BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276392.2.1
(644 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU165721.1|AU165721 AU165721 Rice panicle at flowering s... 452 e-124
dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA... 452 e-124
ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA 452 e-124
gb|AU064155.1|AU064155 AU064155 Rice panicle at flowering s... 446 e-123
gb|D16082.1|D16082 RICC2993A Rice callus Oryza sativa (japo... 430 e-118
gb|C93460.1|C93460 C93460 Rice callus Oryza sativa (japonic... 426 e-117
gb|AU094793.1|AU094793 AU094793 Rice panicle shorter than 3... 420 e-115
gb|AU172951.1|AU172951 AU172951 Rice immature leaf includin... 416 e-114
gb|AU108870.1|AU108870 AU108870 Rice callus Oryza sativa (j... 402 e-110
gb|D23601.1|D23601 RICC3071A Rice callus Oryza sativa (japo... 391 e-106
gb|AU064190.1|AU064190 AU064190 Rice panicle at flowering s... 377 e-102
gb|C91831.1|C91831 C91831 Rice panicle shorter than 3cm Ory... 369 1e-099
gb|C27355.1|C27355 C27355 Rice callus cDNA Oryza sativa (ja... 347 5e-093
gb|CV723239.1|CV723239 root--02-P04.g1 Rice root lambda pha... 331 3e-088
ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA 331 3e-088
gb|C91722.2|C91722 C91722 Rice panicle shorter than 3cm Ory... 325 2e-086
dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA... 323 7e-086
gb|C74023.1|C74023 C74023 Rice panicle shorter than 3cm Ory... 315 2e-083
gb|AU083366.1|AU083366 AU083366 Rice callus Oryza sativa (j... 307 4e-081
gb|CV731264.1|CV731264 FLO--05-D12.g1 Rice flower lambda ph... 274 6e-071
gb|AU164078.1|AU164078 AU164078 Rice panicle at ripening st... 236 1e-059
gb|CA999415.1|CA999415 S234H_C12 Rice cold stress germinati... 236 1e-059
gb|CF291395.1|CF291395 14ROOT--01-M21.b1 Rice root plasmid ... 236 1e-059
gb|CF300222.1|CF300222 7LEAF--04-I17.b1 Rice leaf plasmid c... 236 1e-059
gb|CF319098.1|CF319098 HD--09-H19.b1 OsHDAC1-overexpressing... 236 1e-059
gb|CF333612.1|CF333612 JMT--02-J08.b1 AtJMT-overexpressing ... 236 1e-059
gb|CV728925.1|CV728925 FLO--01-H24.b1 Rice flower lambda ph... 236 1e-059
gb|CV733133.1|CV733133 FLO--07-O16.b1 Rice flower lambda ph... 236 1e-059
gb|CV734019.1|CV734019 FLO--09-D06.b1 Rice flower lambda ph... 236 1e-059
gb|CV734250.1|CV734250 FLO--09-I12.b1 Rice flower lambda ph... 236 1e-059
gb|AU161742.1|AU161742 AU161742 Rice shoot Oryza sativa (ja... 232 2e-058
gb|CF291106.1|CF291106 14ROOT--01-G11.g1 Rice root plasmid ... 228 3e-057
gb|CF333503.1|CF333503 JMT--02-G21.g1 AtJMT-overexpressing ... 228 3e-057
gb|AU068726.1|AU068726 AU068726 Rice callus Oryza sativa (j... 224 5e-056
gb|AU068998.2|AU068998 AU068998 Rice callus Oryza sativa (j... 224 5e-056
gb|AU069919.1|AU069919 AU069919 Rice panicle (longer than 1... 222 2e-055
gb|CF298216.1|CF298216 7LEAF--01-I04.g1 Rice leaf plasmid c... 220 7e-055
gb|D38864.1|D38864 RICC1768A Rice callus Oryza sativa (japo... 218 3e-054
gb|AU069615.1|AU069615 AU069615 Rice callus Oryza sativa (j... 214 4e-053
gb|AU164079.1|AU164079 AU164079 Rice panicle at ripening st... 206 1e-050
gb|AU160893.1|AU160893 AU160893 Rice callus Oryza sativa (j... 204 4e-050
gb|AU160892.1|AU160892 AU160892 Rice callus Oryza sativa (j... 202 2e-049
gb|CF333502.1|CF333502 JMT--02-G21.b1 AtJMT-overexpressing ... 196 1e-047
gb|D38797.1|D38797 RICC0418A Rice callus Oryza sativa (japo... 180 6e-043
gb|CB683249.1|CB683249 OSJNEf11G05.f OSJNEf Oryza sativa (j... 180 6e-043
gb|D38960.2|D38960 RICC2984A Rice callus Oryza sativa (japo... 168 2e-039
gb|CF298215.1|CF298215 7LEAF--01-I04.b1 Rice leaf plasmid c... 165 4e-038
gb|CF319099.1|CF319099 HD--09-H19.g1 OsHDAC1-overexpressing... 165 4e-038
gb|CV731034.1|CV731034 FLO--04-O02.g1 Rice flower lambda ph... 163 1e-037
gb|D38966.1|D38966 RICC3087A Rice callus Oryza sativa (japo... 157 9e-036
gb|CV734251.1|CV734251 FLO--09-I12.g1 Rice flower lambda ph... 149 2e-033
gb|AU182828.1|AU182828 AU182828 Rice panicle shorter than 3... 137 8e-030
gb|CV731033.1|CV731033 FLO--04-O02.b1 Rice flower lambda ph... 137 8e-030
dbj|AP004460.2| Oryza sativa (japonica cultivar-group) geno... 129 2e-027
gb|AACV01017310.1| Oryza sativa (japonica cultivar-group) c... 129 2e-027
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 129 2e-027
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 129 2e-027
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 129 2e-027
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 129 2e-027
gb|AU029336.1|AU029336 AU029336 Rice panicle shorter than 3... 121 5e-025
gb|CF291396.1|CF291396 14ROOT--01-M21.g1 Rice root plasmid ... 121 5e-025
gb|CV728926.1|CV728926 FLO--01-H24.g1 Rice flower lambda ph... 117 8e-024
dbj|AP004567.1| Oryza sativa (japonica cultivar-group) chro... 109 2e-021
dbj|AP004700.1| Oryza sativa (japonica cultivar-group) chro... 109 2e-021
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 109 2e-021
gb|AACV01018549.1| Oryza sativa (japonica cultivar-group) c... 109 2e-021
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-021
gb|AQ578128.1|AQ578128 nbxb0083F02f CUGI Rice BAC Library O... 105 3e-020
gb|C74671.1|C74671 C74671 Rice cDNA from immature leaf incl... 94 1e-016
gb|CV729686.1|CV729686 FLO--02-N01.b1 Rice flower lambda ph... 90 2e-015
dbj|AK059470.1| Oryza sativa (japonica cultivar-group) cDNA... 90 2e-015
dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chro... 82 4e-013
dbj|AP005397.2| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
gb|AACV01019976.1| Oryza sativa (japonica cultivar-group) c... 82 4e-013
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 82 4e-013
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
gb|AU161743.1|AU161743 AU161743 Rice shoot Oryza sativa (ja... 72 4e-010
gb|CF300223.1|CF300223 7LEAF--04-I17.g1 Rice leaf plasmid c... 70 2e-009
gb|CF333613.1|CF333613 JMT--02-J08.g1 AtJMT-overexpressing ... 70 2e-009
gb|C28066.1|C28066 C28066 Rice callus cDNA Oryza sativa (ja... 66 3e-008
>gb|AU165721.1|AU165721 AU165721 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4194, mRNA sequence
Length = 572
Score = 452 bits (228), Expect = e-124
Identities = 315/344 (91%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 25 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 84
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 85 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 144
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 204
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 205 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 264
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 265 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 324
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 325 cagaagattgtgaagaaggtgttgaagatccagaagaccaagga 368
>dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K17, full
insert sequence
Length = 666
Score = 452 bits (228), Expect = e-124
Identities = 315/344 (91%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 73 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 132
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 133 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 192
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 252
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 253 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 312
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 313 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 372
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 373 cagaagattgtgaagaaggtgttgaagatccagaagaccaagga 416
>ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 666
Score = 452 bits (228), Expect = e-124
Identities = 315/344 (91%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 73 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 132
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 133 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 192
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 252
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 253 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 312
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 313 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 372
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 373 cagaagattgtgaagaaggtgttgaagatccagaagaccaagga 416
>gb|AU064155.1|AU064155 AU064155 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3982_1A, mRNA sequence
Length = 460
Score = 446 bits (225), Expect = e-123
Identities = 314/344 (91%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 26 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 85
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| ||||| |||||||||||||||||||| |||
Sbjct: 86 acccgcgtcgtcaagacccccggtgggaggcttgtntaccagtacaccaagaagcgggcg 145
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 205
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 206 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 265
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 266 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 325
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 326 cagaagattgtgaagaaggtgttgaagatccagaagaccaagga 369
>gb|D16082.1|D16082 RICC2993A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2993A, mRNA sequence
Length = 359
Score = 430 bits (217), Expect = e-118
Identities = 301/329 (91%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 31 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 90
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 91 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 150
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 210
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 211 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 270
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 271 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 330
Query: 359 cagaagatagtgaagaaggtgttgaagat 387
|||||||| ||||||||||||||||||||
Sbjct: 331 cagaagattgtgaagaaggtgttgaagat 359
>gb|C93460.1|C93460 C93460 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50722_1A, mRNA sequence
Length = 458
Score = 426 bits (215), Expect = e-117
Identities = 309/341 (90%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 62 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 121
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 122 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 181
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agcgtgccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 241
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 242 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 301
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || ||||||||||||| || |||||||| |||||
Sbjct: 302 ggtgtcctgtctggtactgcagtcagagagaggatcatccnggcttttttggtcgaggag 361
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaa 399
|||| ||| ||||||||||||||||||||||| ||||||||
Sbjct: 362 cagangattgtgaagaaggtgttgaagatccagaagaccaa 402
>gb|AU094793.1|AU094793 AU094793 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31680, mRNA sequence
Length = 713
Score = 420 bits (212), Expect = e-115
Identities = 313/344 (90%), Gaps = 2/344 (0%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 119 aagatggtgcagcggctgac-taccggaagcggcacag-tacgccacgaaatccaaccag 176
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 177 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 236
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 296
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 297 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 356
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 357 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 416
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 417 cagaagattgtgaagaaggtgttgaagatccagaagaccaagga 460
>gb|AU172951.1|AU172951 AU172951 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50379, mRNA sequence
Length = 447
Score = 416 bits (210), Expect = e-114
Identities = 314/346 (90%), Gaps = 2/346 (0%)
Strand = Plus / Plus
Query: 59 aagatggtgcagc-ggctcacctaccggaagcggcacagctacgccacc-aaatcgaacc 116
||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 28 aagatggtgcagcaggctgacctaccggaagcggcacagctacgccacagaaatccaacc 87
Query: 117 agacccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcg 176
||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |
Sbjct: 88 agacccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcggg 147
Query: 177 cgagcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagac 236
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cgagcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagac 207
Query: 237 ctgctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatg 296
|||||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || |
Sbjct: 208 ctgctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacg 267
Query: 297 gcggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgagg 356
| ||||| ||||||||||||||||| || |||||||||||||| | |||||||| ||||
Sbjct: 268 gtggtgtcctgtctggtactgcagtcagagagaggatcatccgggtttttttggtcgagg 327
Query: 357 aacagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 328 agcagaagattgtgaagaaggtgttgaagatccagaagaccaagga 373
>gb|AU108870.1|AU108870 AU108870 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51678, mRNA sequence
Length = 637
Score = 402 bits (203), Expect = e-110
Identities = 310/344 (90%), Gaps = 2/344 (0%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||
Sbjct: 31 aagatggtgcagcggctcacctaccggaagcggcacan-tacgccacgaaatccaacaag 89
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||| | || ||||||| ||||||| |||||||||||||||||| |||
Sbjct: 90 acccgcgtcgtcaagncccccggtgggaggcttgtgtnccagtacaccaagaagcgggcg 149
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 209
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||| | || ||
Sbjct: 210 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgt-cttacggt 268
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 269 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 328
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 329 cagaagattgtgaagaaggtgttgaagatccagaagaccaagga 372
>gb|D23601.1|D23601 RICC3071A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C3071_1A, mRNA sequence
Length = 341
Score = 391 bits (197), Expect = e-106
Identities = 280/308 (90%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 31 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 90
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 91 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 150
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 210
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 211 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 270
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| |||||| |||||||||| || |||||||||||||| || |||||||| |||||
Sbjct: 271 ggtgtcctgtctngtactgcagtcagagagaggatcatccgggcttttttggtcgaggag 330
Query: 359 cagaagat 366
||||||||
Sbjct: 331 cagaagat 338
>gb|AU064190.1|AU064190 AU064190 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4194_1A, mRNA sequence
Length = 350
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 26 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 85
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 86 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 145
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 205
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 206 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 265
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgccttttt 348
||||| ||||||||||||||||| || |||||||||||||| | ||||||
Sbjct: 266 ggtgtcctgtctggtactgcagtcagagagaggatcatccggggcttttt 315
>gb|C91831.1|C91831 C91831 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31680_1A, mRNA sequence
Length = 384
Score = 369 bits (186), Expect = 1e-099
Identities = 290/324 (89%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 61 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 120
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 121 acccgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcg 180
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 240
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| ||||||| | ||||| ||||| ||||| || ||
Sbjct: 241 gctgagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggt 300
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||| |||||| ||||| |||| || |||||||||||||| | ||||| || |||||
Sbjct: 301 ggtgtcctgtcttgtactncagtcagagagaggatcatccgggntttttttgtcgaggag 360
Query: 359 c-agaagatagtgaagaaggtgtt 381
| ||||||| |||||||||||||
Sbjct: 361 caagaagattttgaagaaggtgtt 384
>gb|C27355.1|C27355 C27355 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51678_1A, mRNA sequence
Length = 318
Score = 347 bits (175), Expect = 5e-093
Identities = 261/291 (89%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 28 aagatggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccag 87
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|||||| |||||||||| || ||||||| |||| |||||||||||||||||||| |||
Sbjct: 88 acccgcntcgtcaagacccccggtgggaggnttgtttaccagtacaccaagaagcgggcg 147
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 148 agcgggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctganacct 207
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||| ||| |||||| | ||||| ||||| ||||| || ||
Sbjct: 208 gctgagtacaagaggtccagattgtnaaggaatcgcaggaccgtgaaccgtccttacggt 267
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttg 349
||||| ||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 268 ggtgtcctgtctggtactgcagtcagagagaggatcatccgggcttttttg 318
>gb|CV723239.1|CV723239 root--02-P04.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-P04, mRNA sequence
Length = 447
Score = 331 bits (167), Expect = 3e-088
Identities = 281/319 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||
Sbjct: 66 agatggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccaga 125
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|| | ||||||||||| || ||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 126 ccagggtcgtcaagaccccaggtgggaggcttgtgtaccagtacacgaagaagagggcga 185
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| ||||||||||| |||||||||||||||||||| || ||||| ||| |||| ||||
Sbjct: 186 gcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctg 245
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 246 ctgagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 305
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| ||||||||||| || || ||||| ||||| |
Sbjct: 306 gagtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggagc 365
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 366 agaagattgtcaagaaggt 384
>ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 647
Score = 331 bits (167), Expect = 3e-088
Identities = 281/319 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||
Sbjct: 73 agatggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccaga 132
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|| | ||||||||||| || ||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 133 ccagggtcgtcaagaccccaggtgggaggcttgtgtaccagtacacgaagaagagggcga 192
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| ||||||||||| |||||||||||||||||||| || ||||| ||| |||| ||||
Sbjct: 193 gcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctg 252
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 253 ctgagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 312
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| ||||||||||| || || ||||| ||||| |
Sbjct: 313 gagtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggagc 372
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 373 agaagattgtcaagaaggt 391
>gb|C91722.2|C91722 C91722 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31421_1A, mRNA sequence
Length = 449
Score = 325 bits (164), Expect = 2e-086
Identities = 282/320 (88%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||
Sbjct: 46 agatggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccaga 105
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|| | ||||||||||| || ||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 106 ccagggtcgtcaagaccccaggtgggaggcttgtgtaccagtacacgaagaagagggcga 165
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| ||||||||||| |||||||||||||||||||| || ||||| ||| |||| ||||
Sbjct: 166 gcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctg 225
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 226 ctgagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 285
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctt-tttggttgaggaa 358
| || || ||||| |||||||||||||| ||||||||||| || || |||||| |||||
Sbjct: 286 gagtgctctctggaactgcagttagggaaaggatcatccgtgctttctttggtcgaggag 345
Query: 359 cagaagatagtgaagaaggt 378
|||||||| || ||||||||
Sbjct: 346 cagaagattgtcaagaaggt 365
>dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G01, full
insert sequence
Length = 647
Score = 323 bits (163), Expect = 7e-086
Identities = 280/319 (87%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||
Sbjct: 73 agatggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccaga 132
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|| | |||||||||| || ||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 133 ccagggtcgtcaagatcccaggtgggaggcttgtgtaccagtacacgaagaagagggcga 192
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| ||||||||||| |||||||||||||||||||| || ||||| ||| |||| ||||
Sbjct: 193 gcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctg 252
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 253 ctgagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 312
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| ||||||||||| || || ||||| ||||| |
Sbjct: 313 gagtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggagc 372
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 373 agaagattgtcaagaaggt 391
>gb|C74023.1|C74023 C74023 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30175_1A, mRNA sequence
Length = 437
Score = 315 bits (159), Expect = 2e-083
Identities = 280/319 (87%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||
Sbjct: 58 agatggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccaga 117
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|| | ||||||||||| || ||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 118 ccagggtcgtcaagaccccaggtgggaggcttgtgtaccagtacacgaagaagagggcga 177
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| ||||||||||| |||||||||||||||||||| || ||||| ||| |||| ||||
Sbjct: 178 gcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctg 237
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||||||| | ||||||| | ||||||||| ||||||||||| |
Sbjct: 238 ctgagtacaagaggtccaggttgtctaggaaccgca-gactgtgaaccgtccatatggtg 296
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| ||||||||||| || || ||||| ||||| |
Sbjct: 297 gagtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggagc 356
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 357 agaagattgtcaagaaggt 375
>gb|AU083366.1|AU083366 AU083366 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C40045, mRNA sequence
Length = 390
Score = 307 bits (155), Expect = 4e-081
Identities = 279/319 (87%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||
Sbjct: 50 agatggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccaga 109
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|| | ||||||||||| || ||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 110 ccagggtcgtcaagaccccaggtgggaggcttgtgtaccagtacacgaagaagagggcga 169
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| ||||||||||| |||||||||||||||||||| || ||||| ||| |||| ||||
Sbjct: 170 gcgggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctg 229
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 230 ctgagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 289
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||| ||||||| ||||||||||| || || ||||| || || |
Sbjct: 290 gagtgctctctggaactgca-ttagggaaaggatcatccgtgctttcttggtcgaagagc 348
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 349 agaagattgtcaagaaggt 367
>gb|CV731264.1|CV731264 FLO--05-D12.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-D12,
mRNA sequence
Length = 466
Score = 274 bits (138), Expect = 6e-071
Identities = 198/218 (90%)
Strand = Plus / Minus
Query: 185 ccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgag 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgag 403
Query: 245 tacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgtt 304
|||||||||||||| ||| ||||||| | ||||| ||||| ||||| || || |||||
Sbjct: 402 tacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggtggtgtc 343
Query: 305 ctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaag 364
||||||||||||||||| || |||||||||||||| || |||||||| ||||| ||||||
Sbjct: 342 ctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggagcagaag 283
Query: 365 atagtgaagaaggtgttgaagatccaaaagaccaagga 402
|| ||||||||||||||||||||||| |||||||||||
Sbjct: 282 attgtgaagaaggtgttgaagatccagaagaccaagga 245
>gb|AU164078.1|AU164078 AU164078 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12162, mRNA sequence
Length = 443
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 71 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 130
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 131 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 190
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 191 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 250
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 251 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 310
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 311 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 370
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 371 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 413
>gb|CA999415.1|CA999415 S234H_C12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 609
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 41 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 100
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 101 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 160
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 161 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 220
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 221 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 280
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 281 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 340
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 341 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 383
>gb|CF291395.1|CF291395 14ROOT--01-M21.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-M21, mRNA sequence
Length = 540
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 100 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 159
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 160 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 219
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 220 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 279
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 280 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 339
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 340 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 399
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 400 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 442
>gb|CF300222.1|CF300222 7LEAF--04-I17.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--04-I17, mRNA sequence
Length = 591
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 102 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 161
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 162 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 221
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 222 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 281
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 282 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 341
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 342 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 401
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 402 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 444
>gb|CF319098.1|CF319098 HD--09-H19.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-H19, mRNA sequence
Length = 606
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 85 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 144
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 145 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 204
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 205 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 264
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 265 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 324
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 325 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 384
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 385 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 427
>gb|CF333612.1|CF333612 JMT--02-J08.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-J08, mRNA sequence
Length = 593
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 87 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 146
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 147 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 206
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 207 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 266
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 267 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 326
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 327 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 386
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 387 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 429
>gb|CV728925.1|CV728925 FLO--01-H24.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-H24,
mRNA sequence
Length = 503
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 84 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 143
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 144 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 203
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 204 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 263
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 264 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 323
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 324 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 383
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 384 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 426
>gb|CV733133.1|CV733133 FLO--07-O16.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-O16,
mRNA sequence
Length = 503
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 84 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 143
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 144 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 203
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 204 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 263
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 264 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 323
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 324 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 383
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 384 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 426
>gb|CV734019.1|CV734019 FLO--09-D06.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-D06,
mRNA sequence
Length = 539
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 132 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 191
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 192 cgcgggtcgtcaagactccgggtggcaagctcgtgtaccagtacaccaagaagagggcga 251
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 252 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 311
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 312 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 371
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 372 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 431
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 432 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 474
>gb|CV734250.1|CV734250 FLO--09-I12.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-I12,
mRNA sequence
Length = 530
Score = 236 bits (119), Expect = 1e-059
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 125 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 184
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 185 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 244
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 245 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 304
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 305 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 364
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 365 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 424
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 425 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 467
>gb|AU161742.1|AU161742 AU161742 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5251, mRNA sequence
Length = 458
Score = 232 bits (117), Expect = 2e-058
Identities = 273/325 (84%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 71 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 130
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 131 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 190
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 191 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 250
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 251 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 310
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 311 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 370
Query: 360 agaagatagtgaagaaggtgttgaa 384
||||||| |||||||| || |||||
Sbjct: 371 agaagattgtgaagaaagtcttgaa 395
>gb|CF291106.1|CF291106 14ROOT--01-G11.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-G11, mRNA sequence
Length = 608
Score = 228 bits (115), Expect = 3e-057
Identities = 286/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 86 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 145
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 146 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 205
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 206 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 265
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 266 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 325
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| ||||| |||||||| |||||||| || || || |||||||| || |
Sbjct: 326 gagtgctctctggaactgcggttagggaaaggatcattcgtgctttcttggttgaagagc 385
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 386 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 428
>gb|CF333503.1|CF333503 JMT--02-G21.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G21, mRNA sequence
Length = 621
Score = 228 bits (115), Expect = 3e-057
Identities = 286/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 84 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 143
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 144 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 203
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 204 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 263
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 264 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 323
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || | ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 324 gggtgcactctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 383
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 384 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 426
>gb|AU068726.1|AU068726 AU068726 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50264_1A, mRNA sequence
Length = 461
Score = 224 bits (113), Expect = 5e-056
Identities = 272/325 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 71 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 130
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 131 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 190
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 191 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 250
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 251 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 310
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||| | || |
Sbjct: 311 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggtttaagagc 370
Query: 360 agaagatagtgaagaaggtgttgaa 384
||||||| |||||||| || |||||
Sbjct: 371 agaagattgtgaagaaagtcttgaa 395
>gb|AU068998.2|AU068998 AU068998 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51593_11A, mRNA sequence
Length = 411
Score = 224 bits (113), Expect = 5e-056
Identities = 265/316 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 62 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 121
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 122 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 181
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 182 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 241
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 242 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 301
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || || ||||| || |
Sbjct: 302 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttngttgaagagc 361
Query: 360 agaagatagtgaagaa 375
||||||| ||||||||
Sbjct: 362 agaagattgtgaagaa 377
>gb|AU069919.1|AU069919 AU069919 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20175_5A, mRNA sequence
Length = 451
Score = 222 bits (112), Expect = 2e-055
Identities = 266/316 (84%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 74 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaa-tctaatcaga 132
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 133 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 192
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 193 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 252
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 253 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 312
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 313 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 372
Query: 360 agaagatagtgaagaa 375
||||||| ||||||||
Sbjct: 373 agaagattgtgaagaa 388
>gb|CF298216.1|CF298216 7LEAF--01-I04.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--01-I04, mRNA sequence
Length = 471
Score = 220 bits (111), Expect = 7e-055
Identities = 285/343 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 13 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 72
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||| || || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 73 cgcgggtcgtcattactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 132
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 133 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 192
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 193 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 252
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 253 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 312
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 313 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 355
>gb|D38864.1|D38864 RICC1768A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 491
Score = 218 bits (110), Expect = 3e-054
Identities = 271/325 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 44 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 103
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 104 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 163
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 164 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 223
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 224 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 283
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||| | || |
Sbjct: 284 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggtttaagagc 343
Query: 360 agaagatagtgaagaaggtgttgaa 384
||||||| || ||||| || |||||
Sbjct: 344 agaagattgtnaagaaagtcttgaa 368
>gb|AU069615.1|AU069615 AU069615 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C63324_1A, mRNA sequence
Length = 446
Score = 214 bits (108), Expect = 4e-053
Identities = 257/307 (83%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 65 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 124
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 125 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 184
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 185 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctnaggcctg 244
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 245 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 304
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| ||| |||| || || || |||||||| || |
Sbjct: 305 gagtgctctctggaactgcagttagggaaaggttcattcgtgctttcttggttgaagagc 364
Query: 360 agaagat 366
|||||||
Sbjct: 365 agaagat 371
>gb|AU164079.1|AU164079 AU164079 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12162, mRNA sequence
Length = 625
Score = 206 bits (104), Expect = 1e-050
Identities = 285/343 (83%), Gaps = 2/343 (0%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || ||| |||||| ||||| || || || ||||
Sbjct: 12 agatggtgcagcgcctgacgtaccgcaaaaggcncagctatgccacgaagtctaatcaga 71
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||| ||||||||||| | ||||
Sbjct: 72 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccag-acaccaagaagag-gcga 129
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 130 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 189
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 190 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 249
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| |||||||||||||| |||||||| || || || |||||||| || |
Sbjct: 250 gagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagc 309
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 310 agaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 352
>gb|AU160893.1|AU160893 AU160893 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52164, mRNA sequence
Length = 577
Score = 204 bits (103), Expect = 4e-050
Identities = 260/311 (83%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 93 acagctacgccaccaaatcgaaccagacccgcgtcgtcaagacacctggtgggaaacttg 152
||||||| ||||| || || || ||||| || ||||||||||| || ||||| || || |
Sbjct: 1 acagctatgccacgaagtctaatcagacgcgggtcgtcaagactccaggtggcaagctcg 60
Query: 153 tgtaccagtacaccaagaagcgcgcgagcggaccgaagtg-cccagtcaccgggaagaag 211
|||||||||||||||||||| | |||||||| || ||||| ||| || ||||||||||||
Sbjct: 61 tgtaccagtacaccaagaagagggcgagcgggcccaagtgnccccgtgaccgggaagaag 120
Query: 212 atccaaggaattccacacctgagacctgctgagtacaagaggtccaggttggcaaggaac 271
||||| |||||||| || || || ||||||||||||||||| ||||||||| | ||||||
Sbjct: 121 atccagggaattccccatctcaggcctgctgagtacaagagatccaggttgtctaggaac 180
Query: 272 caaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcagttagggagagg 331
| || |||||||| ||||| ||||| || || || ||||| |||||||||||||| |||
Sbjct: 181 cgcagaactgtgaaccgtccctatggtggagtgctctctggaactgcagttagggaaagg 240
Query: 332 atcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtgttgaagatccaa 391
||||| || || || |||||||| || |||||||| |||||||| || ||||| || ||
Sbjct: 241 atcattcgtgctttcttggttgaagagcagaagattgtgaagaaagtcttgaaaatacag 300
Query: 392 aagaccaagga 402
|| ||||||||
Sbjct: 301 aaaaccaagga 311
>gb|AU160892.1|AU160892 AU160892 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52164, mRNA sequence
Length = 401
Score = 202 bits (102), Expect = 2e-049
Identities = 233/277 (84%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 49 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 108
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 109 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 168
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 169 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 228
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 229 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 288
Query: 300 gtgttctgtctggtactgcagttagggagaggatcat 336
| || || ||||| ||| |||||||||| ||||||||
Sbjct: 289 gagtgctctctggaactncagttagggaaaggatcat 325
>gb|CF333502.1|CF333502 JMT--02-G21.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G21, mRNA sequence
Length = 579
Score = 196 bits (99), Expect = 1e-047
Identities = 231/275 (84%)
Strand = Plus / Minus
Query: 128 gtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccg 187
|||||||| || ||||| || || ||||||||||||||||||||| | |||||||| ||
Sbjct: 567 gtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagcgggccc 508
Query: 188 aagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagtac 247
|||||||| || ||||||||||||||||| |||||||| || || || ||||||||||||
Sbjct: 507 aagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctgctgagtac 448
Query: 248 aagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctg 307
||||| ||||||||| | ||||||| || |||||||| ||||| ||||| || || |
Sbjct: 447 aagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtggggtgcac 388
Query: 308 tctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaagata 367
||||| |||||||||||||| |||||||| || || || |||||||| || ||||||||
Sbjct: 387 tctggaactgcagttagggaaaggatcattcgtgctttcttggttgaagagcagaagatt 328
Query: 368 gtgaagaaggtgttgaagatccaaaagaccaagga 402
|||||||| || ||||| || || || ||||||||
Sbjct: 327 gtgaagaaagtcttgaaaatacagaaaaccaagga 293
>gb|D38797.1|D38797 RICC0418A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 327
Score = 180 bits (91), Expect = 6e-043
Identities = 234/279 (83%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 48 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 107
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 108 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 167
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 168 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 227
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgt-gaatcgtccatatggc 298
||||||||||||| ||||||||| | ||||||| || ||||| ||| ||||| |||||
Sbjct: 228 ctgagtacaagagatccaggttgtctaggaaccgcagaactgtggaaccgtccctatggt 287
Query: 299 ggtgttctgtct-ggtactgcagttagggagaggatcat 336
|| || || ||| || |||||||||||||| ||||||||
Sbjct: 288 ggagtgctctctgggaactgcagttagggaaaggatcat 326
>gb|CB683249.1|CB683249 OSJNEf11G05.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11G05 5', mRNA sequence
Length = 514
Score = 180 bits (91), Expect = 6e-043
Identities = 280/343 (81%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 19 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 78
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 79 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 138
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 139 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 198
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
|||||||||| || ||||||||| | ||||||| || |||||||| ||||| ||||| |
Sbjct: 199 ctgagtacaatagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatggtg 258
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| ||||| || ||| |||||||| | || || |||||||| || |
Sbjct: 259 gagtgctctctggaactgcttttttggaaaggatcattcatgctttcttggttgaagagc 318
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 319 ataagattgtgaagaaagtcttgaaaatacagaaaaccaagga 361
>gb|D38960.2|D38960 RICC2984A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 311
Score = 168 bits (85), Expect = 2e-039
Identities = 181/213 (84%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 64 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 123
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || ||||||||||||||||||||| | ||||
Sbjct: 124 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccagtacaccaagaagagggcga 183
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| || ||||||||||||||||| |||||||| || || || ||||
Sbjct: 184 gcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggcctg 243
Query: 240 ctgagtacaagaggtccaggttggcaaggaacc 272
||||||||||||| ||||||||| | |||||||
Sbjct: 244 ctgagtacaagagatccaggttgtctaggaacc 276
>gb|CF298215.1|CF298215 7LEAF--01-I04.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--01-I04, mRNA sequence
Length = 501
Score = 165 bits (83), Expect = 4e-038
Identities = 191/227 (84%)
Strand = Plus / Minus
Query: 176 gcgagcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgaga 235
|||||||| || |||||||| || ||||||||||||||||| |||||||| || || ||
Sbjct: 499 gcgagcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcagg 440
Query: 236 cctgctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatat 295
||||||||||||||||| ||||||||| | ||||||| || |||||||| ||||| |||
Sbjct: 439 cctgctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctat 380
Query: 296 ggcggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgag 355
|| || || || ||||| |||||||||||||| |||||||| || || || ||||||||
Sbjct: 379 ggtggagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaa 320
Query: 356 gaacagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|| |||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 319 gagcagaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 273
>gb|CF319099.1|CF319099 HD--09-H19.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-H19, mRNA sequence
Length = 501
Score = 165 bits (83), Expect = 4e-038
Identities = 191/227 (84%)
Strand = Plus / Minus
Query: 176 gcgagcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgaga 235
|||||||| || |||||||| || ||||||||||||||||| |||||||| || || ||
Sbjct: 498 gcgagcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcagg 439
Query: 236 cctgctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatat 295
||||||||||||||||| ||||||||| | ||||||| || |||||||| ||||| |||
Sbjct: 438 cctgctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctat 379
Query: 296 ggcggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgag 355
|| || || || ||||| |||||||||||||| |||||||| || || || ||||||||
Sbjct: 378 ggtggagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaa 319
Query: 356 gaacagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
|| |||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 318 gagcagaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 272
>gb|CV731034.1|CV731034 FLO--04-O02.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-O02,
mRNA sequence
Length = 496
Score = 163 bits (82), Expect = 1e-037
Identities = 190/226 (84%)
Strand = Plus / Minus
Query: 177 cgagcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagac 236
||||||| || |||||||| || ||||||||||||||||| |||||||| || || || |
Sbjct: 496 cgagcgggcccaagtgccccgtgaccgggaagaagatccagggaattccccatctcaggc 437
Query: 237 ctgctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatg 296
|||||||||||||||| ||||||||| | ||||||| || |||||||| ||||| ||||
Sbjct: 436 ctgctgagtacaagagatccaggttgtctaggaaccgcagaactgtgaaccgtccctatg 377
Query: 297 gcggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgagg 356
| || || || ||||| |||||||||||||| |||||||| || || || |||||||| |
Sbjct: 376 gtggagtgctctctggaactgcagttagggaaaggatcattcgtgctttcttggttgaag 317
Query: 357 aacagaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
| |||||||| |||||||| || ||||| || || || ||||||||
Sbjct: 316 agcagaagattgtgaagaaagtcttgaaaatacagaaaaccaagga 271
>gb|D38966.1|D38966 RICC3087A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 312
Score = 157 bits (79), Expect = 9e-036
Identities = 219/268 (81%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| || || ||||| || |||||||||| ||||| || || || ||||
Sbjct: 44 agatggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcaga 103
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| || ||||||||||| || ||||| || || |||||||| |||||||||| | | || |
Sbjct: 104 cgcgggtcgtcaagactccaggtggcaagctcgtgtaccattacaccaagangagggcna 163
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
||| | |||||||| || ||||||||||||||||| |||||||| || || || |||
Sbjct: 164 gcgngnccaagtgccccgtnaccgggaagaagatccagggaattccccatctcaggccta 223
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||| ||||||||| | ||||||| || ||| |||| ||||| ||||| |
Sbjct: 224 ctgagtacaagagatccaggttgtctaggaaccgcagaactntgaaccgtccctatggtg 283
Query: 300 gtgttctgtctggtactgcagttaggga 327
| || || ||||| ||||||||||||||
Sbjct: 284 gngtgctctctggaactgcagttaggga 311
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 902,484
Number of Sequences: 438736
Number of extensions: 902484
Number of successful extensions: 5971
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5698
Number of HSP's gapped (non-prelim): 260
length of query: 644
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 623
effective length of database: 2,791,206,460
effective search space: 1738921624580
effective search space used: 1738921624580
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)