BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.2
(1076 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA... 351 5e-094
dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA... 343 1e-091
ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Oz... 341 5e-091
dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA... 339 2e-090
gb|CB646880.1|CB646880 OSJNEb09J04.r OSJNEb Oryza sativa (j... 317 7e-084
gb|CB646770.1|CB646770 OSJNEb09G16.r OSJNEb Oryza sativa (j... 309 2e-081
dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA... 278 6e-072
dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA... 278 6e-072
dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA... 278 6e-072
dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA... 278 6e-072
dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA... 262 4e-067
gb|CA755466.1|CA755466 BR030021000_PLATE_B11_82_092.ab1 OA ... 224 8e-056
gb|AU181264.1|AU181264 AU181264 Rice callus (2001) Oryza sa... 178 4e-042
gb|CO435743.1|CO435743 OsMR809 5MT resistant rice mutant cD... 178 4e-042
gb|CB663613.1|CB663613 OSJNEd08M21.r OSJNEd Oryza sativa (j... 176 2e-041
gb|CF323377.1|CF323377 HDN--03-L03.g1 OsHDAC1-overexpressin... 176 2e-041
gb|C98487.1|C98487 C98487 Rice panicle at flowering stage O... 157 2e-035
gb|AACV01000677.1| Oryza sativa (japonica cultivar-group) c... 139 4e-030
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 139 4e-030
dbj|AP000836.1| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
gb|AU225181.1|AU225181 AU225181 Oryza sativa Koshihikari pi... 137 1e-029
gb|CV733900.1|CV733900 FLO--09-A09.b1 Rice flower lambda ph... 137 1e-029
gb|D23328.1|D23328 RICC2623A Rice callus Oryza sativa (japo... 127 1e-026
gb|AU065539.1|AU065539 AU065539 Rice callus Oryza sativa (j... 98 1e-017
gb|D23445.1|D23445 RICC2825A Rice callus Oryza sativa (japo... 82 7e-013
gb|AACV01008615.1| Oryza sativa (japonica cultivar-group) c... 70 3e-009
ref|NT_080056.2| Oryza sativa (japonica cultivar-group) 70 3e-009
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromoso... 70 3e-009
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
gb|AQ954566.1|AQ954566 nbeb0071M13r CUGI Rice BAC Library (... 66 4e-008
gb|AACV01000673.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
dbj|AP000837.1| Oryza sativa (japonica cultivar-group) geno... 66 4e-008
gb|CF325923.1|CF325923 JMT1--04-J16.g1 AtJMT-overexpressing... 62 7e-007
emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromoso... 58 1e-005
gb|CB674255.1|CB674255 OSJNEe09D12.r OSJNEe Oryza sativa (j... 56 4e-005
gb|CB677346.1|CB677346 OSJNEe14C23.f OSJNEe Oryza sativa (j... 56 4e-005
dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwill... 56 4e-005
dbj|AP006447.4| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
dbj|AP006465.4| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AACV01015684.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
ref|XM_477327.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 56 4e-005
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AQ913186.1|AQ913186 nbeb0040D15f CUGI Rice BAC Library (... 54 2e-004
gb|AQ689172.1|AQ689172 nbxb0079E19r CUGI Rice BAC Library O... 52 6e-004
gb|AU068544.1|AU068544 AU068544 Rice callus Oryza sativa (j... 52 6e-004
dbj|AP005727.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
dbj|AP005892.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
gb|AACV01019190.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 46 0.039
gb|CH401233.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 46 0.039
gb|AQ688726.1|AQ688726 nbxb0078O13f CUGI Rice BAC Library O... 44 0.16
gb|AC137607.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
ref|NT_107122.1| Oryza sativa (japonica cultivar-group) 44 0.16
gb|AC137609.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|AACV01011472.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01022953.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
ref|NT_107228.1| Oryza sativa (japonica cultivar-group) 44 0.16
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CH401198.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 44 0.16
gb|AC135561.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|AC145327.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
>dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E08, full
insert sequence
Length = 3047
Score = 351 bits (177), Expect = 5e-094
Identities = 504/613 (82%)
Strand = Plus / Minus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 2878 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 2819
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 2818 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 2759
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 2758 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 2699
Query: 469 acaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcc 528
|| |||||||||||||| |||||||| ||||| || || || || ||||| |||| ||||
Sbjct: 2698 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 2639
Query: 529 tgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggcctg 588
|| || || |||| | |||||||||||| ||||| ||||| ||||| || || |||||
Sbjct: 2638 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 2579
Query: 589 gtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacag 648
||||| |||||||||||||| || | |||||||||||| || ||||||||||||||||
Sbjct: 2578 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 2519
Query: 649 actttgttgtcaacaacagtgccagctggaacattatctggctttccaggaatgaaaaat 708
||| |||||| |||||||| |||| ||||| |||| | | |||||| | ||||||
Sbjct: 2518 actgcgttgtccacaacagtaccaggaggaacgttattttgagatccaggcacaaaaaat 2459
Query: 709 ttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctcatca 768
|| || || ||||||||||| |||| |||| ||| ||||| ||| ||| || || |||
Sbjct: 2458 ttggtatgatgattcttctgtgcaacaatcagtgtaaactttggagaccagttttcgtca 2399
Query: 769 agaaatttgcaagcctcaatgatttgttgcaactcaatgttcagcacctggttaaactga 828
||||| ||||| |||||||| ||||| | || ||||||||||||||||||| |||||||
Sbjct: 2398 agaaacttgcatgcctcaattatttgatccagctcaatgttcagcacctgggtaaactgg 2339
Query: 829 ctttcactaacaccgtccctgaagatgatgacttggtcaggctttctcttccctgaactg 888
|| ||||| || || ||||||||||| |||||||| |||||||| | || || | ||||
Sbjct: 2338 ctctcactgaccccatccctgaagataatgacttgatcaggcttacgtttaccagtactg 2279
Query: 889 gtgtagaagtcaa 901
|| ||||||||||
Sbjct: 2278 gtatagaagtcaa 2266
Score = 58.0 bits (29), Expect = 1e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaaccacagcagcaa 1048
|||||||| || | |||||||||||||||||||||||| || |||||||
Sbjct: 2164 ctgtattttgatacaagaggccattcacgagaactaacgaccgcagcaa 2116
>dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111L20, full
insert sequence
Length = 3027
Score = 343 bits (173), Expect = 1e-091
Identities = 503/613 (82%)
Strand = Plus / Minus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 2868 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 2809
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 2808 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 2749
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 2748 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 2689
Query: 469 acaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcc 528
|| |||||||||||||| |||||||| ||||| || || || || ||||| |||| ||||
Sbjct: 2688 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 2629
Query: 529 tgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggcctg 588
|| || || |||| | |||||||||||| ||||| ||||| ||||| || || |||||
Sbjct: 2628 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 2569
Query: 589 gtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacag 648
||||| |||||||||||||| || | |||||||||||| || ||||||||||||||||
Sbjct: 2568 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 2509
Query: 649 actttgttgtcaacaacagtgccagctggaacattatctggctttccaggaatgaaaaat 708
||| |||||| |||||||| |||| ||||| |||| | | |||||| | ||||||
Sbjct: 2508 actgcgttgtccacaacagtaccaggaggaacgttattttgagatccaggcacaaaaaat 2449
Query: 709 ttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctcatca 768
|| || || ||||||||||| |||| |||| ||| ||||| ||| ||| || || |||
Sbjct: 2448 ttggtatgatgattcttctgtgcaacaatcagtgtaaactttggagaccagttttcgtca 2389
Query: 769 agaaatttgcaagcctcaatgatttgttgcaactcaatgttcagcacctggttaaactga 828
||||| |||| |||||||| ||||| | || ||||||||||||||||||| |||||||
Sbjct: 2388 agaaacttgcctgcctcaattatttgatccagctcaatgttcagcacctgggtaaactgg 2329
Query: 829 ctttcactaacaccgtccctgaagatgatgacttggtcaggctttctcttccctgaactg 888
|| ||||| || || ||||||||||| |||||||| |||||||| | || || | ||||
Sbjct: 2328 ctctcactgaccccatccctgaagataatgacttgatcaggcttacgtttaccagtactg 2269
Query: 889 gtgtagaagtcaa 901
|| ||||||||||
Sbjct: 2268 gtatagaagtcaa 2256
Score = 58.0 bits (29), Expect = 1e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaaccacagcagcaa 1048
|||||||| || | |||||||||||||||||||||||| || |||||||
Sbjct: 2154 ctgtattttgatacaagaggccattcacgagaactaacgaccgcagcaa 2106
>ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa8518 predicted mRNA
Length = 2715
Score = 341 bits (172), Expect = 5e-091
Identities = 499/608 (82%)
Strand = Plus / Minus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctggacagg 353
|||||||||||||||||||||||| ||||| | |||||| || |||||||| | || ||
Sbjct: 2715 tcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcaccgg 2656
Query: 354 gacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcgtcgaa 413
||||||||||||||||||| || |||||||| || || ||||||||||||||||||||
Sbjct: 2655 agcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcgtcgaa 2596
Query: 414 ctttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagcaacaac 473
||| |||||||| | ||||| || || || || || |||||||| ||||| ||||| ||
Sbjct: 2595 cttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgcaacgac 2536
Query: 474 tgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcctgcag 533
|||||||||||| |||||||| ||||| || || || || ||||| |||| |||||| ||
Sbjct: 2535 tgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcctgaag 2476
Query: 534 gtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggcctggtagt 593
|| |||| | |||||||||||| ||||| ||||| ||||| || || ||||| |||||
Sbjct: 2475 atcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggccttgtagt 2416
Query: 594 cccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagacttt 653
|||||||||||||| || | |||||||||||| || |||||||||||||||||||
Sbjct: 2415 tccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgc 2356
Query: 654 gttgtcaacaacagtgccagctggaacattatctggctttccaggaatgaaaaatttagt 713
|||||| |||||||| |||| ||||| |||| | | |||||| | |||||||| ||
Sbjct: 2355 gttgtccacaacagtaccaggaggaacgttattttgagatccaggcacaaaaaatttggt 2296
Query: 714 gtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctcatcaagaaa 773
|| ||||||||||| |||| |||| ||| ||||| ||| ||| || || ||||||||
Sbjct: 2295 atgatgattcttctgtgcaacaatcagtgtaaactttggagaccagttttcgtcaagaaa 2236
Query: 774 tttgcaagcctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttc 833
||||| |||||||| ||||| | || ||||||||||||||||||| ||||||| || ||
Sbjct: 2235 cttgcatgcctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctc 2176
Query: 834 actaacaccgtccctgaagatgatgacttggtcaggctttctcttccctgaactggtgta 893
||| || || ||||||||||| |||||||| |||||||| | || || | |||||| ||
Sbjct: 2175 actgaccccatccctgaagataatgacttgatcaggcttacgtttaccagtactggtata 2116
Query: 894 gaagtcaa 901
||||||||
Sbjct: 2115 gaagtcaa 2108
Score = 58.0 bits (29), Expect = 1e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaaccacagcagcaa 1048
|||||||| || | |||||||||||||||||||||||| || |||||||
Sbjct: 2006 ctgtattttgatacaagaggccattcacgagaactaacgaccgcagcaa 1958
>dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H03, full
insert sequence
Length = 772
Score = 339 bits (171), Expect = 2e-090
Identities = 474/575 (82%)
Strand = Plus / Minus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 577 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 518
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 517 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 458
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 457 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 398
Query: 469 acaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcc 528
|| |||||||||||||| |||||||| ||||| || || || || ||||| |||| ||||
Sbjct: 397 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 338
Query: 529 tgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggcctg 588
|| || || |||| | |||||||||||| ||||| ||||| ||||| || || |||||
Sbjct: 337 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 278
Query: 589 gtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacag 648
||||| |||||||||||||| || | |||||||||||| || ||||||||||||||||
Sbjct: 277 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 218
Query: 649 actttgttgtcaacaacagtgccagctggaacattatctggctttccaggaatgaaaaat 708
||| |||||| |||||||| |||| ||||| |||| | | |||||| | ||||||
Sbjct: 217 actgcgttgtccacaacagtaccaggaggaacgttattttgagatccaggcacaaaaaat 158
Query: 709 ttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctcatca 768
|| || || ||||||||||| |||| |||| ||| ||||| ||| ||| || || |||
Sbjct: 157 ttggtatgatgattcttctgtgcaacaatcagtgtaaactttggagaccagttttcgtca 98
Query: 769 agaaatttgcaagcctcaatgatttgttgcaactcaatgttcagcacctggttaaactga 828
||||| ||||| |||||||| ||||| | || ||||||||||||||||||| |||||||
Sbjct: 97 agaaacttgcatgcctcaattatttgatccagctcaatgttcagcacctgggtaaactgg 38
Query: 829 ctttcactaacaccgtccctgaagatgatgacttg 863
|| ||||| || || ||||||||||| ||||||||
Sbjct: 37 ctctcactgaccccatccctgaagataatgacttg 3
>gb|CB646880.1|CB646880 OSJNEb09J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09J04 3', mRNA sequence
Length = 776
Score = 317 bits (160), Expect = 7e-084
Identities = 451/548 (82%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 200 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 259
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 260 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 319
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 320 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 379
Query: 469 acaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcc 528
|| |||||||||||||| |||||||| ||||| || || || || ||||| |||| ||||
Sbjct: 380 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 439
Query: 529 tgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggcctg 588
|| || || |||| | |||||||||||| ||||| ||||| ||||| || || |||||
Sbjct: 440 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 499
Query: 589 gtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacag 648
||||| |||||||||||||| || | |||||||||||| || ||||||||||||||||
Sbjct: 500 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 559
Query: 649 actttgttgtcaacaacagtgccagctggaacattatctggctttccaggaatgaaaaat 708
||| |||||| |||||||| |||| ||||| |||| | | |||||| | ||||||
Sbjct: 560 actgcgttgtccacaacagtaccaggaggaacgttattttgagatccaggcacaaaaaat 619
Query: 709 ttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctcatca 768
|| || || ||||||||||| |||| |||| ||| ||||| ||| ||| || || |||
Sbjct: 620 ttggtatgatgattcttctgtgcaacaatcagtgtaaactttggagaccagttttcgtca 679
Query: 769 agaaatttgcaagcctcaatgatttgttgcaactcaatgttcagcacctggttaaactga 828
||||| ||||| |||||||| ||||| | || ||||||||||||||||||| |||||||
Sbjct: 680 agaaacttgcatgcctcaattatttgatccagctcaatgttcagcacctgggtaaactgg 739
Query: 829 ctttcact 836
|| |||||
Sbjct: 740 ctctcact 747
>gb|CB646770.1|CB646770 OSJNEb09G16.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09G16 3', mRNA sequence
Length = 678
Score = 309 bits (156), Expect = 2e-081
Identities = 450/548 (82%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 119 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 178
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 179 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 238
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 239 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 298
Query: 469 acaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcc 528
|| |||||||||||||| |||||||| ||||| || || || || ||||| |||| ||||
Sbjct: 299 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 358
Query: 529 tgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggcctg 588
|| || || |||| | |||||||||||| ||||| ||||| ||||| || || |||||
Sbjct: 359 tgaagatcgtcagcagagaagcctatctcatcatgaaggatatgataatgtgtaggcctt 418
Query: 589 gtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacag 648
||||| |||||||||||||| || | |||||||||||| || ||||||||||||||||
Sbjct: 419 gtagttccaatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacag 478
Query: 649 actttgttgtcaacaacagtgccagctggaacattatctggctttccaggaatgaaaaat 708
||| |||||| |||||||| |||| ||||| |||| | | |||||| | ||||||
Sbjct: 479 actgcgttgtccacaacagtaccaggaggaacgttattttgagatccaggcacaaaaaat 538
Query: 709 ttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctcatca 768
|| || || ||||||||||| |||| |||| ||| ||||| ||| ||| || || |||
Sbjct: 539 ttggtatgatgattcttctgtgcaacaatcagtgtaaactttggagaccagttttcgtca 598
Query: 769 agaaatttgcaagcctcaatgatttgttgcaactcaatgttcagcacctggttaaactga 828
||||| ||||| |||||||| ||||| | || ||||||||||| ||||||| |||||||
Sbjct: 599 agaaacttgcatgcctcaattatttgatccagctcaatgttcaacacctgggtaaactgg 658
Query: 829 ctttcact 836
|| |||||
Sbjct: 659 ctctcact 666
>dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F07, full
insert sequence
Length = 1196
Score = 278 bits (140), Expect = 6e-072
Identities = 493/608 (81%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| || || |||
Sbjct: 748 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttctctgatac 689
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| ||||||||||| |||||||| ||| |||||||| ||
Sbjct: 688 acataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctcatcg 629
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatg 621
||||| | ||||| || |||||||| || || ||||||||||||||||| | |||||||
Sbjct: 628 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacatg 569
Query: 622 tagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaaca 681
||||| || | ||||||||||| || |||| ||||| |||||||| || | ||||||
Sbjct: 568 tagaagtcataattccttggatggcacacttgtttgtccacaacagtacctggcggaaca 509
Query: 682 ttatctggctttccaggaatg-aaaaatttagtgtggtgattcttctgggcaatgatcaa 740
|||||||| |||| || || |||||||| || || ||||||||||| |||| ||||
Sbjct: 508 ttatctggagatcca-gactgaaaaaatttggtatgatgattcttctgagcaacaatcac 450
Query: 741 tgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttgttgcaa 800
||||||||| || ||| |||||||| ||||||||||| ||||||||||| || | |
Sbjct: 449 tgtgaactttggtgaccacttctcatcgagaaatttgcatgcctcaatgatctgatcaag 390
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaacaccgtccctgaagatgatgac 860
||||||||| | ||||| ||||||| ||||||||||| || |||||||| | ||| ||
Sbjct: 389 ctcaatgttaatgacctgagtaaactggctttcactaactccatccctgaaaacgataac 330
Query: 861 ttggtcaggctttctcttccctgaactggtgtagaagtcaatcagacactcccgaatcag 920
|| || || || | || || ||||| ||||||||||||||||| | |||||||| ||
Sbjct: 329 atgatccggtttccgttttccagaactagtgtagaagtcaatcagcgattcccgaatgag 270
Query: 921 accatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccatttttggtga 980
||||| || |||||| | |||||||||||||| || |||||||| | || |||||
Sbjct: 269 gccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctagcttaggtga 210
Query: 981 ttgggtgcggacagatgctctgtatttcgagataagaggccattcacgagaactaaccac 1040
|| ||| | || |||||||||||||| ||||| |||||||||| ||||| ||||||||
Sbjct: 209 ctgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgagagctaaccac 150
Query: 1041 agcagcaa 1048
|||||||
Sbjct: 149 cgcagcaa 142
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 896 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 846
>dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H02, full
insert sequence
Length = 1196
Score = 278 bits (140), Expect = 6e-072
Identities = 493/608 (81%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| || || |||
Sbjct: 748 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttctctgatac 689
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| ||||||||||| |||||||| ||| |||||||| ||
Sbjct: 688 acataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctcatcg 629
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatg 621
||||| | ||||| || |||||||| || || ||||||||||||||||| | |||||||
Sbjct: 628 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacatg 569
Query: 622 tagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaaca 681
||||| || | ||||||||||| || |||| ||||| |||||||| || | ||||||
Sbjct: 568 tagaagtcataattccttggatggcacacttgtttgtccacaacagtacctggcggaaca 509
Query: 682 ttatctggctttccaggaatg-aaaaatttagtgtggtgattcttctgggcaatgatcaa 740
|||||||| |||| || || |||||||| || || ||||||||||| |||| ||||
Sbjct: 508 ttatctggagatcca-gactgaaaaaatttggtatgatgattcttctgagcaacaatcac 450
Query: 741 tgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttgttgcaa 800
||||||||| || ||| |||||||| ||||||||||| ||||||||||| || | |
Sbjct: 449 tgtgaactttggtgaccacttctcatcgagaaatttgcatgcctcaatgatctgatcaag 390
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaacaccgtccctgaagatgatgac 860
||||||||| | ||||| ||||||| ||||||||||| || |||||||| | ||| ||
Sbjct: 389 ctcaatgttaatgacctgagtaaactggctttcactaactccatccctgaaaacgataac 330
Query: 861 ttggtcaggctttctcttccctgaactggtgtagaagtcaatcagacactcccgaatcag 920
|| || || || | || || ||||| ||||||||||||||||| | |||||||| ||
Sbjct: 329 atgatccggtttccgttttccagaactagtgtagaagtcaatcagcgattcccgaatgag 270
Query: 921 accatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccatttttggtga 980
||||| || |||||| | |||||||||||||| || |||||||| | || |||||
Sbjct: 269 gccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctagcttaggtga 210
Query: 981 ttgggtgcggacagatgctctgtatttcgagataagaggccattcacgagaactaaccac 1040
|| ||| | || |||||||||||||| ||||| |||||||||| ||||| ||||||||
Sbjct: 209 ctgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgagagctaaccac 150
Query: 1041 agcagcaa 1048
|||||||
Sbjct: 149 cgcagcaa 142
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 896 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 846
>dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C06, full
insert sequence
Length = 1885
Score = 278 bits (140), Expect = 6e-072
Identities = 493/608 (81%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| || || |||
Sbjct: 1437 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttctctgatac 1378
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| ||||||||||| |||||||| ||| |||||||| ||
Sbjct: 1377 acataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctcatcg 1318
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatg 621
||||| | ||||| || |||||||| || || ||||||||||||||||| | |||||||
Sbjct: 1317 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacatg 1258
Query: 622 tagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaaca 681
||||| || | ||||||||||| || |||| ||||| |||||||| || | ||||||
Sbjct: 1257 tagaagtcataattccttggatggcacacttgtttgtccacaacagtacctggcggaaca 1198
Query: 682 ttatctggctttccaggaatg-aaaaatttagtgtggtgattcttctgggcaatgatcaa 740
|||||||| |||| || || |||||||| || || ||||||||||| |||| ||||
Sbjct: 1197 ttatctggagatcca-gactgaaaaaatttggtatgatgattcttctgagcaacaatcac 1139
Query: 741 tgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttgttgcaa 800
||||||||| || ||| |||||||| ||||||||||| ||||||||||| || | |
Sbjct: 1138 tgtgaactttggcgaccacttctcatcgagaaatttgcatgcctcaatgatctgatcaag 1079
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaacaccgtccctgaagatgatgac 860
||||||||| | ||||| ||||||| ||||||||||| || |||||||| | ||| ||
Sbjct: 1078 ctcaatgttaatgacctgagtaaactggctttcactaactccatccctgaaaacgataac 1019
Query: 861 ttggtcaggctttctcttccctgaactggtgtagaagtcaatcagacactcccgaatcag 920
|| || || || | || || ||||| ||||||||||||||||| | |||||||| ||
Sbjct: 1018 atgatccggtttccgttttccagaactagtgtagaagtcaatcagcgattcccgaatgag 959
Query: 921 accatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccatttttggtga 980
||||| || |||||| | |||||||||||||| || |||||||| | || |||||
Sbjct: 958 gccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctagcttaggtga 899
Query: 981 ttgggtgcggacagatgctctgtatttcgagataagaggccattcacgagaactaaccac 1040
|| ||| | || |||||||||||||| ||||| |||||||||| ||||| ||||||||
Sbjct: 898 ctgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgagagctaaccac 839
Query: 1041 agcagcaa 1048
|||||||
Sbjct: 838 cgcagcaa 831
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 1585 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 1535
>dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H08, full
insert sequence
Length = 3385
Score = 278 bits (140), Expect = 6e-072
Identities = 493/608 (81%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| || || |||
Sbjct: 2889 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttctctgatac 2830
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| ||||||||||| |||||||| ||| |||||||| ||
Sbjct: 2829 acataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctcatcg 2770
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatg 621
||||| | ||||| || |||||||| || || ||||||||||||||||| | |||||||
Sbjct: 2769 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacatg 2710
Query: 622 tagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaaca 681
||||| || | ||||||||||| || |||| ||||| |||||||| || | ||||||
Sbjct: 2709 tagaagtcataattccttggatggcacacttgtttgtccacaacagtacctggcggaaca 2650
Query: 682 ttatctggctttccaggaatg-aaaaatttagtgtggtgattcttctgggcaatgatcaa 740
|||||||| |||| || || |||||||| || || ||||||||||| |||| ||||
Sbjct: 2649 ttatctggagatcca-gactgaaaaaatttggtatgatgattcttctgagcaacaatcac 2591
Query: 741 tgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttgttgcaa 800
||||||||| || ||| |||||||| ||||||||||| ||||||||||| || | |
Sbjct: 2590 tgtgaactttggtgaccacttctcatcgagaaatttgcatgcctcaatgatctgatcaag 2531
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaacaccgtccctgaagatgatgac 860
||||||||| | ||||| ||||||| ||||||||||| || |||||||| | ||| ||
Sbjct: 2530 ctcaatgttaatgacctgagtaaactggctttcactaactccatccctgaaaacgataac 2471
Query: 861 ttggtcaggctttctcttccctgaactggtgtagaagtcaatcagacactcccgaatcag 920
|| || || || | || || ||||| ||||||||||||||||| | |||||||| ||
Sbjct: 2470 atgatccggtttccgttttccagaactagtgtagaagtcaatcagcgattcccgaatgag 2411
Query: 921 accatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccatttttggtga 980
||||| || |||||| | |||||||||||||| || |||||||| | || |||||
Sbjct: 2410 gccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctagcttaggtga 2351
Query: 981 ttgggtgcggacagatgctctgtatttcgagataagaggccattcacgagaactaaccac 1040
|| ||| | || |||||||||||||| ||||| |||||||||| ||||| ||||||||
Sbjct: 2350 ctgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgagagctaaccac 2291
Query: 1041 agcagcaa 1048
|||||||
Sbjct: 2290 cgcagcaa 2283
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 3037 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 2987
>dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L10, full
insert sequence
Length = 3178
Score = 262 bits (132), Expect = 4e-067
Identities = 492/608 (80%), Gaps = 3/608 (0%)
Strand = Plus / Minus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| || || |||
Sbjct: 2707 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttctctgatac 2648
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| ||||||||||| |||||||| ||| |||||||| ||
Sbjct: 2647 acataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctcatcg 2588
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatg 621
||||| | ||||| || |||||||| || || ||||||||||||||||| | |||||||
Sbjct: 2587 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacatg 2528
Query: 622 tagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaaca 681
||||| || | ||||||||||| || |||| ||||| |||||||| || | ||||||
Sbjct: 2527 tagaagtcataattccttggatggcacacttgtttgtccacaacagtacctggcggaaca 2468
Query: 682 ttatctggctttccaggaatg-aaaaatttagtgtggtgattcttctgggcaatgatcaa 740
|||||||| |||| || || |||||||| || || ||||||||||| |||| ||||
Sbjct: 2467 ttatctggagatcca-gactgaaaaaatttggtatgatgattcttctgagcaacaatcac 2409
Query: 741 tgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttgttgcaa 800
||||||||| || ||| |||||||| ||||||||||| ||||||||||| || | |
Sbjct: 2408 tgtgaactttggtgaccacttctcatcgagaaatttgcatgcctcaatgatctgatcaag 2349
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaacaccgtccctgaagatgatgac 860
||||||||| | ||||| ||||||| ||||||||||| || ||||| || | ||| ||
Sbjct: 2348 ctcaatgttaatgacctgagtaaactggctttcactaactccatccct-aaaacgataac 2290
Query: 861 ttggtcaggctttctcttccctgaactggtgtagaagtcaatcagacactcccgaatcag 920
|| || || || | || || ||||| ||||||||||||||||| | |||||||| ||
Sbjct: 2289 atgatccggtttccgttttccagaactagtgtagaagtcaatcagcgattcccgaatgag 2230
Query: 921 accatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccatttttggtga 980
||||| || |||||| | |||||||||||||| || |||||||| | || |||||
Sbjct: 2229 gccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctagcttaggtga 2170
Query: 981 ttgggtgcggacagatgctctgtatttcgagataagaggccattcacgagaactaaccac 1040
|| ||| | || |||||||||||||| ||||| |||||||||| ||||| ||||||||
Sbjct: 2169 ctgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgagagctaaccac 2110
Query: 1041 agcagcaa 1048
|||||||
Sbjct: 2109 cgcagcaa 2102
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 2855 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 2805
>gb|CA755466.1|CA755466 BR030021000_PLATE_B11_82_092.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030021000_PLATE_B11_82_092.ab1 similar to ESTs
AU068544(C30430),C98487(E0325),D23445(C2825),, mRNA
sequence
Length = 634
Score = 224 bits (113), Expect = 8e-056
Identities = 379/465 (81%), Gaps = 2/465 (0%)
Strand = Plus / Minus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| || || |||
Sbjct: 472 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttctctgatac 413
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| ||||||||||| |||||||| ||| |||||||| ||
Sbjct: 412 acataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctcatcg 353
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatg 621
||||| | ||||| || |||||||| || || ||||||||||||||||| | |||||||
Sbjct: 352 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacatg 293
Query: 622 tagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaaca 681
||||| || | ||||||||||| || |||| ||||| |||||||| || | ||||||
Sbjct: 292 tagaagtcataattccttggatggcacacttgtttgtccacaacagtacctggcggaaca 233
Query: 682 ttatctggctttccaggaatg-aaaaatttagtgtggtgattcttctgggcaatgatcaa 740
|||||||| |||| || || |||||||| || || ||||||||||| |||| ||||
Sbjct: 232 ttatctggagatcca-gactgaaaaaatttggtatgatgattcttctgagcaacaatcac 174
Query: 741 tgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttgttgcaa 800
||||||||| || ||| |||||||| ||||||||||| ||||||||||| || | |
Sbjct: 173 tgtgaactttggtgaccacttctcatcgagaaatttgcatgcctcaatgatctgatcaag 114
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaacaccgtccctgaagatgatgac 860
||||||||| | ||||| ||||||| ||||||||||| || |||||||| | ||| ||
Sbjct: 113 ctcaatgttaatgacctgagtaaactggctttcactaactccatccctgaaaacgataac 54
Query: 861 ttggtcaggctttctcttccctgaactggtgtagaagtcaatcag 905
|| || || || | || || ||||| |||||||||||||||||
Sbjct: 53 atgatccggtttccgttttccagaactagtgtagaagtcaatcag 9
Score = 46.1 bits (23), Expect = 0.039
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| | ||||||||||||||| |||||||| || || ||||||||
Sbjct: 619 tcagcagaaaaccatggagctcctcac-ttctcatggaggcgaggcagctc 570
>gb|AU181264.1|AU181264 AU181264 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C11152, mRNA sequence
Length = 446
Score = 178 bits (90), Expect = 4e-042
Identities = 204/242 (84%)
Strand = Plus / Minus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 254 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 195
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 194 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 135
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 134 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 75
Query: 469 acaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcc 528
|| |||||||||||||| |||||||| ||||| || || || || ||||| |||| ||||
Sbjct: 74 acgactgatatggctgtagtgctcctctggtagacataggaaagggagtggaccaactcc 15
Query: 529 tg 530
||
Sbjct: 14 tg 13
>gb|CO435743.1|CO435743 OsMR809 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 689
Score = 178 bits (90), Expect = 4e-042
Identities = 255/312 (81%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||| || |||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 258 gctgctcagcanaanaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 317
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 318 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 377
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|| ||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 378 tcnaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 437
Query: 469 acaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagctcc 528
|| |||||||||||||| |||||||| ||||| || || || || ||||| |||| ||||
Sbjct: 438 acgactgatatggctgtagtgctcctctggtanacataggaaagggagtggaccaactcc 497
Query: 529 tgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggcctg 588
|| || || |||| | ||||||||||| ||||| ||||| ||||| || || |||||
Sbjct: 498 tgaagatcgtcagcaganaagcctatctcatcatgaaggatatgataatgtgtaggcctt 557
Query: 589 gtagtcccaatc 600
||| | ||||||
Sbjct: 558 gtanttccaatc 569
>gb|CB663613.1|CB663613 OSJNEd08M21.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08M21 3', mRNA sequence
Length = 814
Score = 176 bits (89), Expect = 2e-041
Identities = 256/309 (82%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| || || |||
Sbjct: 497 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttctctgatac 556
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| ||||||||||| |||||||| ||| |||||||| ||
Sbjct: 557 acataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctcatcg 616
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatg 621
||||| | ||||| || |||||||| || || ||||||||||||||||| | |||||||
Sbjct: 617 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacatg 676
Query: 622 tagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaaca 681
||||| || | ||||||||||| || |||| ||||| |||||||| || | ||||||
Sbjct: 677 tagaagtcataattccttggatggcacacttgtttgtccacaacagtacctggcggaaca 736
Query: 682 ttatctggctttccaggaatg-aaaaatttagtgtggtgattcttctgggcaatgatcaa 740
|||||||| |||| || || |||||||| || || ||||||||||| |||| ||||
Sbjct: 737 ttatctggagatcca-gactgaaaaaatttggtatgatgattcttctgagcaacaatcac 795
Query: 741 tgtgaactt 749
|||||||||
Sbjct: 796 tgtgaactt 804
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 349 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 399
>gb|CF323377.1|CF323377 HDN--03-L03.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-L03, mRNA sequence
Length = 601
Score = 176 bits (89), Expect = 2e-041
Identities = 291/357 (81%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 546 gaagcctatctcgtcatgcaggatgtgatagtgagttggcctggtagtcccaatcattcc 605
|||||||||||| ||||| ||||| ||||| || || ||||| ||||| |||||||||||
Sbjct: 594 gaagcctatctcatcatgaaggatatgataatgtgtaggccttgtagttccaatcattcc 535
Query: 606 agcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgttgtcaacaac 665
||| || | |||||||||||| || ||||||||||||||||||| |||||| |||||
Sbjct: 534 agcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgttgtccacaac 475
Query: 666 ag-tgccagctggaacattatctggctttccaggaatgaaaaatttagtgtggtgattct 724
|| | |||| ||||| |||| | | |||||| | |||||||| || || |||||||
Sbjct: 474 aggtaccaggaggaacgttattttgagatccaggcacaaaaaatttggtatgatgattct 415
Query: 725 tctgggcaatgatcaatgtgaacttgggattccatttctcatcaagaaatttgcaagcct 784
|||| |||| |||| ||| ||||| ||| ||| || || |||||||| ||||| ||||
Sbjct: 414 tctgtgcaacaatcagtgtaaactttggagaccagttttcgtcaagaaacttgcatgcct 355
Query: 785 caatgatttgttgcaactcaatgttcagcacctggttaaactgactttcactaacaccgt 844
|||| ||||| | || ||||||||||||||||||| ||||||| || ||||| || || |
Sbjct: 354 caattatttgatccagctcaatgttcagcacctgggtaaactggctctcactgaccccat 295
Query: 845 ccctgaagatgatgacttggtcaggctttctcttccctgaactggtgtagaagtcaa 901
|||||||||| |||||||| |||||||| | || || | |||||| ||||||||||
Sbjct: 294 ccctgaagataatgacttgatcaggcttacgtttaccagtactggtatagaagtcaa 238
Score = 58.0 bits (29), Expect = 1e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaaccacagcagcaa 1048
|||||||| || | |||||||||||||||||||||||| || |||||||
Sbjct: 136 ctgtattttgatacaagaggccattcacgagaactaacgaccgcagcaa 88
>gb|C98487.1|C98487 C98487 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0325_6Z, mRNA sequence
Length = 552
Score = 157 bits (79), Expect = 2e-035
Identities = 174/206 (84%)
Strand = Plus / Minus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 388 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 329
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 328 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 269
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || ||||| | ||||| |||
Sbjct: 268 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtanaaaatgggtgca 209
Query: 469 acaactgatatggctgttgtgctcct 494
|| |||||||||||||| ||||||||
Sbjct: 208 acgactgatatggctgtagtgctcct 183
>gb|AACV01000677.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000677, whole
genome shotgun sequence
Length = 43096
Score = 139 bits (70), Expect = 4e-030
Identities = 154/182 (84%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 8937 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 8996
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 8997 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 9056
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 9057 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 9116
Query: 469 ac 470
||
Sbjct: 9117 ac 9118
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||||||||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 10004 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 10063
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 10064 tgtccacaacagt 10076
Score = 54.0 bits (27), Expect = 2e-004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 782 cctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttcact 836
||||||| ||||| | || ||||||||||||||||||| ||||||| || |||||
Sbjct: 10402 cctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctcact 10456
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaac 1037
|||||||| || | ||||||||||||||||||||||||
Sbjct: 10922 ctgtattttgatacaagaggccattcacgagaactaac 10959
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 139 bits (70), Expect = 4e-030
Identities = 154/182 (84%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 9628283 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 9628342
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 9628343 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 9628402
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 9628403 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 9628462
Query: 469 ac 470
||
Sbjct: 9628463 ac 9628464
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||||||||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 9629350 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 9629409
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 9629410 tgtccacaacagt 9629422
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 9611837 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 9611896
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 9611897 tgtcaacaacagt 9611909
Score = 54.0 bits (27), Expect = 2e-004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 782 cctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttcact 836
||||||| ||||| | || ||||||||||||||||||| ||||||| || |||||
Sbjct: 9629748 cctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctcact 9629802
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 9612300 ctcaatgttcagcacctgattaaactggccttcactaac 9612338
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaac 1037
|||||||| || | ||||||||||||||||||||||||
Sbjct: 9630268 ctgtattttgatacaagaggccattcacgagaactaac 9630305
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 139 bits (70), Expect = 4e-030
Identities = 154/182 (84%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 9628123 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 9628182
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 9628183 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 9628242
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 9628243 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 9628302
Query: 469 ac 470
||
Sbjct: 9628303 ac 9628304
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||||||||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 9629190 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 9629249
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 9629250 tgtccacaacagt 9629262
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 9611677 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 9611736
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 9611737 tgtcaacaacagt 9611749
Score = 54.0 bits (27), Expect = 2e-004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 782 cctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttcact 836
||||||| ||||| | || ||||||||||||||||||| ||||||| || |||||
Sbjct: 9629588 cctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctcact 9629642
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 9612140 ctcaatgttcagcacctgattaaactggccttcactaac 9612178
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaac 1037
|||||||| || | ||||||||||||||||||||||||
Sbjct: 9630108 ctgtattttgatacaagaggccattcacgagaactaac 9630145
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0038F12
Length = 190014
Score = 139 bits (70), Expect = 4e-030
Identities = 154/182 (84%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 68504 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 68563
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 68564 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 68623
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 68624 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 68683
Query: 469 ac 470
||
Sbjct: 68684 ac 68685
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||||||||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 69571 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 69630
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 69631 tgtccacaacagt 69643
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 52058 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 52117
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 52118 tgtcaacaacagt 52130
Score = 54.0 bits (27), Expect = 2e-004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 782 cctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttcact 836
||||||| ||||| | || ||||||||||||||||||| ||||||| || |||||
Sbjct: 69969 cctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctcact 70023
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 52521 ctcaatgttcagcacctgattaaactggccttcactaac 52559
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaac 1037
|||||||| || | ||||||||||||||||||||||||
Sbjct: 70489 ctgtattttgatacaagaggccattcacgagaactaac 70526
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 139 bits (70), Expect = 4e-030
Identities = 154/182 (84%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 9666193 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 9666252
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 9666253 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 9666312
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 9666313 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 9666372
Query: 469 ac 470
||
Sbjct: 9666373 ac 9666374
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||||||||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 9667260 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 9667319
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 9667320 tgtccacaacagt 9667332
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 9648648 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 9648707
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 9648708 tgtcaacaacagt 9648720
Score = 54.0 bits (27), Expect = 2e-004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 782 cctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttcact 836
||||||| ||||| | || ||||||||||||||||||| ||||||| || |||||
Sbjct: 9667658 cctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctcact 9667712
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 9649111 ctcaatgttcagcacctgattaaactggccttcactaac 9649149
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaac 1037
|||||||| || | ||||||||||||||||||||||||
Sbjct: 9668178 ctgtattttgatacaagaggccattcacgagaactaac 9668215
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 139 bits (70), Expect = 4e-030
Identities = 154/182 (84%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 9666193 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 9666252
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 9666253 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 9666312
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 9666313 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 9666372
Query: 469 ac 470
||
Sbjct: 9666373 ac 9666374
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||||||||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 9667260 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 9667319
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 9667320 tgtccacaacagt 9667332
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 9648648 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 9648707
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 9648708 tgtcaacaacagt 9648720
Score = 54.0 bits (27), Expect = 2e-004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 782 cctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttcact 836
||||||| ||||| | || ||||||||||||||||||| ||||||| || |||||
Sbjct: 9667658 cctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctcact 9667712
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 9649111 ctcaatgttcagcacctgattaaactggccttcactaac 9649149
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaac 1037
|||||||| || | ||||||||||||||||||||||||
Sbjct: 9668178 ctgtattttgatacaagaggccattcacgagaactaac 9668215
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 139 bits (70), Expect = 4e-030
Identities = 154/182 (84%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 9630501 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 9630560
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 9630561 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 9630620
Query: 409 tcgaactttatgaactgcccaacctgggcggctgcaaggtgggcgtagcagatgggagca 468
|||||||| |||||||| | ||||| || || || || || |||||||| ||||| |||
Sbjct: 9630621 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 9630680
Query: 469 ac 470
||
Sbjct: 9630681 ac 9630682
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||||||||| || | |||||||||||| || ||||||||||||||||||| ||
Sbjct: 9631568 caatcattccagcgtgcgcacacatgtagaagtcattgttccttggatgacagactgcgt 9631627
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 9631628 tgtccacaacagt 9631640
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 9614055 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 9614114
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 9614115 tgtcaacaacagt 9614127
Score = 54.0 bits (27), Expect = 2e-004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 782 cctcaatgatttgttgcaactcaatgttcagcacctggttaaactgactttcact 836
||||||| ||||| | || ||||||||||||||||||| ||||||| || |||||
Sbjct: 9631966 cctcaattatttgatccagctcaatgttcagcacctgggtaaactggctctcact 9632020
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 9614518 ctcaatgttcagcacctgattaaactggccttcactaac 9614556
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaac 1037
|||||||| || | ||||||||||||||||||||||||
Sbjct: 9632486 ctgtattttgatacaagaggccattcacgagaactaac 9632523
>gb|AU225181.1|AU225181 AU225181 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0114, mRNA sequence
Length = 365
Score = 137 bits (69), Expect = 1e-029
Identities = 120/137 (87%)
Strand = Plus / Plus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 183 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 242
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 243 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 302
Query: 409 tcgaactttatgaactg 425
|||||||| ||||||||
Sbjct: 303 tcgaacttgatgaactg 319
>gb|CV733900.1|CV733900 FLO--09-A09.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-A09,
mRNA sequence
Length = 404
Score = 137 bits (69), Expect = 1e-029
Identities = 120/137 (87%)
Strand = Plus / Minus
Query: 289 gctgctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctgg 348
||||||||||||||||||||||||||||| ||||| | |||||| || |||||||| |
Sbjct: 208 gctgctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggc 149
Query: 349 acagggacgctgcccgccgaggtatgccccccatggctagatgaagtctccgacatctcg 408
|| || ||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 148 accggagcgctgcccgccgaggtatggccaccatggctcgacgacgtctccgacatctcg 89
Query: 409 tcgaactttatgaactg 425
|||||||| ||||||||
Sbjct: 88 tcgaacttgatgaactg 72
>gb|D23328.1|D23328 RICC2623A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2623_1A, mRNA sequence
Length = 276
Score = 127 bits (64), Expect = 1e-026
Identities = 149/179 (83%)
Strand = Plus / Minus
Query: 442 gcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtac 501
||||| ||||| ||||| || ||||||||||||||||||||||||||||| | || |||
Sbjct: 179 gcaagatgggcatagcaaatcggagcaacaactgatatggctgttgtgcttntntgatac 120
Query: 502 acgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtca 561
|| |||||||| |||||||| |||||||||| |||||||| || |||||||| ||
Sbjct: 119 acataagagagtgagtgcactngctcctgcagatcatcagggnanaaacctatctcatcg 60
Query: 562 tgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacat 620
||||| | ||||| || |||||||| || || ||||||||||||||||| | ||||||
Sbjct: 59 tgcagaacatgataatgtgttggcctcgtcgttccaatcattccagcatgagcacacat 1
>gb|AU065539.1|AU065539 AU065539 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2824_1A, mRNA sequence
Length = 448
Score = 97.6 bits (49), Expect = 1e-017
Identities = 114/136 (83%)
Strand = Plus / Minus
Query: 766 tcaagaaatttgcaagcctcaatgatttgttgcaactcaatgttcagcacctggttaaac 825
|||||||| ||||| |||||||| ||||| | || ||||||||||||||||||| |||||
Sbjct: 303 tcaagaaacttgcatgcctcaattatttgatccagctcaatgttcagcacctgggtaaac 244
Query: 826 tgactttcactaacaccgtccctgaagatgatgacttggtcaggctttctcttccctgaa 885
|| || | ||| || || ||||||||||| |||||||| |||||||| | || || | |
Sbjct: 243 tggctctnactgaccccatccctgaagataatgacttgatcaggcttacgtttaccagta 184
Query: 886 ctggtgtagaagtcaa 901
||||| ||||||||||
Sbjct: 183 ctggtatagaagtcaa 168
>gb|D23445.1|D23445 RICC2825A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2825_1A, mRNA sequence
Length = 275
Score = 81.8 bits (41), Expect = 7e-013
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaacaccgtccctgaagatgatgac 860
||||||||||||||||||| ||||||| || ||||| || || ||||||||||| |||||
Sbjct: 260 ctcaatgttcagcacctgggtaaactggctctcactgaccccatccctgaagataatgac 201
Query: 861 ttggtcaggctttctcttccctgaactggtgtagaagtcaa 901
||| |||||||| | || || | |||||| ||||||||||
Sbjct: 200 ttgatcaggcttacgtttaccagtactggtatagaagtcaa 160
Score = 58.0 bits (29), Expect = 1e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1000 ctgtatttcgagataagaggccattcacgagaactaaccacagcagcaa 1048
|||||||| || | |||||||||||||||||||||||| || |||||||
Sbjct: 58 ctgtattttgatacaagaggccattcacgagaactaacgaccgcagcaa 10
>gb|AACV01008615.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008615, whole
genome shotgun sequence
Length = 37475
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 11622 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 11672
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 912 ccgaatcagaccatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccat 971
|||||| || ||||| || |||||| | |||||||||||||| || |||||||| |
Sbjct: 13086 ccgaatgaggccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctag 13145
Query: 972 ttttggtgattgggtgcggacagatgctctgtatttcgagataagaggccattcacgaga 1031
|| ||||| || ||| | || |||||||||||||| ||||| |||||||||| |||||
Sbjct: 13146 cttaggtgactgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgaga 13205
Query: 1032 actaaccac 1040
||||||||
Sbjct: 13206 gctaaccac 13214
Score = 58.0 bits (29), Expect = 1e-005
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||||||||| || | ||||||||||| || |||| |
Sbjct: 12203 caatcattccagcatgagcacacatgtagaagtcataattccttggatggcacacttgtt 12262
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 12263 tgtccacaacagt 12275
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
||||| |||||||| |||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct: 12007 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 12066
Query: 559 tcatgcaggatgtgatagtgagttggcct 587
|| ||||| | ||||| || ||||||||
Sbjct: 12067 tcgtgcagaacatgataatgtgttggcct 12095
Score = 52.0 bits (26), Expect = 6e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 703 aaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttc 762
|||||||| || || ||||||||||| |||| |||| ||||||||| || ||| |||
Sbjct: 12410 aaaaatttggtatgatgattcttctgagcaacaatcactgtgaactttggtgaccacttc 12469
Query: 763 tcatcaagaaatttgcaagcct 784
||||| ||||||||||| ||||
Sbjct: 12470 tcatcgagaaatttgcatgcct 12491
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 470 caactgatatggctgttgtgct 491
||||||||||||||||||||||
Sbjct: 11895 caactgatatggctgttgtgct 11916
>ref|NT_080056.2| Oryza sativa (japonica cultivar-group)
Length = 253647
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 121776 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 121826
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 912 ccgaatcagaccatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccat 971
|||||| || ||||| || |||||| | |||||||||||||| || |||||||| |
Sbjct: 123240 ccgaatgaggccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctag 123299
Query: 972 ttttggtgattgggtgcggacagatgctctgtatttcgagataagaggccattcacgaga 1031
|| ||||| || ||| | || |||||||||||||| ||||| |||||||||| |||||
Sbjct: 123300 cttaggtgactgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgaga 123359
Query: 1032 actaaccac 1040
||||||||
Sbjct: 123360 gctaaccac 123368
Score = 58.0 bits (29), Expect = 1e-005
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||||||||| || | ||||||||||| || |||| |
Sbjct: 122357 caatcattccagcatgagcacacatgtagaagtcataattccttggatggcacacttgtt 122416
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 122417 tgtccacaacagt 122429
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
||||| |||||||| |||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct: 122161 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 122220
Query: 559 tcatgcaggatgtgatagtgagttggcct 587
|| ||||| | ||||| || ||||||||
Sbjct: 122221 tcgtgcagaacatgataatgtgttggcct 122249
Score = 52.0 bits (26), Expect = 6e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 703 aaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttc 762
|||||||| || || ||||||||||| |||| |||| ||||||||| || ||| |||
Sbjct: 122564 aaaaatttggtatgatgattcttctgagcaacaatcactgtgaactttggtgaccacttc 122623
Query: 763 tcatcaagaaatttgcaagcct 784
||||| ||||||||||| ||||
Sbjct: 122624 tcatcgagaaatttgcatgcct 122645
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 470 caactgatatggctgttgtgct 491
||||||||||||||||||||||
Sbjct: 122049 caactgatatggctgttgtgct 122070
>gb|CH401184.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000021 genomic
scaffold, whole genome shotgun sequence
Length = 2817894
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 1472289 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 1472339
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 912 ccgaatcagaccatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccat 971
|||||| || ||||| || |||||| | |||||||||||||| || |||||||| |
Sbjct: 1473753 ccgaatgaggccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctag 1473812
Query: 972 ttttggtgattgggtgcggacagatgctctgtatttcgagataagaggccattcacgaga 1031
|| ||||| || ||| | || |||||||||||||| ||||| |||||||||| |||||
Sbjct: 1473813 cttaggtgactgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgaga 1473872
Query: 1032 actaaccac 1040
||||||||
Sbjct: 1473873 gctaaccac 1473881
Score = 58.0 bits (29), Expect = 1e-005
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||||||||| || | ||||||||||| || |||| |
Sbjct: 1472870 caatcattccagcatgagcacacatgtagaagtcataattccttggatggcacacttgtt 1472929
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 1472930 tgtccacaacagt 1472942
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
||||| |||||||| |||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct: 1472674 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 1472733
Query: 559 tcatgcaggatgtgatagtgagttggcct 587
|| ||||| | ||||| || ||||||||
Sbjct: 1472734 tcgtgcagaacatgataatgtgttggcct 1472762
Score = 52.0 bits (26), Expect = 6e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 703 aaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttc 762
|||||||| || || ||||||||||| |||| |||| ||||||||| || ||| |||
Sbjct: 1473077 aaaaatttggtatgatgattcttctgagcaacaatcactgtgaactttggtgaccacttc 1473136
Query: 763 tcatcaagaaatttgcaagcct 784
||||| ||||||||||| ||||
Sbjct: 1473137 tcatcgagaaatttgcatgcct 1473158
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 470 caactgatatggctgttgtgct 491
||||||||||||||||||||||
Sbjct: 1472562 caactgatatggctgttgtgct 1472583
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 2958194 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 2958244
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 912 ccgaatcagaccatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccat 971
|||||| || ||||| || |||||| | |||||||||||||| || |||||||| |
Sbjct: 2959658 ccgaatgaggccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctag 2959717
Query: 972 ttttggtgattgggtgcggacagatgctctgtatttcgagataagaggccattcacgaga 1031
|| ||||| || ||| | || |||||||||||||| ||||| |||||||||| |||||
Sbjct: 2959718 cttaggtgactgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgaga 2959777
Query: 1032 actaaccac 1040
||||||||
Sbjct: 2959778 gctaaccac 2959786
Score = 58.0 bits (29), Expect = 1e-005
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||||||||| || | ||||||||||| || |||| |
Sbjct: 2958775 caatcattccagcatgagcacacatgtagaagtcataattccttggatggcacacttgtt 2958834
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 2958835 tgtccacaacagt 2958847
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
||||| |||||||| |||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct: 2958579 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 2958638
Query: 559 tcatgcaggatgtgatagtgagttggcct 587
|| ||||| | ||||| || ||||||||
Sbjct: 2958639 tcgtgcagaacatgataatgtgttggcct 2958667
Score = 52.0 bits (26), Expect = 6e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 703 aaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttc 762
|||||||| || || ||||||||||| |||| |||| ||||||||| || ||| |||
Sbjct: 2958982 aaaaatttggtatgatgattcttctgagcaacaatcactgtgaactttggtgaccacttc 2959041
Query: 763 tcatcaagaaatttgcaagcct 784
||||| ||||||||||| ||||
Sbjct: 2959042 tcatcgagaaatttgcatgcct 2959063
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 470 caactgatatggctgttgtgct 491
||||||||||||||||||||||
Sbjct: 2958467 caactgatatggctgttgtgct 2958488
>emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11,
complete sequence
Length = 127419
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 121776 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 121826
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 912 ccgaatcagaccatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccat 971
|||||| || ||||| || |||||| | |||||||||||||| || |||||||| |
Sbjct: 123240 ccgaatgaggccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctag 123299
Query: 972 ttttggtgattgggtgcggacagatgctctgtatttcgagataagaggccattcacgaga 1031
|| ||||| || ||| | || |||||||||||||| ||||| |||||||||| |||||
Sbjct: 123300 cttaggtgactgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgaga 123359
Query: 1032 actaaccac 1040
||||||||
Sbjct: 123360 gctaaccac 123368
Score = 58.0 bits (29), Expect = 1e-005
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||||||||| || | ||||||||||| || |||| |
Sbjct: 122357 caatcattccagcatgagcacacatgtagaagtcataattccttggatggcacacttgtt 122416
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 122417 tgtccacaacagt 122429
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
||||| |||||||| |||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct: 122161 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 122220
Query: 559 tcatgcaggatgtgatagtgagttggcct 587
|| ||||| | ||||| || ||||||||
Sbjct: 122221 tcgtgcagaacatgataatgtgttggcct 122249
Score = 52.0 bits (26), Expect = 6e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 703 aaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttc 762
|||||||| || || ||||||||||| |||| |||| ||||||||| || ||| |||
Sbjct: 122564 aaaaatttggtatgatgattcttctgagcaacaatcactgtgaactttggtgaccacttc 122623
Query: 763 tcatcaagaaatttgcaagcct 784
||||| ||||||||||| ||||
Sbjct: 122624 tcatcgagaaatttgcatgcct 122645
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 470 caactgatatggctgttgtgct 491
||||||||||||||||||||||
Sbjct: 122049 caactgatatggctgttgtgct 122070
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 69.9 bits (35), Expect = 3e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 3532481 tcagcagaaaaacatggagctcctcactttctcatggaggcgaggcagctc 3532531
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 912 ccgaatcagaccatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccat 971
|||||| || ||||| || |||||| | |||||||||||||| || |||||||| |
Sbjct: 3533945 ccgaatgaggccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctag 3534004
Query: 972 ttttggtgattgggtgcggacagatgctctgtatttcgagataagaggccattcacgaga 1031
|| ||||| || ||| | || |||||||||||||| ||||| |||||||||| |||||
Sbjct: 3534005 cttaggtgactgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgaga 3534064
Query: 1032 actaaccac 1040
||||||||
Sbjct: 3534065 gctaaccac 3534073
Score = 58.0 bits (29), Expect = 1e-005
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||||||||| || | ||||||||||| || |||| |
Sbjct: 3533062 caatcattccagcatgagcacacatgtagaagtcataattccttggatggcacacttgtt 3533121
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 3533122 tgtccacaacagt 3533134
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
||||| |||||||| |||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct: 3532866 tacacataagagagtgagtgcactagctcctgcagatcatcaggggagaaacctatctca 3532925
Query: 559 tcatgcaggatgtgatagtgagttggcct 587
|| ||||| | ||||| || ||||||||
Sbjct: 3532926 tcgtgcagaacatgataatgtgttggcct 3532954
Score = 52.0 bits (26), Expect = 6e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 703 aaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttc 762
|||||||| || || ||||||||||| |||| |||| ||||||||| || ||| |||
Sbjct: 3533269 aaaaatttggtatgatgattcttctgagcaacaatcactgtgaactttggtgaccacttc 3533328
Query: 763 tcatcaagaaatttgcaagcct 784
||||| ||||||||||| ||||
Sbjct: 3533329 tcatcgagaaatttgcatgcct 3533350
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 470 caactgatatggctgttgtgct 491
||||||||||||||||||||||
Sbjct: 3532754 caactgatatggctgttgtgct 3532775
>gb|AQ954566.1|AQ954566 nbeb0071M13r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0071M13r, DNA
sequence
Length = 376
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 22 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 81
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 82 tgtcaacaacagt 94
>gb|AACV01000673.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000673, whole
genome shotgun sequence
Length = 39857
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 34977 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 35036
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 35037 tgtcaacaacagt 35049
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 35440 ctcaatgttcagcacctgattaaactggccttcactaac 35478
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0424A08
Length = 151294
Score = 65.9 bits (33), Expect = 4e-008
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
||||||| |||||||| | ||||||||||||||| ||||||| |||||||||| | |
Sbjct: 147484 caatcatcccagcatgagcacacatgtagaaatcacagttcctgggatgacagattcctt 147543
Query: 656 tgtcaacaacagt 668
|||||||||||||
Sbjct: 147544 tgtcaacaacagt 147556
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 801 ctcaatgttcagcacctggttaaactgactttcactaac 839
|||||||||||||||||| |||||||| | |||||||||
Sbjct: 147947 ctcaatgttcagcacctgattaaactggccttcactaac 147985
>gb|CF325923.1|CF325923 JMT1--04-J16.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-J16, mRNA sequence
Length = 465
Score = 61.9 bits (31), Expect = 7e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 294 tcagcagaagaacatggagctcctcactttctcatgcagacggggcagctc 344
|||||| || |||||||||||||||||||||||||| || || ||||||||
Sbjct: 374 tcagcaaaaaaacatggagctcctcactttctcatggaggcgaggcagctc 424
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15,
complete sequence
Length = 130618
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 912 ccgaatcagaccatcgtcatcagtttcccgtggcttaaacaacgagtcaatcatttccat 971
|||||| || ||||| || |||||| | |||||||||||||| || |||||||| |
Sbjct: 211 ccgaatgaggccatcatcttcagttcctcgtggcttaaacaaggaagacatcatttctag 270
Query: 972 ttttggtgattgggtgcggacagatgctctgtatttcgagataagaggccattcacgaga 1031
|| ||||| || ||| | || |||||||||||||| ||||| |||||||||| |||||
Sbjct: 271 cttaggtgactgagtgtgcaccgatgctctgtatttagagatgagaggccattggcgaga 330
Query: 1032 actaaccac 1040
||||||||
Sbjct: 331 gctaaccac 339
>gb|CB674255.1|CB674255 OSJNEe09D12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09D12 3', mRNA sequence
Length = 824
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 741 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 788
>gb|CB677346.1|CB677346 OSJNEe14C23.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe14C23 5', mRNA sequence
Length = 862
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 860 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 813
>dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069G22, full
insert sequence
Length = 1211
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 524 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 477
>gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwille pinhead-like protein
(ZP1) mRNA, complete cds
Length = 1407
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 698 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 651
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:B1100H02
Length = 128773
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 75804 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 75851
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:B1059D01
Length = 158792
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 1548 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 1595
>gb|AACV01015684.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015684, whole
genome shotgun sequence
Length = 18500
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 2682 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 2729
>ref|XM_477327.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2670
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 2262 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 2215
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 9449890 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 9449937
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058 genomic
scaffold, whole genome shotgun sequence
Length = 3500188
Score = 56.0 bits (28), Expect = 4e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 702 gaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaactt 749
||||| ||| |||||||||||||| || |||||||||| |||||||||
Sbjct: 3394780 gaaaagttttgtgtggtgattcttttgagcaatgatcactgtgaactt 3394827
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,358,201
Number of Sequences: 438736
Number of extensions: 1358201
Number of successful extensions: 6361
Number of sequences better than 0.5: 78
Number of HSP's better than 0.5 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5842
Number of HSP's gapped (non-prelim): 487
length of query: 1076
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1055
effective length of database: 2,791,206,460
effective search space: 2944722815300
effective search space used: 2944722815300
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)