BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161295.2.1
(1475 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA... 827 0.0
dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-... 827 0.0
gb|CB661724.1|CB661724 OSJNEd05A04.r OSJNEd Oryza sativa (j... 686 0.0
gb|CB646118.1|CB646118 OSJNEb08F06.f OSJNEb Oryza sativa (j... 583 e-163
gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydr... 557 e-156
dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA... 557 e-156
dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA... 557 e-156
dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-... 557 e-156
gb|CF303741.1|CF303741 ABF1--03-B12.g1 ABF3-overexpressing ... 529 e-147
dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-... 468 e-129
dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA... 438 e-120
gb|CB661723.1|CB661723 OSJNEd05A04.f OSJNEd Oryza sativa (j... 424 e-116
gb|CB653220.1|CB653220 OSJNEc04A21.f OSJNEc Oryza sativa (j... 410 e-112
gb|CB646119.1|CB646119 OSJNEb08F06.r OSJNEb Oryza sativa (j... 396 e-107
gb|CF323550.1|CF323550 HDN--04-C09.g1 OsHDAC1-overexpressin... 394 e-107
gb|CB654313.1|CB654313 OSJNEc06H06.f OSJNEc Oryza sativa (j... 391 e-106
dbj|AK099614.1| Oryza sativa (japonica cultivar-group) cDNA... 353 2e-094
gb|AC135929.2| Oryza sativa (japonica cultivar-group) chrom... 305 4e-080
gb|AACV01011960.1| Oryza sativa (japonica cultivar-group) c... 305 4e-080
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 305 4e-080
gb|CH401205.1| Oryza sativa (japonica cultivar-group) chrom... 305 4e-080
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 305 4e-080
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 305 4e-080
gb|CB653221.1|CB653221 OSJNEc04A21.r OSJNEc Oryza sativa (j... 289 2e-075
gb|CB674716.1|CB674716 OSJNEe09O17.r OSJNEe Oryza sativa (j... 287 9e-075
gb|AU225848.1|AU225848 AU225848 Oryza sativa Koshihikari pi... 283 1e-073
gb|CB666956.1|CB666956 OSJNEd14B05.r OSJNEd Oryza sativa (j... 272 5e-070
gb|CB654314.1|CB654314 OSJNEc06H06.r OSJNEc Oryza sativa (j... 252 5e-064
dbj|AP004343.2| Oryza sativa (japonica cultivar-group) geno... 252 5e-064
dbj|AP006268.4| Oryza sativa (japonica cultivar-group) geno... 252 5e-064
gb|AACV01017003.1| Oryza sativa (japonica cultivar-group) c... 252 5e-064
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 252 5e-064
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 252 5e-064
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 252 5e-064
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 252 5e-064
gb|CF311240.1|CF311240 ABF--06-G05.b1 ABF3-overexpressing t... 224 1e-055
gb|CB663751.1|CB663751 OSJNEd09B06.f OSJNEd Oryza sativa (j... 190 1e-045
dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA... 176 2e-041
dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-... 176 2e-041
gb|CB685001.1|CB685001 OSJNEf15A20.r OSJNEf Oryza sativa (j... 170 1e-039
dbj|AP003535.2| Oryza sativa (japonica cultivar-group) geno... 170 1e-039
gb|AACV01000881.1| Oryza sativa (japonica cultivar-group) c... 170 1e-039
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 170 1e-039
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 170 1e-039
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 170 1e-039
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 170 1e-039
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 170 1e-039
gb|AU173448.1|AU173448 AU173448 Rice root Oryza sativa (jap... 159 5e-036
gb|CA758797.1|CA758797 BR030021000_PLATE_A07_49_051.ab1 OA ... 117 2e-023
gb|CF330800.1|CF330800 NACL--06-K19.b1 Rice callus plasmid ... 117 2e-023
gb|CA999040.1|CA999040 S234M_D01 Rice cold stress germinati... 115 7e-023
gb|CB656571.1|CB656571 OSJNEc11B09.r OSJNEc Oryza sativa (j... 101 1e-018
dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA... 101 1e-018
dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA... 101 1e-018
dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-... 101 1e-018
ref|NM_190499.1| Oryza sativa (japonica cultivar-group), p... 101 1e-018
gb|CF323882.1|CF323882 HDN--05-A09.g1 OsHDAC1-overexpressin... 100 4e-018
gb|AU173188.1|AU173188 AU173188 Rice root Oryza sativa (jap... 92 1e-015
gb|AACV01017002.1| Oryza sativa (japonica cultivar-group) c... 92 1e-015
gb|CB674715.1|CB674715 OSJNEe09O17.f OSJNEe Oryza sativa (j... 70 4e-009
gb|AACV01002640.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 68 1e-008
dbj|AP003271.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|CB662804.1|CB662804 OSJNEd07C16.f OSJNEd Oryza sativa (j... 62 9e-007
gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbar... 60 4e-006
gb|AACV01006352.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 60 4e-006
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CX728359.1|CX728359 OSJNEf05A21.r OSJNEf Oryza sativa (j... 46 0.054
gb|CB000697.1|CB000697 S345J_B09 Rice cold stress germinati... 42 0.85
dbj|AP006720.1| Oryza sativa (japonica cultivar-group) geno... 40 3.3
dbj|AP004049.2| Oryza sativa (japonica cultivar-group) geno... 40 3.3
dbj|AP004851.3| Oryza sativa (japonica cultivar-group) geno... 40 3.3
gb|AACV01003164.1| Oryza sativa (japonica cultivar-group) c... 40 3.3
gb|AACV01013034.1| Oryza sativa (japonica cultivar-group) c... 40 3.3
dbj|AP003632.3| Oryza sativa (japonica cultivar-group) geno... 40 3.3
dbj|AP004806.3| Oryza sativa (japonica cultivar-group) geno... 40 3.3
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 40 3.3
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 40 3.3
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 40 3.3
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 40 3.3
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 40 3.3
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 40 3.3
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 40 3.3
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 40 3.3
>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full
insert sequence
Length = 1734
Score = 827 bits (417), Expect = 0.0
Identities = 609/673 (90%)
Strand = Plus / Minus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 1465 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 1406
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 1405 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 1346
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 1345 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 1286
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 1285 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 1226
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacata 654
|||||| || ||||| |||||||| ||| |||||| ||||||||||||||||| |||||
Sbjct: 1225 tggccctacgtgctcaccttccatgagcctcatcaatccctcaaccagatcagagacata 1166
Query: 655 ttggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgc 714
||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||| ||
Sbjct: 1165 ttggaaactcctggtctgcttgccatcaccgtaaaccgtcaaaggctccttcctcaaagc 1106
Query: 715 ctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgt 774
||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1105 ctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatgt 1046
Query: 775 attgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaa 834
||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1045 gttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtcaa 986
Query: 835 cgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacatt 894
||||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 985 agtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaatggggttgacatt 926
Query: 895 gccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
|||||||||||||||||| || || ||||| || |||||||| |||||||||||||| ||
Sbjct: 925 gccccagtaagtctccacttgaggatgctgtaggggatcaccgtagacctcactggtgct 866
Query: 955 ggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaac 1014
|||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||
Sbjct: 865 ggtgaggaggaacctggcattgatcctcttcgccaatccgagcatgttgagagtcccaac 806
Query: 1015 cacattggtcttg 1027
|||||||||||||
Sbjct: 805 cacattggtcttg 793
>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1555
Score = 827 bits (417), Expect = 0.0
Identities = 609/673 (90%)
Strand = Plus / Minus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 1391 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 1332
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 1331 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 1272
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 1271 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 1212
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 1211 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 1152
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacata 654
|||||| || ||||| |||||||| ||| |||||| ||||||||||||||||| |||||
Sbjct: 1151 tggccctacgtgctcaccttccatgagcctcatcaatccctcaaccagatcagagacata 1092
Query: 655 ttggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgc 714
||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||| ||
Sbjct: 1091 ttggaaactcctggtctgcttgccatcaccgtaaaccgtcaaaggctccttcctcaaagc 1032
Query: 715 ctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgt 774
||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1031 ctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatgt 972
Query: 775 attgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaa 834
||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 971 gttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtcaa 912
Query: 835 cgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacatt 894
||||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 911 agtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaatggggttgacatt 852
Query: 895 gccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
|||||||||||||||||| || || ||||| || |||||||| |||||||||||||| ||
Sbjct: 851 gccccagtaagtctccacttgaggatgctgtaggggatcaccgtagacctcactggtgct 792
Query: 955 ggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaac 1014
|||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||
Sbjct: 791 ggtgaggaggaacctggcattgatcctcttcgccaatccgagcatgttgagagtcccaac 732
Query: 1015 cacattggtcttg 1027
|||||||||||||
Sbjct: 731 cacattggtcttg 719
>gb|CB661724.1|CB661724 OSJNEd05A04.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A04 3', mRNA sequence
Length = 831
Score = 686 bits (346), Expect = 0.0
Identities = 505/558 (90%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 260 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 319
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 320 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 379
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 380 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 439
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 440 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 499
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacata 654
|||||| || ||||| |||||||| ||| |||||| ||||||||||||||||| |||||
Sbjct: 500 tggccctacgtgctcaccttccatgagcctcatcaatccctcaaccagatcagagacata 559
Query: 655 ttggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgc 714
||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||| ||
Sbjct: 560 ttggaaactcctggtctgcttgccatcaccgtaaaccgtcaaaggctccttcctcaaagc 619
Query: 715 ctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgt 774
||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 620 ctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatgt 679
Query: 775 attgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaa 834
||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 680 gttgaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtcaa 739
Query: 835 cgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacatt 894
||||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 740 agtttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaatggggttgacatt 799
Query: 895 gccccagtaagtctccac 912
||||||||||||||||||
Sbjct: 800 gccccagtaagtctccac 817
>gb|CB646118.1|CB646118 OSJNEb08F06.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08F06 5', mRNA sequence
Length = 778
Score = 583 bits (294), Expect = e-163
Identities = 411/450 (91%)
Strand = Plus / Minus
Query: 578 gggttacccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctca 637
||||||||||||||||||||||| || ||||| | |||||| ||| |||||| ||||||
Sbjct: 778 gggttacccaggttgaatggccctacgtgctcactttccatgagcgtcatcaatccctca 719
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 718 accagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgtcaaa 659
Query: 698 ggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcac 757
||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 658 ggctccttcctcaaagcctgagcaacaaagttgctgacaacacggccatcatcgatgcac 599
Query: 758 atgcgagggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacgg 817
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 598 atgcgagggccatatgtgttgaagatacgagcgatcctaacctcaaggttggcaccacgg 539
Query: 818 tggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgaca 877
|| || ||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||
Sbjct: 538 tgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaactcctcaca 479
Query: 878 ccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacca 937
|| ||||| |||||||||||||||||||||||||| || || ||||| || ||||||||
Sbjct: 478 ccaatggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatcaccg 419
Query: 938 tagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagc 997
|||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 418 tagacctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatccgagc 359
Query: 998 atgttcagagtcccaaccacattggtcttg 1027
||||| ||||||||||||||||||||||||
Sbjct: 358 atgttgagagtcccaaccacattggtcttg 329
>gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydratase-like protein mRNA, partial
cds
Length = 773
Score = 557 bits (281), Expect = e-156
Identities = 572/669 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 688 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 629
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 628 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 569
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 568 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 509
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 508 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 449
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | ||||| |||||||||| |||||| || || |||| |||||| ||||||||
Sbjct: 448 cctatgtgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattga 389
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 388 aagctcctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctga 329
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 328 gcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatgtgtta 269
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
|| || || || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatggtcaacgtt 209
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|||||||| |||||||||||||| || ||||| || ||||| ||||| ||||||||||||
Sbjct: 208 tcagctgtgcgcttgccctcatcatagcagcttctaacaccaatggggttgacattgccc 149
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 148 cagtaagtctccacctgagggtgctggaggggatctccatatacctcactggtgctggtg 89
Query: 959 aggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccaca 1018
||||| || | || |||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 88 aggagaaattttgccccaatcctcttggccaatccaagcatgttcagtgtcccaaccacg 29
Query: 1019 ttggtcttg 1027
|||||||||
Sbjct: 28 ttggtcttg 20
>dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G06, full
insert sequence
Length = 1057
Score = 557 bits (281), Expect = e-156
Identities = 572/669 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 693 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 634
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 633 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 574
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 573 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 514
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 513 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 454
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | ||||| |||||||||| |||||| || || |||| |||||| ||||||||
Sbjct: 453 cctatgtgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattga 394
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 393 aagctcctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctga 334
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 333 gcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatgtgtta 274
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
|| || || || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatggtcaacgtt 214
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|||||||| |||||||||||||| || ||||| || ||||| ||||| ||||||||||||
Sbjct: 213 tcagctgtgcgcttgccctcatcatagcagcttctaacaccaatggggttgacattgccc 154
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 153 cagtaagtctccacctgagggtgctggaggggatctccatatacctcactggtgctggtg 94
Query: 959 aggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccaca 1018
||||| || | || |||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 93 aggagaaattttgccccaatcctcttggccaatccaagcatgttcagtgtcccaaccacg 34
Query: 1019 ttggtcttg 1027
|||||||||
Sbjct: 33 ttggtcttg 25
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full
insert sequence
Length = 1820
Score = 557 bits (281), Expect = e-156
Identities = 572/669 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1418 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 1359
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 1358 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 1299
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 1298 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 1239
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 1238 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 1179
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | ||||| |||||||||| |||||| || || |||| |||||| ||||||||
Sbjct: 1178 cctatgtgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattga 1119
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 1118 aagctcctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctga 1059
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 1058 gcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatgtgtta 999
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
|| || || || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 aaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatggtcaacgtt 939
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|||||||| |||||||||||||| || ||||| || ||||| ||||| ||||||||||||
Sbjct: 938 tcagctgtgcgcttgccctcatcatagcagcttctaacaccaatggggttgacattgccc 879
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 878 cagtaagtctccacctgagggtgctggaggggatctccatatacctcactggtgctggtg 819
Query: 959 aggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccaca 1018
||||| || | || |||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 818 aggagaaattttgccccaatcctcttggccaatccaagcatgttcagtgtcccaaccacg 759
Query: 1019 ttggtcttg 1027
|||||||||
Sbjct: 758 ttggtcttg 750
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1336
Score = 557 bits (281), Expect = e-156
Identities = 572/669 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1291 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 1232
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 1231 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 1172
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 1171 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 1112
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 1111 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 1052
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | ||||| |||||||||| |||||| || || |||| |||||| ||||||||
Sbjct: 1051 cctatgtgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattga 992
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 991 aagctcctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctga 932
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 931 gcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatgtgtta 872
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
|| || || || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 aaaatccgagcaatcctcacctcaaggttggcaccacggtggtaatccatggtcaacgtt 812
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|||||||| |||||||||||||| || ||||| || ||||| ||||| ||||||||||||
Sbjct: 811 tcagctgtgcgcttgccctcatcatagcagcttctaacaccaatggggttgacattgccc 752
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 751 cagtaagtctccacctgagggtgctggaggggatctccatatacctcactggtgctggtg 692
Query: 959 aggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccaca 1018
||||| || | || |||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 691 aggagaaattttgccccaatcctcttggccaatccaagcatgttcagtgtcccaaccacg 632
Query: 1019 ttggtcttg 1027
|||||||||
Sbjct: 631 ttggtcttg 623
>gb|CF303741.1|CF303741 ABF1--03-B12.g1 ABF3-overexpressing transgenic rice lambda phage cDNA
library (ABF1) Oryza sativa (japonica cultivar-group)
cDNA clone ABF1--03-B12, mRNA sequence
Length = 552
Score = 529 bits (267), Expect = e-147
Identities = 362/394 (91%)
Strand = Plus / Minus
Query: 634 ctcaaccagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgt 693
||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 552 ctcaaccagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgt 493
Query: 694 caagggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaat 753
||| ||||||||||||| |||||||||||| |||| ||||||||||||||||| || ||
Sbjct: 492 caaaggctccttcctcaaagcctgagcaacanagttgctgacaacacggccatcatcgat 433
Query: 754 gcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcacc 813
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 432 gcacatgcgagggccatatgtgttgaagatacgagcgatcctaacctcaaggttggcacc 373
Query: 814 acggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcct 873
|||||| || ||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 372 acggtgatagtccatggtcaaagtttcagctgtgcgcttgccctcatcgtaacaactcct 313
Query: 874 gacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatc 933
||||| ||||| |||||||||||||||||||||||||| || || ||||| || |||||
Sbjct: 312 cacaccaatggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatc 253
Query: 934 accatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatcc 993
||| |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||
Sbjct: 252 accgtagacctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatcc 193
Query: 994 gagcatgttcagagtcccaaccacattggtcttg 1027
||||||||| ||||||||||||||||||||||||
Sbjct: 192 gagcatgttgagagtcccaaccacattggtcttg 159
>dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-6 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1498
Score = 468 bits (236), Expect = e-129
Identities = 515/608 (84%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 1369 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 1310
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 1309 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 1250
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 1249 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 1190
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1189 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 1130
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| || ||||| ||||||||||||||||||| ||||| |||||||| || || || |||
Sbjct: 1129 cctacgtgctccccttccatcagcttcatcaacccctccaccagatcggagacgtactgg 1070
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| || || || || |||||||||||||||||||||||||||||
Sbjct: 1069 aagctcctcgtctgcttaccgtcgccgtacaccgtcaagggctccttcctcagtgcctgg 1010
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
|| |||||||| ||||| || ||||||||||| |||||||| || ||||| || || |||
Sbjct: 1009 gcgacaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttg 950
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| || || ||||| ||||| |||||||| ||||||||||| |||||||||| ||
Sbjct: 949 aagatccgagcaatcctcacctcgaggttggcgccacggtggtagtccatggtcagtgtc 890
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || || | ||| ||||| ||||| ||||| || || |||||||| ||||| ||||||
Sbjct: 889 tccgccgtcctcttcccctcgtcgtagcagcttctcaccccgatggggttgacgttgccc 830
Query: 899 cagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtg 958
||||| ||||| ||||| ||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 829 cagtaggtctcgacctgggggtgctggagcgggtcgccgtagacctcgctggtgctggtg 770
Query: 959 aggaggaa 966
||||||||
Sbjct: 769 aggaggaa 762
>dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138E11, full
insert sequence
Length = 2031
Score = 438 bits (221), Expect = e-120
Identities = 482/569 (84%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 1677 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 1618
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 1617 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 1558
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 1557 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 1498
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1497 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 1438
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| || ||||| ||||||||||||||||||| ||||| |||||||| || || || |||
Sbjct: 1437 cctacgtgctccccttccatcagcttcatcaacccctccaccagatcggagacgtactgg 1378
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| || || || || |||||||||||||||||||||||||||||
Sbjct: 1377 aagctcctcgtctgcttaccgtcgccgtacaccgtcaagggctccttcctcagtgcctgg 1318
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
|| |||||||| ||||| || ||||||||||| |||||||| || ||||| || || |||
Sbjct: 1317 gcgacaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttg 1258
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtt 838
||||| || || ||||| ||||| |||||||| ||||||||||| |||||||||| ||
Sbjct: 1257 aagatccgagcaatcctcacctcgaggttggcgccacggtggtagtccatggtcagtgtc 1198
Query: 839 tcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccc 898
|| || || | ||| ||||| ||||| ||||| || || |||||||| ||||| ||||||
Sbjct: 1197 tccgccgtcctcttcccctcgtcgtagcagcttctcaccccgatggggttgacgttgccc 1138
Query: 899 cagtaagtctccacctgcgggtgctggag 927
||||| ||||| ||||| |||||||||||
Sbjct: 1137 cagtaggtctcgacctgggggtgctggag 1109
>gb|CB661723.1|CB661723 OSJNEd05A04.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A04 5', mRNA sequence
Length = 720
Score = 424 bits (214), Expect = e-116
Identities = 286/310 (92%)
Strand = Plus / Minus
Query: 718 agcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtatt 777
|||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 720 agcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatgtgtt 661
Query: 778 gaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgt 837
||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 660 gaagatacgagcgatcctaacctcaaggttggcaccacggtgatagtccatggtcaaagt 601
Query: 838 ttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcc 897
||||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 600 ttcagctgtgcgcttgccctcatcgtaacaactcctcacaccaatggggttgacattgcc 541
Query: 898 ccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggt 957
||||||||||||||| || || ||||| || |||||||| |||||||||||||| |||||
Sbjct: 540 ccagtaagtctccacttgaggatgctgcaggggatcaccgtagacctcactggtgctggt 481
Query: 958 gaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccac 1017
||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 480 gaggaggaacctggcattgatcctcttcgccaatccgagcatgttgagagtcccaaccac 421
Query: 1018 attggtcttg 1027
||||||||||
Sbjct: 420 attggtcttg 411
>gb|CB653220.1|CB653220 OSJNEc04A21.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04A21 5', mRNA sequence
Length = 762
Score = 410 bits (207), Expect = e-112
Identities = 369/423 (87%)
Strand = Plus / Minus
Query: 605 tgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactc 664
||||| |||||||||| |||||| || || |||| |||||| |||||||| || |||
Sbjct: 755 tgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattgaaagctc 696
Query: 665 ctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaaca 724
|| || ||||| ||||||||||| || ||||| || ||||||||||||||||||||||||
Sbjct: 695 ctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctgagcaaca 636
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| ||||||||||||||||| ||||||||||||||||| |||||||| || || ||
Sbjct: 635 aagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatgtgttaaaaatc 576
Query: 785 cgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 844
|| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cgagcaatcctcacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagct 516
Query: 845 gtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaa 904
|| |||||||||||||| || ||||| || ||||| ||||| ||||||||||||||||||
Sbjct: 515 gtgcgcttgccctcatcatagcagcttctaacaccaatggggttgacattgccccagtaa 456
Query: 905 gtctccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggagg 964
||||||||||| ||||||||||| ||||| ||||| ||||||||||| |||||||||||
Sbjct: 455 gtctccacctgagggtgctggaggggatctccatatacctcactggtgctggtgaggaga 396
Query: 965 aacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtc 1024
|| | || |||||||| || ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 395 aattttgccccaatcctcttggccaatccaagcatgttcagtgtcccaaccacgttggtc 336
Query: 1025 ttg 1027
|||
Sbjct: 335 ttg 333
>gb|CB646119.1|CB646119 OSJNEb08F06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08F06 3', mRNA sequence
Length = 797
Score = 396 bits (200), Expect = e-107
Identities = 314/352 (89%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 446 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 505
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 506 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 565
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 566 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 625
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 626 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 685
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacata 654
|||||| || ||||| |||||||| ||| |||||| ||||||||||||||||| |||||
Sbjct: 686 tggccctacgtgctcaccttccatgagcctcatcaatccctcaaccagatcagagacata 745
Query: 655 ttggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttc 706
||||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 746 ttggaaactcctggtctgcttgccatcaccgtaaaccgtcaaaggctccttc 797
>gb|CF323550.1|CF323550 HDN--04-C09.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-C09, mRNA sequence
Length = 615
Score = 394 bits (199), Expect = e-107
Identities = 406/475 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 498 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 439
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 438 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 379
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 378 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 319
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 318 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 259
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| || ||||| ||||||||||||||||||| ||||| |||||||| || || || |||
Sbjct: 258 cctacgtgctccccttccatcagcttcatcaacccctccaccagatcggagacgtactgg 199
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| || || || || |||||||||||||||||||||||||||||
Sbjct: 198 aagctcctcgtctgcttaccgtcgccgtacaccgtcaagggctccttcctcagtgcctgg 139
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
|| |||||||| ||||| || ||||||||||| |||||||| || ||||| || || |||
Sbjct: 138 gcgacaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttg 79
Query: 779 aagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtca 833
||||| || || ||||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 78 aagatccgagcaatcctcacctcgaggttggcgccacggtggtagtccatggtca 24
>gb|CB654313.1|CB654313 OSJNEc06H06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc06H06 5', mRNA sequence
Length = 784
Score = 391 bits (197), Expect = e-106
Identities = 431/509 (84%)
Strand = Plus / Minus
Query: 458 ctgatgtcgggcttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgt 517
|||||||| ||||| ||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 784 ctgatgtccggcttccgcttgtgcgggtcgtcggcggtgttcggcctgaactcgatccgc 725
Query: 518 gcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgcca 577
||||| ||||||||||||||||| || |||||||||||||| ||||| |||||||| ||
Sbjct: 724 gcgtttgggtcgatggtgtcctgcaccaccttggcaagctccagcattgtgaactcccct 665
Query: 578 gggttacccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctca 637
||||| ||||||||||||||||| || ||||| ||||||||||||||||||| |||||
Sbjct: 664 gggtttcccaggttgaatggccctacgtgctccccttccatcagcttcatcaacccctcc 605
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 604 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 545
Query: 698 ggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcac 757
|||||||||||||||||||| || |||||||| ||||| || ||||||||||| ||||||
Sbjct: 544 ggctccttcctcagtgcctgggcgacaaagttgctgacgacccggccatcgtcgatgcac 485
Query: 758 atgcgagggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacgg 817
|| || ||||| || || |||||||| || || ||||| ||||| |||||||| ||||||
Sbjct: 484 atacgggggccgtaggtgttgaagatccgagcaatcctcacctcgaggttggcgccacgg 425
Query: 818 tggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgaca 877
||||| |||||||||| || || || || | ||| ||||| ||||| ||||| || ||
Sbjct: 424 tggtagtccatggtcagtgtctccgccgtcctcttcccctcgtcgtagcagcttctcacc 365
Query: 878 ccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacca 937
|||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 364 ccgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagcgggtcgccg 305
Query: 938 tagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 304 tagacctcgctggtgctggtgaggaggaa 276
>dbj|AK099614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050E02, full
insert sequence
Length = 1965
Score = 353 bits (178), Expect = 2e-094
Identities = 376/442 (85%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 1508 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 1449
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 1448 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 1389
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 1388 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 1329
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1328 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 1269
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| || ||||| ||||||||||||||||||| ||||| |||||||| || || || |||
Sbjct: 1268 cctacgtgctccccttccatcagcttcatcaacccctccaccagatcggagacgtactgg 1209
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| || || || || |||||||||||||||||||||||||||||
Sbjct: 1208 aagctcctcgtctgcttaccgtcgccgtacaccgtcaagggctccttcctcagtgcctgg 1149
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattg 778
|| |||||||| ||||| || ||||||||||| |||||||| || ||||| || || |||
Sbjct: 1148 gcgacaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttg 1089
Query: 779 aagatacgtgcgatcctaacct 800
||||| || || ||||| ||||
Sbjct: 1088 aagatccgagcaatcctcacct 1067
Score = 127 bits (64), Expect = 2e-026
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgc 854
||||||| |||||||| ||||||||||| |||||||||| || || || || | ||| |
Sbjct: 802 taacctcgaggttggcgccacggtggtagtccatggtcagtgtctccgccgtcctcttcc 743
Query: 855 cctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacct 914
|||| ||||| ||||| || || |||||||| ||||| ||||||||||| ||||| ||||
Sbjct: 742 cctcgtcgtagcagcttctcaccccgatggggttgacgttgccccagtaggtctcgacct 683
Query: 915 gcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaa 966
| ||||||||||| || || || |||||||| ||||| ||||||||||||||
Sbjct: 682 gggggtgctggagcgggtcgccgtagacctcgctggtgctggtgaggaggaa 631
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
complete sequence
Length = 164064
Score = 305 bits (154), Expect = 4e-080
Identities = 253/286 (88%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 143798 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 143857
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 143858 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 143917
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 143918 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 143977
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 143978 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 144037
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaacc 640
|||||| || ||||| |||||||| ||| |||||| |||||||||
Sbjct: 144038 tggccctacgtgctcaccttccatgagcctcatcaatccctcaacc 144083
Score = 224 bits (113), Expect = 1e-055
Identities = 155/169 (91%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| |||||||||||||||||||||||||| || || ||||| || |||||||| |||
Sbjct: 145491 atggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatcaccgtag 145550
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 145551 acctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatccgagcatg 145610
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
|| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 145611 ttgagagtcccaaccacattggtcttgtgccatctcaaaggttaaggct 145659
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 144435 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 144494
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||||||||| |||||||||||||
Sbjct: 144495 tgttgaagatacgagcgatcctaacct 144521
Score = 117 bits (59), Expect = 2e-023
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 144616 acctcaaggttggcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccc 144675
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| ||||| |||||
Sbjct: 144676 tcatcgtaacaactcctcacacc 144698
Score = 105 bits (53), Expect = 7e-020
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 144262 accagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgtcaaa 144321
Query: 698 ggctccttcctca 710
|||||||||||||
Sbjct: 144322 ggctccttcctca 144334
Score = 52.0 bits (26), Expect = 9e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1176 gtgaagtgaacagtaagcgaagttgcttagaaag 1209
|||||||||||||||||| |||||| ||||||||
Sbjct: 145834 gtgaagtgaacagtaagcaaagttggttagaaag 145867
>gb|AACV01011960.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011960, whole
genome shotgun sequence
Length = 33954
Score = 305 bits (154), Expect = 4e-080
Identities = 253/286 (88%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 9623 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 9682
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 9683 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 9742
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 9743 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 9802
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 9803 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 9862
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaacc 640
|||||| || ||||| |||||||| ||| |||||| |||||||||
Sbjct: 9863 tggccctacgtgctcaccttccatgagcctcatcaatccctcaacc 9908
Score = 224 bits (113), Expect = 1e-055
Identities = 155/169 (91%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| |||||||||||||||||||||||||| || || ||||| || |||||||| |||
Sbjct: 11316 atggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatcaccgtag 11375
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 11376 acctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatccgagcatg 11435
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
|| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 11436 ttgagagtcccaaccacattggtcttgtgccatctcaaaggttaaggct 11484
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 10260 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 10319
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||||||||| |||||||||||||
Sbjct: 10320 tgttgaagatacgagcgatcctaacct 10346
Score = 117 bits (59), Expect = 2e-023
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 10441 acctcaaggttggcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccc 10500
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| ||||| |||||
Sbjct: 10501 tcatcgtaacaactcctcacacc 10523
Score = 105 bits (53), Expect = 7e-020
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 10087 accagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgtcaaa 10146
Query: 698 ggctccttcctca 710
|||||||||||||
Sbjct: 10147 ggctccttcctca 10159
Score = 52.0 bits (26), Expect = 9e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1176 gtgaagtgaacagtaagcgaagttgcttagaaag 1209
|||||||||||||||||| |||||| ||||||||
Sbjct: 11659 gtgaagtgaacagtaagcaaagttggttagaaag 11692
>ref|NT_107210.1| Oryza sativa (japonica cultivar-group)
Length = 1353368
Score = 305 bits (154), Expect = 4e-080
Identities = 253/286 (88%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 193030 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 193089
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 193090 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 193149
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 193150 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 193209
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 193210 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 193269
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaacc 640
|||||| || ||||| |||||||| ||| |||||| |||||||||
Sbjct: 193270 tggccctacgtgctcaccttccatgagcctcatcaatccctcaacc 193315
Score = 224 bits (113), Expect = 1e-055
Identities = 155/169 (91%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| |||||||||||||||||||||||||| || || ||||| || |||||||| |||
Sbjct: 194723 atggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatcaccgtag 194782
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 194783 acctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatccgagcatg 194842
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
|| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 194843 ttgagagtcccaaccacattggtcttgtgccatctcaaaggttaaggct 194891
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 193667 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 193726
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||||||||| |||||||||||||
Sbjct: 193727 tgttgaagatacgagcgatcctaacct 193753
Score = 117 bits (59), Expect = 2e-023
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 193848 acctcaaggttggcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccc 193907
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| ||||| |||||
Sbjct: 193908 tcatcgtaacaactcctcacacc 193930
Score = 105 bits (53), Expect = 7e-020
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 193494 accagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgtcaaa 193553
Query: 698 ggctccttcctca 710
|||||||||||||
Sbjct: 193554 ggctccttcctca 193566
Score = 52.0 bits (26), Expect = 9e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1176 gtgaagtgaacagtaagcgaagttgcttagaaag 1209
|||||||||||||||||| |||||| ||||||||
Sbjct: 195066 gtgaagtgaacagtaagcaaagttggttagaaag 195099
>gb|CH401205.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000042 genomic
scaffold, whole genome shotgun sequence
Length = 2493951
Score = 305 bits (154), Expect = 4e-080
Identities = 253/286 (88%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 2081353 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 2081412
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 2081413 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 2081472
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 2081473 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 2081532
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 2081533 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 2081592
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaacc 640
|||||| || ||||| |||||||| ||| |||||| |||||||||
Sbjct: 2081593 tggccctacgtgctcaccttccatgagcctcatcaatccctcaacc 2081638
Score = 224 bits (113), Expect = 1e-055
Identities = 155/169 (91%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| |||||||||||||||||||||||||| || || ||||| || |||||||| |||
Sbjct: 2083046 atggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatcaccgtag 2083105
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 2083106 acctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatccgagcatg 2083165
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
|| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 2083166 ttgagagtcccaaccacattggtcttgtgccatctcaaaggttaaggct 2083214
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 2081990 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 2082049
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||||||||| |||||||||||||
Sbjct: 2082050 tgttgaagatacgagcgatcctaacct 2082076
Score = 117 bits (59), Expect = 2e-023
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 2082171 acctcaaggttggcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccc 2082230
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| ||||| |||||
Sbjct: 2082231 tcatcgtaacaactcctcacacc 2082253
Score = 105 bits (53), Expect = 7e-020
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 2081817 accagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgtcaaa 2081876
Query: 698 ggctccttcctca 710
|||||||||||||
Sbjct: 2081877 ggctccttcctca 2081889
Score = 52.0 bits (26), Expect = 9e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1176 gtgaagtgaacagtaagcgaagttgcttagaaag 1209
|||||||||||||||||| |||||| ||||||||
Sbjct: 2083389 gtgaagtgaacagtaagcaaagttggttagaaag 2083422
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 305 bits (154), Expect = 4e-080
Identities = 253/286 (88%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 16887615 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 16887674
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 16887675 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 16887734
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 16887735 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 16887794
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 16887795 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 16887854
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaacc 640
|||||| || ||||| |||||||| ||| |||||| |||||||||
Sbjct: 16887855 tggccctacgtgctcaccttccatgagcctcatcaatccctcaacc 16887900
Score = 224 bits (113), Expect = 1e-055
Identities = 155/169 (91%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| |||||||||||||||||||||||||| || || ||||| || |||||||| |||
Sbjct: 16889308 atggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatcaccgtag 16889367
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 16889368 acctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatccgagcatg 16889427
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
|| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 16889428 ttgagagtcccaaccacattggtcttgtgccatctcaaaggttaaggct 16889476
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 16888252 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 16888311
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||||||||| |||||||||||||
Sbjct: 16888312 tgttgaagatacgagcgatcctaacct 16888338
Score = 117 bits (59), Expect = 2e-023
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 16888433 acctcaaggttggcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccc 16888492
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| ||||| |||||
Sbjct: 16888493 tcatcgtaacaactcctcacacc 16888515
Score = 105 bits (53), Expect = 7e-020
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 16888079 accagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgtcaaa 16888138
Query: 698 ggctccttcctca 710
|||||||||||||
Sbjct: 16888139 ggctccttcctca 16888151
Score = 52.0 bits (26), Expect = 9e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1176 gtgaagtgaacagtaagcgaagttgcttagaaag 1209
|||||||||||||||||| |||||| ||||||||
Sbjct: 16889651 gtgaagtgaacagtaagcaaagttggttagaaag 16889684
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 305 bits (154), Expect = 4e-080
Identities = 253/286 (88%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 17199663 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 17199722
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 17199723 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 17199782
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 17199783 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 17199842
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 17199843 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 17199902
Query: 595 tggccccacatgctcgccttccatcagcttcatcagaccctcaacc 640
|||||| || ||||| |||||||| ||| |||||| |||||||||
Sbjct: 17199903 tggccctacgtgctcaccttccatgagcctcatcaatccctcaacc 17199948
Score = 224 bits (113), Expect = 1e-055
Identities = 155/169 (91%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| |||||||||||||||||||||||||| || || ||||| || |||||||| |||
Sbjct: 17201356 atggggttgacattgccccagtaagtctccacttgaggatgctgcaggggatcaccgtag 17201415
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 17201416 acctcactggtgctggtgaggaggaacctggcattgatcctcttcgccaatccgagcatg 17201475
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
|| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 17201476 ttgagagtcccaaccacattggtcttgtgccatctcaaaggttaaggct 17201524
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 17200300 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 17200359
Query: 774 tattgaagatacgtgcgatcctaacct 800
| ||||||||||| |||||||||||||
Sbjct: 17200360 tgttgaagatacgagcgatcctaacct 17200386
Score = 117 bits (59), Expect = 2e-023
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 17200481 acctcaaggttggcaccacggtgatagtccatggtcaaagtttcagctgtgcgcttgccc 17200540
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| ||||| |||||
Sbjct: 17200541 tcatcgtaacaactcctcacacc 17200563
Score = 105 bits (53), Expect = 7e-020
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 17200127 accagatcagagacatattggaaactcctggtctgcttgccatcaccgtaaaccgtcaaa 17200186
Query: 698 ggctccttcctca 710
|||||||||||||
Sbjct: 17200187 ggctccttcctca 17200199
Score = 52.0 bits (26), Expect = 9e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1176 gtgaagtgaacagtaagcgaagttgcttagaaag 1209
|||||||||||||||||| |||||| ||||||||
Sbjct: 17201699 gtgaagtgaacagtaagcaaagttggttagaaag 17201732
>gb|CB653221.1|CB653221 OSJNEc04A21.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04A21 3', mRNA sequence
Length = 782
Score = 289 bits (146), Expect = 2e-075
Identities = 338/402 (84%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 440
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 441 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 500
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 501 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 560
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 561 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 620
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | ||||| |||||||||| |||||| || || |||| |||||| ||||||||
Sbjct: 621 cctatgtgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattga 680
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 681 aagctcctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctga 740
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatg 760
||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 741 gcaacaaagttgctgacaacacggccatcatcaatgcacatg 782
>gb|CB674716.1|CB674716 OSJNEe09O17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09O17 3', mRNA sequence
Length = 788
Score = 287 bits (145), Expect = 9e-075
Identities = 337/401 (84%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 388 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 447
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 448 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 507
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 508 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 567
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 568 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 627
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | ||||| |||||||||| |||||| || || |||| |||||| ||||||||
Sbjct: 628 cctatgtgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattga 687
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 688 aagctcctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctga 747
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacat 759
||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 748 gcaacaaagttgctgacaacacggccatcatcaatgcacat 788
>gb|AU225848.1|AU225848 AU225848 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0879, mRNA sequence
Length = 552
Score = 283 bits (143), Expect = 1e-073
Identities = 227/255 (89%)
Strand = Plus / Plus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 294 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 353
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 354 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 413
Query: 475 cttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggt 534
|||||||||||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 414 cttgtgcgggtcgtcctgggtgttgggacggaactcgatctttgcgttagggtcgatggt 473
Query: 535 gtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
|||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 474 gtcctggacaaccttggccagctccagcatggtgaactcaccagggttacccaggttgaa 533
Query: 595 tggccccacatgctc 609
|||||| || |||||
Sbjct: 534 tggccctacgtgctc 548
>gb|CB666956.1|CB666956 OSJNEd14B05.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14B05 3', mRNA sequence
Length = 784
Score = 272 bits (137), Expect = 5e-070
Identities = 326/389 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 392 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 451
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 452 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 511
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 512 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 571
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 572 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 631
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| | ||||| |||||||||| |||||| || || |||| |||||| ||||||||
Sbjct: 632 cctatgtgctccccttccatcaagctcatcaacccttccaccaaatcagagacatattga 691
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
|| ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 692 aagctcctagtctgcttgccatcaccatagacagtcaaaggttccttcctcagtgcctga 751
Query: 719 gcaacaaagttactgacaacacggccatc 747
||||||||||| |||||||||||||||||
Sbjct: 752 gcaacaaagttgctgacaacacggccatc 780
>gb|CB654314.1|CB654314 OSJNEc06H06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc06H06 3', mRNA sequence
Length = 834
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 555 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 614
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 615 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 674
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 675 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 734
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 735 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 794
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 795 cctacgtgctccccttccatcagcttcatca 825
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0618H09
Length = 142306
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 1525 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 1466
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 1465 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 1406
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 1405 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 1346
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1345 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 1286
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 1285 cctacgtgctccccttccatcagcttcatca 1255
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 798 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 739
Query: 698 ggctccttcctcagtgcctg 717
||||||||||||||||||||
Sbjct: 738 ggctccttcctcagtgcctg 719
Score = 46.1 bits (23), Expect = 0.054
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggcc 768
|||||||| ||||| || ||||||||||| |||||||| || |||||
Sbjct: 59 acaaagttgctgacgacccggccatcgtcgatgcacatacgggggcc 13
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0037D09
Length = 140470
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 9736 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 9677
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 9676 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 9617
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 9616 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 9557
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 9556 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 9497
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 9496 cctacgtgctccccttccatcagcttcatca 9466
Score = 91.7 bits (46), Expect = 1e-015
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 7741 accgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagcgggtcgcc 7682
Query: 937 atagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 7681 gtagacctcgctggtgctggtgaggaggaa 7652
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 9009 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 8950
Query: 698 ggctccttcctcagtgcctg 717
||||||||||||||||||||
Sbjct: 8949 ggctccttcctcagtgcctg 8930
Score = 54.0 bits (27), Expect = 2e-004
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaag 781
|||||||| ||||| || ||||||||||| |||||||| || ||||| || || ||||||
Sbjct: 8270 acaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttgaag 8211
Query: 782 atacgtgcgatcctaacct 800
|| || || ||||| ||||
Sbjct: 8210 atccgagcaatcctcacct 8192
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 7927 taacctcgaggttggcgccacggtggtagtccatggtca 7889
>gb|AACV01017003.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg017003, whole
genome shotgun sequence
Length = 12138
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 10182 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 10241
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 10242 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 10301
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 10302 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 10361
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 10362 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 10421
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 10422 cctacgtgctccccttccatcagcttcatca 10452
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 10909 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 10968
Query: 698 ggctccttcctcagtgcctg 717
||||||||||||||||||||
Sbjct: 10969 ggctccttcctcagtgcctg 10988
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 11991 taacctcgaggttggcgccacggtggtagtccatggtca 12029
Score = 54.0 bits (27), Expect = 2e-004
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaag 781
|||||||| ||||| || ||||||||||| |||||||| || ||||| || || ||||||
Sbjct: 11648 acaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttgaag 11707
Query: 782 atacgtgcgatcctaacct 800
|| || || ||||| ||||
Sbjct: 11708 atccgagcaatcctcacct 11726
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 16056989 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 16056930
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 16056929 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 16056870
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 16056869 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 16056810
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 16056809 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 16056750
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 16056749 cctacgtgctccccttccatcagcttcatca 16056719
Score = 91.7 bits (46), Expect = 1e-015
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 16054994 accgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagcgggtcgcc 16054935
Query: 937 atagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 16054934 gtagacctcgctggtgctggtgaggaggaa 16054905
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 16056262 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 16056203
Query: 698 ggctccttcctcagtgcctg 717
||||||||||||||||||||
Sbjct: 16056202 ggctccttcctcagtgcctg 16056183
Score = 54.0 bits (27), Expect = 2e-004
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaag 781
|||||||| ||||| || ||||||||||| |||||||| || ||||| || || ||||||
Sbjct: 16055523 acaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttgaag 16055464
Query: 782 atacgtgcgatcctaacct 800
|| || || ||||| ||||
Sbjct: 16055463 atccgagcaatcctcacct 16055445
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 16055180 taacctcgaggttggcgccacggtggtagtccatggtca 16055142
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 14030159 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 14030100
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 14030099 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 14030040
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 14030039 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 14029980
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 14029979 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 14029920
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 14029919 cctacgtgctccccttccatcagcttcatca 14029889
Score = 91.7 bits (46), Expect = 1e-015
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 14026947 accgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagcgggtcgcc 14026888
Query: 937 atagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 14026887 gtagacctcgctggtgctggtgaggaggaa 14026858
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 14029432 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 14029373
Query: 698 ggctccttcctcagtgcctg 717
||||||||||||||||||||
Sbjct: 14029372 ggctccttcctcagtgcctg 14029353
Score = 54.0 bits (27), Expect = 2e-004
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaag 781
|||||||| ||||| || ||||||||||| |||||||| || ||||| || || ||||||
Sbjct: 14028693 acaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttgaag 14028634
Query: 782 atacgtgcgatcctaacct 800
|| || || ||||| ||||
Sbjct: 14028633 atccgagcaatcctcacct 14028615
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 14028350 taacctcgaggttggcgccacggtggtagtccatggtca 14028312
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 14027133 taacctcgaggttggcgccacggtggtagtccatggtca 14027095
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 27429598 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 27429539
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 27429538 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 27429479
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 27429478 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 27429419
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 27429418 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 27429359
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 27429358 cctacgtgctccccttccatcagcttcatca 27429328
Score = 91.7 bits (46), Expect = 1e-015
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 27426386 accgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagcgggtcgcc 27426327
Query: 937 atagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 27426326 gtagacctcgctggtgctggtgaggaggaa 27426297
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 27428871 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 27428812
Query: 698 ggctccttcctcagtgcctg 717
||||||||||||||||||||
Sbjct: 27428811 ggctccttcctcagtgcctg 27428792
Score = 54.0 bits (27), Expect = 2e-004
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaag 781
|||||||| ||||| || ||||||||||| |||||||| || ||||| || || ||||||
Sbjct: 27428132 acaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttgaag 27428073
Query: 782 atacgtgcgatcctaacct 800
|| || || ||||| ||||
Sbjct: 27428072 atccgagcaatcctcacct 27428054
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 27427789 taacctcgaggttggcgccacggtggtagtccatggtca 27427751
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 27426572 taacctcgaggttggcgccacggtggtagtccatggtca 27426534
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 252 bits (127), Expect = 5e-064
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 28443984 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 28443925
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 28443924 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 28443865
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
||||||||||| ||||||| | |||||||||||| ||||| |||||||||||||||
Sbjct: 28443864 tgcgggtcgtcggcggtgttcggcctgaactcgatccgcgcgtttgggtcgatggtgtcc 28443805
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|| || |||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 28443804 tgcaccaccttggcaagctccagcattgtgaactcccctgggtttcccaggttgaatggc 28443745
Query: 599 cccacatgctcgccttccatcagcttcatca 629
|| || ||||| |||||||||||||||||||
Sbjct: 28443744 cctacgtgctccccttccatcagcttcatca 28443714
Score = 91.7 bits (46), Expect = 1e-015
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 28441989 accgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagcgggtcgcc 28441930
Query: 937 atagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 28441929 gtagacctcgctggtgctggtgaggaggaa 28441900
Score = 63.9 bits (32), Expect = 2e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||||||| || || || ||||| ||||| || ||||| || || || || |||||||||
Sbjct: 28443257 accagatcggagacgtactggaagctcctcgtctgcttaccgtcgccgtacaccgtcaag 28443198
Query: 698 ggctccttcctcagtgcctg 717
||||||||||||||||||||
Sbjct: 28443197 ggctccttcctcagtgcctg 28443178
Score = 54.0 bits (27), Expect = 2e-004
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaag 781
|||||||| ||||| || ||||||||||| |||||||| || ||||| || || ||||||
Sbjct: 28442518 acaaagttgctgacgacccggccatcgtcgatgcacatacgggggccgtaggtgttgaag 28442459
Query: 782 atacgtgcgatcctaacct 800
|| || || ||||| ||||
Sbjct: 28442458 atccgagcaatcctcacct 28442440
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 28442175 taacctcgaggttggcgccacggtggtagtccatggtca 28442137
>gb|CF311240.1|CF311240 ABF--06-G05.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-G05, mRNA sequence
Length = 589
Score = 224 bits (113), Expect = 1e-055
Identities = 265/316 (83%)
Strand = Plus / Minus
Query: 459 tgatgtcgggcttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtg 518
||||||| |||||||||||||| || || ||| |||||| |||||||| || || |
Sbjct: 558 tgatgtcaggcttgcgcttgtgtggatcatccgcagtgttcggacggaactcaatgcgag 499
Query: 519 cgttggggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccag 578
| || || || |||||||||||||||||||| || ||||| |||||||||||||| || |
Sbjct: 498 cattcggatcaatggtgtcctggacaaccttagccagctccagcatggtgaactcacccg 439
Query: 579 ggttacccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaa 638
| |||| |||||| ||||| || | ||||| |||||||||| |||||| || || |
Sbjct: 438 gattacncaggttaaatggtcctatgtgctccccttccatcaagctcatcaacccttcca 379
Query: 639 ccagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagg 698
||| |||||| |||||||| || ||||| || ||||| ||||||||||| || ||||| |
Sbjct: 378 ccaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaag 319
Query: 699 gctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcaca 758
| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 318 gttccttcctcagtgcctgagcaacaaagttgctgacaacacggccatcatcaatgcaca 259
Query: 759 tgcgagggccatatgt 774
||||||| ||||||||
Sbjct: 258 tgcgaggaccatatgt 243
Score = 163 bits (82), Expect = 3e-037
Identities = 151/174 (86%)
Strand = Plus / Minus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |
Sbjct: 221 caccaatggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctc 162
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
|||| ||||||||||| ||||||||||| || | || | |||||||| || ||||| |
Sbjct: 161 catatacctcactggtgctggtgaggagaaattttgcctcaatcctcttggccaatccaa 102
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
|||||||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 101 gcatgttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 48
>gb|CB663751.1|CB663751 OSJNEd09B06.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09B06 5', mRNA sequence
Length = 722
Score = 190 bits (96), Expect = 1e-045
Identities = 171/196 (87%)
Strand = Plus / Minus
Query: 832 caacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgac 891
||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| |||||
Sbjct: 722 caacgtttcagctgtgcgcttgccctcatcatagcagcttctaacaccaatggggttgac 663
Query: 892 attgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggt 951
|||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||
Sbjct: 662 attgccccagtaagtctccacctgagggtgctggaggggatctccatatacctcactggt 603
Query: 952 actggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtccc 1011
||||||||||| || | || |||||||| || ||||| ||||||||||| |||||
Sbjct: 602 gctggtgaggagaaattttgccccaatcctcttggccaatccaagcatgttcagtgtccc 543
Query: 1012 aaccacattggtcttg 1027
|||||| |||||||||
Sbjct: 542 aaccacgttggtcttg 527
>dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I12, full
insert sequence
Length = 1604
Score = 176 bits (89), Expect = 2e-041
Identities = 380/477 (79%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
|||||||| | |||||| || || ||||| || |||| |||||| || || | ||||||
Sbjct: 1142 gcaagctctaacatggtaaattctccaggatttcccaagttgaaaggtcctatatgctca 1083
Query: 611 ccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtt 670
| ||||||||| | |||| || ||||||| ||| ||||||||||| ||||| || ||
Sbjct: 1082 ctttccatcagggttatcaatccatcaaccaaatctgaaacatattgaaaacttctagtc 1023
Query: 671 tgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagtta 730
|||||||||||||||||||| |||| |||| |||| || || |||||| || |||||
Sbjct: 1022 tgctttccatcaccataaactgtcattggctgtttccgcaatgtctgagcgacgaagttg 963
Query: 731 ctgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcg 790
|| |||||||| ||||| || | ||||| |||||||||||||| ||||| || || ||
Sbjct: 962 ctaacaacacgcccatcatctaaacacatacgagggccatatgtgttgaatattcgcgca 903
Query: 791 atcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgc 850
|| || ||||||| |||||| || |||||||||||||||| || |||||||| | |
Sbjct: 902 attctcacctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctc 843
Query: 851 ttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
|||||||| |||||||| ||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 842 ttgccctcgtcgtaacaactcctaacgcctatgggatttacatggccccagtagctctcc 783
Query: 911 acctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctg 970
||| || || | ||||||||||| || ||||||||||||||||| | | ||||| |
Sbjct: 782 ttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaaccgg 723
Query: 971 gcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|| | ||||||||| ||||| |||||||||| ||||| | |||||| ||||||
Sbjct: 722 gctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtcttg 666
>dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-1 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1303
Score = 176 bits (89), Expect = 2e-041
Identities = 380/477 (79%)
Strand = Plus / Minus
Query: 551 gcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcg 610
|||||||| | |||||| || || ||||| || |||| |||||| || || | ||||||
Sbjct: 1047 gcaagctctaacatggtaaattctccaggatttcccaagttgaaaggtcctatatgctca 988
Query: 611 ccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtt 670
| ||||||||| | |||| || ||||||| ||| ||||||||||| ||||| || ||
Sbjct: 987 ctttccatcagggttatcaatccatcaaccaaatctgaaacatattgaaaacttctagtc 928
Query: 671 tgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagtta 730
|||||||||||||||||||| |||| |||| |||| || || |||||| || |||||
Sbjct: 927 tgctttccatcaccataaactgtcattggctgtttccgcaatgtctgagcgacgaagttg 868
Query: 731 ctgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcg 790
|| |||||||| ||||| || | ||||| |||||||||||||| ||||| || || ||
Sbjct: 867 ctaacaacacgcccatcatctaaacacatacgagggccatatgtgttgaatattcgcgca 808
Query: 791 atcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgc 850
|| || ||||||| |||||| || |||||||||||||||| || |||||||| | |
Sbjct: 807 attctcacctcaacaccggcacctcgatggtaatccatggtcagagtctcagctgttctc 748
Query: 851 ttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
|||||||| |||||||| ||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 747 ttgccctcgtcgtaacaactcctaacgcctatgggatttacatggccccagtagctctcc 688
Query: 911 acctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctg 970
||| || || | ||||||||||| || ||||||||||||||||| | | ||||| |
Sbjct: 687 ttctgtggatgttcaagaggatcaccgtacacctcactggtactggtcaataagaaccgg 628
Query: 971 gcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|| | ||||||||| ||||| |||||||||| ||||| | |||||| ||||||
Sbjct: 627 gctcccaccctctttgccaatcccagcatgttcaaggtccccatcacatttgtcttg 571
>gb|CB685001.1|CB685001 OSJNEf15A20.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15A20 3', mRNA sequence
Length = 723
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 419 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 478
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 479 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 538
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 539 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 598
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 599 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 658
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 659 cctatgtgctccccttccatca 680
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1012D10
Length = 168267
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 102430 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 102489
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 102490 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 102549
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 102550 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 102609
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 102610 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 102669
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 102670 cctatgtgctccccttccatca 102691
Score = 153 bits (77), Expect = 3e-034
Identities = 146/169 (86%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 104338 atggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctccatat 104397
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| ||||||||||| || | || |||||||| || ||||| ||||||
Sbjct: 104398 acctcactggtgctggtgaggagaaattttgccccaatcctcttggccaatccaagcatg 104457
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 104458 ttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 104506
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 103470 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtgcgcttgcc 103529
Query: 856 ctcatcgtaacagctcctgacacc 879
|||||| || ||||| || |||||
Sbjct: 103530 ctcatcatagcagcttctaacacc 103553
Score = 97.6 bits (49), Expect = 2e-017
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 103294 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 103353
Query: 774 t 774
|
Sbjct: 103354 t 103354
Score = 73.8 bits (37), Expect = 2e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| |||||| |||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct: 103117 accaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaa 103176
Query: 698 ggctccttcctcagtgcctga 718
|| ||||||||||||||||||
Sbjct: 103177 ggttccttcctcagtgcctga 103197
>gb|AACV01000881.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000881, whole
genome shotgun sequence
Length = 15617
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13484 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 13425
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 13424 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 13365
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 13364 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 13305
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 13304 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 13245
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 13244 cctatgtgctccccttccatca 13223
Score = 153 bits (77), Expect = 3e-034
Identities = 146/169 (86%)
Strand = Plus / Minus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 11576 atggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctccatat 11517
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| ||||||||||| || | || |||||||| || ||||| ||||||
Sbjct: 11516 acctcactggtgctggtgaggagaaattttgccccaatcctcttggccaatccaagcatg 11457
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 11456 ttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 11408
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 12444 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtgcgcttgcc 12385
Query: 856 ctcatcgtaacagctcctgacacc 879
|||||| || ||||| || |||||
Sbjct: 12384 ctcatcatagcagcttctaacacc 12361
Score = 97.6 bits (49), Expect = 2e-017
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 12620 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 12561
Query: 774 t 774
|
Sbjct: 12560 t 12560
Score = 73.8 bits (37), Expect = 2e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| |||||| |||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct: 12797 accaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaa 12738
Query: 698 ggctccttcctcagtgcctga 718
|| ||||||||||||||||||
Sbjct: 12737 ggttccttcctcagtgcctga 12717
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11887927 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 11887986
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 11887987 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 11888046
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 11888047 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 11888106
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 11888107 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 11888166
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 11888167 cctatgtgctccccttccatca 11888188
Score = 153 bits (77), Expect = 3e-034
Identities = 146/169 (86%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 11889835 atggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctccatat 11889894
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| ||||||||||| || | || |||||||| || ||||| ||||||
Sbjct: 11889895 acctcactggtgctggtgaggagaaattttgccccaatcctcttggccaatccaagcatg 11889954
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 11889955 ttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 11890003
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11888967 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtgcgcttgcc 11889026
Query: 856 ctcatcgtaacagctcctgacacc 879
|||||| || ||||| || |||||
Sbjct: 11889027 ctcatcatagcagcttctaacacc 11889050
Score = 97.6 bits (49), Expect = 2e-017
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 11888791 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11888850
Query: 774 t 774
|
Sbjct: 11888851 t 11888851
Score = 73.8 bits (37), Expect = 2e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| |||||| |||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct: 11888614 accaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaa 11888673
Query: 698 ggctccttcctcagtgcctga 718
|| ||||||||||||||||||
Sbjct: 11888674 ggttccttcctcagtgcctga 11888694
Score = 67.9 bits (34), Expect = 1e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 35973390 accagatcagaaacatactgaaaacttctagtttgttttccatcaccataaactgtca 35973333
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||| || || || ||||||||||| || | ||||| |||||||||||||
Sbjct: 35973219 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 35973160
Query: 774 tattgaa 780
|||||||
Sbjct: 35973159 tattgaa 35973153
>ref|NT_079961.2| Oryza sativa (japonica cultivar-group)
Length = 3480660
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 397152 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 397211
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 397212 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 397271
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 397272 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 397331
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 397332 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 397391
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 397392 cctatgtgctccccttccatca 397413
Score = 153 bits (77), Expect = 3e-034
Identities = 146/169 (86%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 399060 atggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctccatat 399119
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| ||||||||||| || | || |||||||| || ||||| ||||||
Sbjct: 399120 acctcactggtgctggtgaggagaaattttgccccaatcctcttggccaatccaagcatg 399179
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 399180 ttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 399228
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 398192 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtgcgcttgcc 398251
Query: 856 ctcatcgtaacagctcctgacacc 879
|||||| || ||||| || |||||
Sbjct: 398252 ctcatcatagcagcttctaacacc 398275
Score = 97.6 bits (49), Expect = 2e-017
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 398016 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 398075
Query: 774 t 774
|
Sbjct: 398076 t 398076
Score = 73.8 bits (37), Expect = 2e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| |||||| |||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct: 397839 accaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaa 397898
Query: 698 ggctccttcctcagtgcctga 718
|| ||||||||||||||||||
Sbjct: 397899 ggttccttcctcagtgcctga 397919
>gb|CH401165.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000002
genomic scaffold, whole genome shotgun sequence
Length = 5008528
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 307952 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 308011
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 308012 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 308071
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 308072 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 308131
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 308132 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 308191
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 308192 cctatgtgctccccttccatca 308213
Score = 153 bits (77), Expect = 3e-034
Identities = 146/169 (86%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 309860 atggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctccatat 309919
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| ||||||||||| || | || |||||||| || ||||| ||||||
Sbjct: 309920 acctcactggtgctggtgaggagaaattttgccccaatcctcttggccaatccaagcatg 309979
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 309980 ttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 310028
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 308992 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtgcgcttgcc 309051
Query: 856 ctcatcgtaacagctcctgacacc 879
|||||| || ||||| || |||||
Sbjct: 309052 ctcatcatagcagcttctaacacc 309075
Score = 97.6 bits (49), Expect = 2e-017
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 308816 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 308875
Query: 774 t 774
|
Sbjct: 308876 t 308876
Score = 73.8 bits (37), Expect = 2e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| |||||| |||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct: 308639 accaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaa 308698
Query: 698 ggctccttcctcagtgcctga 718
|| ||||||||||||||||||
Sbjct: 308699 ggttccttcctcagtgcctga 308719
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11924447 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 11924506
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 11924507 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 11924566
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 11924567 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 11924626
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 11924627 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 11924686
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 11924687 cctatgtgctccccttccatca 11924708
Score = 153 bits (77), Expect = 3e-034
Identities = 146/169 (86%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 11926355 atggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctccatat 11926414
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| ||||||||||| || | || |||||||| || ||||| ||||||
Sbjct: 11926415 acctcactggtgctggtgaggagaaattttgccccaatcctcttggccaatccaagcatg 11926474
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 11926475 ttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 11926523
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11925487 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtgcgcttgcc 11925546
Query: 856 ctcatcgtaacagctcctgacacc 879
|||||| || ||||| || |||||
Sbjct: 11925547 ctcatcatagcagcttctaacacc 11925570
Score = 97.6 bits (49), Expect = 2e-017
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 11925311 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11925370
Query: 774 t 774
|
Sbjct: 11925371 t 11925371
Score = 73.8 bits (37), Expect = 2e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| |||||| |||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct: 11925134 accaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaa 11925193
Query: 698 ggctccttcctcagtgcctga 718
|| ||||||||||||||||||
Sbjct: 11925194 ggttccttcctcagtgcctga 11925214
Score = 67.9 bits (34), Expect = 1e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 35361417 accagatcagaaacatactgaaaacttctagtttgttttccatcaccataaactgtca 35361360
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||| || || || ||||||||||| || | ||||| |||||||||||||
Sbjct: 35361246 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 35361187
Query: 774 tattgaa 780
|||||||
Sbjct: 35361186 tattgaa 35361180
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 170 bits (86), Expect = 1e-039
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11890145 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 11890204
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|| | ||| || ||||| || |||| ||| || || ||| ||||||| ||||||||||||
Sbjct: 11890205 ggaaccttgggctcccagcccaggagctctttcgcacgggtgatgtcaggcttgcgcttg 11890264
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| || || ||| |||||| |||||||| || || || || || || |||||||||
Sbjct: 11890265 tgtggatcatccgcagtgttcggacggaactcaatgcgagcattcggatcaatggtgtcc 11890324
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
||||||||||| || ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 11890325 tggacaaccttagccagctccagcatggtgaactcacccggattacccaggttaaatggt 11890384
Query: 599 cccacatgctcgccttccatca 620
|| | ||||| ||||||||||
Sbjct: 11890385 cctatgtgctccccttccatca 11890406
Score = 153 bits (77), Expect = 3e-034
Identities = 146/169 (86%)
Strand = Plus / Plus
Query: 881 atgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatag 940
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 11892053 atggggttgacattgccccagtaagtctccacctgagggtgctggaggggatctccatat 11892112
Query: 941 acctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatg 1000
||||||||||| ||||||||||| || | || |||||||| || ||||| ||||||
Sbjct: 11892113 acctcactggtgctggtgaggagaaattttgccccaatcctcttggccaatccaagcatg 11892172
Query: 1001 ttcagagtcccaaccacattggtcttgtgctatcacaaaggttaaggct 1049
||||| ||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 11892173 ttcagtgtcccaaccacgttggtcttgtgtcatctcaaatgttaaggct 11892221
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11891185 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtgcgcttgcc 11891244
Query: 856 ctcatcgtaacagctcctgacacc 879
|||||| || ||||| || |||||
Sbjct: 11891245 ctcatcatagcagcttctaacacc 11891268
Score = 97.6 bits (49), Expect = 2e-017
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 11891009 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11891068
Query: 774 t 774
|
Sbjct: 11891069 t 11891069
Score = 73.8 bits (37), Expect = 2e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
|||| |||||| |||||||| || ||||| || ||||| ||||||||||| || |||||
Sbjct: 11890832 accaaatcagagacatattgaaagctcctagtctgcttgccatcaccatagacagtcaaa 11890891
Query: 698 ggctccttcctcagtgcctga 718
|| ||||||||||||||||||
Sbjct: 11890892 ggttccttcctcagtgcctga 11890912
Score = 67.9 bits (34), Expect = 1e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 35892720 accagatcagaaacatactgaaaacttctagtttgttttccatcaccataaactgtca 35892663
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||| || || || ||||||||||| || | ||||| |||||||||||||
Sbjct: 35892549 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 35892490
Query: 774 tattgaa 780
|||||||
Sbjct: 35892489 tattgaa 35892483
>gb|AU173448.1|AU173448 AU173448 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3167, mRNA sequence
Length = 449
Score = 159 bits (80), Expect = 5e-036
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 355 gtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacg 414
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 154 gtcttggtcaccgaaaatgcgcttgcggaagtcggtgaccatgaggggaagacccttgtg 95
Query: 415 cagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcg 474
|| |||||||| || |||||||| |||| ||||||||| |||| |||||| ||||||||
Sbjct: 94 gagagggatctttggctcccacccaaggagctccttggcacggccgatgtcaggcttgcg 35
Query: 475 cttgtgcgggtcgtcctgggtgtt 498
||||||||||||||||||||||||
Sbjct: 34 cttgtgcgggtcgtcctgggtgtt 11
>gb|CA758797.1|CA758797 BR030021000_PLATE_A07_49_051.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030021000_PLATE_A07_49_051.ab1 similar to dTDP-glucose
4-6-dehydratase homolog D18 - Arabidopsis thaliana
gi|928932|emb|CAA89205.1| (Z49239) homolog of
dTDP-glucose 4-6-dehydratases [Arabidopsis thaliana]
gi|136055..., mRNA sequence
Length = 353
Score = 117 bits (59), Expect = 2e-023
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 953 ctggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtccca 1012
|||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||
Sbjct: 282 ctggtgaggaggaacctggcattgatcctcttcgccaatccgagcatgttgagagtccca 223
Query: 1013 accacattggtcttg 1027
|||||||||||||||
Sbjct: 222 accacattggtcttg 208
Score = 87.7 bits (44), Expect = 2e-014
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 895 gccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtact 954
|||||||||||||||||| || || ||||| || |||||||| |||||||||||||| ||
Sbjct: 282 gccccagtaagtctccacttgaggatgctgcaggggatcaccgtagacctcactggtgct 341
Query: 955 ggtgaggaggaa 966
||||||||||||
Sbjct: 342 ggtgaggaggaa 353
>gb|CF330800.1|CF330800 NACL--06-K19.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--06-K19, mRNA sequence
Length = 572
Score = 117 bits (59), Expect = 2e-023
Identities = 113/131 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 160 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 101
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||| ||
Sbjct: 100 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcctg 41
Query: 479 tgcgggtcgtc 489
|||||||||||
Sbjct: 40 tgcgggtcgtc 30
>gb|CA999040.1|CA999040 S234M_D01 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 588
Score = 115 bits (58), Expect = 7e-023
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
||||||||||||||||| | ||||||||| ||||||||| || ||||||| | |||
Sbjct: 126 tggtcgccgaagatgcggtcgcggaagtcctggaccatgagcgggaggcccttgtggagg 67
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
|||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct: 66 gggatcttgggctcccagccgaggagctccttggcgcggctgatgtccggcttccgcttg 7
Query: 479 tgcggg 484
||||||
Sbjct: 6 tgcggg 1
>gb|CB656571.1|CB656571 OSJNEc11B09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11B09 3', mRNA sequence
Length = 779
Score = 101 bits (51), Expect = 1e-018
Identities = 177/219 (80%)
Strand = Plus / Plus
Query: 562 catggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcag 621
||||||||| || || ||||| ||||||||||| || || | || || || ||||||||
Sbjct: 526 catggtgaattctcctgggtttcccaggttgaaagggccaatgtgatcaccctccatcag 585
Query: 622 cttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatc 681
|||||| || ||||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 586 agccatcagtccagcaaccagatcagaaacatactgaaaacttctagtttgttttccatc 645
Query: 682 accataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacg 741
||||||||| |||| |||| | | || |||||| |||||||| || || || |||||
Sbjct: 646 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 705
Query: 742 gccatcgtcaatgcacatgcgagggccatatgtattgaa 780
|||||| || | ||||| ||||||||||||||||||||
Sbjct: 706 gccatcatctagacacattcgagggccatatgtattgaa 744
>dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F13, full
insert sequence
Length = 2387
Score = 101 bits (51), Expect = 1e-018
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 562 catggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcag 621
||||||||| || || ||||| ||||||||||| || || | || || || ||||||||
Sbjct: 1847 catggtgaattctcctgggtttcccaggttgaaagggccaatgtgatcaccctccatcag 1788
Query: 622 cttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatc 681
|||||| || ||||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 1787 agccatcagtccagcaaccagatcagaaacatactgaaaacttctagtttgttttccatc 1728
Query: 682 accataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacg 741
||||||||| |||| |||| | | || |||||| |||||||| || || || |||||
Sbjct: 1727 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 1668
Query: 742 gccatcgtcaatgcacatgcgagggccatatgtattgaa 780
|||||| || | ||||| ||||||||||||||||||||
Sbjct: 1667 gccatcatctagacacattcgagggccatatgtattgaa 1629
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
||||| || ||||||||||| ||||| || ||||| |||| |||||||||||||||
Sbjct: 1555 ccctcgtcataacagctcctaacaccaataggattaacatgcccccagtaagtctcc 1499
>dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H12, full
insert sequence
Length = 805
Score = 101 bits (51), Expect = 1e-018
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 562 catggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcag 621
||||||||| || || ||||| ||||||||||| || || | || || || ||||||||
Sbjct: 270 catggtgaattctcctgggtttcccaggttgaaagggccaatgtgatcaccctccatcag 211
Query: 622 cttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatc 681
|||||| || ||||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 210 agccatcagtccagcaaccagatcagaaacatactgaaaacttctagtttgttttccatc 151
Query: 682 accataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacg 741
||||||||| |||| |||| | | || |||||| |||||||| || || || |||||
Sbjct: 150 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 91
Query: 742 gccatcgtcaatgcacatgcgagggccatatgtattgaa 780
|||||| || | ||||| ||||||||||||||||||||
Sbjct: 90 gccatcatctagacacattcgagggccatatgtattgaa 52
>dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRNA for UDP-glucuronic
acid decarboxylase, complete cds
Length = 1404
Score = 101 bits (51), Expect = 1e-018
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 562 catggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcag 621
||||||||| || || ||||| ||||||||||| || || | || || || ||||||||
Sbjct: 1029 catggtgaattctcctgggtttcccaggttgaaagggccaatgtgatcaccctccatcag 970
Query: 622 cttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatc 681
|||||| || ||||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 969 agccatcagtccagcaaccagatcagaaacatactgaaaacttctagtttgttttccatc 910
Query: 682 accataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacg 741
||||||||| |||| |||| | | || |||||| |||||||| || || || |||||
Sbjct: 909 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 850
Query: 742 gccatcgtcaatgcacatgcgagggccatatgtattgaa 780
|||||| || | ||||| ||||||||||||||||||||
Sbjct: 849 gccatcatctagacacattcgagggccatatgtattgaa 811
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
||||| || ||||||||||| ||||| || ||||| |||| |||||||||||||||
Sbjct: 737 ccctcgtcataacagctcctaacaccaataggattaacatgcccccagtaagtctcc 681
>ref|NM_190499.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1173
Score = 101 bits (51), Expect = 1e-018
Identities = 177/219 (80%)
Strand = Plus / Minus
Query: 562 catggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcag 621
||||||||| || || ||||| ||||||||||| || || | || || || ||||||||
Sbjct: 969 catggtgaattctcctgggtttcccaggttgaaagggccaatgtgatcaccctccatcag 910
Query: 622 cttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatc 681
|||||| || ||||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 909 agccatcagtccagcaaccagatcagaaacatactgaaaacttctagtttgttttccatc 850
Query: 682 accataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacg 741
||||||||| |||| |||| | | || |||||| |||||||| || || || |||||
Sbjct: 849 accataaactgtcataggctgtctacgcaatgcctgggcaacaaaattgctaaccacacg 790
Query: 742 gccatcgtcaatgcacatgcgagggccatatgtattgaa 780
|||||| || | ||||| ||||||||||||||||||||
Sbjct: 789 gccatcatctagacacattcgagggccatatgtattgaa 751
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
||||| || ||||||||||| ||||| || ||||| |||| |||||||||||||||
Sbjct: 677 ccctcgtcataacagctcctaacaccaataggattaacatgcccccagtaagtctcc 621
>gb|CF323882.1|CF323882 HDN--05-A09.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-A09, mRNA sequence
Length = 554
Score = 99.6 bits (50), Expect = 4e-018
Identities = 140/170 (82%)
Strand = Plus / Minus
Query: 611 ccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtt 670
||||||||||| |||||| || ||||||||||||||||||| || ||||| || |||
Sbjct: 493 ccttccatcagagccatcagtccagcaaccagatcagaaacatactgaaaacttctagtt 434
Query: 671 tgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagtta 730
|| ||||||||||||||||| |||| |||| | | || |||||| |||||||| ||
Sbjct: 433 tgttttccatcaccataaactgtcataggctgtctacgcaatgcctgggcaacaaaattg 374
Query: 731 ctgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaa 780
|| || ||||||||||| || | ||||| ||||||||||||||||||||
Sbjct: 373 ctaaccacacggccatcatctagacacattcgagggccatatgtattgaa 324
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctcc 910
||||| || ||||||||||| ||||| || ||||| |||| |||||||||||||||
Sbjct: 245 ccctcgtcataacagctcctaacaccaataggattaacatgcccccagtaagtctcc 189
>gb|AU173188.1|AU173188 AU173188 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1645, mRNA sequence
Length = 449
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 66 tggtcgccaaagatgcgtttgcggaagtcggtaaccatgaggggaaggccctcacgcagg 7
Query: 419 gg 420
||
Sbjct: 6 gg 5
>gb|AACV01017002.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg017002, whole
genome shotgun sequence
Length = 1476
Score = 91.7 bits (46), Expect = 1e-015
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct: 1206 accgatggggttgacgttgccccagtaggtctcgacctgggggtgctggagcgggtcgcc 1265
Query: 937 atagacctcactggtactggtgaggaggaa 966
|||||||| ||||| ||||||||||||||
Sbjct: 1266 gtagacctcgctggtgctggtgaggaggaa 1295
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 795 taacctcaaggttggcaccacggtggtaatccatggtca 833
||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 1020 taacctcgaggttggcgccacggtggtagtccatggtca 1058
>gb|CB674715.1|CB674715 OSJNEe09O17.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09O17 5', mRNA sequence
Length = 797
Score = 69.9 bits (35), Expect = 4e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 929 ggatcaccatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgct 988
||||| ||||| ||||||||||| ||||||||||| || | || |||||||| ||
Sbjct: 794 ggatctccatatacctcactggtgctggtgaggagaaattttgccccaatcctcttggcc 735
Query: 989 aatccgagcatgttcagagtcccaaccacattggtcttg 1027
||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 734 aatccaagcatgttcagtgtcccaaccacgttggtcttg 696
>gb|AACV01002640.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002640, whole
genome shotgun sequence
Length = 28300
Score = 67.9 bits (34), Expect = 1e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 11404 accagatcagaaacatactgaaaacttctagtttgttttccatcaccataaactgtca 11347
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||| || || || ||||||||||| || | ||||| |||||||||||||
Sbjct: 11233 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 11174
Query: 774 tattgaa 780
|||||||
Sbjct: 11173 tattgaa 11167
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 67.9 bits (34), Expect = 1e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 10420773 accagatcagaaacatactgaaaacttctagtttgttttccatcaccataaactgtca 10420716
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||| || || || ||||||||||| || | ||||| |||||||||||||
Sbjct: 10420602 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 10420543
Query: 774 tattgaa 780
|||||||
Sbjct: 10420542 tattgaa 10420536
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0506B12
Length = 170759
Score = 67.9 bits (34), Expect = 1e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 157178 accagatcagaaacatactgaaaacttctagtttgttttccatcaccataaactgtca 157121
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||| || || || ||||||||||| || | ||||| |||||||||||||
Sbjct: 157007 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 156948
Query: 774 tattgaa 780
|||||||
Sbjct: 156947 tattgaa 156941
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 67.9 bits (34), Expect = 1e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
||||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 10159696 accagatcagaaacatactgaaaacttctagtttgttttccatcaccataaactgtca 10159639
Score = 54.0 bits (27), Expect = 2e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||| |||||||| || || || ||||||||||| || | ||||| |||||||||||||
Sbjct: 10159525 cctgggcaacaaaattgctaaccacacggccatcatctagacacattcgagggccatatg 10159466
Query: 774 tattgaa 780
|||||||
Sbjct: 10159465 tattgaa 10159459
>gb|CB662804.1|CB662804 OSJNEd07C16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07C16 5', mRNA sequence
Length = 794
Score = 61.9 bits (31), Expect = 9e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 977 atcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|||||||| || ||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 778 atcctcttggccaatccaagcatgttcagtgtcccaaccacgttggtcttg 728
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0009C19, from chromosome 3, complete sequence
Length = 131709
Score = 60.0 bits (30), Expect = 4e-006
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||| ||| ||||||||||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 39244 accaaatctgaaacatattgaaaacttctagtctgctttccatcaccataaactgtca 39187
Score = 60.0 bits (30), Expect = 4e-006
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 808 ggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaaca 867
|||||| || |||||||||||||||| || |||||||| | ||||||||| ||||||||
Sbjct: 38397 ggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtcgtaaca 38338
Query: 868 gctcct 873
|||||
Sbjct: 38337 actcct 38332
Score = 60.0 bits (30), Expect = 4e-006
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| |||||||| |||| ||||||||| ||||| ||| || || | ||||||||||
Sbjct: 38201 cacctatgggatttacatggccccagtagctctccttctgtggatgttcaagaggatcac 38142
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
| || ||||||||||||||||| | | ||||| ||| | ||||||||| ||||| |
Sbjct: 38141 cgtacacctcactggtactggtcaataagaaccgggctcccaccctctttgccaatccca 38082
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctat 1033
||||||||| ||||| | |||||| ||||||| ||||
Sbjct: 38081 gcatgttcaaggtccccatcacatttgtcttgtactat 38044
>gb|AACV01006352.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006352, whole
genome shotgun sequence
Length = 30443
Score = 60.0 bits (30), Expect = 4e-006
Identities = 126/158 (79%)
Strand = Plus / Plus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| |||||||| |||| ||||||||| ||||| ||| || || | ||||||||||
Sbjct: 4894 cacctatgggatttacatggccccagtagctctccttctgtggatgttcaagaggatcac 4953
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
| || ||||||||||||||||| | | ||||| ||| | ||||||||| ||||| |
Sbjct: 4954 cgtacacctcactggtactggtcaataagaaccgggctcccaccctctttgccaatccca 5013
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctat 1033
||||||||| ||||| | |||||| ||||||| ||||
Sbjct: 5014 gcatgttcaaggtccccatcacatttgtcttgtactat 5051
Score = 60.0 bits (30), Expect = 4e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 808 ggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaaca 867
|||||| || |||||||||||||||| || |||||||| | ||||||||| ||||||||
Sbjct: 4698 ggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtcgtaaca 4757
Query: 868 gctcct 873
|||||
Sbjct: 4758 actcct 4763
Score = 60.0 bits (30), Expect = 4e-006
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||| ||| ||||||||||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 3851 accaaatctgaaacatattgaaaacttctagtctgctttccatcaccataaactgtca 3908
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 60.0 bits (30), Expect = 4e-006
Identities = 126/158 (79%)
Strand = Plus / Plus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| |||||||| |||| ||||||||| ||||| ||| || || | ||||||||||
Sbjct: 918422 cacctatgggatttacatggccccagtagctctccttctgtggatgttcaagaggatcac 918481
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
| || ||||||||||||||||| | | ||||| ||| | ||||||||| ||||| |
Sbjct: 918482 cgtacacctcactggtactggtcaataagaaccgggctcccaccctctttgccaatccca 918541
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctat 1033
||||||||| ||||| | |||||| ||||||| ||||
Sbjct: 918542 gcatgttcaaggtccccatcacatttgtcttgtactat 918579
Score = 60.0 bits (30), Expect = 4e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 808 ggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaaca 867
|||||| || |||||||||||||||| || |||||||| | ||||||||| ||||||||
Sbjct: 918226 ggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtcgtaaca 918285
Query: 868 gctcct 873
|||||
Sbjct: 918286 actcct 918291
Score = 60.0 bits (30), Expect = 4e-006
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||| ||| ||||||||||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 917379 accaaatctgaaacatattgaaaacttctagtctgctttccatcaccataaactgtca 917436
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 60.0 bits (30), Expect = 4e-006
Identities = 126/158 (79%)
Strand = Plus / Plus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| |||||||| |||| ||||||||| ||||| ||| || || | ||||||||||
Sbjct: 9571708 cacctatgggatttacatggccccagtagctctccttctgtggatgttcaagaggatcac 9571767
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
| || ||||||||||||||||| | | ||||| ||| | ||||||||| ||||| |
Sbjct: 9571768 cgtacacctcactggtactggtcaataagaaccgggctcccaccctctttgccaatccca 9571827
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctat 1033
||||||||| ||||| | |||||| ||||||| ||||
Sbjct: 9571828 gcatgttcaaggtccccatcacatttgtcttgtactat 9571865
Score = 60.0 bits (30), Expect = 4e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 808 ggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaaca 867
|||||| || |||||||||||||||| || |||||||| | ||||||||| ||||||||
Sbjct: 9571512 ggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtcgtaaca 9571571
Query: 868 gctcct 873
|||||
Sbjct: 9571572 actcct 9571577
Score = 60.0 bits (30), Expect = 4e-006
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||| ||| ||||||||||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 9570665 accaaatctgaaacatattgaaaacttctagtctgctttccatcaccataaactgtca 9570722
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 60.0 bits (30), Expect = 4e-006
Identities = 126/158 (79%)
Strand = Plus / Plus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| |||||||| |||| ||||||||| ||||| ||| || || | ||||||||||
Sbjct: 9764070 cacctatgggatttacatggccccagtagctctccttctgtggatgttcaagaggatcac 9764129
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
| || ||||||||||||||||| | | ||||| ||| | ||||||||| ||||| |
Sbjct: 9764130 cgtacacctcactggtactggtcaataagaaccgggctcccaccctctttgccaatccca 9764189
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctat 1033
||||||||| ||||| | |||||| ||||||| ||||
Sbjct: 9764190 gcatgttcaaggtccccatcacatttgtcttgtactat 9764227
Score = 60.0 bits (30), Expect = 4e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 808 ggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaaca 867
|||||| || |||||||||||||||| || |||||||| | ||||||||| ||||||||
Sbjct: 9763874 ggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtcgtaaca 9763933
Query: 868 gctcct 873
|||||
Sbjct: 9763934 actcct 9763939
Score = 60.0 bits (30), Expect = 4e-006
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||| ||| ||||||||||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 9763027 accaaatctgaaacatattgaaaacttctagtctgctttccatcaccataaactgtca 9763084
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 60.0 bits (30), Expect = 4e-006
Identities = 126/158 (79%)
Strand = Plus / Plus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| |||||||| |||| ||||||||| ||||| ||| || || | ||||||||||
Sbjct: 9572606 cacctatgggatttacatggccccagtagctctccttctgtggatgttcaagaggatcac 9572665
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
| || ||||||||||||||||| | | ||||| ||| | ||||||||| ||||| |
Sbjct: 9572666 cgtacacctcactggtactggtcaataagaaccgggctcccaccctctttgccaatccca 9572725
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctat 1033
||||||||| ||||| | |||||| ||||||| ||||
Sbjct: 9572726 gcatgttcaaggtccccatcacatttgtcttgtactat 9572763
Score = 60.0 bits (30), Expect = 4e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 808 ggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaaca 867
|||||| || |||||||||||||||| || |||||||| | ||||||||| ||||||||
Sbjct: 9572410 ggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtcgtaaca 9572469
Query: 868 gctcct 873
|||||
Sbjct: 9572470 actcct 9572475
Score = 60.0 bits (30), Expect = 4e-006
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||| ||| ||||||||||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 9571563 accaaatctgaaacatattgaaaacttctagtctgctttccatcaccataaactgtca 9571620
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 60.0 bits (30), Expect = 4e-006
Identities = 126/158 (79%)
Strand = Plus / Plus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
|||| |||||||| |||| ||||||||| ||||| ||| || || | ||||||||||
Sbjct: 9574485 cacctatgggatttacatggccccagtagctctccttctgtggatgttcaagaggatcac 9574544
Query: 936 catagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccga 995
| || ||||||||||||||||| | | ||||| ||| | ||||||||| ||||| |
Sbjct: 9574545 cgtacacctcactggtactggtcaataagaaccgggctcccaccctctttgccaatccca 9574604
Query: 996 gcatgttcagagtcccaaccacattggtcttgtgctat 1033
||||||||| ||||| | |||||| ||||||| ||||
Sbjct: 9574605 gcatgttcaaggtccccatcacatttgtcttgtactat 9574642
Score = 60.0 bits (30), Expect = 4e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 808 ggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaaca 867
|||||| || |||||||||||||||| || |||||||| | ||||||||| ||||||||
Sbjct: 9574289 ggcacctcgatggtaatccatggtcagagtctcagctgttctcttgccctcgtcgtaaca 9574348
Query: 868 gctcct 873
|||||
Sbjct: 9574349 actcct 9574354
Score = 60.0 bits (30), Expect = 4e-006
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtca 695
|||| ||| ||||||||||| ||||| || || |||||||||||||||||||| ||||
Sbjct: 9573442 accaaatctgaaacatattgaaaacttctagtctgctttccatcaccataaactgtca 9573499
>gb|CX728359.1|CX728359 OSJNEf05A21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf05A21 3', mRNA sequence
Length = 398
Score = 46.1 bits (23), Expect = 0.054
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 359 tggtcgccgaagatgcgcttgcggaagtcgg 389
|||||||| |||||||| |||||||||||||
Sbjct: 362 tggtcgccaaagatgcgtttgcggaagtcgg 392
>gb|CB000697.1|CB000697 S345J_B09 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 580
Score = 42.1 bits (21), Expect = 0.85
Identities = 75/93 (80%)
Strand = Plus / Minus
Query: 562 catggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcag 621
||||||||| || || ||||| ||||||||||| || || | || || || ||||||||
Sbjct: 100 catggtgaattctcctgggtttcccaggttgaaagggccaatgtgatcaccctccatcag 41
Query: 622 cttcatcagaccctcaaccagatcagaaacata 654
|||||| || |||||||||||||||||||
Sbjct: 40 agccatcagtccagcaaccagatcagaaacata 8
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
clone:OJA1212_C06
Length = 113554
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 104110 aaccttggcaagctcaagca 104091
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1212_C06
Length = 110989
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 101545 aaccttggcaagctcaagca 101526
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1359_D06
Length = 146805
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 20354 aaccttggcaagctcaagca 20335
>gb|AACV01003164.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003164, whole
genome shotgun sequence
Length = 26160
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 5143 aaccttggcaagctcaagca 5162
>gb|AACV01013034.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013034, whole
genome shotgun sequence
Length = 23495
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaatac 159
||||||||||||||||||||
Sbjct: 6523 aactgagaaagaaaaaatac 6504
>dbj|AP003632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0624B04
Length = 72745
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaatac 159
||||||||||||||||||||
Sbjct: 55317 aactgagaaagaaaaaatac 55336
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0710H01
Length = 187107
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaatac 159
||||||||||||||||||||
Sbjct: 11456 aactgagaaagaaaaaatac 11475
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaatac 159
||||||||||||||||||||
Sbjct: 2519692 aactgagaaagaaaaaatac 2519711
>ref|NT_107175.1| Oryza sativa (japonica cultivar-group)
Length = 2882457
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 291570 aaccttggcaagctcaagca 291551
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaatac 159
||||||||||||||||||||
Sbjct: 2473988 aactgagaaagaaaaaatac 2474007
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006
genomic scaffold, whole genome shotgun sequence
Length = 13452964
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 284761 aaccttggcaagctcaagca 284742
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaatac 159
||||||||||||||||||||
Sbjct: 2473988 aactgagaaagaaaaaatac 2474007
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 284761 aaccttggcaagctcaagca 284742
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
complete sequence
Length = 35954743
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 544 aaccttggcaagctcaagca 563
||||||||||||||||||||
Sbjct: 291570 aaccttggcaagctcaagca 291551
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 40.1 bits (20), Expect = 3.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaatac 159
||||||||||||||||||||
Sbjct: 2556115 aactgagaaagaaaaaatac 2556134
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,973,812
Number of Sequences: 438736
Number of extensions: 1973812
Number of successful extensions: 10168
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9249
Number of HSP's gapped (non-prelim): 853
length of query: 1475
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1454
effective length of database: 2,791,206,460
effective search space: 4058414192840
effective search space used: 4058414192840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)