 tgccatccaaagaacttcgatttctacatgtgtgcgcatgctggaatgatcgggactacg 491
|| ||||||| |||| || ||||||||||||||||| ||||||||||| || |||||
Sbjct: 558 tgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaatgattggaactaca 499
Query: 492 aggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctgcag 551
||||| || || || || ||||| |||||||||||||||||| | |||| ||||| |||
Sbjct: 498 aggcctacacattatcatatccttcatgatgagataggcttctctgctgacgatcttcag 439
Query: 552 gagctggtgcattcgctctcttatgtgtaccaaaggagcacaacagccatatcagtcgtt 611
||| |||| || || || || ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 438 gagttggtccactccctttcctatgtctaccagaggagcactacagccatatcagtcgtt 379
Query: 612 gctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttcgat 671
|| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||||
Sbjct: 378 gcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgac 319
Query: 672 gagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccggtc 731
||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||||
Sbjct: 318 gagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccggtg 259
Query: 732 caggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
| |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 258 cccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 203
>dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H03, full
insert sequence
Length = 772
Score = 325 bits (164), Expect = 3e-086
Identities = 443/536 (82%)
Strand = Plus / Plus
Query: 252 cagtttaatcaggtgctgaacattgagttgcaacaaatcatcgaggcttgcaaatttctt 311
||||||| |||||||||||||||||| || | ||||| || ||||| ||||| ||||||
Sbjct: 39 cagtttacccaggtgctgaacattgagctggatcaaataattgaggcatgcaagtttctt 98
Query: 312 gatgagaaatggaatcccaagttcacgttgattattgcccagaagaatcatcacactaaa 371
|| || || ||| ||| ||||| || ||||| |||| |||||||||||||| || |||
Sbjct: 99 gacgaaaactggtctccaaagtttacactgattgttgcacagaagaatcatcataccaaa 158
Query: 372 tttttcattcctggaaagccagataatgtcccaccaggaactgtggtggacaacaaagtc 431
||||| | |||||| | | |||| || || || || ||||| ||||||||| ||||
Sbjct: 159 ttttttgtgcctggatctcaaaataacgttcctcctggtactgttgtggacaacgcagtc 218
Query: 432 tgccatccaaagaacttcgatttctacatgtgtgcgcatgctggaatgatcgggactacg 491
|| ||||||| |||| || ||||||||||||||||| ||||||||||| || |||||
Sbjct: 219 tgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaatgattggaactaca 278
Query: 492 aggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctgcag 551
||||| || || || || ||||| |||||||||||||||||| | |||| ||||| |||
Sbjct: 279 aggcctacacattatcatatccttcatgatgagataggcttctctgctgacgatcttcag 338
Query: 552 gagctggtgcattcgctctcttatgtgtaccaaaggagcacaacagccatatcagtcgtt 611
||| |||| || || || || ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 339 gagttggtccactccctttcctatgtctaccagaggagcactacagccatatcagtcgtt 398
Query: 612 gctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttcgat 671
|| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||||
Sbjct: 399 gcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgac 458
Query: 672 gagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccggtc 731
||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||||
Sbjct: 459 gagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccggtg 518
Query: 732 caggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
| |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 519 cccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 574
>dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L10, full
insert sequence
Length = 3178
Score = 325 bits (164), Expect = 3e-086
Identities = 611/756 (80%), Gaps = 3/756 (0%)
Strand = Plus / Plus
Query: 31 ttgctgctgttgttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtcc 90
||||||| || ||||| ||||| |||||||||| ||||| |||||||||||||| || |
Sbjct: 2102 ttgctgcggtggttagctctcgccaatggcctctcatctctaaatacagagcatcggtgc 2161
Query: 91 gcacccaatcaccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaag 150
||| || ||||| || | |||||||| || |||||||||||||| | | ||||||
Sbjct: 2162 acactcagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaag 2221
Query: 151 atgatggtctgatccgggagtgtctgattgacttctacaccagttctgggaagagaaagc 210
||||||| || || ||||| | ||||||||||||||||| |||||||| || | || |
Sbjct: 2222 atgatggcctcattcgggaatcgctgattgacttctacactagttctggaaaacggaaac 2281
Query: 211 ctgaccaagttatcatattcagggacggtgttagcgaaagtcagtttaatcaggtgctga 270
| || || |||||| | || ||||| || ||||| ||||| ||||||| |||||| | |
Sbjct: 2282 cggatcatgttatcgtttt-agggatggagttagtgaaagccagtttactcaggtcatta 2340
Query: 271 acattgagttgcaacaaatcatcgaggcttgcaaatttcttgatgagaaatggaatccca 330
|||||||| | | || ||||| ||||| ||||||||||| |||||||| ||| || |
Sbjct: 2341 acattgagcttgatcagatcattgaggcatgcaaatttctcgatgagaagtggtcaccaa 2400
Query: 331 agttcacgttgattattgcccagaagaatcatcacactaaattttt-cattcctggaaag 389
||||||| ||||| |||| |||||||||||||| || |||||||| || || ||||
Sbjct: 2401 agttcacagtgattgttgctcagaagaatcatcataccaaattttttcagtc-tggatct 2459
Query: 390 ccagataatgtcccaccaggaactgtggtggacaacaaagtctgccatccaaagaacttc 449
||||||||||| || ||||| ||||| |||||||| |||| |||||||||| ||| |
Sbjct: 2460 ccagataatgttccgccaggtactgttgtggacaaacaagtgtgccatccaaggaattat 2519
Query: 450 gatttctacatgtgtgcgcatgctggaatgatcgggactacgaggccaactcactaccac 509
|| |||||||||||||| |||||||||||||| || || ||||||||||| || || ||
Sbjct: 2520 gacttctacatgtgtgctcatgctggaatgattggaacgacgaggccaacacattatcat 2579
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| || |||
Sbjct: 2580 gttctgcacgatgagataggtttctcccctgatgatctgcaggagctagtgcactcactc 2639
Query: 570 tcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgca 629
||||||||||| || || |||||||||||||||||||| |||||||| || ||||| ||
Sbjct: 2640 tcttatgtgtatcagagaagcacaacagccatatcagttgttgctccgatttgctatgcc 2699
Query: 630 catctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggagacgtcc 689
||||| || ||||||||||| ||| ||| | |||||||| || |||||||| ||||
Sbjct: 2700 catcttgctgctgctcaggtgggcacattcctcaagttcgaagatatgtcggacgcgtcg 2759
Query: 690 tccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgcgcctg 749
||||| || || || ||||| || | || || || ||||| | |||||||| |||||
Sbjct: 2760 tccagccaaggaggtcatacgtctgtcggaagtgtaccggtgcctgagctgcctcgcctc 2819
Query: 750 catgagaaagtgaggagctcgatgttcttttgctga 785
|||||||||||||||||||| ||||| || ||||||
Sbjct: 2820 catgagaaagtgaggagctccatgtttttctgctga 2855
>gb|CB646770.1|CB646770 OSJNEb09G16.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09G16 3', mRNA sequence
Length = 678
Score = 317 bits (160), Expect = 7e-084
Identities = 442/536 (82%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgagttgcaacaaatcatcgaggcttgcaaatttctt 311
||||||| |||||| ||||||||||| || | ||||| || ||||| ||||| ||||||
Sbjct: 657 cagtttacccaggtgttgaacattgagctggatcaaataattgaggcatgcaagtttctt 598
Query: 312 gatgagaaatggaatcccaagttcacgttgattattgcccagaagaatcatcacactaaa 371
|| || || ||| ||| ||||| || ||||| |||| |||||||||||||| || |||
Sbjct: 597 gacgaaaactggtctccaaagtttacactgattgttgcacagaagaatcatcataccaaa 538
Query: 372 tttttcattcctggaaagccagataatgtcccaccaggaactgtggtggacaacaaagtc 431
||||| | |||||| | | |||| || || || || ||||| ||||||||| ||||
Sbjct: 537 ttttttgtgcctggatctcaaaataacgttcctcctggtactgttgtggacaacgcagtc 478
Query: 432 tgccatccaaagaacttcgatttctacatgtgtgcgcatgctggaatgatcgggactacg 491
|| ||||||| |||| || ||||||||||||||||| ||||||||||| || |||||
Sbjct: 477 tgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaatgattggaactaca 418
Query: 492 aggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctgcag 551
||||| || || || || ||||| |||||||||||||||||| | |||| ||||| |||
Sbjct: 417 aggcctacacattatcatatccttcatgatgagataggcttctctgctgacgatcttcag 358
Query: 552 gagctggtgcattcgctctcttatgtgtaccaaaggagcacaacagccatatcagtcgtt 611
||| |||| || || || || ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 357 gagttggtccactccctttcctatgtctaccagaggagcactacagccatatcagtcgtt 298
Query: 612 gctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttcgat 671
|| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||||
Sbjct: 297 gcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgac 238
Query: 672 gagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccggtc 731
||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||||
Sbjct: 237 gagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccggtg 178
Query: 732 caggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
| |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 177 cccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 122
>gb|CA755466.1|CA755466 BR030021000_PLATE_B11_82_092.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030021000_PLATE_B11_82_092.ab1 similar to ESTs
AU068544(C30430),C98487(E0325),D23445(C2825),, mRNA
sequence
Length = 634
Score = 256 bits (129), Expect = 2e-065
Identities = 389/473 (82%), Gaps = 2/473 (0%)
Strand = Plus / Plus
Query: 174 ctgattgacttctacaccagttctgggaagagaaagcctgaccaagttatcatattcagg 233
||||||||||||||||| |||||||| || | || || || || |||||| | ||||||
Sbjct: 9 ctgattgacttctacactagttctggaaaacggaaaccggatcatgttatcgttttcagg 68
Query: 234 gacggtgttagcgaaagtcagtttaatcaggtgctgaacattgagttgcaacaaatcatc 293
|| || ||||| ||||| ||||||| |||||| | ||||||||| | | || |||||
Sbjct: 69 gatggagttagtgaaagccagtttactcaggtcattaacattgagcttgatcagatcatt 128
Query: 294 gaggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccag 353
||||| ||||||||||| |||||||| ||| || |||||||| ||||| |||| |||
Sbjct: 129 gaggcatgcaaatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcag 188
Query: 354 aagaatcatcacactaaattttt-cattcctggaaagccagataatgtcccaccaggaac 412
||||||||||| || |||||||| || || |||| ||||||||||| || ||||| ||
Sbjct: 189 aagaatcatcataccaaattttttcagtc-tggatctccagataatgttccgccaggtac 247
Query: 413 tgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcatgc 472
||| |||||||| |||| |||||||||| ||| | || |||||||||||||| |||||
Sbjct: 248 tgttgtggacaaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcatgc 307
Query: 473 tggaatgatcgggactacgaggccaactcactaccacatcctgcatgatgagataggctt 532
||||||||| || || ||||||||||| || || || | ||||| ||||||||||| ||
Sbjct: 308 tggaatgattggaacgacgaggccaacacattatcatgttctgcacgatgagataggttt 367
Query: 533 cagtcctgatgatctgcaggagctggtgcattcgctctcttatgtgtaccaaaggagcac 592
| |||||||||||||||||||| ||||| || |||||||||||||| || || |||||
Sbjct: 368 ctcccctgatgatctgcaggagctagtgcactcactctcttatgtgtatcagagaagcac 427
Query: 593 aacagccatatcagtcgttgctcccatctgctacgcacatctggcagctgctc 645
||||||||||||||| |||||||| || ||||| || ||||| || |||||||
Sbjct: 428 aacagccatatcagttgttgctccgatttgctatgcccatcttgctgctgctc 480
>gb|CB663613.1|CB663613 OSJNEd08M21.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08M21 3', mRNA sequence
Length = 814
Score = 240 bits (121), Expect = 1e-060
Identities = 375/457 (82%), Gaps = 2/457 (0%)
Strand = Plus / Minus
Query: 330 aagttcacgttgattattgcccagaagaatcatcacactaaattttt-cattcctggaaa 388
|||||||| ||||| |||| |||||||||||||| || |||||||| || || ||||
Sbjct: 804 aagttcacagtgattgttgctcagaagaatcatcataccaaattttttcagtc-tggatc 746
Query: 389 gccagataatgtcccaccaggaactgtggtggacaacaaagtctgccatccaaagaactt 448
||||||||||| || ||||| ||||| |||||||| |||| |||||||||| ||| |
Sbjct: 745 tccagataatgttccgccaggtactgttgtggacaaacaagtgtgccatccaaggaatta 686
Query: 449 cgatttctacatgtgtgcgcatgctggaatgatcgggactacgaggccaactcactacca 508
|| |||||||||||||| |||||||||||||| || || ||||||||||| || || ||
Sbjct: 685 tgacttctacatgtgtgctcatgctggaatgattggaacgacgaggccaacacattatca 626
Query: 509 catcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgct 568
| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| || ||
Sbjct: 625 tgttctgcacgatgagataggtttctcccctgatgatctgcaggagctagtgcactcact 566
Query: 569 ctcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgc 628
|||||||||||| || || |||||||||||||||||||| |||||||| || ||||| ||
Sbjct: 565 ctcttatgtgtatcagagaagcacaacagccatatcagttgttgctccgatttgctatgc 506
Query: 629 acatctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggagacgtc 688
||||| || ||||||||||| ||| ||| | |||||||| || |||||||| ||||
Sbjct: 505 ccatcttgctgctgctcaggtgggcacattcctcaagttcgaagatatgtcggacgcgtc 446
Query: 689 ctccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgcgcct 748
||||| || || || ||||| || | || || || ||||| | |||||||| |||||
Sbjct: 445 gtccagccaaggaggtcatacgtctgtcggaagtgtaccggtgcctgagctgcctcgcct 386
Query: 749 gcatgagaaagtgaggagctcgatgttcttttgctga 785
|||||||||||||||||||| ||||| || ||||||
Sbjct: 385 ccatgagaaagtgaggagctccatgtttttctgctga 349
>gb|CO435743.1|CO435743 OsMR809 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 689
Score = 220 bits (111), Expect = 1e-054
Identities = 235/278 (84%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| ||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 538 atccttcatgatgagataggcttntctgctgacgatcttcaggagttggtccactccctt 479
Query: 570 tcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgca 629
|| ||||| ||||| |||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 478 tcctatgtntaccagaggagcactacagccatatcagtcgttgcacccatttgctacgcg 419
Query: 630 catctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggagacgtcc 689
||||| || ||||||||||| |||||||||| ||||| || |||||||||||||||||
Sbjct: 418 catctcgctgctgctcaggtcagccagttcatcaagttngacgagatgtcggagacgtcg 359
Query: 690 tccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgcgcctg 749
|| || ||||| || ||||| ||||||||||||| |||||| | |||||||| ||||||
Sbjct: 358 tcgagccatggtggccatacctcggcgggcagcgctccggtgcccgagctgcctcgcctg 299
Query: 750 catgagaaagtgaggagctcgatgttcttttgctgagc 787
||| | ||||| |||||||| ||||| || ||||||||
Sbjct: 298 cataacaaagtcaggagctccatgttnttntgctgagc 261
>gb|AU181264.1|AU181264 AU181264 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C11152, mRNA sequence
Length = 446
Score = 210 bits (106), Expect = 1e-051
Identities = 214/250 (85%)
Strand = Plus / Plus
Query: 538 ctgatgatctgcaggagctggtgcattcgctctcttatgtgtaccaaaggagcacaacag 597
|||| ||||| |||||| |||| || || || || ||||| ||||| |||||||| ||||
Sbjct: 2 ctgacgatcttcaggagttggtccactccctttcctatgtctaccagaggagcactacag 61
Query: 598 ccatatcagtcgttgctcccatctgctacgcacatctggcagctgctcaggttggccagt 657
|||||||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 62 ccatatcagtcgttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagt 121
Query: 658 tcataaagttcgatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgg 717
|||| |||||||| ||||||||||||||||| || || ||||| || ||||| |||||||
Sbjct: 122 tcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgg 181
Query: 718 gcagcgttccggtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttct 777
|||||| |||||| | |||||||| ||||||||| | ||||| |||||||| |||||||
Sbjct: 182 gcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttct 241
Query: 778 tttgctgagc 787
| ||||||||
Sbjct: 242 tctgctgagc 251
>gb|C98487.1|C98487 C98487 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0325_6Z, mRNA sequence
Length = 552
Score = 182 bits (92), Expect = 3e-043
Identities = 175/203 (86%)
Strand = Plus / Plus
Query: 585 aggagcacaacagccatatcagtcgttgctcccatctgctacgcacatctggcagctgct 644
|||||||| |||||||||||||||||||| ||||| | ||||| ||||| || ||||||
Sbjct: 183 aggagcactacagccatatcagtcgttgcacccattttntacgcgcatctcgctgctgct 242
Query: 645 caggttggccagttcataaagttcgatgagatgtcggagacgtcctccagtcatggcggg 704
||||| |||||||||| |||||||| ||||||||||||||||| || || ||||| ||
Sbjct: 243 caggtcagccagttcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggc 302
Query: 705 catacttcggcgggcagcgttccggtccaggagctgccgcgcctgcatgagaaagtgagg 764
||||| ||||||||||||| |||||| | |||||||| ||||||||| | ||||| |||
Sbjct: 303 catacctcggcgggcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcagg 362
Query: 765 agctcgatgttcttttgctgagc 787
||||| |||||||| ||||||||
Sbjct: 363 agctccatgttcttctgctgagc 385
>gb|CF323377.1|CF323377 HDN--03-L03.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-L03, mRNA sequence
Length = 601
Score = 165 bits (83), Expect = 6e-038
Identities = 425/537 (79%), Gaps = 4/537 (0%)
Strand = Plus / Plus
Query: 1 gatctcctggacattctgatgtaccgtctgttgctgctgttgttagttctcgtgaatggc 60
|||| |||||||| |||||| |||| || ||||||| || |||||||||||||||||||
Sbjct: 58 gatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgtgaatggc 117
Query: 61 ctcttatctcgaaatacagagcatctgtccgcacccaatcaccaaaaatggaaatgattg 120
||||| | || |||||||| || || ||||| | || ||||| || | ||||||||||
Sbjct: 118 ctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaaatgattg 177
Query: 121 actcattgtttaagccacgggaagct---gaagatgatggtctgatccgggagtgtctga 177
| | | |||||||||| | |||| ||||||||||| || || ||||||| |
Sbjct: 178 atggactatttaagccacaaggagctcaggaagatgatggcctcattcgggagttattag 237
Query: 178 ttgacttctacaccagttctgggaagagaaagcctgaccaagttatcatattcagggacg 237
|||||||||| |||||| |||| || | |||||||| ||||| || || |||||||| |
Sbjct: 238 ttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttcagggatg 297
Query: 238 gtgttagcgaaagtcagtttaatcaggtgctgaacattgagttgcaacaaatcatcgagg 297
| || || || || ||||||| |||||||||||||||||| || | ||||| || ||||
Sbjct: 298 gggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaataattgagg 357
Query: 298 cttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccagaaga 357
| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| |||||||
Sbjct: 358 catgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacagaaga 417
Query: 358 atcatcacactaaatttttcattcctggaaagccagataatgtcccaccagg-aactgtg 416
||||||| || |||||||| | |||||| | | |||| || || || || | ||||
Sbjct: 418 atcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggtacctgtt 477
Query: 417 gtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcatgctgga 476
||||||||| |||||| ||||||| |||| || ||||||||||||||||| ||||||
Sbjct: 478 gtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcacgctgga 537
Query: 477 atgatcgggactacgaggccaactcactaccacatcctgcatgatgagataggcttc 533
||||| || ||||| ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 538 atgattggaactacaaggcctacacattatcatatccttcatgatgagataggcttc 594
>gb|AACV01000677.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000677, whole
genome shotgun sequence
Length = 43096
Score = 157 bits (79), Expect = 1e-035
Identities = 154/179 (86%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||
Sbjct: 9118 gttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttc 9059
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| ||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||
Sbjct: 9058 gacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccg 8999
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|| | |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 8998 gtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 8940
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| ||||||||| |||||| ||||||| |||| || |||||||||||||||||
Sbjct: 10076 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 10017
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 10016 gctggaatgat 10006
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 10959 gttagttctcgtgaatggcctcttgtatcaaaatacag 10922
Score = 46.1 bits (23), Expect = 0.038
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| |||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 9397 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctt 9338
Query: 570 tcttatgtgta 580
|| ||||||||
Sbjct: 9337 tcctatgtgta 9327
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 579 taccaaaggagcacaacagccatatcagtcg 609
||||| |||||||| ||||||||||||||||
Sbjct: 9240 taccagaggagcactacagccatatcagtcg 9210
Score = 44.1 bits (22), Expect = 0.15
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| ||||
Sbjct: 10281 aggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacaga 10222
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 10221 agaatcatcataccaaattttt 10200
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 157 bits (79), Expect = 1e-035
Identities = 154/179 (86%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||
Sbjct: 9628464 gttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttc 9628405
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| ||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||
Sbjct: 9628404 gacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccg 9628345
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|| | |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 9628344 gtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 9628286
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| ||||||||| |||||| ||||||| |||| || |||||||||||||||||
Sbjct: 9629422 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 9629363
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 9629362 gctggaatgat 9629352
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 9612326 cagtttaatcaggtgctgaacattgag 9612300
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 9630305 gttagttctcgtgaatggcctcttgtatcaaaatacag 9630268
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 9611870 gatttctacatgtgtgctcatgctgggatgat 9611839
Score = 46.1 bits (23), Expect = 0.038
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| |||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 9628743 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctt 9628684
Query: 570 tcttatgtgta 580
|| ||||||||
Sbjct: 9628683 tcctatgtgta 9628673
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 579 taccaaaggagcacaacagccatatcagtcg 609
||||| |||||||| ||||||||||||||||
Sbjct: 9628586 taccagaggagcactacagccatatcagtcg 9628556
Score = 44.1 bits (22), Expect = 0.15
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| ||||
Sbjct: 9629627 aggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacaga 9629568
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 9629567 agaatcatcataccaaattttt 9629546
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 157 bits (79), Expect = 1e-035
Identities = 154/179 (86%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||
Sbjct: 9628304 gttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttc 9628245
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| ||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||
Sbjct: 9628244 gacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccg 9628185
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|| | |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 9628184 gtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 9628126
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| ||||||||| |||||| ||||||| |||| || |||||||||||||||||
Sbjct: 9629262 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 9629203
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 9629202 gctggaatgat 9629192
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 9612166 cagtttaatcaggtgctgaacattgag 9612140
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 9630145 gttagttctcgtgaatggcctcttgtatcaaaatacag 9630108
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 9611710 gatttctacatgtgtgctcatgctgggatgat 9611679
Score = 46.1 bits (23), Expect = 0.038
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| |||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 9628583 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctt 9628524
Query: 570 tcttatgtgta 580
|| ||||||||
Sbjct: 9628523 tcctatgtgta 9628513
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 579 taccaaaggagcacaacagccatatcagtcg 609
||||| |||||||| ||||||||||||||||
Sbjct: 9628426 taccagaggagcactacagccatatcagtcg 9628396
Score = 44.1 bits (22), Expect = 0.15
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| ||||
Sbjct: 9629467 aggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacaga 9629408
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 9629407 agaatcatcataccaaattttt 9629386
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0038F12
Length = 190014
Score = 157 bits (79), Expect = 1e-035
Identities = 154/179 (86%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||
Sbjct: 68685 gttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttc 68626
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| ||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||
Sbjct: 68625 gacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccg 68566
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|| | |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 68565 gtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 68507
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| ||||||||| |||||| ||||||| |||| || |||||||||||||||||
Sbjct: 69643 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 69584
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 69583 gctggaatgat 69573
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 52547 cagtttaatcaggtgctgaacattgag 52521
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 70526 gttagttctcgtgaatggcctcttgtatcaaaatacag 70489
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 52091 gatttctacatgtgtgctcatgctgggatgat 52060
Score = 46.1 bits (23), Expect = 0.038
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| |||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 68964 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctt 68905
Query: 570 tcttatgtgta 580
|| ||||||||
Sbjct: 68904 tcctatgtgta 68894
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 579 taccaaaggagcacaacagccatatcagtcg 609
||||| |||||||| ||||||||||||||||
Sbjct: 68807 taccagaggagcactacagccatatcagtcg 68777
Score = 44.1 bits (22), Expect = 0.15
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| ||||
Sbjct: 69848 aggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacaga 69789
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 69788 agaatcatcataccaaattttt 69767
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 157 bits (79), Expect = 1e-035
Identities = 154/179 (86%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||
Sbjct: 9666374 gttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttc 9666315
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| ||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||
Sbjct: 9666314 gacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccg 9666255
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|| | |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 9666254 gtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 9666196
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| ||||||||| |||||| ||||||| |||| || |||||||||||||||||
Sbjct: 9667332 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 9667273
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 9667272 gctggaatgat 9667262
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 9649137 cagtttaatcaggtgctgaacattgag 9649111
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 9668215 gttagttctcgtgaatggcctcttgtatcaaaatacag 9668178
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 9648681 gatttctacatgtgtgctcatgctgggatgat 9648650
Score = 46.1 bits (23), Expect = 0.038
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| |||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 9666653 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctt 9666594
Query: 570 tcttatgtgta 580
|| ||||||||
Sbjct: 9666593 tcctatgtgta 9666583
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 579 taccaaaggagcacaacagccatatcagtcg 609
||||| |||||||| ||||||||||||||||
Sbjct: 9666496 taccagaggagcactacagccatatcagtcg 9666466
Score = 44.1 bits (22), Expect = 0.15
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| ||||
Sbjct: 9667537 aggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacaga 9667478
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 9667477 agaatcatcataccaaattttt 9667456
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 157 bits (79), Expect = 1e-035
Identities = 154/179 (86%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||
Sbjct: 9666374 gttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttc 9666315
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| ||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||
Sbjct: 9666314 gacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccg 9666255
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|| | |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 9666254 gtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 9666196
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| ||||||||| |||||| ||||||| |||| || |||||||||||||||||
Sbjct: 9667332 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 9667273
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 9667272 gctggaatgat 9667262
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 9649137 cagtttaatcaggtgctgaacattgag 9649111
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 9668215 gttagttctcgtgaatggcctcttgtatcaaaatacag 9668178
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 9648681 gatttctacatgtgtgctcatgctgggatgat 9648650
Score = 46.1 bits (23), Expect = 0.038
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| |||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 9666653 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctt 9666594
Query: 570 tcttatgtgta 580
|| ||||||||
Sbjct: 9666593 tcctatgtgta 9666583
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 579 taccaaaggagcacaacagccatatcagtcg 609
||||| |||||||| ||||||||||||||||
Sbjct: 9666496 taccagaggagcactacagccatatcagtcg 9666466
Score = 44.1 bits (22), Expect = 0.15
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| ||||
Sbjct: 9667537 aggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacaga 9667478
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 9667477 agaatcatcataccaaattttt 9667456
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 157 bits (79), Expect = 1e-035
Identities = 154/179 (86%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||||||
Sbjct: 9630682 gttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttc 9630623
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| ||||||||||||||||| || || ||||| || ||||| ||||||||||||| ||||
Sbjct: 9630622 gacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccg 9630563
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|| | |||||||| ||||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 9630562 gtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 9630504
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| ||||||||| |||||| ||||||| |||| || |||||||||||||||||
Sbjct: 9631640 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 9631581
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 9631580 gctggaatgat 9631570
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 9614544 cagtttaatcaggtgctgaacattgag 9614518
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 9632523 gttagttctcgtgaatggcctcttgtatcaaaatacag 9632486
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 9614088 gatttctacatgtgtgctcatgctgggatgat 9614057
Score = 46.1 bits (23), Expect = 0.038
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctc 569
||||| |||||||||||||||||| | |||| ||||| |||||| |||| || || ||
Sbjct: 9630961 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctt 9630902
Query: 570 tcttatgtgta 580
|| ||||||||
Sbjct: 9630901 tcctatgtgta 9630891
Score = 46.1 bits (23), Expect = 0.038
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 579 taccaaaggagcacaacagccatatcagtcg 609
||||| |||||||| ||||||||||||||||
Sbjct: 9630804 taccagaggagcactacagccatatcagtcg 9630774
Score = 44.1 bits (22), Expect = 0.15
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||| |||||||| || || ||| ||| ||||| || ||||| |||| ||||
Sbjct: 9631845 aggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacaga 9631786
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 9631785 agaatcatcataccaaattttt 9631764
>gb|D23328.1|D23328 RICC2623A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2623_1A, mRNA sequence
Length = 276
Score = 143 bits (72), Expect = 2e-031
Identities = 160/191 (83%)
Strand = Plus / Plus
Query: 459 atgtgtgcgcatgctggaatgatcgggactacgaggccaactcactaccacatcctgcat 518
|||||||| |||||||||||||| || || ||||||||||| || || || | |||||
Sbjct: 1 atgtgtgctcatgctggaatgattggaacgacgaggccaacacattatcatgttctgcac 60
Query: 519 gatgagataggcttcagtcctgatgatctgcaggagctggtgcattcgctctcttatgtg 578
||||||||||| || ||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 61 gatgagataggtttntnccctgatgatctgcaggagcnagtgcactcactctcttatgtg 120
Query: 579 taccaaaggagcacaacagccatatcagtcgttgctcccatctgctacgcacatctggca 638
|| || | |||||||||||||||||||| |||||||| || ||||| || ||||| ||
Sbjct: 121 tatcananaagcacaacagccatatcagttgttgctccgatttgctatgcccatcttgct 180
Query: 639 gctgctcaggt 649
|||||||||||
Sbjct: 181 gctgctcaggt 191
>gb|CV733900.1|CV733900 FLO--09-A09.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-A09,
mRNA sequence
Length = 404
Score = 141 bits (71), Expect = 9e-031
Identities = 140/163 (85%)
Strand = Plus / Plus
Query: 625 acgcacatctggcagctgctcaggttggccagttcataaagttcgatgagatgtcggaga 684
|||| ||||| || ||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 43 acgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgacgagatgtcggaga 102
Query: 685 cgtcctccagtcatggcgggcatacttcggcgggcagcgttccggtccaggagctgccgc 744
|||| || || ||||| || ||||| ||||||||||||| |||||| | |||||||| |
Sbjct: 103 cgtcgtcgagccatggtggccatacctcggcgggcagcgctccggtgcccgagctgcctc 162
Query: 745 gcctgcatgagaaagtgaggagctcgatgttcttttgctgagc 787
|||||||| | ||||| |||||||| |||||||| ||||||||
Sbjct: 163 gcctgcataacaaagtcaggagctccatgttcttctgctgagc 205
>gb|AU225181.1|AU225181 AU225181 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0114, mRNA sequence
Length = 365
Score = 125 bits (63), Expect = 5e-026
Identities = 117/135 (86%)
Strand = Plus / Minus
Query: 653 ccagttcataaagttcgatgagatgtcggagacgtcctccagtcatggcgggcatacttc 712
||||||||| |||||||| ||||||||||||||||| || || ||||| || ||||| ||
Sbjct: 320 ccagttcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacctc 261
Query: 713 ggcgggcagcgttccggtccaggagctgccgcgcctgcatgagaaagtgaggagctcgat 772
||||||||||| |||||| | |||||||| ||||||||| | ||||| |||||||| ||
Sbjct: 260 ggcgggcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctccat 201
Query: 773 gttcttttgctgagc 787
|||||| ||||||||
Sbjct: 200 gttcttctgctgagc 186
>gb|D23445.1|D23445 RICC2825A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2825_1A, mRNA sequence
Length = 275
Score = 73.8 bits (37), Expect = 2e-010
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 31 ttgctgctgttgttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtcc 90
||||||| || |||||||||||||||||||||||| | || |||||||| || || ||||
Sbjct: 10 ttgctgcggtcgttagttctcgtgaatggcctcttgtatcaaaatacagggcttcagtcc 69
Query: 91 gcacccaatcaccaaaaatggaaatgattgactcattgtttaagccacgggaagct---g 147
| | || ||||| || | ||||||||||| | | |||||||||| | |||| |
Sbjct: 70 gttctcagtcacctaagttagaaatgattgatggactatttaagccacaaggagctcagg 129
Query: 148 aagatgatggtctgatccgggagtgtctgattgacttctacaccagttctgggaagagaa 207
|||||||||| || || ||||||| | |||||||||| |||||| |||| || | |
Sbjct: 130 aagatgatggcctcattcgggagttattagttgacttctataccagtactggtaaacgta 189
Query: 208 agcctgaccaagttatcatattcagggacggtgttagcgaaagtcagtttaatcaggtgc 267
||||||| ||||| || || |||||||| || || || || || ||||||| |||||||
Sbjct: 190 agcctgatcaagtcattatcttcagggatggggtcagtgagagccagtttacccaggtgc 249
Query: 268 tgaacattgag 278
|||||||||||
Sbjct: 250 tgaacattgag 260
>gb|AU065539.1|AU065539 AU065539 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2824_1A, mRNA sequence
Length = 448
Score = 73.8 bits (37), Expect = 2e-010
Identities = 158/199 (79%)
Strand = Plus / Plus
Query: 178 ttgacttctacaccagttctgggaagagaaagcctgaccaagttatcatattcagggacg 237
|||||||||| |||||| |||| || | |||||||| ||||| || || |||||||| |
Sbjct: 168 ttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttcagggatg 227
Query: 238 gtgttagcgaaagtcagtttaatcaggtgctgaacattgagttgcaacaaatcatcgagg 297
| || || | || ||||||| |||||||||||||||||| || | ||||| || ||||
Sbjct: 228 gggtcagtnagagccagtttacccaggtgctgaacattgagctggatcaaataattgagg 287
Query: 298 cttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccagaaga 357
| ||||| |||||||| || || ||| | | ||||| || ||||| |||| |||| ||
Sbjct: 288 catgcaagtttcttgacgaaaactggtctncaaagtttacactgattgttgcacagagga 347
Query: 358 atcatcacactaaattttt 376
||||||| || ||||||||
Sbjct: 348 atcatcataccaaattttt 366
>gb|AACV01008615.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008615, whole
genome shotgun sequence
Length = 37475
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 489 acgaggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctg 548
||||||||||| || || || | ||||| ||||||||||| ||| ||||||||||||
Sbjct: 12098 acgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgatgatctg 12039
Query: 549 caggagctggtgcattcgctctcttatgtgta 580
|||||||| ||||| || ||||||||||||||
Sbjct: 12038 caggagctagtgcactcactctcttatgtgta 12007
Score = 65.9 bits (33), Expect = 4e-008
Identities = 141/177 (79%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
|||||||| || ||||| || ||||| || ||||||||||| ||| ||| | ||||||
Sbjct: 11798 gttgctccgatttgctatgcccatcttgctgctgctcaggtgggcacattcctcaagttc 11739
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| || |||||||| |||| ||||| || || || ||||| || | || || || |||
Sbjct: 11738 gaagatatgtcggacgcgtcgtccagccaaggaggtcatacgtctgtcggaagtgtaccg 11679
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctga 785
|| | |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 11678 gtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 11622
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| |||||||| |||| |||||||||| ||| | || |||||||||||||| |||
Sbjct: 12275 actgttgtggacaaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcat 12216
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 12215 gctggaatgat 12205
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||||||||| |||||||| ||| || |||||||| ||||| |||| ||||
Sbjct: 12491 aggcatgcaaatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcaga 12432
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 12431 agaatcatcataccaaattttt 12410
Score = 56.0 bits (28), Expect = 4e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtccgcacccaatca 101
||||| ||||| |||||||||| ||||| |||||||||||||| || | ||| || |||
Sbjct: 13211 gttagctctcgccaatggcctctcatctctaaatacagagcatcggtgcacactcagtca 13152
Query: 102 ccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaagatgatgg 157
|| || | |||||||| || |||||||||||||| | | |||||||||||||
Sbjct: 13151 cctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgatgg 13096
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 174 ctgattgacttctacaccagttctgg 199
||||||||||||||||| ||||||||
Sbjct: 12977 ctgattgacttctacactagttctgg 12952
>ref|NT_080056.2| Oryza sativa (japonica cultivar-group)
Length = 253647
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 489 acgaggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctg 548
||||||||||| || || || | ||||| ||||||||||| ||| ||||||||||||
Sbjct: 122252 acgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgatgatctg 122193
Query: 549 caggagctggtgcattcgctctcttatgtgta 580
|||||||| ||||| || ||||||||||||||
Sbjct: 122192 caggagctagtgcactcactctcttatgtgta 122161
Score = 65.9 bits (33), Expect = 4e-008
Identities = 141/177 (79%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
|||||||| || ||||| || ||||| || ||||||||||| ||| ||| | ||||||
Sbjct: 121952 gttgctccgatttgctatgcccatcttgctgctgctcaggtgggcacattcctcaagttc 121893
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| || |||||||| |||| ||||| || || || ||||| || | || || || |||
Sbjct: 121892 gaagatatgtcggacgcgtcgtccagccaaggaggtcatacgtctgtcggaagtgtaccg 121833
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctga 785
|| | |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 121832 gtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 121776
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| |||||||| |||| |||||||||| ||| | || |||||||||||||| |||
Sbjct: 122429 actgttgtggacaaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcat 122370
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 122369 gctggaatgat 122359
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||||||||| |||||||| ||| || |||||||| ||||| |||| ||||
Sbjct: 122645 aggcatgcaaatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcaga 122586
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 122585 agaatcatcataccaaattttt 122564
Score = 56.0 bits (28), Expect = 4e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtccgcacccaatca 101
||||| ||||| |||||||||| ||||| |||||||||||||| || | ||| || |||
Sbjct: 123365 gttagctctcgccaatggcctctcatctctaaatacagagcatcggtgcacactcagtca 123306
Query: 102 ccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaagatgatgg 157
|| || | |||||||| || |||||||||||||| | | |||||||||||||
Sbjct: 123305 cctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgatgg 123250
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 174 ctgattgacttctacaccagttctgg 199
||||||||||||||||| ||||||||
Sbjct: 123131 ctgattgacttctacactagttctgg 123106
>gb|CH401184.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000021 genomic
scaffold, whole genome shotgun sequence
Length = 2817894
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 489 acgaggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctg 548
||||||||||| || || || | ||||| ||||||||||| ||| ||||||||||||
Sbjct: 1472765 acgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgatgatctg 1472706
Query: 549 caggagctggtgcattcgctctcttatgtgta 580
|||||||| ||||| || ||||||||||||||
Sbjct: 1472705 caggagctagtgcactcactctcttatgtgta 1472674
Score = 65.9 bits (33), Expect = 4e-008
Identities = 141/177 (79%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
|||||||| || ||||| || ||||| || ||||||||||| ||| ||| | ||||||
Sbjct: 1472465 gttgctccgatttgctatgcccatcttgctgctgctcaggtgggcacattcctcaagttc 1472406
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| || |||||||| |||| ||||| || || || ||||| || | || || || |||
Sbjct: 1472405 gaagatatgtcggacgcgtcgtccagccaaggaggtcatacgtctgtcggaagtgtaccg 1472346
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctga 785
|| | |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 1472345 gtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 1472289
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| |||||||| |||| |||||||||| ||| | || |||||||||||||| |||
Sbjct: 1472942 actgttgtggacaaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcat 1472883
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 1472882 gctggaatgat 1472872
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||||||||| |||||||| ||| || |||||||| ||||| |||| ||||
Sbjct: 1473158 aggcatgcaaatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcaga 1473099
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 1473098 agaatcatcataccaaattttt 1473077
Score = 56.0 bits (28), Expect = 4e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtccgcacccaatca 101
||||| ||||| |||||||||| ||||| |||||||||||||| || | ||| || |||
Sbjct: 1473878 gttagctctcgccaatggcctctcatctctaaatacagagcatcggtgcacactcagtca 1473819
Query: 102 ccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaagatgatgg 157
|| || | |||||||| || |||||||||||||| | | |||||||||||||
Sbjct: 1473818 cctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgatgg 1473763
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 174 ctgattgacttctacaccagttctgg 199
||||||||||||||||| ||||||||
Sbjct: 1473644 ctgattgacttctacactagttctgg 1473619
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 489 acgaggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctg 548
||||||||||| || || || | ||||| ||||||||||| ||| ||||||||||||
Sbjct: 2958670 acgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgatgatctg 2958611
Query: 549 caggagctggtgcattcgctctcttatgtgta 580
|||||||| ||||| || ||||||||||||||
Sbjct: 2958610 caggagctagtgcactcactctcttatgtgta 2958579
Score = 65.9 bits (33), Expect = 4e-008
Identities = 141/177 (79%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
|||||||| || ||||| || ||||| || ||||||||||| ||| ||| | ||||||
Sbjct: 2958370 gttgctccgatttgctatgcccatcttgctgctgctcaggtgggcacattcctcaagttc 2958311
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| || |||||||| |||| ||||| || || || ||||| || | || || || |||
Sbjct: 2958310 gaagatatgtcggacgcgtcgtccagccaaggaggtcatacgtctgtcggaagtgtaccg 2958251
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctga 785
|| | |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 2958250 gtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 2958194
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| |||||||| |||| |||||||||| ||| | || |||||||||||||| |||
Sbjct: 2958847 actgttgtggacaaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcat 2958788
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 2958787 gctggaatgat 2958777
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||||||||| |||||||| ||| || |||||||| ||||| |||| ||||
Sbjct: 2959063 aggcatgcaaatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcaga 2959004
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 2959003 agaatcatcataccaaattttt 2958982
Score = 56.0 bits (28), Expect = 4e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtccgcacccaatca 101
||||| ||||| |||||||||| ||||| |||||||||||||| || | ||| || |||
Sbjct: 2959783 gttagctctcgccaatggcctctcatctctaaatacagagcatcggtgcacactcagtca 2959724
Query: 102 ccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaagatgatgg 157
|| || | |||||||| || |||||||||||||| | | |||||||||||||
Sbjct: 2959723 cctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgatgg 2959668
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 174 ctgattgacttctacaccagttctgg 199
||||||||||||||||| ||||||||
Sbjct: 2959549 ctgattgacttctacactagttctgg 2959524
>emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11,
complete sequence
Length = 127419
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 489 acgaggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctg 548
||||||||||| || || || | ||||| ||||||||||| ||| ||||||||||||
Sbjct: 122252 acgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgatgatctg 122193
Query: 549 caggagctggtgcattcgctctcttatgtgta 580
|||||||| ||||| || ||||||||||||||
Sbjct: 122192 caggagctagtgcactcactctcttatgtgta 122161
Score = 65.9 bits (33), Expect = 4e-008
Identities = 141/177 (79%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
|||||||| || ||||| || ||||| || ||||||||||| ||| ||| | ||||||
Sbjct: 121952 gttgctccgatttgctatgcccatcttgctgctgctcaggtgggcacattcctcaagttc 121893
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| || |||||||| |||| ||||| || || || ||||| || | || || || |||
Sbjct: 121892 gaagatatgtcggacgcgtcgtccagccaaggaggtcatacgtctgtcggaagtgtaccg 121833
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctga 785
|| | |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 121832 gtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 121776
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| |||||||| |||| |||||||||| ||| | || |||||||||||||| |||
Sbjct: 122429 actgttgtggacaaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcat 122370
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 122369 gctggaatgat 122359
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||||||||| |||||||| ||| || |||||||| ||||| |||| ||||
Sbjct: 122645 aggcatgcaaatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcaga 122586
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 122585 agaatcatcataccaaattttt 122564
Score = 56.0 bits (28), Expect = 4e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtccgcacccaatca 101
||||| ||||| |||||||||| ||||| |||||||||||||| || | ||| || |||
Sbjct: 123365 gttagctctcgccaatggcctctcatctctaaatacagagcatcggtgcacactcagtca 123306
Query: 102 ccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaagatgatgg 157
|| || | |||||||| || |||||||||||||| | | |||||||||||||
Sbjct: 123305 cctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgatgg 123250
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 174 ctgattgacttctacaccagttctgg 199
||||||||||||||||| ||||||||
Sbjct: 123131 ctgattgacttctacactagttctgg 123106
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 489 acgaggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctg 548
||||||||||| || || || | ||||| ||||||||||| ||| ||||||||||||
Sbjct: 3532957 acgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgatgatctg 3532898
Query: 549 caggagctggtgcattcgctctcttatgtgta 580
|||||||| ||||| || ||||||||||||||
Sbjct: 3532897 caggagctagtgcactcactctcttatgtgta 3532866
Score = 65.9 bits (33), Expect = 4e-008
Identities = 141/177 (79%)
Strand = Plus / Minus
Query: 609 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 668
|||||||| || ||||| || ||||| || ||||||||||| ||| ||| | ||||||
Sbjct: 3532657 gttgctccgatttgctatgcccatcttgctgctgctcaggtgggcacattcctcaagttc 3532598
Query: 669 gatgagatgtcggagacgtcctccagtcatggcgggcatacttcggcgggcagcgttccg 728
|| || |||||||| |||| ||||| || || || ||||| || | || || || |||
Sbjct: 3532597 gaagatatgtcggacgcgtcgtccagccaaggaggtcatacgtctgtcggaagtgtaccg 3532538
Query: 729 gtccaggagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctga 785
|| | |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 3532537 gtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 3532481
Score = 61.9 bits (31), Expect = 6e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 411 actgtggtggacaacaaagtctgccatccaaagaacttcgatttctacatgtgtgcgcat 470
||||| |||||||| |||| |||||||||| ||| | || |||||||||||||| |||
Sbjct: 3533134 actgttgtggacaaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcat 3533075
Query: 471 gctggaatgat 481
|||||||||||
Sbjct: 3533074 gctggaatgat 3533064
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 295 aggcttgcaaatttcttgatgagaaatggaatcccaagttcacgttgattattgcccaga 354
|||| ||||||||||| |||||||| ||| || |||||||| ||||| |||| ||||
Sbjct: 3533350 aggcatgcaaatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcaga 3533291
Query: 355 agaatcatcacactaaattttt 376
|||||||||| || ||||||||
Sbjct: 3533290 agaatcatcataccaaattttt 3533269
Score = 56.0 bits (28), Expect = 4e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtccgcacccaatca 101
||||| ||||| |||||||||| ||||| |||||||||||||| || | ||| || |||
Sbjct: 3534070 gttagctctcgccaatggcctctcatctctaaatacagagcatcggtgcacactcagtca 3534011
Query: 102 ccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaagatgatgg 157
|| || | |||||||| || |||||||||||||| | | |||||||||||||
Sbjct: 3534010 cctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgatgg 3533955
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 174 ctgattgacttctacaccagttctgg 199
||||||||||||||||| ||||||||
Sbjct: 3533836 ctgattgacttctacactagttctgg 3533811
>gb|CF325923.1|CF325923 JMT1--04-J16.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-J16, mRNA sequence
Length = 465
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 735 gagctgccgcgcctgcatgagaaagtgaggagctcgatgttcttttgctga 785
|||||||| ||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 424 gagctgcctcgcctccatgagaaagtgaggagctccatgtttttttgctga 374
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15,
complete sequence
Length = 130618
Score = 56.0 bits (28), Expect = 4e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatctgtccgcacccaatca 101
||||| ||||| |||||||||| ||||| |||||||||||||| || | ||| || |||
Sbjct: 336 gttagctctcgccaatggcctctcatctctaaatacagagcatcggtgcacactcagtca 277
Query: 102 ccaaaaatggaaatgattgactcattgtttaagccacgggaagctgaagatgatgg 157
|| || | |||||||| || |||||||||||||| | | |||||||||||||
Sbjct: 276 cctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgatgg 221
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 174 ctgattgacttctacaccagttctgg 199
||||||||||||||||| ||||||||
Sbjct: 102 ctgattgacttctacactagttctgg 77
>gb|AACV01000673.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000673, whole
genome shotgun sequence
Length = 39857
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 35466 cagtttaatcaggtgctgaacattgag 35440
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 35010 gatttctacatgtgtgctcatgctgggatgat 34979
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0424A08
Length = 151294
Score = 54.0 bits (27), Expect = 2e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 252 cagtttaatcaggtgctgaacattgag 278
|||||||||||||||||||||||||||
Sbjct: 147973 cagtttaatcaggtgctgaacattgag 147947
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 147517 gatttctacatgtgtgctcatgctgggatgat 147486
>gb|AQ689172.1|AQ689172 nbxb0079E19r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0079E19r, DNA sequence
Length = 694
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacag 79
|||||||||||||||||||||||| | || ||||||||
Sbjct: 327 gttagttctcgtgaatggcctcttgtatcaaaatacag 290
>gb|CF307494.1|CF307494 HDA1--06-N22.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-N22, mRNA sequence
Length = 644
Score = 50.1 bits (25), Expect = 0.002
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 gatctcctggacattctgatgtaccgtctgttgctgctgttgttagttctcgtgaat 57
|||| |||||||| |||||| |||| || ||||||| || ||||||||||||||||
Sbjct: 588 gatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgtgaat 644
>gb|AQ913186.1|AQ913186 nbeb0040D15f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0040D15f, DNA sequence
Length = 472
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 42 gttagttctcgtgaatggcctcttatctcgaaatacagagcatc 85
||||| ||||| |||||||||| ||||| ||||||||||||||
Sbjct: 375 gttagctctcgccaatggcctctcatctctaaatacagagcatc 332
>gb|AQ954566.1|AQ954566 nbeb0071M13r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0071M13r, DNA
sequence
Length = 376
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 450 gatttctacatgtgtgcgcatgctggaatgat 481
||||||||||||||||| |||||||| |||||
Sbjct: 55 gatttctacatgtgtgctcatgctgggatgat 24
>gb|CB674255.1|CB674255 OSJNEe09D12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09D12 3', mRNA sequence
Length = 824
Score = 46.1 bits (23), Expect = 0.038
Identities = 86/107 (80%)
Strand = Plus / Minus
Query: 564 tcgctctcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgc 623
||||| ||||||||||| || |||||||| || || ||||| || || || || |||||
Sbjct: 554 tcgctttcttatgtgtatcagaggagcaccactgcaatatctgttgtggcacctatctgt 495
Query: 624 tacgcacatctggcagctgctcaggttggccagttcataaagttcga 670
|| || ||||| ||||| || ||| | ||||||||||| || |||||
Sbjct: 494 tatgctcatctcgcagcagcgcagatgggccagttcatgaaattcga 448
>dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069G22, full
insert sequence
Length = 1211
Score = 46.1 bits (23), Expect = 0.038
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 564 tcgctctcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgc 623
||||| ||||||||||| || |||||||| || || ||||| || || || || |||||
Sbjct: 711 tcgctttcttatgtgtatcagaggagcaccactgcaatatctgttgtggcacctatctgt 770
Query: 624 tacgcacatctggcagctgctcaggttggccagttcataaagttcga 670
|| || ||||| ||||| || ||| | ||||||||||| || |||||
Sbjct: 771 tatgctcatctcgcagcagcgcagatgggccagttcatgaaattcga 817
>gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwille pinhead-like protein
(ZP1) mRNA, complete cds
Length = 1407
Score = 46.1 bits (23), Expect = 0.038
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 564 tcgctctcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgc 623
||||| ||||||||||| || |||||||| || || ||||| || || || || |||||
Sbjct: 885 tcgctttcttatgtgtatcagaggagcaccactgcaatatctgttgtggcacctatctgt 944
Query: 624 tacgcacatctggcagctgctcaggttggccagttcataaagttcga 670
|| || ||||| ||||| || ||| | ||||||||||| || |||||
Sbjct: 945 tatgctcatctcgcagcagcgcagatgggccagttcatgaaattcga 991
>ref|XM_477327.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2670
Score = 46.1 bits (23), Expect = 0.038
Identities = 86/107 (80%)
Strand = Plus / Plus
Query: 564 tcgctctcttatgtgtaccaaaggagcacaacagccatatcagtcgttgctcccatctgc 623
||||| ||||||||||| || |||||||| || || ||||| || || || || |||||
Sbjct: 2449 tcgctttcttatgtgtatcagaggagcaccactgcaatatctgttgtggcacctatctgt 2508
Query: 624 tacgcacatctggcagctgctcaggttggccagttcataaagttcga 670
|| || ||||| ||||| || ||| | ||||||||||| || |||||
Sbjct: 2509 tatgctcatctcgcagcagcgcagatgggccagttcatgaaattcga 2555
>gb|AQ256196.1|AQ256196 nbxb0015D14r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0015D14r, DNA sequence
Length = 612
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 510 atcctgcatgatgagataggcttcagtcctgatgatctgcaggagctggt 559
||||| |||||||||||||||||| | |||| ||||| |||||| ||||
Sbjct: 385 atccttcatgatgagataggcttctctgctgacgatcttcaggagttggt 434
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,361,908
Number of Sequences: 438736
Number of extensions: 1361908
Number of successful extensions: 7026
Number of sequences better than 0.5: 48
Number of HSP's better than 0.5 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6684
Number of HSP's gapped (non-prelim): 324
length of query: 1028
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1007
effective length of database: 2,791,206,460
effective search space: 2810744905220
effective search space used: 2810744905220
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)