BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161285.2.2
(798 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB643141.1|CB643141 OSJNEb03K21.r OSJNEb Oryza sativa (j... 119 2e-024
gb|CB649773.1|CB649773 OSJNEb13O11.r OSJNEb Oryza sativa (j... 119 2e-024
gb|CB651549.1|CB651549 OSJNEb16I21.r OSJNEb Oryza sativa (j... 119 2e-024
gb|CB669652.1|CB669652 OSJNEe02E22.r OSJNEe Oryza sativa (j... 119 2e-024
gb|CB669722.1|CB669722 OSJNEe02G23.f OSJNEe Oryza sativa (j... 119 2e-024
gb|CB678078.1|CB678078 OSJNEe15K07.r OSJNEe Oryza sativa (j... 119 2e-024
dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA... 119 2e-024
dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA... 119 2e-024
gb|D46199.1|D46199 RICS10723A Rice green shoot Oryza sativa... 107 9e-021
gb|CB641393.1|CB641393 OSJNEb01A03.r OSJNEb Oryza sativa (j... 107 9e-021
gb|CB661902.1|CB661902 OSJNEd05F11.r OSJNEd Oryza sativa (j... 107 9e-021
gb|CB664093.1|CB664093 OSJNEd09J24.r OSJNEd Oryza sativa (j... 107 9e-021
gb|CB668680.1|CB668680 OSJNEd16K11.f OSJNEd Oryza sativa (j... 107 9e-021
gb|CB668681.1|CB668681 OSJNEd16K11.r OSJNEd Oryza sativa (j... 107 9e-021
gb|CB670940.1|CB670940 OSJNEe04E10.r OSJNEe Oryza sativa (j... 107 9e-021
gb|CB674069.1|CB674069 OSJNEe08P02.r OSJNEe Oryza sativa (j... 107 9e-021
gb|CB682403.1|CB682403 OSJNEf09L04.f OSJNEf Oryza sativa (j... 107 9e-021
dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA... 107 9e-021
gb|CF277012.1|CF277012 14ETL--02-G05.b1 Rice etiolated leaf... 101 6e-019
gb|CB663307.1|CB663307 OSJNEd08B16.r OSJNEd Oryza sativa (j... 100 2e-018
gb|AU033169.1|AU033169 AU033169 Rice shoot Oryza sativa (ja... 96 3e-017
gb|CB637777.1|CB637777 OSJNEa04P09.r OSJNEa Oryza sativa (j... 96 3e-017
gb|CB682404.1|CB682404 OSJNEf09L04.r OSJNEf Oryza sativa (j... 92 5e-016
gb|CX728064.1|CX728064 OSJNEd08P02.r OSJNEd Oryza sativa (j... 92 5e-016
gb|CB637203.1|CB637203 OSJNEa03H23.r OSJNEa Oryza sativa (j... 88 9e-015
gb|CB637215.1|CB637215 OSJNEa03I10.r OSJNEa Oryza sativa (j... 88 9e-015
gb|CB671345.1|CB671345 OSJNEe04O03.r OSJNEe Oryza sativa (j... 88 9e-015
gb|CB673445.1|CB673445 OSJNEe07P13.r OSJNEe Oryza sativa (j... 88 9e-015
gb|CV732956.1|CV732956 FLO--07-K16.g1 Rice flower lambda ph... 88 9e-015
gb|AC123516.2| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 86 3e-014
gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) c... 86 3e-014
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 86 3e-014
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
gb|CB645438.1|CB645438 OSJNEb07B22.r OSJNEb Oryza sativa (j... 84 1e-013
gb|CB637085.1|CB637085 OSJNEa03E01.r OSJNEa Oryza sativa (j... 82 5e-013
gb|CB671150.1|CB671150 OSJNEe04J07.r OSJNEe Oryza sativa (j... 82 5e-013
dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA... 82 5e-013
dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA... 82 5e-013
emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC O... 82 5e-013
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 82 5e-013
gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) c... 82 5e-013
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 82 5e-013
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 82 5e-013
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 82 5e-013
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 82 5e-013
dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA... 80 2e-012
gb|CB663675.1|CB663675 OSJNEd08P02.f OSJNEd Oryza sativa (j... 76 3e-011
gb|CB636966.1|CB636966 OSJNEa03A01.r OSJNEa Oryza sativa (j... 74 1e-010
gb|CB669692.1|CB669692 OSJNEe02F24.r OSJNEe Oryza sativa (j... 74 1e-010
dbj|AK062199.1| Oryza sativa (japonica cultivar-group) cDNA... 66 3e-008
dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA... 66 3e-008
gb|CF277013.1|CF277013 14ETL--02-G05.g1 Rice etiolated leaf... 62 5e-007
gb|AQ575769.1|AQ575769 nbxb0087L14f CUGI Rice BAC Library O... 60 2e-006
gb|CF323512.1|CF323512 HDN--04-A19.g1 OsHDAC1-overexpressin... 60 2e-006
gb|AC138454.2| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01022286.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|XM_471515.1| Oryza sativa (japonica cultivar-group), p... 60 2e-006
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 60 2e-006
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromoso... 60 2e-006
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|D23838.1|D23838 RICR0328A Rice root Oryza sativa (japoni... 56 3e-005
gb|CB637289.1|CB637289 OSJNEa03L09.f OSJNEa Oryza sativa (j... 56 3e-005
gb|CB637693.1|CB637693 OSJNEa04L18.r OSJNEa Oryza sativa (j... 52 5e-004
dbj|AP005514.2| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AACV01004237.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
>gb|CB643141.1|CB643141 OSJNEb03K21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03K21 3', mRNA sequence
Length = 766
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 642 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 583
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 582 tggcaacaatatggaactcctagttactggatgcagactcttttc 538
Score = 71.9 bits (36), Expect = 5e-010
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 334 atggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagc 393
||||| |||||||| || ||||||||||| ||||||| ||||| ||||||||||| |
Sbjct: 309 atggatgagaactcttttagtaacccgaataaggttgttccggtcaaaagccagctttcc 250
Query: 394 aacgccgcggagcagatgcaggtcacgctggctcctcact 433
|| || || ||||||||||| ||| |||| ||||||||||
Sbjct: 249 aatgcagcagagcagatgcaagtcccgcttgctcctcact 210
>gb|CB649773.1|CB649773 OSJNEb13O11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13O11 3', mRNA sequence
Length = 815
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 641 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 582
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 581 tggcaacaatatggaactcctagttactggatgcagactcttttc 537
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 347 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 288
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 287 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 228
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 227 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 184
>gb|CB651549.1|CB651549 OSJNEb16I21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I21 3', mRNA sequence
Length = 821
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 642 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 583
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 582 tggcaacaatatggaactcctagttactggatgcagactcttttc 538
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 348 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 289
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 288 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 229
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 228 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 185
>gb|CB669652.1|CB669652 OSJNEe02E22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02E22 3', mRNA sequence
Length = 819
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 781 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 722
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 721 tggcaacaatatggaactcctagttactggatgcagactcttttc 677
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 487 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 428
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 427 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 368
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 367 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 324
>gb|CB669722.1|CB669722 OSJNEe02G23.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02G23 5', mRNA sequence
Length = 798
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 781 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 722
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 721 tggcaacaatatggaactcctagttactggatgcagactcttttc 677
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 487 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 428
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 427 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 368
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 367 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 324
>gb|CB678078.1|CB678078 OSJNEe15K07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15K07 3', mRNA sequence
Length = 691
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 657 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 598
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 597 tggcaacaatatggaactcctagttactggatgcagactcttttc 553
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 363 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 304
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 303 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 244
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 243 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 200
>dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B06, full
insert sequence
Length = 926
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 125 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 184
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 185 tggcaacaatatggaactcctagttactggatgcagactcttttc 229
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 419 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 478
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 479 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 538
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 539 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 582
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full
insert sequence
Length = 2285
Score = 119 bits (60), Expect = 2e-024
Identities = 93/105 (88%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 1639 ccactcttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 1698
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 1699 tggcaacaatatggaactcctagttactggatgcagactcttttc 1743
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 1933 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 1992
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 1993 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 2052
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 2053 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 2096
>gb|D46199.1|D46199 RICS10723A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 340
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 190 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 249
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 250 tggcaacaatacggaactcctagttactggatgcagactcttttccg 296
>gb|CB641393.1|CB641393 OSJNEb01A03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01A03 3', mRNA sequence
Length = 818
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 655 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 596
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 595 tggcaacaatacggaactcctagttactggatgcagactcttttccg 549
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 367 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 308
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 307 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 248
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 247 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 198
>gb|CB661902.1|CB661902 OSJNEd05F11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05F11 3', mRNA sequence
Length = 810
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 642 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 583
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 582 tggcaacaatacggaactcctagttactggatgcagactcttttccg 536
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 354 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 295
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 294 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 235
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 234 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 185
>gb|CB664093.1|CB664093 OSJNEd09J24.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09J24 3', mRNA sequence
Length = 861
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 687 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 628
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 627 tggcaacaatacggaactcctagttactggatgcagactcttttccg 581
Score = 83.8 bits (42), Expect = 1e-013
Identities = 120/146 (82%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 399 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 340
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 339 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 280
Query: 409 atgcaggtcacgctggctcctcactc 434
||||| |||||||| |||||||||||
Sbjct: 279 atgcaagtcacgcttgctcctcactc 254
>gb|CB668680.1|CB668680 OSJNEd16K11.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16K11 5', mRNA sequence
Length = 752
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 273 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 332
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 333 tggcaacaatacggaactcctagttactggatgcagactcttttccg 379
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 561 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 620
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 621 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 680
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 681 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 730
>gb|CB668681.1|CB668681 OSJNEd16K11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16K11 3', mRNA sequence
Length = 772
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 647 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 588
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 587 tggcaacaatacggaactcctagttactggatgcagactcttttccg 541
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 359 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 300
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 299 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 240
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 239 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 190
>gb|CB670940.1|CB670940 OSJNEe04E10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04E10 3', mRNA sequence
Length = 787
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 642 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 583
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 582 tggcaacaatacggaactcctagttactggatgcagactcttttccg 536
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 354 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 295
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 294 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 235
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 234 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 185
>gb|CB674069.1|CB674069 OSJNEe08P02.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P02 3', mRNA sequence
Length = 797
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 652 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 593
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 592 tggcaacaatacggaactcctagttactggatgcagactcttttccg 546
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 364 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 305
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 304 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 245
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 244 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 195
>gb|CB682403.1|CB682403 OSJNEf09L04.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09L04 5', mRNA sequence
Length = 752
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 476 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 535
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 536 tggcaacaatacggaactcctagttactggatgcagactcttttccg 582
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full
insert sequence
Length = 2272
Score = 107 bits (54), Expect = 9e-021
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 1633 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 1692
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 1693 tggcaacaatacggaactcctagttactggatgcagactcttttccg 1739
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 1921 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 1980
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 1981 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 2040
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 2041 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 2090
>gb|CF277012.1|CF277012 14ETL--02-G05.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-G05, mRNA sequence
Length = 552
Score = 101 bits (51), Expect = 6e-019
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 374 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcc 433
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|| ||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 434 tgncaacaatacggaactcctagttactggatgcagactcttttccg 480
>gb|CB663307.1|CB663307 OSJNEd08B16.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08B16 3', mRNA sequence
Length = 838
Score = 99.6 bits (50), Expect = 2e-018
Identities = 93/107 (86%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 809 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatt-aactcc 751
Query: 61 tggcaacactatggnactcctagctactggatgcagacnnttttccg 107
|||||||| || || |||||||| |||||||||||||| |||||||
Sbjct: 750 tggcaacaatacggaactcctagttactggatgcagactcttttccg 704
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 522 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 463
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 462 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 403
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 402 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 353
>gb|AU033169.1|AU033169 AU033169 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S4337_1Z, mRNA sequence
Length = 407
Score = 95.6 bits (48), Expect = 3e-017
Identities = 135/164 (82%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| |||||||| || | || || ||||| |||||||| || |||
Sbjct: 31 ctgggatcaactgccactgtcctcacatccagtaatgtgatggatgagaactcttttagt 90
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 91 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 150
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 151 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 194
>gb|CB637777.1|CB637777 OSJNEa04P09.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04P09 3', mRNA sequence
Length = 515
Score = 95.6 bits (48), Expect = 3e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 509 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 450
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 449 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 390
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | ||||||||||||||
Sbjct: 389 gtcacgcttgctcctcactctttctcctcattcgatctggcgct 346
>gb|CB682404.1|CB682404 OSJNEf09L04.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09L04 3', mRNA sequence
Length = 804
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 587 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 528
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 527 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 468
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 467 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 418
Score = 44.1 bits (22), Expect = 0.11
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 76 actcctagctactggatgcagacnnttttccg 107
|||||||| |||||||||||||| |||||||
Sbjct: 800 actcctagttactggatgcagactcttttccg 769
>gb|CX728064.1|CX728064 OSJNEd08P02.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08P02 3', mRNA sequence
Length = 553
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 364 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 305
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 304 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 245
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 244 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 195
>gb|CB637203.1|CB637203 OSJNEa03H23.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03H23 3', mRNA sequence
Length = 598
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 337 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 278
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 277 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 218
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 217 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 174
Score = 77.8 bits (39), Expect = 8e-012
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 34 aacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactggatg 93
||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||||||
Sbjct: 598 aacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactggatg 539
Query: 94 cagacnnttttc 105
||||| |||||
Sbjct: 538 cagactcttttc 527
>gb|CB637215.1|CB637215 OSJNEa03I10.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03I10 3', mRNA sequence
Length = 553
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 534 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 475
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 474 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 415
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 414 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 371
>gb|CB671345.1|CB671345 OSJNEe04O03.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04O03 3', mRNA sequence
Length = 785
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 554 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 495
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 494 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 435
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 434 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 391
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 64 caacactatggnactcctagctactggatgcagacnnttttc 105
||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 785 caacaatatggaactcctagttactggatgcagactcttttc 744
>gb|CB673445.1|CB673445 OSJNEe07P13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07P13 3', mRNA sequence
Length = 799
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 634 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 575
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 574 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 515
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 514 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 471
>gb|CV732956.1|CV732956 FLO--07-K16.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-K16,
mRNA sequence
Length = 496
Score = 87.7 bits (44), Expect = 9e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 367 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 308
Query: 355 aacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcag 414
|||||||| ||||||| || || ||||||||||| ||| || || |||||||||||
Sbjct: 307 aacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcagatgcaa 248
Query: 415 gtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
|||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 247 gtcacgcttgctcctcactctttctcctcattcgatcttgcgct 204
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 79055 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 79114
Query: 90 gatgcagacnnttttc 105
||||||||| |||||
Sbjct: 79115 gatgcagactcttttc 79130
Score = 75.8 bits (38), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 86438 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 86497
Query: 91 atgca 95
|||||
Sbjct: 86498 atgca 86502
Score = 60.0 bits (30), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 110640 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 110699
Query: 91 atgca 95
|||||
Sbjct: 110700 atgca 110704
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 79598 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 79657
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 79658 tcctcattcgatcttgcgct 79677
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 79402 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 79461
Query: 355 aacccgaacaaggt 368
|||||||| |||||
Sbjct: 79462 aacccgaataaggt 79475
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 458542 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 458601
Query: 90 gatgcagacnnttttc 105
||||||||| |||||
Sbjct: 458602 gatgcagactcttttc 458617
Score = 75.8 bits (38), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 465925 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 465984
Query: 91 atgca 95
|||||
Sbjct: 465985 atgca 465989
Score = 60.0 bits (30), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 490127 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 490186
Query: 91 atgca 95
|||||
Sbjct: 490187 atgca 490191
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 459085 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 459144
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 459145 tcctcattcgatcttgcgct 459164
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 458889 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 458948
Query: 355 aacccgaacaaggt 368
|||||||| |||||
Sbjct: 458949 aacccgaataaggt 458962
>gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022284, whole
genome shotgun sequence
Length = 83387
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 22223 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 22164
Query: 90 gatgcagacnnttttc 105
||||||||| |||||
Sbjct: 22163 gatgcagactcttttc 22148
Score = 75.8 bits (38), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 14840 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 14781
Query: 91 atgca 95
|||||
Sbjct: 14780 atgca 14776
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 21680 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 21621
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 21620 tcctcattcgatcttgcgct 21601
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 21876 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 21817
Query: 355 aacccgaacaaggt 368
|||||||| |||||
Sbjct: 21816 aacccgaataaggt 21803
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 1153407 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 1153466
Query: 90 gatgcagacnnttttc 105
||||||||| |||||
Sbjct: 1153467 gatgcagactcttttc 1153482
Score = 75.8 bits (38), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1160790 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 1160849
Query: 91 atgca 95
|||||
Sbjct: 1160850 atgca 1160854
Score = 60.0 bits (30), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 1185919 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 1185978
Query: 91 atgca 95
|||||
Sbjct: 1185979 atgca 1185983
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 1153950 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 1154009
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 1154010 tcctcattcgatcttgcgct 1154029
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 1153754 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 1153813
Query: 355 aacccgaacaaggt 368
|||||||| |||||
Sbjct: 1153814 aacccgaataaggt 1153827
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 1455699 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 1455758
Query: 90 gatgcagacnnttttc 105
||||||||| |||||
Sbjct: 1455759 gatgcagactcttttc 1455774
Score = 75.8 bits (38), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1463082 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 1463141
Query: 91 atgca 95
|||||
Sbjct: 1463142 atgca 1463146
Score = 60.0 bits (30), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 1488211 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 1488270
Query: 91 atgca 95
|||||
Sbjct: 1488271 atgca 1488275
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 1456242 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 1456301
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 1456302 tcctcattcgatcttgcgct 1456321
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 1456046 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 1456105
Query: 355 aacccgaacaaggt 368
|||||||| |||||
Sbjct: 1456106 aacccgaataaggt 1456119
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 1460260 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 1460319
Query: 90 gatgcagacnnttttc 105
||||||||| |||||
Sbjct: 1460320 gatgcagactcttttc 1460335
Score = 75.8 bits (38), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1467643 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 1467702
Query: 91 atgca 95
|||||
Sbjct: 1467703 atgca 1467707
Score = 60.0 bits (30), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 1491845 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 1491904
Query: 91 atgca 95
|||||
Sbjct: 1491905 atgca 1491909
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 1460803 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 1460862
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 1460863 tcctcattcgatcttgcgct 1460882
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 1460607 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 1460666
Query: 355 aacccgaacaaggt 368
|||||||| |||||
Sbjct: 1460667 aacccgaataaggt 1460680
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 1457981 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 1458040
Query: 90 gatgcagacnnttttc 105
||||||||| |||||
Sbjct: 1458041 gatgcagactcttttc 1458056
Score = 75.8 bits (38), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1465364 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 1465423
Query: 91 atgca 95
|||||
Sbjct: 1465424 atgca 1465428
Score = 60.0 bits (30), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 1489566 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 1489625
Query: 91 atgca 95
|||||
Sbjct: 1489626 atgca 1489630
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 1458524 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 1458583
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 1458584 tcctcattcgatcttgcgct 1458603
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 295 ctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactccttcagt 354
||||||||||| ||||| || ||||| || | || || ||||| |||||||| || |||
Sbjct: 1458328 ctgggatcaactgccactgttctcacatccagtaatgtgatggatgagaactcttttagt 1458387
Query: 355 aacccgaacaaggt 368
|||||||| |||||
Sbjct: 1458388 aacccgaataaggt 1458401
>gb|CB645438.1|CB645438 OSJNEb07B22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07B22 3', mRNA sequence
Length = 657
Score = 83.8 bits (42), Expect = 1e-013
Identities = 138/170 (81%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||| ||
Sbjct: 355 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaattct 296
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || ||||||
Sbjct: 295 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcag 236
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgct 458
||||| |||||||| ||||||||||| ||| || | |||||||| |||||
Sbjct: 235 atgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgct 186
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||| ||||||| | ||||||| |||||||||||||| ||||| ||||| || |||||
Sbjct: 645 ccactgttcgtgaacaacaatgatcaaacgtggaacccagacgccattgtatttaactcg 586
Query: 61 tggcaacacta-tggnactcctagctactggatgcaga 97
||||| || || || |||||||| |||||||||||||
Sbjct: 585 tggcagcaatacgggaactcctagttactggatgcaga 548
>gb|CB637085.1|CB637085 OSJNEa03E01.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03E01 3', mRNA sequence
Length = 498
Score = 81.8 bits (41), Expect = 5e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 334 atggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagc 393
||||| |||||||| || ||||||||||| ||||||| || || ||||||||||| |
Sbjct: 435 atggatgagaactcttttagtaacccgaataaggttgttcctgtcaaaagccagctttcc 376
Query: 394 aacgccgcggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctg 453
|| || || ||||||||||| |||||||| ||||||||||| ||| || | ||||||||
Sbjct: 375 aatgcagcagagcagatgcaagtcacgcttgctcctcactctttctcctcattcgatctt 316
Query: 454 gcgct 458
|||||
Sbjct: 315 gcgct 311
>gb|CB671150.1|CB671150 OSJNEe04J07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04J07 3', mRNA sequence
Length = 779
Score = 81.8 bits (41), Expect = 5e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 334 atggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagc 393
||||| |||||||| || ||||||||||| ||||||| || || ||||||||||| |
Sbjct: 569 atggatgagaactcttttagtaacccgaataaggttgttcctgtcaaaagccagctttcc 510
Query: 394 aacgccgcggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctg 453
|| || || ||||||||||| |||||||| ||||||||||| ||| || | ||||||||
Sbjct: 509 aatgcagcagagcagatgcaagtcacgcttgctcctcactctttctcctcattcgatctt 450
Query: 454 gcgct 458
|||||
Sbjct: 449 gcgct 445
>dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B08, full
insert sequence
Length = 2783
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1841 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1900
Query: 91 atgcagac 98
||||||||
Sbjct: 1901 atgcagac 1908
Score = 46.1 bits (23), Expect = 0.029
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggtcgtgaacttc 234
||||| ||||| ||||| || || ||||||| ||| |||||||||||| | || ||||||
Sbjct: 1985 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaagatagtaaacttc 2044
Query: 235 ggg 237
|||
Sbjct: 2045 ggg 2047
>dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E09, full
insert sequence
Length = 3254
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1650 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1709
Query: 91 atgcagac 98
||||||||
Sbjct: 1710 atgcagac 1717
Score = 46.1 bits (23), Expect = 0.029
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggtcgtgaacttc 234
||||| ||||| ||||| || || ||||||| ||| |||||||||||| | || ||||||
Sbjct: 1794 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaagatagtaaacttc 1853
Query: 235 ggg 237
|||
Sbjct: 1854 ggg 1856
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 81.8 bits (41), Expect = 5e-013
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 64609 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 64550
Query: 90 gatgcagacnnttttccg 107
||||||||| |||||||
Sbjct: 64549 gatgcagactcttttccg 64532
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 56075 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 56016
Query: 91 atgcagac 98
||||||||
Sbjct: 56015 atgcagac 56008
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 64065 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 64006
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 64005 tcctcattcgatcttgcgct 63986
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 64267 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 64208
Query: 349 ttcagtaacccgaacaaggt 368
|| ||||||||||| |||||
Sbjct: 64207 tttagtaacccgaataaggt 64188
Score = 44.1 bits (22), Expect = 0.11
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggt 224
||||| ||||| ||||| || || ||||||| ||| ||||||||||||||
Sbjct: 55931 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaaggt 55882
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1373095 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1373154
Query: 91 atgcagac 98
||||||||
Sbjct: 1373155 atgcagac 1373162
Score = 81.8 bits (41), Expect = 5e-013
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 1364561 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 1364620
Query: 90 gatgcagacnnttttccg 107
||||||||| |||||||
Sbjct: 1364621 gatgcagactcttttccg 1364638
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 1365105 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 1365164
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 1365165 tcctcattcgatcttgcgct 1365184
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 1364903 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 1364962
Query: 349 ttcagtaacccgaacaaggt 368
|| ||||||||||| |||||
Sbjct: 1364963 tttagtaacccgaataaggt 1364982
Score = 44.1 bits (22), Expect = 0.11
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggt 224
||||| ||||| ||||| || || ||||||| ||| ||||||||||||||
Sbjct: 1373239 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaaggt 1373288
>gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023900, whole
genome shotgun sequence
Length = 102266
Score = 81.8 bits (41), Expect = 5e-013
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 15649 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 15590
Query: 90 gatgcagacnnttttccg 107
||||||||| |||||||
Sbjct: 15589 gatgcagactcttttccg 15572
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 7114 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 7055
Query: 91 atgcagac 98
||||||||
Sbjct: 7054 atgcagac 7047
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 15307 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 15248
Query: 349 ttcagtaacccgaacaaggt 368
|| ||||||||||| |||||
Sbjct: 15247 tttagtaacccgaataaggt 15228
Score = 46.1 bits (23), Expect = 0.029
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| |||||| |||| |||
Sbjct: 15105 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctaactctttc 15046
Query: 439 accgccttcgatctggcgc 457
|| | |||||||| ||||
Sbjct: 15045 tcctcattcgatcttgcgc 15027
Score = 44.1 bits (22), Expect = 0.11
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggt 224
||||| ||||| ||||| || || ||||||| ||| ||||||||||||||
Sbjct: 6970 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaaggt 6921
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1298213 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1298272
Query: 91 atgcagac 98
||||||||
Sbjct: 1298273 atgcagac 1298280
Score = 81.8 bits (41), Expect = 5e-013
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 1289678 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 1289737
Query: 90 gatgcagacnnttttccg 107
||||||||| |||||||
Sbjct: 1289738 gatgcagactcttttccg 1289755
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 1290020 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 1290079
Query: 349 ttcagtaacccgaacaaggt 368
|| ||||||||||| |||||
Sbjct: 1290080 tttagtaacccgaataaggt 1290099
Score = 46.1 bits (23), Expect = 0.029
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| |||||| |||| |||
Sbjct: 1290222 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctaactctttc 1290281
Query: 439 accgccttcgatctggcgc 457
|| | |||||||| ||||
Sbjct: 1290282 tcctcattcgatcttgcgc 1290300
Score = 44.1 bits (22), Expect = 0.11
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggt 224
||||| ||||| ||||| || || ||||||| ||| ||||||||||||||
Sbjct: 1298357 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaaggt 1298406
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1298213 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1298272
Query: 91 atgcagac 98
||||||||
Sbjct: 1298273 atgcagac 1298280
Score = 81.8 bits (41), Expect = 5e-013
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 1289678 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 1289737
Query: 90 gatgcagacnnttttccg 107
||||||||| |||||||
Sbjct: 1289738 gatgcagactcttttccg 1289755
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 1290020 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 1290079
Query: 349 ttcagtaacccgaacaaggt 368
|| ||||||||||| |||||
Sbjct: 1290080 tttagtaacccgaataaggt 1290099
Score = 46.1 bits (23), Expect = 0.029
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| |||||| |||| |||
Sbjct: 1290222 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctaactctttc 1290281
Query: 439 accgccttcgatctggcgc 457
|| | |||||||| ||||
Sbjct: 1290282 tcctcattcgatcttgcgc 1290300
Score = 44.1 bits (22), Expect = 0.11
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggt 224
||||| ||||| ||||| || || ||||||| ||| ||||||||||||||
Sbjct: 1298357 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaaggt 1298406
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1373094 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1373153
Query: 91 atgcagac 98
||||||||
Sbjct: 1373154 atgcagac 1373161
Score = 81.8 bits (41), Expect = 5e-013
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 1364560 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 1364619
Query: 90 gatgcagacnnttttccg 107
||||||||| |||||||
Sbjct: 1364620 gatgcagactcttttccg 1364637
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 1365104 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 1365163
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 1365164 tcctcattcgatcttgcgct 1365183
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 1364902 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 1364961
Query: 349 ttcagtaacccgaacaaggt 368
|| ||||||||||| |||||
Sbjct: 1364962 tttagtaacccgaataaggt 1364981
Score = 44.1 bits (22), Expect = 0.11
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggt 224
||||| ||||| ||||| || || ||||||| ||| ||||||||||||||
Sbjct: 1373238 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaaggt 1373287
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 81.8 bits (41), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 1373094 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1373153
Query: 91 atgcagac 98
||||||||
Sbjct: 1373154 atgcagac 1373161
Score = 81.8 bits (41), Expect = 5e-013
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| ||||| ||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 1364560 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 1364619
Query: 90 gatgcagacnnttttccg 107
||||||||| |||||||
Sbjct: 1364620 gatgcagactcttttccg 1364637
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 379 aaaagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||||| ||| || || ||||||||||| |||||||| ||||||||||| |||
Sbjct: 1365104 aaaagccagctttccaatgcagcagagcagatgcaagtcacgcttgctcctcactctttc 1365163
Query: 439 accgccttcgatctggcgct 458
|| | |||||||| |||||
Sbjct: 1365164 tcctcattcgatcttgcgct 1365183
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 1364902 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 1364961
Query: 349 ttcagtaacccgaacaaggt 368
|| ||||||||||| |||||
Sbjct: 1364962 tttagtaacccgaataaggt 1364981
Score = 44.1 bits (22), Expect = 0.11
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggt 224
||||| ||||| ||||| || || ||||||| ||| ||||||||||||||
Sbjct: 1373238 tctgcaatcacctggcaagacgctgagaatacctttctgagagtgaaggt 1373287
>dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067L10, full
insert sequence
Length = 2367
Score = 79.8 bits (40), Expect = 2e-012
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
||||||||||||| || ||||| | || |||||||| || || |||||||||||||||
Sbjct: 1704 ccactcttcgtgaatgaaaatgatcgcacctggaacccagatgcaattgtcttcaactcc 1763
Query: 61 tggcaacactatggnactcctagctactggatgca 95
|||||||| ||||| |||||||| || ||||||||
Sbjct: 1764 tggcaacagtatggaactcctagttattggatgca 1798
>gb|CB663675.1|CB663675 OSJNEd08P02.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08P02 5', mRNA sequence
Length = 553
Score = 75.8 bits (38), Expect = 3e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 289 aacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaactcc 348
||||| ||||||||||| ||||| || |||| || |||| || ||||| ||||||||
Sbjct: 190 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 249
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|| ||||||||||| ||||||| || || ||||||||||| ||| || || |||||
Sbjct: 250 tttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagagcat 309
Query: 409 atgcaggtcacgctggctcctcactc 434
||||| |||||||| |||||||||||
Sbjct: 310 atgcaagtcacgcttgctcctcactc 335
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 968,453
Number of Sequences: 438736
Number of extensions: 968453
Number of successful extensions: 4216
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 74
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3906
Number of HSP's gapped (non-prelim): 305
length of query: 798
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 777
effective length of database: 2,791,206,460
effective search space: 2168767419420
effective search space used: 2168767419420
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)