BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192909.2.3
(674 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU163751.1|AU163751 AU163751 Rice panicle at ripening st... 303 6e-080
gb|CB651201.1|CB651201 OSJNEb16B06.r OSJNEb Oryza sativa (j... 303 6e-080
gb|CB651582.1|CB651582 OSJNEb16J14.r OSJNEb Oryza sativa (j... 303 6e-080
gb|CB681565.1|CB681565 OSJNEf07P21.r OSJNEf Oryza sativa (j... 303 6e-080
gb|CF325944.1|CF325944 JMT1--04-K17.g1 AtJMT-overexpressing... 303 6e-080
dbj|AK061859.1| Oryza sativa (japonica cultivar-group) cDNA... 303 6e-080
dbj|AP004460.2| Oryza sativa (japonica cultivar-group) geno... 303 6e-080
gb|AACV01017317.1| Oryza sativa (japonica cultivar-group) c... 303 6e-080
ref|XM_480185.1| Oryza sativa (japonica cultivar-group), mRNA 303 6e-080
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 303 6e-080
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 303 6e-080
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 303 6e-080
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 303 6e-080
gb|DQ288259.1| Oryza sativa (japonica cultivar-group) O-met... 303 6e-080
dbj|AK064768.1| Oryza sativa (japonica cultivar-group) cDNA... 299 1e-078
dbj|AB122056.1| Oryza sativa (japonica cultivar-group) COMT... 299 1e-078
gb|AU095959.1|AU095959 AU095959 Rice green shoot Oryza sati... 291 2e-076
gb|AU085932.1|AU085932 AU085932 Rice panicle at flowering s... 272 2e-070
gb|C73751.1|C73751 C73751 Rice panicle (longer than 10cm) O... 270 9e-070
gb|AU198060.1|AU198060 AU198060 Rice green shoot Oryza sati... 234 5e-059
gb|C99656.1|C99656 C99656 Rice panicle (longer than 10cm) O... 220 7e-055
gb|CF325150.1|CF325150 JMT1--02-H07.g1 AtJMT-overexpressing... 206 1e-050
gb|D46840.1|D46840 RICS11759A Rice green shoot Oryza sativa... 200 7e-049
gb|AU070765.1|AU070765 AU070765 Rice cDNA from young root O... 200 7e-049
gb|AU198061.1|AU198061 AU198061 Rice green shoot Oryza sati... 200 7e-049
gb|CB645456.1|CB645456 OSJNEb07C10.f OSJNEb Oryza sativa (j... 200 7e-049
gb|CB645457.1|CB645457 OSJNEb07C10.r OSJNEb Oryza sativa (j... 200 7e-049
gb|CV722886.1|CV722886 root--01-N20.g1 Rice root lambda pha... 200 7e-049
gb|D24498.1|D24498 RICR2063A Rice root Oryza sativa (japoni... 196 1e-047
gb|AU173314.1|AU173314 AU173314 Rice root Oryza sativa (jap... 188 3e-045
gb|C19572.1|C19572 C19572 Rice panicle at ripening stage Or... 186 1e-044
gb|CV721360.1|CV721360 YBH--03-N09.b1 Rice before heading y... 186 1e-044
gb|C99657.1|C99657 C99657 Rice panicle (longer than 10cm) O... 180 6e-043
gb|AU031937.1|AU031937 AU031937 Rice root Oryza sativa (jap... 172 2e-040
gb|AU032336.1|AU032336 AU032336 Rice root Oryza sativa (jap... 165 4e-038
gb|CV721207.1|CV721207 YBH--03-E11.b1 Rice before heading y... 145 4e-032
gb|AU093778.1|AU093778 AU093778 Rice panicle at flowering s... 121 5e-025
gb|AU095858.1|AU095858 AU095858 Rice green shoot Oryza sati... 121 5e-025
gb|CB684815.1|CB684815 OSJNEf14L06.f OSJNEf Oryza sativa (j... 119 2e-024
gb|D48341.1|D48341 RICS14489A Rice green shoot Oryza sativa... 115 3e-023
gb|CX728866.1|CX728866 OSJNEf14L06.r OSJNEf Oryza sativa (j... 105 3e-020
gb|AU031827.1|AU031827 AU031827 Rice root Oryza sativa (jap... 103 1e-019
gb|CA755252.1|CA755252 BR030016000_PLATE_D12_92_101.ab1 OA ... 86 3e-014
gb|D46555.1|D46555 RICS11309A Rice green shoot Oryza sativa... 82 4e-013
gb|AU095859.1|AU095859 AU095859 Rice green shoot Oryza sati... 68 7e-009
gb|D46556.1|D46556 RICS11310A Rice green shoot Oryza sativa... 60 2e-006
dbj|AK110689.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.024
gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 ... 46 0.024
gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 ... 46 0.024
gb|AC120884.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.024
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 46 0.024
gb|AACV01000698.1| Oryza sativa (japonica cultivar-group) c... 46 0.024
gb|AACV01007989.1| Oryza sativa (japonica cultivar-group) c... 46 0.024
gb|AACV01008007.1| Oryza sativa (japonica cultivar-group) c... 46 0.024
ref|NM_184892.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.024
ref|XM_469899.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.024
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 46 0.024
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.024
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.024
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.024
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.024
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 46 0.024
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 46 0.024
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.024
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.024
gb|CA754655.1|CA754655 BR030004000_PLATE_A09_65_068.ab1 OA ... 42 0.38
gb|CB640739.1|CB640739 OSJNEa16C20.f OSJNEa Oryza sativa (j... 42 0.38
dbj|AP003834.1| Oryza sativa (japonica cultivar-group) chro... 42 0.38
dbj|AK073697.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.38
dbj|AP005385.3| Oryza sativa (japonica cultivar-group) geno... 42 0.38
gb|AACV01004851.1| Oryza sativa (japonica cultivar-group) c... 42 0.38
gb|AACV01015971.1| Oryza sativa (japonica cultivar-group) c... 42 0.38
ref|XM_466575.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.38
ref|XM_477793.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.38
dbj|AP005200.4| Oryza sativa (japonica cultivar-group) geno... 42 0.38
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 42 0.38
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 42 0.38
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.38
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.38
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.38
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.38
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 42 0.38
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 42 0.38
>gb|AU163751.1|AU163751 AU163751 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10625, mRNA sequence
Length = 603
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 343 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 284
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 283 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 224
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 223 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 164
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 163 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 104
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 103 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 44
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 43 tcaggatggcgtcgccg 27
>gb|CB651201.1|CB651201 OSJNEb16B06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16B06 3', mRNA sequence
Length = 738
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 260 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 319
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 320 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 379
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 380 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 439
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 440 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 499
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 500 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 559
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 560 tcaggatggcgtcgccg 576
>gb|CB651582.1|CB651582 OSJNEb16J14.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16J14 3', mRNA sequence
Length = 821
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 292 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 351
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 352 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 411
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 412 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 471
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 472 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 531
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 532 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 591
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 592 tcaggatggcgtcgccg 608
>gb|CB681565.1|CB681565 OSJNEf07P21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07P21 3', mRNA sequence
Length = 813
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 340 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 399
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 400 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 459
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 460 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 519
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 520 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 579
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 580 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 639
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 640 tcaggatggcgtcgccg 656
>gb|CF325944.1|CF325944 JMT1--04-K17.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-K17, mRNA sequence
Length = 641
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 271 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 330
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 331 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 390
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 391 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 450
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 451 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 510
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 511 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 570
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 571 tcaggatggcgtcgccg 587
>dbj|AK061859.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G09, full
insert sequence
Length = 1227
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 985 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 926
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 925 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 866
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 865 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 806
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 805 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 746
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 745 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 686
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 685 tcaggatggcgtcgccg 669
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0438H08
Length = 148626
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 109265 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 109324
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 109325 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 109384
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 109385 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 109444
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 109445 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 109504
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 109505 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 109564
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 109565 tcaggatggcgtcgccg 109581
>gb|AACV01017317.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017317, whole
genome shotgun sequence
Length = 20616
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 9805 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 9746
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 9745 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 9686
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 9685 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 9626
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 9625 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 9566
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9565 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 9506
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 9505 tcaggatggcgtcgccg 9489
>ref|XM_480185.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1425
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 1187 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 1128
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 1127 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 1068
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 1067 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 1008
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 1007 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 948
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 947 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 888
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 887 tcaggatggcgtcgccg 871
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 3099224 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 3099283
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 3099284 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 3099343
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 3099344 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 3099403
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 3099404 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 3099463
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3099464 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 3099523
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 3099524 tcaggatggcgtcgccg 3099540
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065 genomic
scaffold, whole genome shotgun sequence
Length = 5026603
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 3258594 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 3258653
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 3258654 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 3258713
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 3258714 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 3258773
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 3258774 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 3258833
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3258834 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 3258893
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 3258894 tcaggatggcgtcgccg 3258910
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 3258594 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 3258653
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 3258654 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 3258713
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 3258714 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 3258773
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 3258774 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 3258833
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3258834 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 3258893
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 3258894 tcaggatggcgtcgccg 3258910
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 3331698 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 3331757
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 3331758 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 3331817
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 3331818 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 3331877
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 3331878 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 3331937
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3331938 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 3331997
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 3331998 tcaggatggcgtcgccg 3332014
>gb|DQ288259.1| Oryza sativa (japonica cultivar-group) O-methyltransferase (ROMT-9)
mRNA, complete cds
Length = 1190
Score = 303 bits (153), Expect = 6e-080
Identities = 276/317 (87%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 1119 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 1060
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 1059 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 1000
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 999 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 940
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 939 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 880
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 879 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 820
Query: 653 tgaggatggcgtcgccg 669
| |||||||||||||||
Sbjct: 819 tcaggatggcgtcgccg 803
>dbj|AK064768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A05, full
insert sequence
Length = 1425
Score = 299 bits (151), Expect = 1e-078
Identities = 271/311 (87%)
Strand = Plus / Minus
Query: 359 tgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggagaagccgg 418
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 1181 tgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtgaatccgg 1122
Query: 419 cgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggttgtgcg 478
|| | ||||||||| | |||||| | |||||||| ||||||||||||||||||||| |
Sbjct: 1121 cggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggttgtggg 1062
Query: 479 cgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccgtgttga 538
|||||||||||||||||||||||||||| |||||| || | | || || || | | |
Sbjct: 1061 cgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcggagctct 1002
Query: 539 ccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgtagcagt 598
|||||||||||||||| || || | ||||| || | ||||||||||||||||||||||
Sbjct: 1001 ccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgtagcagt 942
Query: 599 tcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttcatgagga 658
||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 941 tcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttcatcagga 882
Query: 659 tggcgtcgccg 669
|||||||||||
Sbjct: 881 tggcgtcgccg 871
>dbj|AB122056.1| Oryza sativa (japonica cultivar-group) COMT mRNA for caffeic acid
o-methyl transferase, partial cds
Length = 1067
Score = 299 bits (151), Expect = 1e-078
Identities = 271/311 (87%)
Strand = Plus / Minus
Query: 359 tgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggagaagccgg 418
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 799 tgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtgaatccgg 740
Query: 419 cgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggttgtgcg 478
|| | ||||||||| | |||||| | |||||||| ||||||||||||||||||||| |
Sbjct: 739 cggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggttgtggg 680
Query: 479 cgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccgtgttga 538
|||||||||||||||||||||||||||| |||||| || | | || || || | | |
Sbjct: 679 cgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcggagctct 620
Query: 539 ccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgtagcagt 598
|||||||||||||||| || || | ||||| || | ||||||||||||||||||||||
Sbjct: 619 ccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgtagcagt 560
Query: 599 tcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttcatgagga 658
||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 559 tcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttcatcagga 500
Query: 659 tggcgtcgccg 669
|||||||||||
Sbjct: 499 tggcgtcgccg 489
>gb|AU095959.1|AU095959 AU095959 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11759, mRNA sequence
Length = 581
Score = 291 bits (147), Expect = 2e-076
Identities = 270/311 (86%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 311 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 252
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 251 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 192
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 191 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 132
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 131 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 72
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 71 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 12
Query: 653 tgaggatggcg 663
| |||||||||
Sbjct: 11 tcaggatggcg 1
>gb|AU085932.1|AU085932 AU085932 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2880, mRNA sequence
Length = 635
Score = 272 bits (137), Expect = 2e-070
Identities = 271/315 (86%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 373 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 314
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| || ||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 313 atccngcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 254
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 253 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 194
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 193 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 134
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccac-ttc 651
|||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||
Sbjct: 133 agcagttcttgagcagncgcgcgcagtgctcgtcgctccagtcgtggaggatccactttc 74
Query: 652 atgaggatggcgtcg 666
|| ||||||||||||
Sbjct: 73 atcaggatggcgtcg 59
>gb|C73751.1|C73751 C73751 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20380_1A, mRNA sequence
Length = 376
Score = 270 bits (136), Expect = 9e-070
Identities = 271/317 (85%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| ||||||||||||||||| ||||| |||||||||||||||||||||| |||| ||
Sbjct: 328 acttggtgaactcgatggcccagccgttgncgtagatgtaggtggccttgaagccggtga 269
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| ||| || | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 268 atccgncggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 209
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccg 532
|||| ||||||||||||||||||||||||||||| |||||| || | | || || || |
Sbjct: 208 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcgg 149
Query: 533 tgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgt 592
| | |||||||||||||||| || || | ||||| || | ||||||||||||||||
Sbjct: 148 agctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgt 89
Query: 593 agcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttca 652
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 88 agcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttca 29
Query: 653 tgaggatggcgtcgccg 669
| |||| |||||||||
Sbjct: 28 tcaggantgcgtcgccg 12
>gb|AU198060.1|AU198060 AU198060 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15191, mRNA sequence
Length = 453
Score = 234 bits (118), Expect = 5e-059
Identities = 249/292 (85%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 378 gttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggcgagctcgcg 437
||||||||| |||||||||||||| || |||| ||| ||| || | ||||||||| |
Sbjct: 453 gttggcgtanatgtaggtggcctt-aagccggtgaatccgncggcgcgggcgagctccct 395
Query: 438 gaactcgcgctcgtaccgctccttgccgccggggttgtgcgcgagcatgatcatgtcgac 497
|||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 394 gaactccctctcgtacctctccttgccgccggggttgtgggcgagcatgatcatgtcgac 335
Query: 498 gtggaacacgccctgcgccttgggggtggcctccgtgttgaccggcagcacgcactcgac 557
||||||||| |||||| || | | || || || | | | |||||||||||||||| ||
Sbjct: 334 gtggaacaccccctgctccctcgccgtcgcgtcggagctctccggcagcacgcactccac 275
Query: 558 gacgatgaccttgccattttccggcagcgcgtcgtagcagttcttgagcagcgtggcgca 617
|| | ||||| || | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 274 caccaccaccttcccgtgctccggcagcgcgtcgtagcagttcttgagcagccgcgcgca 215
Query: 618 gtgcgcgtcgctccagtcgtggaggatccacttcatgaggatggcgtcgccg 669
|||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 214 gtgctcgtcgctccagtcgtggaggatccacttcatcaggatggcgtcgccg 163
>gb|C99656.1|C99656 C99656 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E21012_1A, mRNA sequence
Length = 462
Score = 220 bits (111), Expect = 7e-055
Identities = 268/315 (85%), Gaps = 4/315 (1%)
Strand = Plus / Minus
Query: 359 tgaactcgatggccca-ggcgttggcgtagat-gtaggtggcctt-gaacccggagaagc 415
|||||||||||||||| ||||||| ||||||| |||||||||||| ||| |||| ||| |
Sbjct: 327 tgaactcgatggcccaaggcgttgccgtagattgtaggtggcctttgaagccggtgaatc 268
Query: 416 cggcgcccttggcga-gctcgcggaactcgcgctcgtaccgctccttgccgccggggttg 474
||||| | ||||| |||| | |||||| | |||||||| |||||||||||||||||||
Sbjct: 267 cggcggcgcgggcgaagctccctgaactccctctcgtacctctccttgccgccggggttg 208
Query: 475 tgcgcgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccgtg 534
|| ||||||||||||||||||||||||||||| |||||| || | | || || || | |
Sbjct: 207 tgggcgagcatgatcatgtcgacgtggaacaccccctgctccctcgccgtcgcgtcggag 148
Query: 535 ttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgtag 594
| |||||||||||||||| || || | ||||| || | ||||||||||||||||||
Sbjct: 147 ctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgtcgtag 88
Query: 595 cagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgtggaggatccacttcatg 654
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 87 cagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgtggaggatccacttcatc 28
Query: 655 aggatggcgtcgccg 669
|||| |||||||||
Sbjct: 27 aggaatgcgtcgccg 13
>gb|CF325150.1|CF325150 JMT1--02-H07.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--02-H07, mRNA sequence
Length = 557
Score = 206 bits (104), Expect = 1e-050
Identities = 245/288 (85%), Gaps = 3/288 (1%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 270 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 329
Query: 413 agc-cggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccgggg 471
| | ||||| | ||||||||| | |||||| | |||||||| ||||||||||||||||
Sbjct: 330 atctcggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 389
Query: 472 -ttgtgcgcgagcatgat-catgtcgacgtggaacacgccctgcgccttgggggtggcct 529
||||| ||||||||||| |||||||||||||||||| |||||| || | | || || |
Sbjct: 390 nttgtgggcgagcatgatncatgtcgacgtggaacaccccctgctccctcgccgtcgcgt 449
Query: 530 ccgtgttgaccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgt 589
| | | | |||||||||||||||| || || | ||||| || | |||||||||||||
Sbjct: 450 cggagctctccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcgcgt 509
Query: 590 cgtagcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcgt 637
|||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 510 cgtagcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcgt 557
>gb|D46840.1|D46840 RICS11759A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 237
Score = 200 bits (101), Expect = 7e-049
Identities = 197/229 (86%)
Strand = Plus / Minus
Query: 438 gaactcgcgctcgtaccgctccttgccgccggggttgtgcgcgagcatgatcatgtcgac 497
|||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 236 gaactccctctcgtacctctccttgccgccggggttgtgggcgagcatgatcatgtcgac 177
Query: 498 gtggaacacgccctgcgccttgggggtggcctccgtgttgaccggcagcacgcactcgac 557
||||||||| |||||| || | | || || || | | | ||||||| |||||||| ||
Sbjct: 176 gtggaacaccccctgctccctcgccgtcgcgtcggagctctccggcagaacgcactccac 117
Query: 558 gacgatgaccttgccattttccggcagcgcgtcgtagcagttcttgagcagcgtggcgca 617
|| | ||||| || | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 116 caccaccaccttcccgtgctccggcagcgcgtcgtagcagttcttgagcagccgcgcgca 57
Query: 618 gtgcgcgtcgctccagtcgtggaggatccacttcatgaggatggcgtcg 666
|||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 56 gtgctcgtcgctccagtcgtggaggatccacttcatcaggatggcgtcg 8
>gb|AU070765.1|AU070765 AU070765 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10214_1A, mRNA sequence
Length = 516
Score = 200 bits (101), Expect = 7e-049
Identities = 146/161 (90%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 229 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 170
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 169 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 110
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 109 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 69
>gb|AU198061.1|AU198061 AU198061 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15191, mRNA sequence
Length = 449
Score = 200 bits (101), Expect = 7e-049
Identities = 146/161 (90%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 189 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 130
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 129 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 70
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 69 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 29
>gb|CB645456.1|CB645456 OSJNEb07C10.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07C10 5', mRNA sequence
Length = 792
Score = 200 bits (101), Expect = 7e-049
Identities = 146/161 (90%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 707 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 648
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 647 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 588
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 587 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 547
Score = 65.9 bits (33), Expect = 3e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 633 gtcgtggaggatccacttcatgaggatggcgtcgccg 669
||||||||||||||||||||| |||||||||||||||
Sbjct: 472 gtcgtggaggatccacttcatcaggatggcgtcgccg 436
>gb|CB645457.1|CB645457 OSJNEb07C10.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07C10 3', mRNA sequence
Length = 795
Score = 200 bits (101), Expect = 7e-049
Identities = 146/161 (90%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 282 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 341
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 342 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 401
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 402 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 442
Score = 65.9 bits (33), Expect = 3e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 633 gtcgtggaggatccacttcatgaggatggcgtcgccg 669
||||||||||||||||||||| |||||||||||||||
Sbjct: 517 gtcgtggaggatccacttcatcaggatggcgtcgccg 553
>gb|CV722886.1|CV722886 root--01-N20.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--01-N20, mRNA sequence
Length = 428
Score = 200 bits (101), Expect = 7e-049
Identities = 146/161 (90%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 265 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 324
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||||||||||||||||
Sbjct: 325 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggt 384
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 385 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 425
>gb|D24498.1|D24498 RICR2063A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2063_1A, mRNA sequence
Length = 270
Score = 196 bits (99), Expect = 1e-047
Identities = 226/270 (83%)
Strand = Plus / Minus
Query: 377 cgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggcgagctcgc 436
|||||||||||||||||||| ||||||| |||| ||| |||||| | | ||||| | |
Sbjct: 270 cgttggcgtagatgtaggtgnccttgaagccggtgaatccggcggcgcggncgagcnccc 211
Query: 437 ggaactcgcgctcgtaccgctccttgccgccggggttgtgcgcgagcatgatcatgtcga 496
|||||| | |||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 210 tgaactccctctcgtacctctccttgccgccggggttgtgggcgagcatgatcatgtcga 151
Query: 497 cgtggaacacgccctgcgccttgggggtggcctccgtgttgaccggcagcacgcactcga 556
|||||||||| |||||| || | | || || || | | | ||||||| |||||||| |
Sbjct: 150 cgtggaacaccccctgctccctcgccgtcgcgtcggagctctccggcagnacgcactcca 91
Query: 557 cgacgatgaccttgccattttccggcagcgcgtcgtagcagttcttgagcagcgtggcgc 616
| || | ||||| || | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 90 ccaccaccaccttcccgtgctccggcagcgcgtcgtagcagttcttgagcagccgcgcgc 31
Query: 617 agtgcgcgtcgctccagtcgtggaggatcc 646
||||| ||||||||||||||||| ||||||
Sbjct: 30 agtgctcgtcgctccagtcgtggnggatcc 1
>gb|AU173314.1|AU173314 AU173314 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2127, mRNA sequence
Length = 463
Score = 188 bits (95), Expect = 3e-045
Identities = 144/161 (89%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||
Sbjct: 200 acttggtgaactcgatggcccaggcgttggcgtanatgtaggtggccttgaagccggtga 141
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||| ||| |||||||||||||||||
Sbjct: 140 atccggcggcgcgggcgagctccctgaactccctctcgnacctctccttgccgccggggt 81
Query: 473 tgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 80 tgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 40
>gb|C19572.1|C19572 C19572 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10625_1A, mRNA sequence
Length = 429
Score = 186 bits (94), Expect = 1e-044
Identities = 146/162 (90%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaac-ccggag 411
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 342 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaaagccggtg 283
Query: 412 aagccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccgggg 471
|| |||||| | ||||||||| | |||||| | |||||||| ||||||||||||||||
Sbjct: 282 aatccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 223
Query: 472 ttgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 222 ttgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 181
Score = 121 bits (61), Expect = 5e-025
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 577 tccggcagcgcgtcgtagcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcg 636
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 118 tccggcagcgcgtcgtagcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcg 59
Query: 637 tggaggatccacttcat 653
|||||||||||||||||
Sbjct: 58 tggaggatccacttcat 42
>gb|CV721360.1|CV721360 YBH--03-N09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-N09, mRNA sequence
Length = 459
Score = 186 bits (94), Expect = 1e-044
Identities = 146/162 (90%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 254 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 313
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccgggg- 471
| |||||| | ||||||||| | |||||| | |||||||| ||||||||||||||||
Sbjct: 314 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggn 373
Query: 472 ttgtgcgcgagcatgatcatgtcgacgtggaacacgccctgc 513
||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 374 ttgtgggcgagcatgatcatgtcgacgtggaacaccccctgc 415
>gb|C99657.1|C99657 C99657 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E21012_6Z, mRNA sequence
Length = 460
Score = 180 bits (91), Expect = 6e-043
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 360 gaactcgatggcccaggcgttggcgtagatgtaggtggccttgaac-ccggagaagccgg 418
||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 170 gaactcgatggcccaggcgttggcgtagatgtaggtggccttgaaagccggtgaatccgg 111
Query: 419 cgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggttgtgcg 478
|| | ||||||||| | |||||| | |||||||| ||||||||||||||||||||| |
Sbjct: 110 cggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggttgtggg 51
Query: 479 cgagcatgatcatgtcgacgtggaacacgccctgc 513
|||||||||||||||||||||||||||| ||||||
Sbjct: 50 cgagcatgatcatgtcgacgtggaacaccccctgc 16
>gb|AU031937.1|AU031937 AU031937 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2723_6Z, mRNA sequence
Length = 412
Score = 172 bits (87), Expect = 2e-040
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 154 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 95
Query: 413 agccggc-gcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccgggg 471
| ||||| | | ||||||||| | |||||| | |||||||| ||||||||||||||||
Sbjct: 94 atccggcgggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 35
Query: 472 ttgtgcgcgagcatgatcatgtcgacgtggaaca 505
||||| |||| |||||||||||||||||||||||
Sbjct: 34 ttgtgggcgancatgatcatgtcgacgtggaaca 1
>gb|AU032336.1|AU032336 AU032336 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3910_4Z, mRNA sequence
Length = 500
Score = 165 bits (83), Expect = 4e-038
Identities = 146/163 (89%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 239 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 180
Query: 413 agccggcgcccttggcgagctcgc-ggaactcgcgctcgtaccgctcctt-gccgccggg 470
| |||||| | ||||||||| | ||||||| | |||||||| |||||| |||||||||
Sbjct: 179 atccggcggcgcgggcgagctccctggaactccctctcgtacctctccttggccgccggg 120
Query: 471 gttgtgcgcgagcat-gatcatgtcgacgtggaacacgccctg 512
|||||| |||||||| ||||||||||||||||||||| |||||
Sbjct: 119 gttgtgggcgagcatggatcatgtcgacgtggaacaccccctg 77
>gb|CV721207.1|CV721207 YBH--03-E11.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-E11, mRNA sequence
Length = 166
Score = 145 bits (73), Expect = 4e-032
Identities = 88/93 (94%)
Strand = Plus / Minus
Query: 577 tccggcagcgcgtcgtagcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcg 636
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 148 tccggcagcgcgtcgtagcagttcttgagcagccgcgcgcagtgctcgtcgctccagtcg 89
Query: 637 tggaggatccacttcatgaggatggcgtcgccg 669
||||||||||||||||| |||||||||||||||
Sbjct: 88 tggaggatccacttcatcaggatggcgtcgccg 56
>gb|AU093778.1|AU093778 AU093778 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0259, mRNA sequence
Length = 397
Score = 121 bits (61), Expect = 5e-025
Identities = 120/138 (86%), Gaps = 2/138 (1%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||| |||||||||||||||||||||| |||||| |||| ||
Sbjct: 140 acttggtgaactcgatggcccangcgttggcgtagatgtaggtggncttgaagccggtga 81
Query: 413 agccggcgcccttggcgagctcgc-ggaactcgcgctcgtaccgctccttg-ccgccggg 470
| |||||| | ||||||||| | ||||||| | |||||||| ||||||| ||| ||||
Sbjct: 80 atccggcggcgcgggcgagctccctggaactccctctcgtacctctccttgcccgncggg 21
Query: 471 gttgtgcgcgagcatgat 488
|||||| |||||||||||
Sbjct: 20 gttgtgggcgagcatgat 3
>gb|AU095858.1|AU095858 AU095858 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11309, mRNA sequence
Length = 381
Score = 121 bits (61), Expect = 5e-025
Identities = 106/120 (88%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 125 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 66
Query: 413 agccggcgcccttggc-gagctcgcggaactcgcgctcgtaccgctccttgccgccgggg 471
| |||||| | ||| |||||| | |||||| | |||||||| ||||||||||||||||
Sbjct: 65 atccggcgncgcgggctgagctccctgaactccctctcgtacctctccttgccgccgggg 6
>gb|CB684815.1|CB684815 OSJNEf14L06.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14L06 5', mRNA sequence
Length = 363
Score = 119 bits (60), Expect = 2e-024
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 125 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 66
Query: 413 agccggcgcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggt 472
| |||||| | ||||||||| | |||||| | |||||||| |||| | |||||||||
Sbjct: 65 atccggcggcgcgggcgagctccctgaactccctctcgtacctctccaaggcgccggggt 6
Query: 473 tgtg 476
||||
Sbjct: 5 tgtg 2
>gb|D48341.1|D48341 RICS14489A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 422
Score = 115 bits (58), Expect = 3e-023
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 577 tccggcagcgcgtcgtagcagttcttgagcagcgtggcgcagtgcgcgtcgctccagtcg 636
||||||||| ||||||||||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 327 tccggcagcacgtcgtagcagttcttgagcanccgcgcgcagtgctcgtcgctccagtcg 268
Query: 637 tggaggatccacttcatgaggatggcgtcgccg 669
||||||||||||||||| |||| |||||||||
Sbjct: 267 tggaggatccacttcatcaggaatgcgtcgccg 235
>gb|CX728866.1|CX728866 OSJNEf14L06.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14L06 3', mRNA sequence
Length = 355
Score = 105 bits (53), Expect = 3e-020
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 360 gaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggagaagccggc 419
||||||||||||||||||| ||||| | ||| ||||||||||||| |||| ||| |||||
Sbjct: 238 gaactcgatggcccaggcggtggcggatatggaggtggccttgaagccggtgaatccggc 297
Query: 420 gcccttggcgagctcgcggaactcgcgctcgtaccgctccttgccgccggggttgtg 476
| | ||||||||| | |||||| | |||||||| |||||||||||||||||||||
Sbjct: 298 ggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccggggttgtg 354
>gb|AU031827.1|AU031827 AU031827 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1976_6Z, mRNA sequence
Length = 629
Score = 103 bits (52), Expect = 1e-019
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 412
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 368 acttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtga 309
Query: 413 agccggcg 420
| ||||||
Sbjct: 308 atccggcg 301
>gb|CA755252.1|CA755252 BR030016000_PLATE_D12_92_101.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030016000_PLATE_D12_92_101.ab1 similar to Caffeic acid
3-O-methyltransferase (S-adenosysl-L-methionine:caffeic
acid 3-O-methyltransferase) (COMT) gi|283034|pir|S28612
catechol O-methyltransferase (EC 2.1.1.6) - maize
gi|168532|gb|AAB03364.1| (M73235) O-methyltransferase
[Zea mays], mRNA sequence
Length = 255
Score = 85.7 bits (43), Expect = 3e-014
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 623 cgtcgctccagtcgtggaggatccacttcatgaggatggcgtcgccg 669
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 254 cgtcgctccagtcgtggaggatccacttcatcaggatggcgtcgccg 208
>gb|D46555.1|D46555 RICS11309A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 289
Score = 81.8 bits (41), Expect = 4e-013
Identities = 108/131 (82%)
Strand = Plus / Minus
Query: 479 cgagcatgatcatgtcgacgtggaacacgccctgcgccttgggggtggcctccgtgttga 538
|||||||||||||||||||||||||||| |||||| || | | || || || | | |
Sbjct: 289 cgagcatgatcatgtcgacgtggaacaccccctgctccctcgncgtcgcgtcggagctct 230
Query: 539 ccggcagcacgcactcgacgacgatgaccttgccattttccggcagcgcgtcgtagcagt 598
|||||||||||||||| || || | ||||| || | ||||||||| ||||||||||||
Sbjct: 229 ccggcagcacgcactccaccaccaccaccttcccgtgctccggcagcncgtcgtagcagt 170
Query: 599 tcttgagcagc 609
|||||||||||
Sbjct: 169 tcttgagcagc 159
>gb|AU095859.1|AU095859 AU095859 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11310, mRNA sequence
Length = 328
Score = 67.9 bits (34), Expect = 7e-009
Identities = 51/54 (94%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 353 acttgatgaactcgatggcccag-gcgttggcgtagatgtaggt-ggccttgaa 404
||||| ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 70 acttggtgaactcgatggcccagtgcgttggcgtagatgtaggtnggccttgaa 17
>gb|D46556.1|D46556 RICS11310A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 228
Score = 60.0 bits (30), Expect = 2e-006
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 577 tccggcagcgcgtcgtagcagttcttgagcagc 609
||||||||| |||||||||||||||||||||||
Sbjct: 191 tccggcagcncgtcgtagcagttcttgagcagc 159
>dbj|AK110689.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-A02, full
insert sequence
Length = 1319
Score = 46.1 bits (23), Expect = 0.024
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 252 agaagaagacgacgacggcgacg 274
|||||||||||||||||||||||
Sbjct: 640 agaagaagacgacgacggcgacg 662
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
sequence
Length = 134496
Score = 46.1 bits (23), Expect = 0.024
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 252 agaagaagacgacgacggcgacg 274
|||||||||||||||||||||||
Sbjct: 41556 agaagaagacgacgacggcgacg 41534
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
sequence
Length = 159091
Score = 46.1 bits (23), Expect = 0.024
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 597 gttcttgagcagcgtggcgcagt 619
|||||||||||||||||||||||
Sbjct: 81137 gttcttgagcagcgtggcgcagt 81159
>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBa0017D19, complete sequence
Length = 142015
Score = 46.1 bits (23), Expect = 0.024
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 252 agaagaagacgacgacggcgacg 274
|||||||||||||||||||||||
Sbjct: 19391 agaagaagacgacgacggcgacg 19369
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,226,040
Number of Sequences: 438736
Number of extensions: 1226040
Number of successful extensions: 15263
Number of sequences better than 0.5: 83
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14561
Number of HSP's gapped (non-prelim): 665
length of query: 674
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 653
effective length of database: 2,791,206,460
effective search space: 1822657818380
effective search space used: 1822657818380
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)