BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2188214.2.1
(880 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB650079.1|CB650079 OSJNEb14F12.r OSJNEb Oryza sativa (j... 190 9e-046
gb|CB660781.1|CB660781 OSJNEd02N17.r OSJNEd Oryza sativa (j... 190 9e-046
gb|CB662978.1|CB662978 OSJNEd07H14.f OSJNEd Oryza sativa (j... 190 9e-046
gb|CB663092.1|CB663092 OSJNEd07L03.f OSJNEd Oryza sativa (j... 190 9e-046
gb|CB665389.1|CB665389 OSJNEd11M06.f OSJNEd Oryza sativa (j... 190 9e-046
gb|CB665390.1|CB665390 OSJNEd11M06.r OSJNEd Oryza sativa (j... 190 9e-046
gb|CB675652.1|CB675652 OSJNEe11I08.r OSJNEe Oryza sativa (j... 190 9e-046
gb|CF321633.1|CF321633 HD--12-P07.b1 OsHDAC1-overexpressing... 190 9e-046
gb|CF322768.1|CF322768 HDN--02-A06.g1 OsHDAC1-overexpressin... 190 9e-046
dbj|AK062155.1| Oryza sativa (japonica cultivar-group) cDNA... 190 9e-046
dbj|AK068005.1| Oryza sativa (japonica cultivar-group) cDNA... 190 9e-046
gb|CF310830.1|CF310830 ABF--05-L11.b1 ABF3-overexpressing t... 188 3e-045
gb|CF311216.1|CF311216 ABF--06-F17.b1 ABF3-overexpressing t... 188 3e-045
gb|CB674460.1|CB674460 OSJNEe09I08.r OSJNEe Oryza sativa (j... 186 1e-044
gb|CB660390.1|CB660390 OSJNEd02B07.r OSJNEd Oryza sativa (j... 184 5e-044
gb|CB665634.1|CB665634 OSJNEd12C17.r OSJNEd Oryza sativa (j... 184 5e-044
gb|CB672596.1|CB672596 OSJNEe06L08.r OSJNEe Oryza sativa (j... 184 5e-044
ref|NM_191787.1| Oryza sativa (japonica cultivar-group), p... 184 5e-044
gb|AY574990.1| Oryza sativa (japonica cultivar-group) zinc ... 182 2e-043
gb|CB660299.1|CB660299 OSJNEd01O12.r OSJNEd Oryza sativa (j... 180 8e-043
gb|CB662979.1|CB662979 OSJNEd07H14.r OSJNEd Oryza sativa (j... 180 8e-043
gb|CB668340.1|CB668340 OSJNEd16C12.r OSJNEd Oryza sativa (j... 180 8e-043
gb|CB672730.1|CB672730 OSJNEe06O16.r OSJNEe Oryza sativa (j... 178 3e-042
gb|CB643754.1|CB643754 OSJNEb04J24.r OSJNEb Oryza sativa (j... 176 1e-041
gb|CB657871.1|CB657871 OSJNEc13I06.r OSJNEc Oryza sativa (j... 176 1e-041
gb|CF322854.1|CF322854 HDN--02-E04.g1 OsHDAC1-overexpressin... 176 1e-041
gb|CB667560.1|CB667560 OSJNEd14P03.r OSJNEd Oryza sativa (j... 168 3e-039
gb|CB657181.1|CB657181 OSJNEc12F03.r OSJNEc Oryza sativa (j... 167 1e-038
gb|CB669054.1|CB669054 OSJNEe01E06.r OSJNEe Oryza sativa (j... 167 1e-038
gb|CB672286.1|CB672286 OSJNEe06D23.r OSJNEe Oryza sativa (j... 167 1e-038
gb|CB663093.1|CB663093 OSJNEd07L03.r OSJNEd Oryza sativa (j... 163 2e-037
gb|CB657223.1|CB657223 OSJNEc12G05.r OSJNEc Oryza sativa (j... 159 3e-036
gb|CB673345.1|CB673345 OSJNEe07N04.r OSJNEe Oryza sativa (j... 159 3e-036
gb|CB673658.1|CB673658 OSJNEe08E17.r OSJNEe Oryza sativa (j... 159 3e-036
gb|CB677076.1|CB677076 OSJNEe13L03.f OSJNEe Oryza sativa (j... 157 1e-035
gb|C72284.1|C72284 C72284 Rice panicle at flowering stage O... 155 5e-035
gb|CB677077.1|CB677077 OSJNEe13L03.r OSJNEe Oryza sativa (j... 155 5e-035
gb|CB644338.1|CB644338 OSJNEb05I01.r OSJNEb Oryza sativa (j... 151 8e-034
gb|AACV01002243.1| Oryza sativa (japonica cultivar-group) c... 145 5e-032
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 145 5e-032
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 145 5e-032
dbj|AP003453.3| Oryza sativa (japonica cultivar-group) geno... 145 5e-032
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 145 5e-032
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 145 5e-032
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 145 5e-032
gb|CB652280.1|CB652280 OSJNEc02A02.r OSJNEc Oryza sativa (j... 127 1e-026
gb|AU077443.1|AU077443 AU077443 Rice callus Oryza sativa (j... 121 7e-025
gb|CB636432.1|CB636432 OSJNEa01O24.r OSJNEa Oryza sativa (j... 115 4e-023
gb|CB662001.1|CB662001 OSJNEd05J09.r OSJNEd Oryza sativa (j... 111 7e-022
gb|CB663056.1|CB663056 OSJNEd07J17.f OSJNEd Oryza sativa (j... 109 3e-021
gb|CB663057.1|CB663057 OSJNEd07J17.r OSJNEd Oryza sativa (j... 109 3e-021
gb|C96813.1|C96813 C96813 Rice callus Oryza sativa (japonic... 101 6e-019
gb|AU097088.1|AU097088 AU097088 Rice shoot Oryza sativa (ja... 101 6e-019
gb|CB639197.1|CB639197 OSJNEa08L11.r OSJNEa Oryza sativa (j... 72 6e-010
gb|CB660780.1|CB660780 OSJNEd02N17.f OSJNEd Oryza sativa (j... 56 3e-005
gb|AU108618.1|AU108618 AU108618 Rice callus Oryza sativa (j... 54 1e-004
dbj|AK121625.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AACV01007766.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|XM_469490.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC087181.9| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|D39014.1|D39014 RICR0675A Rice root Oryza sativa (japoni... 44 0.13
gb|D39046.1|D39046 RICR1037A Rice root Oryza sativa (japoni... 44 0.13
gb|AU069846.1|AU069846 AU069846 Rice panicle at flowering s... 44 0.13
gb|AU091339.1|AU091339 AU091339 Rice panicle shorter than 3... 44 0.13
gb|AU164600.1|AU164600 AU164600 Rice root Oryza sativa (jap... 44 0.13
gb|CF299245.1|CF299245 7LEAF--03-D03.b1 Rice leaf plasmid c... 44 0.13
gb|CF299246.1|CF299246 7LEAF--03-D03.g1 Rice leaf plasmid c... 44 0.13
gb|CF299262.1|CF299262 7LEAF--03-D11.g1 Rice leaf plasmid c... 44 0.13
gb|CF300423.1|CF300423 7LEAF--04-M24.g1 Rice leaf plasmid c... 44 0.13
gb|CF301182.1|CF301182 7LEAF--05-O23.g1 Rice leaf plasmid c... 44 0.13
gb|CF301323.1|CF301323 7LEAF--06-C11.b1 Rice leaf plasmid c... 44 0.13
gb|CF310289.1|CF310289 ABF--04-N19.g1 ABF3-overexpressing t... 44 0.13
gb|CF314961.1|CF314961 HD--03-L05.b1 OsHDAC1-overexpressing... 44 0.13
gb|CF316060.1|CF316060 HD--05-D09.b1 OsHDAC1-overexpressing... 44 0.13
gb|CF316061.1|CF316061 HD--05-D09.g1 OsHDAC1-overexpressing... 44 0.13
gb|CF316569.1|CF316569 HD--05-O12.g1 OsHDAC1-overexpressing... 44 0.13
gb|CF317044.1|CF317044 HD--06-J11.b1 OsHDAC1-overexpressing... 44 0.13
gb|CF317045.1|CF317045 HD--06-J11.g1 OsHDAC1-overexpressing... 44 0.13
gb|CF319210.1|CF319210 HD--09-K05.b1 OsHDAC1-overexpressing... 44 0.13
gb|CF319211.1|CF319211 HD--09-K05.g1 OsHDAC1-overexpressing... 44 0.13
gb|CF329204.1|CF329204 NACL--04-H03.g1 Rice callus plasmid ... 44 0.13
gb|CF329261.1|CF329261 NACL--04-I09.b1 Rice callus plasmid ... 44 0.13
gb|CF329262.1|CF329262 NACL--04-I09.g1 Rice callus plasmid ... 44 0.13
gb|CV728928.1|CV728928 FLO--01-I02.b1 Rice flower lambda ph... 44 0.13
gb|CV729506.1|CV729506 FLO--02-H03.b1 Rice flower lambda ph... 44 0.13
gb|CV729712.1|CV729712 FLO--02-N18.b1 Rice flower lambda ph... 44 0.13
gb|CV730426.1|CV730426 FLO--03-P09.b1 Rice flower lambda ph... 44 0.13
gb|CV730709.1|CV730709 FLO--04-G09.b1 Rice flower lambda ph... 44 0.13
gb|CV730787.1|CV730787 FLO--04-I07.b1 Rice flower lambda ph... 44 0.13
gb|CV731362.1|CV731362 FLO--05-F21.b1 Rice flower lambda ph... 44 0.13
gb|CV731550.1|CV731550 FLO--05-K03.b1 Rice flower lambda ph... 44 0.13
gb|CV731843.1|CV731843 FLO--06-A21.b1 Rice flower lambda ph... 44 0.13
gb|CV731993.1|CV731993 FLO--06-E10.b1 Rice flower lambda ph... 44 0.13
gb|CV731994.1|CV731994 FLO--06-E10.g1 Rice flower lambda ph... 44 0.13
gb|CV732194.1|CV732194 FLO--06-J01.b1 Rice flower lambda ph... 44 0.13
gb|CV732195.1|CV732195 FLO--06-J01.g1 Rice flower lambda ph... 44 0.13
gb|CV732575.1|CV732575 FLO--07-B21.b1 Rice flower lambda ph... 44 0.13
gb|CV732576.1|CV732576 FLO--07-B21.g1 Rice flower lambda ph... 44 0.13
gb|CV732615.1|CV732615 FLO--07-C19.b1 Rice flower lambda ph... 44 0.13
gb|CV732950.1|CV732950 FLO--07-K13.g1 Rice flower lambda ph... 44 0.13
gb|CV733424.1|CV733424 FLO--08-F09.b1 Rice flower lambda ph... 44 0.13
gb|CV733425.1|CV733425 FLO--08-F09.g1 Rice flower lambda ph... 44 0.13
dbj|AK121735.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.13
dbj|AP002871.2| Oryza sativa (japonica cultivar-group) geno... 44 0.13
gb|AACV01000831.1| Oryza sativa (japonica cultivar-group) c... 44 0.13
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 44 0.13
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
>gb|CB650079.1|CB650079 OSJNEb14F12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14F12 3', mRNA sequence
Length = 876
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 544 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 603
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 604 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 663
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 664 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 723
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 724 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 783
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 784 gcacttgacatgaatggtatg 804
>gb|CB660781.1|CB660781 OSJNEd02N17.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02N17 3', mRNA sequence
Length = 844
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 582 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 641
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 642 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 701
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 702 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 761
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 762 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 821
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 822 gcacttgacatgaatggtatg 842
>gb|CB662978.1|CB662978 OSJNEd07H14.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H14 5', mRNA sequence
Length = 808
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 654 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 595
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 594 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 535
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 534 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 475
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 474 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 415
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 414 gcacttgacatgaatggtatg 394
>gb|CB663092.1|CB663092 OSJNEd07L03.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07L03 5', mRNA sequence
Length = 834
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 441 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 382
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 381 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 322
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 321 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 262
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 261 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 202
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 201 gcacttgacatgaatggtatg 181
>gb|CB665389.1|CB665389 OSJNEd11M06.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11M06 5', mRNA sequence
Length = 815
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 597 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 538
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 537 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 478
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 477 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 418
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 417 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 358
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 357 gcacttgacatgaatggtatg 337
>gb|CB665390.1|CB665390 OSJNEd11M06.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11M06 3', mRNA sequence
Length = 890
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 534 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 593
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 594 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 653
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 654 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 713
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 714 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 773
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 774 gcacttgacatgaatggtatg 794
>gb|CB675652.1|CB675652 OSJNEe11I08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11I08 3', mRNA sequence
Length = 815
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 414 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 473
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 474 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 533
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 534 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 593
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 594 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 653
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 654 gcacttgacatgaatggtatg 674
>gb|CF321633.1|CF321633 HD--12-P07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-P07, mRNA sequence
Length = 612
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 412 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 353
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 352 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 293
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 292 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 233
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 232 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 173
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 172 gcacttgacatgaatggtatg 152
>gb|CF322768.1|CF322768 HDN--02-A06.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-A06, mRNA sequence
Length = 539
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 430 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 371
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 370 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 311
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 310 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 251
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 250 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 191
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 190 gcacttgacatgaatggtatg 170
>dbj|AK062155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H12, full
insert sequence
Length = 1692
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1149 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 1090
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 1089 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 1030
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 1029 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 970
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 969 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 910
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 909 gcacttgacatgaatggtatg 889
>dbj|AK068005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130E06, full
insert sequence
Length = 1843
Score = 190 bits (96), Expect = 9e-046
Identities = 218/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1266 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 1207
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 1206 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 1147
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 1146 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 1087
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 1086 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 1027
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 1026 gcacttgacatgaatggtatg 1006
>gb|CF310830.1|CF310830 ABF--05-L11.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-L11, mRNA sequence
Length = 698
Score = 188 bits (95), Expect = 3e-045
Identities = 217/260 (83%)
Strand = Plus / Minus
Query: 576 cttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatgg 635
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 477 cttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatgg 418
Query: 636 aactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatca 695
|||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | |||
Sbjct: 417 aactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtca 358
Query: 696 caggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtca 755
|||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 357 caggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtcg 298
Query: 756 caaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcagg 815
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || || |
Sbjct: 297 cagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaag 238
Query: 816 cactttacatgaatggtatg 835
||||| ||||||||||||||
Sbjct: 237 cacttgacatgaatggtatg 218
>gb|CF311216.1|CF311216 ABF--06-F17.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-F17, mRNA sequence
Length = 606
Score = 188 bits (95), Expect = 3e-045
Identities = 217/260 (83%)
Strand = Plus / Minus
Query: 576 cttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatgg 635
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 384 cttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatgg 325
Query: 636 aactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatca 695
|||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | |||
Sbjct: 324 aactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtca 265
Query: 696 caggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtca 755
|||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 264 caggcgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtcg 205
Query: 756 caaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcagg 815
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || || |
Sbjct: 204 cagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaag 145
Query: 816 cactttacatgaatggtatg 835
||||| ||||||||||||||
Sbjct: 144 cacttgacatgaatggtatg 125
>gb|CB674460.1|CB674460 OSJNEe09I08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09I08 3', mRNA sequence
Length = 762
Score = 186 bits (94), Expect = 1e-044
Identities = 216/259 (83%)
Strand = Plus / Plus
Query: 577 ttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatgga 636
|||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 404 ttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatgga 463
Query: 637 actgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatcac 696
||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||||
Sbjct: 464 actgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtcac 523
Query: 697 aggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtcac 756
||| |||||| | ||||| || ||| ||| | || |||||||||||||||||||| |
Sbjct: 524 aggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtcgc 583
Query: 757 aaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcaggc 816
| || || || |||||||| ||||| ||||| ||||||| | | ||| || || ||
Sbjct: 584 agacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaagc 643
Query: 817 actttacatgaatggtatg 835
|||| ||||||||||||||
Sbjct: 644 acttgacatgaatggtatg 662
>gb|CB660390.1|CB660390 OSJNEd02B07.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02B07 3', mRNA sequence
Length = 796
Score = 184 bits (93), Expect = 5e-044
Identities = 189/221 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 544 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 603
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 604 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 663
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 664 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 723
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagt 795
|| || || || |||||||| ||||| ||||| |||||||
Sbjct: 724 gcagacagatttagagcaaagcgggcaagcaaattggcagt 764
>gb|CB665634.1|CB665634 OSJNEd12C17.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12C17 3', mRNA sequence
Length = 877
Score = 184 bits (93), Expect = 5e-044
Identities = 189/221 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 625 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 684
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 685 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 744
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 745 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 804
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagt 795
|| || || || |||||||| ||||| ||||| |||||||
Sbjct: 805 gcagacagatttagagcaaagcgggcaagcaaattggcagt 845
>gb|CB672596.1|CB672596 OSJNEe06L08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06L08 3', mRNA sequence
Length = 816
Score = 184 bits (93), Expect = 5e-044
Identities = 189/221 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 568 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 627
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 628 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 687
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 688 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 747
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagt 795
|| || || || |||||||| ||||| ||||| |||||||
Sbjct: 748 gcagacagatttagagcaaagcgggcaagcaaattggcagt 788
>ref|NM_191787.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 900
Score = 184 bits (93), Expect = 5e-044
Identities = 212/254 (83%)
Strand = Plus / Minus
Query: 582 atctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatggaactgc 641
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 896 atctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatggaactgc 837
Query: 642 acatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatcacaggag 701
|| |||||| ||||||| || |||||||| |||||||| |||||||| | ||||||| |
Sbjct: 836 acctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtcacaggtg 777
Query: 702 tcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtcacaaacc 761
||||| | ||||| || ||| ||| | || |||||||||||||||||||| || ||
Sbjct: 776 tcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtcgcagaca 717
Query: 762 gacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcaggcacttt 821
|| || |||||||| ||||| ||||| ||||||| | | ||| || || ||||||
Sbjct: 716 gatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaagcacttg 657
Query: 822 acatgaatggtatg 835
||||||||||||||
Sbjct: 656 acatgaatggtatg 643
>gb|AY574990.1| Oryza sativa (japonica cultivar-group) zinc finger protein (Tranpr)
mRNA, complete cds
Length = 1393
Score = 182 bits (92), Expect = 2e-043
Identities = 217/261 (83%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 959 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 900
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | |
Sbjct: 899 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgcc 840
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 839 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 780
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcag 814
|| || || || |||||||| ||||| ||||| ||||||| | | ||| || ||
Sbjct: 779 gcagacagatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaa 720
Query: 815 gcactttacatgaatggtatg 835
|||||| ||||||||||||||
Sbjct: 719 gcacttgacatgaatggtatg 699
>gb|CB660299.1|CB660299 OSJNEd01O12.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01O12 3', mRNA sequence
Length = 824
Score = 180 bits (91), Expect = 8e-043
Identities = 187/219 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 606 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 665
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 666 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 725
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 726 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 785
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggca 793
|| || || || |||||||| ||||| ||||| |||||
Sbjct: 786 gcagacagatttagagcaaagcgggcaagcaaattggca 824
>gb|CB662979.1|CB662979 OSJNEd07H14.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H14 3', mRNA sequence
Length = 828
Score = 180 bits (91), Expect = 8e-043
Identities = 187/219 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 610 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 669
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 670 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 729
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 730 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 789
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggca 793
|| || || || |||||||| ||||| ||||| |||||
Sbjct: 790 gcagacagatttagagcaaagcgggcaagcaaattggca 828
>gb|CB668340.1|CB668340 OSJNEd16C12.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16C12 3', mRNA sequence
Length = 853
Score = 180 bits (91), Expect = 8e-043
Identities = 187/219 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 635 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 694
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 695 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 754
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 755 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 814
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggca 793
|| || || || |||||||| ||||| ||||| |||||
Sbjct: 815 gcagacagatttagagcaaagcgggcaagcaaattggca 853
>gb|CB672730.1|CB672730 OSJNEe06O16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06O16 3', mRNA sequence
Length = 852
Score = 178 bits (90), Expect = 3e-042
Identities = 186/218 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 635 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 694
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 695 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 754
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 755 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 814
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggc 792
|| || || || |||||||| ||||| ||||| ||||
Sbjct: 815 gcagacagatttagagcaaagcgggcaagcaaattggc 852
>gb|CB643754.1|CB643754 OSJNEb04J24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04J24 3', mRNA sequence
Length = 855
Score = 176 bits (89), Expect = 1e-041
Identities = 188/221 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 621 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 680
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 681 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 740
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 741 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 800
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagt 795
|| || || || |||||||| |||| ||||| |||||||
Sbjct: 801 gcagacagatttagagcaaagcgggccagcaaattggcagt 841
>gb|CB657871.1|CB657871 OSJNEc13I06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13I06 3', mRNA sequence
Length = 794
Score = 176 bits (89), Expect = 1e-041
Identities = 188/221 (85%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 544 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 603
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 604 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 663
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | | ||||||||||||||||||||
Sbjct: 664 acaggtgtcagatatcgttgctagttcctcgtccaatttctcccatgccttcgacatgtc 723
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagt 795
|| || || || |||||||| ||||| ||||| |||||||
Sbjct: 724 gcagacagatttagagcaaagcgggcaagcaaattggcagt 764
>gb|CF322854.1|CF322854 HDN--02-E04.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-E04, mRNA sequence
Length = 646
Score = 176 bits (89), Expect = 1e-041
Identities = 208/250 (83%)
Strand = Plus / Minus
Query: 586 ggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatggaactgcacat 645
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 646 ggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatggaactgcacct 587
Query: 646 ctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatcacaggagtcag 705
||||| ||||||| || |||||||| |||||||| |||||||| | ||||||| |||||
Sbjct: 586 ctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtcacaggtgtcag 527
Query: 706 acagagttgccagctccatgtcgagcctttcccatgccttcgacatgtcacaaaccgact 765
| | ||||| || ||| ||| | || |||||||||||||||||||| || || || |
Sbjct: 526 atatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtcgcagacagatt 467
Query: 766 tggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcaggcactttacat 825
| |||||||| ||||| ||||| ||||||| | | ||| || || |||||| ||||
Sbjct: 466 tagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaagcacttgacat 407
Query: 826 gaatggtatg 835
||||||||||
Sbjct: 406 gaatggtatg 397
>gb|CB667560.1|CB667560 OSJNEd14P03.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14P03 3', mRNA sequence
Length = 671
Score = 168 bits (85), Expect = 3e-039
Identities = 187/221 (84%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 369 acttcaaatctggcgggggttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 428
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 429 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 488
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| | || | | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 489 acagggggcaaatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 548
Query: 755 acaaaccgacttggagcaaagggggcatgcaaactggcagt 795
|||| || || |||||||| ||||| ||||| |||||||
Sbjct: 549 gcaaaaagatttagagcaaagcgggcaagcaaattggcagt 589
>gb|CB657181.1|CB657181 OSJNEc12F03.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12F03 3', mRNA sequence
Length = 801
Score = 167 bits (84), Expect = 1e-038
Identities = 156/180 (86%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 583 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 642
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 643 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 702
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 703 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 762
>gb|CB669054.1|CB669054 OSJNEe01E06.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E06 3', mRNA sequence
Length = 833
Score = 167 bits (84), Expect = 1e-038
Identities = 156/180 (86%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 626 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 685
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 686 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 745
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtc 754
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||||
Sbjct: 746 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtc 805
>gb|CB672286.1|CB672286 OSJNEe06D23.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06D23 3', mRNA sequence
Length = 830
Score = 167 bits (84), Expect = 1e-038
Identities = 120/132 (90%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 662 acttcaaatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 721
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 722 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 781
Query: 695 acaggagtcaga 706
||||| ||||||
Sbjct: 782 acaggtgtcaga 793
>gb|CB663093.1|CB663093 OSJNEd07L03.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07L03 3', mRNA sequence
Length = 787
Score = 163 bits (82), Expect = 2e-037
Identities = 154/178 (86%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 584 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 643
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 644 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 703
Query: 695 acaggagtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatg 752
||||| |||||| | ||||| || ||| ||| | || ||||||||||||||||||
Sbjct: 704 acaggtgtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatg 761
>gb|CB657223.1|CB657223 OSJNEc12G05.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12G05 3', mRNA sequence
Length = 812
Score = 159 bits (80), Expect = 3e-036
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 633 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 692
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 693 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 752
Query: 695 acaggagtcaga 706
||||| ||||||
Sbjct: 753 acaggtgtcaga 764
>gb|CB673345.1|CB673345 OSJNEe07N04.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07N04 3', mRNA sequence
Length = 753
Score = 159 bits (80), Expect = 3e-036
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 583 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 642
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 643 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 702
Query: 695 acaggagtcaga 706
||||| ||||||
Sbjct: 703 acaggtgtcaga 714
>gb|CB673658.1|CB673658 OSJNEe08E17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08E17 3', mRNA sequence
Length = 778
Score = 159 bits (80), Expect = 3e-036
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 612 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 671
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| |||||||| | ||
Sbjct: 672 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccattttattgtc 731
Query: 695 acaggagtcaga 706
||||| ||||||
Sbjct: 732 acaggtgtcaga 743
>gb|CB677076.1|CB677076 OSJNEe13L03.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe13L03 5', mRNA sequence
Length = 806
Score = 157 bits (79), Expect = 1e-035
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 600 gacttgcaattctggcacttgtgcgcaatcaaatggaactgcacatctgatattgccccg 659
|||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 803 gacttgcacttctggcacttgtgcgcaatcaaatggaactgcacctctgatgttgcccca 744
Query: 660 cagtcgttgcataatatgcggaccattttgtgatcacaggagtcagacagagttgccagc 719
|| |||||||| |||||||| |||||||| | ||||||| |||||| | ||||| ||
Sbjct: 743 caatcgttgcacaatatgcgcaccattttattgtcacaggtgtcagatatcgttgctagt 684
Query: 720 tccatgtcgagcctttcccatgccttcgacatgtcacaaaccgacttggagcaaaggggg 779
||| ||| | || |||||||||||||||||||| || || || || |||||||| |||
Sbjct: 683 tcctcgtccaatctctcccatgccttcgacatgtcgcagacagatttagagcaaagcggg 624
Query: 780 catgcaaactggcagtncncnnnnattnctttcaggcactttacatgaatggtatg 835
|| ||||| ||||||| | | ||| || || |||||| ||||||||||||||
Sbjct: 623 caagcaaattggcagtgctcctccatttctcgcaagcacttgacatgaatggtatg 568
>gb|C72284.1|C72284 C72284 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1361_1A, mRNA sequence
Length = 461
Score = 155 bits (78), Expect = 5e-035
Identities = 211/255 (82%), Gaps = 2/255 (0%)
Strand = Plus / Minus
Query: 582 atctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatggaactgc 641
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 418 atctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatggaactgc 359
Query: 642 acatctgatattg-ccccgcagtcgttgcataatatgcggaccattttgtgatcacagga 700
|| |||||| ||| |||| || ||| |||| |||||||| |||||||| | |||||||
Sbjct: 358 acctctgatgttgcccccacaatcg-tgcacaatatgcgcaccattttattgtcacaggt 300
Query: 701 gtcagacagagttgccagctccatgtcgagcctttcccatgccttcgacatgtcacaaac 760
|||||| | ||||| || ||| ||| | || |||||||||||||||||||| || ||
Sbjct: 299 gtcagatatcgttgctagttcctcgtccaatctctcccatgccttcgacatgtcgcagac 240
Query: 761 cgacttggagcaaagggggcatgcaaactggcagtncncnnnnattnctttcaggcactt 820
|| || |||||||| ||||| ||||| ||||||| | | ||| || || ||||||
Sbjct: 239 agatttagagcaaagcgggcaagcaaattggcagtgctcctccatttctcgcaagcactt 180
Query: 821 tacatgaatggtatg 835
||||||||||||||
Sbjct: 179 gacatgaatggtatg 165
>gb|CB677077.1|CB677077 OSJNEe13L03.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe13L03 3', mRNA sequence
Length = 821
Score = 155 bits (78), Expect = 5e-035
Identities = 105/114 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 657 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 716
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccatttt 688
||||||||| |||||| ||||||| || |||||||| |||||||| ||||||||
Sbjct: 717 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgcaccatttt 770
>gb|CB644338.1|CB644338 OSJNEb05I01.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05I01 3', mRNA sequence
Length = 739
Score = 151 bits (76), Expect = 8e-034
Identities = 118/132 (89%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 573 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 632
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcggaccattttgtgatc 694
||||||||| |||||| ||||||| || |||||||| |||||||| ||||||| | ||
Sbjct: 633 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcgccccattttattgtc 692
Query: 695 acaggagtcaga 706
||||| ||||||
Sbjct: 693 acaggtgtcaga 704
>gb|AACV01002243.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002243, whole
genome shotgun sequence
Length = 46304
Score = 145 bits (73), Expect = 5e-032
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 39814 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 39873
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcg 679
||||||||| |||||| ||||||| || |||||||| ||||||||
Sbjct: 39874 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcg 39918
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 735 tcccatgccttcgacatgtcacaaaccgacttggagcaaagggggcatgcaaa 787
|||||||||||||||||||| || || || || |||||||| ||||| |||||
Sbjct: 40230 tcccatgccttcgacatgtcgcagacagatttagagcaaagcgggcaagcaaa 40282
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 145 bits (73), Expect = 5e-032
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 30039816 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 30039875
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcg 679
||||||||| |||||| ||||||| || |||||||| ||||||||
Sbjct: 30039876 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcg 30039920
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 735 tcccatgccttcgacatgtcacaaaccgacttggagcaaagggggcatgcaaa 787
|||||||||||||||||||| || || || || |||||||| ||||| |||||
Sbjct: 30040232 tcccatgccttcgacatgtcgcagacagatttagagcaaagcgggcaagcaaa 30040284
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 235 gccgccgccgccgttcaaccgc 256
||||||||||||||||||||||
Sbjct: 11247080 gccgccgccgccgttcaaccgc 11247059
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 145 bits (73), Expect = 5e-032
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 4487199 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 4487258
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcg 679
||||||||| |||||| ||||||| || |||||||| ||||||||
Sbjct: 4487259 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcg 4487303
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 735 tcccatgccttcgacatgtcacaaaccgacttggagcaaagggggcatgcaaa 787
|||||||||||||||||||| || || || || |||||||| ||||| |||||
Sbjct: 4487615 tcccatgccttcgacatgtcgcagacagatttagagcaaagcgggcaagcaaa 4487667
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0480C01
Length = 151100
Score = 145 bits (73), Expect = 5e-032
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 103704 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 103763
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcg 679
||||||||| |||||| ||||||| || |||||||| ||||||||
Sbjct: 103764 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcg 103808
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 735 tcccatgccttcgacatgtcacaaaccgacttggagcaaagggggcatgcaaa 787
|||||||||||||||||||| || || || || |||||||| ||||| |||||
Sbjct: 104120 tcccatgccttcgacatgtcgcagacagatttagagcaaagcgggcaagcaaa 104172
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 145 bits (73), Expect = 5e-032
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 4421386 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 4421445
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcg 679
||||||||| |||||| ||||||| || |||||||| ||||||||
Sbjct: 4421446 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcg 4421490
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 735 tcccatgccttcgacatgtcacaaaccgacttggagcaaagggggcatgcaaa 787
|||||||||||||||||||| || || || || |||||||| ||||| |||||
Sbjct: 4421802 tcccatgccttcgacatgtcgcagacagatttagagcaaagcgggcaagcaaa 4421854
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 145 bits (73), Expect = 5e-032
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 29623107 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 29623166
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcg 679
||||||||| |||||| ||||||| || |||||||| ||||||||
Sbjct: 29623167 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcg 29623211
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 735 tcccatgccttcgacatgtcacaaaccgacttggagcaaagggggcatgcaaa 787
|||||||||||||||||||| || || || || |||||||| ||||| |||||
Sbjct: 29623523 tcccatgccttcgacatgtcgcagacagatttagagcaaagcgggcaagcaaa 29623575
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 235 gccgccgccgccgttcaaccgc 256
||||||||||||||||||||||
Sbjct: 11417851 gccgccgccgccgttcaaccgc 11417830
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 145 bits (73), Expect = 5e-032
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 29959146 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 29959205
Query: 635 gaactgcacatctgatattgccccgcagtcgttgcataatatgcg 679
||||||||| |||||| ||||||| || |||||||| ||||||||
Sbjct: 29959206 gaactgcacctctgatgttgccccacaatcgttgcacaatatgcg 29959250
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 735 tcccatgccttcgacatgtcacaaaccgacttggagcaaagggggcatgcaaa 787
|||||||||||||||||||| || || || || |||||||| ||||| |||||
Sbjct: 29959562 tcccatgccttcgacatgtcgcagacagatttagagcaaagcgggcaagcaaa 29959614
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 235 gccgccgccgccgttcaaccgc 256
||||||||||||||||||||||
Sbjct: 11249298 gccgccgccgccgttcaaccgc 11249277
>gb|CB652280.1|CB652280 OSJNEc02A02.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02A02 3', mRNA sequence
Length = 599
Score = 127 bits (64), Expect = 1e-026
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 501 acttcagatctggcgggtgttgaaggacttgcacttctggcacttgtgcgcaatcaaatg 560
Query: 635 gaactgcacatctgatattgccccgcagtcgttgca 670
||||||||| |||||| ||||||| || ||||||||
Sbjct: 561 gaactgcacctctgatgttgccccacaatcgttgca 596
>gb|AU077443.1|AU077443 AU077443 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12946_8Z, mRNA sequence
Length = 713
Score = 121 bits (61), Expect = 7e-025
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 107 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 48
Query: 635 gaactgcacatctgatattgcccc 658
|||||||| |||||| |||||||
Sbjct: 47 gaactgcanctctgatgttgcccc 24
>gb|CB636432.1|CB636432 OSJNEa01O24.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01O24 3', mRNA sequence
Length = 643
Score = 115 bits (58), Expect = 4e-023
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 578 acttcaaatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 637
Query: 635 gaactg 640
||||||
Sbjct: 638 gaactg 643
>gb|CB662001.1|CB662001 OSJNEd05J09.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05J09 3', mRNA sequence
Length = 911
Score = 111 bits (56), Expect = 7e-022
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 835 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 894
Query: 635 gaactgcacatctgat 650
||||||| | ||||||
Sbjct: 895 gaactgcccctctgat 910
>gb|CB663056.1|CB663056 OSJNEd07J17.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07J17 5', mRNA sequence
Length = 653
Score = 109 bits (55), Expect = 3e-021
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 575 acttcaaatctggcgggtgttgtatgacttgcaattctggcacttgtgcgcaatcaaatg 634
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 67 acttcagatctggcgggtgttgtaggacttgcacttctggcacttgtgcgcaatcaaatg 8
Query: 635 gaactgc 641
|||||||
Sbjct: 7 gaactgc 1
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,008,117
Number of Sequences: 438736
Number of extensions: 3008117
Number of successful extensions: 177422
Number of sequences better than 0.5: 112
Number of HSP's better than 0.5 without gapping: 114
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 173828
Number of HSP's gapped (non-prelim): 3563
length of query: 880
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 859
effective length of database: 2,791,206,460
effective search space: 2397646349140
effective search space used: 2397646349140
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)